Vigun01g142400.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.559e-27 Identity = 71/122 (58.20%), Postives = 87/122 (71.31%), Query Frame = 1 Query: 31 NAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGHTTPN---NPNIFSTSQTLHSFSGGEGSSQQHRNGAATFELEYLDNKLLEELLEA 387
+ + R+RG+R+RPWGKFAAEIRDP+R GAR+WLGTF+TAEEAARAYD AAF RGH AILNFPNEY + P S+S + S S S+Q N FE EYLD+K+LEELL++
Sbjct: 15 DKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNEYYPRMDDYSLRPPYASSSSSSSSGSTSTNVSRQ--NQREVFEFEYLDDKVLEELLDS 134
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF97_ARATH (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.058e-20 Identity = 57/114 (50.00%), Postives = 74/114 (64.91%), Query Frame = 1 Query: 43 RYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGHTTPNNPNIFSTSQTLHSFSGGEGSSQQHRNGAATFELEYLDNKLLEELLE 384
+YRG+R+RPWGK+AAEIRD + G R+WLGTFDTAE+AARAYD AA+ RG AILNFP+EY T ++ ++S + FE EYLD+ +L+ELLE
Sbjct: 19 KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDAARAYDRAAYSMRGKAAILNFPHEYNMGTGSSSTAANSSSSSQQ----------------VFEFEYLDDSVLDELLE 116
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 5.358e-20 Identity = 50/71 (70.42%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 19 VVSGNAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYG 231
VV N + YRG+R+RPWGK+AAEIRDP +KG R+WLGTFDTA EAAR YD AAF+ RG KAILNFP E G
Sbjct: 63 VVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAG 133
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.800e-19 Identity = 61/121 (50.41%), Postives = 76/121 (62.81%), Query Frame = 1 Query: 4 EGGRGVVSGNAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGHTTPNNPNIFSTSQTLHSFSGGEGSSQQHRNGAATFELEYLDNKL 366
+GGRGV G +YRG+R+RPWGK+AAEIRD + G R+WLGTFDTAEEAARAYD AA+ RG AILNFP+EY + + + + S S S Q FE EYLD+ +
Sbjct: 3 QGGRGV--GAEHGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQ-------VFEFEYLDDSV 114
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.834e-19 Identity = 48/64 (75.00%), Postives = 57/64 (89.06%), Query Frame = 1 Query: 37 EVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEY 228
E++YRG+RKRPWGK+AAEIRD R GAR+WLGTF+TAE+AARAYD AAF RG +AILNFP+EY
Sbjct: 11 EMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFPHEY 74
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana OX=3702 GN=ERF5 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 7.543e-19 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1 Query: 22 VSGNAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGHTTP 243
VS + YRG+R+RPWGKFAAEIRDP ++G+R+WLGTFDTA EAARAYD AAFR RG KAILNFP E G P
Sbjct: 148 VSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKP 221
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris OX=4096 GN=ERF5 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 1.764e-18 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 1 Query: 46 YRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGH 234
YRG+R+RPWGKFAAEIRDP RKG R+WLGTFDTA EAA+AYD AA++ RG KAI+NFP E +
Sbjct: 138 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVAN 200
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=ERF6 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 2.240e-18 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = 1 Query: 19 VVSGNAEVRYRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGHTTP 243
VV+ + YRG+R RPWGKFAAEIRDPTR+G R+WLGTF+TA EAARAYD AFR RG KAILNFP E P
Sbjct: 128 VVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNP 202
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum OX=4097 GN=ERF5 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.118e-18 Identity = 47/63 (74.60%), Postives = 54/63 (85.71%), Query Frame = 1 Query: 46 YRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYGH 234
YRG+R+RPWGKFAAEIRDP RKG R+WLGTFDTA EAA+AYD AAF+ RG KAI+NFP E +
Sbjct: 145 YRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVAN 207
BLAST of Vigun01g142400.1 vs. DB:Swiss
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.672e-18 Identity = 46/69 (66.67%), Postives = 57/69 (82.61%), Query Frame = 1 Query: 46 YRGIRKRPWGKFAAEIRDPTRKGARIWLGTFDTXXXXXXXXXXXXXXXXGHKAILNFPNEYG-HTTPNN 249
YRG+R+RPWGKFAAEIRDP +KG+RIWLGTF++ +AARAYD AAF+ RG KA+LNFP + G + P N
Sbjct: 110 YRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPAN 178 The following BLAST results are available for this feature:
BLAST of Vigun01g142400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g142400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g142400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g142400.1; organism=Vigna unguiculata; type=mRNA; length=1047bpback to top protein sequence of Vigun01g142400.1_Vu_IT97K-499-35_v1.1 >Vigun01g142400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g142400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g142400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=139bpback to top mRNA from alignment at Vu01:32337630..32338676- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g142400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g142400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g142400.1; organism=Vigna unguiculata; type=mRNA; length=1047bp; location=Sequence derived from: Vu01:32337630..32338676- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:32337630..32338676- >Vigun01g142400.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g142400.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g142400.1; organism=Vigna unguiculata; type=CDS; length=417bp; location=Sequence derived from: Vu01:32337630..32338676- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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