Vigun01g162100.1

Transcript Overview
NameVigun01g162100.1
Unique NameVigun01g162100.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1592
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:34401453..34403403 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR021Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR039Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL199Pisum sativum Cameor genome v1aPisum sativum
crvuL002Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL525Pisum sativum Cameor genome v1aPisum sativum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL573Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL583Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL163Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0232Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0244Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL459Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0855Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0990Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0128Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0547Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0864Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1153Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL092Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL331Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL332Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL340Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL579Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR035Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR043Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL123Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL116Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL343Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL319Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR033Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL423Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL041Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL287Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL004Cicer arietinum
carvuL159Cicer arietinum
carvuL236Cicer arietinum
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL188Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL356Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR015Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR047Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR057Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR000Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR010Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR060Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL449Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL489Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL537Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL468Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL544Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL122Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL406Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL495Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR031Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
XM_058920973.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_03277.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va02G048320.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan02g135000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.06G177500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058882127.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr01.1001222Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_06G01172.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr07.1000969Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Psat05G0776900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_17470Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_07784.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg32079.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004506000.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan05g175900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.04G331900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Tiffany.R1.1g026040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vum_08G01596.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g038160.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_00703Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_004494007.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr07.2235Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.06G156700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va08G061100.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vigan.08G202500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_07969.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
evm.model.Chr01.1552Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr11.1000529Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-KK1_022210Cajanus cajan Asha genome v1.0Cajanus cajan
Va03G073380.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Psat3g042200.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.08G176700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_07G00532.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat03G0158700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr05.856Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.5g139400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigst.04G213600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.001G179400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.07G049400.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_010142Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014639953.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Cr_01409.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cc_v2.0_09466.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan08g148200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vum_04G02398.1Vigna umbellata FF25 genome v1.0Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g072200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g072200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g162100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun05g245000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g162100Vigun01g162100_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g162100.1_Vu_IT97K-499-35_v1.1Vigun01g162100.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun01g162100.1Vigun01g162100.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g162100.1.v1.1.CDS.3Vigun01g162100.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g162100.1.v1.1.CDS.2Vigun01g162100.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun01g162100.1.v1.1.CDS.1Vigun01g162100.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g162100.1.v1.1.three_prime_UTR.1Vigun01g162100.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g162100.1.v1.1.five_prime_UTR.1Vigun01g162100.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.737e-74
Identity = 104/119 (87.39%), Postives = 113/119 (94.96%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMA 357
            MGRAPCCDKANVKKGPWSPEED KLKDYID++GTGGNWIALPQK+GLKRCGKSCRLRWLNYLRPNIKHG FS+ ED+II SL+ SIGSRWSIIA+QLPGRTDNDIKNYWNTKLKKK++ 
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDRIILSLYISIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLLG 119
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 6.323e-73
Identity = 105/130 (80.77%), Postives = 117/130 (90.00%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASPQKKPLQ 390
            MGRAPCCDKANVKKGPWSPEEDAKLK YI+  GTGGNWIALPQK+GLKRCGKSCRLRWLNYLRPNIKHG FS+ E+ IICSL+ +IGSRWSIIA+QLPGRTDNDIKNYWNT+LKKK++    + Q+K LQ
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLI----NKQRKELQ 126
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.004e-71
Identity = 101/124 (81.45%), Postives = 112/124 (90.32%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASP 372
            MGRAPCCDKANVK+GPWSPEEDAKLKDYI++ GTGGNWIALP K GL+RCGKSCRLRWLNYLRPNI+HG F++ ED II SLFASIGSRWS+IA+ L GRTDNDIKNYWNTKLKKK++A  A P
Sbjct:    1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATMAPP 124
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 3.601e-69
Identity = 95/119 (79.83%), Postives = 109/119 (91.60%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMA 357
            MGRAPCCDK  VKKGPWS EEDA LK YI++HGTG NWI+LPQ++G+KRCGKSCRLRWLNYLRPN+KHG F+D ED IICSL+ +IGSRWSIIASQLPGRTDNDIKNYWNT+LKKK+++
Sbjct:    1 MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLNYLRPNLKHGGFTDEEDYIICSLYITIGSRWSIIASQLPGRTDNDIKNYWNTRLKKKLLS 119
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 1.993e-67
Identity = 93/118 (78.81%), Postives = 108/118 (91.53%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMM 354
            MGRAPCCDK  VK+GPWSPEED+KL+DYI+++G GGNWI+ P K GL+RCGKSCRLRWLNYLRPNIKHG FS+ ED+II SLFA+IGSRWSIIA+ LPGRTDNDIKNYWNTKL+KK++
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLL 118
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana OX=3702 GN=MYB80 PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 6.690e-56
Identity = 82/124 (66.13%), Postives = 99/124 (79.84%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASP 372
            MGR PCC+K NVK+G W+PEED KL  YI QHGT  NW  +P+  GL+RCGKSCRLRW NYLRP++KHGQFS+AE+ II    + +G+RWS+IA+QLPGRTDND+KNYWNTKLKKK+  M   P
Sbjct:    1 MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTR-NWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGQFSEAEEHIIVKFHSVLGNRWSLIAAQLPGRTDNDVKNYWNTKLKKKLSGMGIDP 123
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB80_ORYSJ (Transcription factor MYB80 OS=Oryza sativa subsp. japonica OX=39947 GN=MYB80 PE=2 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 1.868e-53
Identity = 79/124 (63.71%), Postives = 100/124 (80.65%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASP 372
            MGR PCC+K NVK+G W+PEED KL  YI Q+GT  NW  +P+  GL+RCGKSCRLRW NYLRP++KHG+F+DAE++ I  L + +G+RWS+IA+QLPGRTDND+KN+WNTKLKKK+  M   P
Sbjct:    1 MGRVPCCEKDNVKRGQWTPEEDNKLLSYITQYGTR-NWRLIPKNAGLQRCGKSCRLRWTNYLRPDLKHGEFTDAEEQTIIKLHSVVGNRWSVIAAQLPGRTDNDVKNHWNTKLKKKLSGMGIDP 123
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MY106_ARATH (Transcription factor MYB106 OS=Arabidopsis thaliana OX=3702 GN=MYB106 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.350e-52
Identity = 78/124 (62.90%), Postives = 99/124 (79.84%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASP 372
            MGR+PCCDKA +KKGPW+PEED KL  YI++HG G +W +LP+K GL+RCGKSCRLRW NYLRP+IK G+F+  E++ I  L A +G+RWS IA+ LP RTDN+IKNYWNT LKK+++ M   P
Sbjct:    1 MGRSPCCDKAGLKKGPWTPEEDQKLLAYIEEHGHG-SWRSLPEKAGLQRCGKSCRLRWTNYLRPDIKRGKFTVQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLIKMGIDP 123
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB16_ARATH (Transcription factor MYB16 OS=Arabidopsis thaliana OX=3702 GN=MYB16 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.051e-51
Identity = 77/124 (62.10%), Postives = 97/124 (78.23%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASP 372
            MGR+PCCDK  +KKGPW+PEED KL  YI++HG G +W +LP+K GL RCGKSCRLRW NYLRP+IK G+F+  E++ I  L A +G+RWS IA+ LP RTDN+IKNYWNT LKK+++ M   P
Sbjct:    1 MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHG-SWRSLPEKAGLHRCGKSCRLRWTNYLRPDIKRGKFNLQEEQTIIQLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLKKRLVKMGIDP 123
[Close]
BLAST of Vigun01g162100.1 vs. DB:Swiss
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 3.025e-50
Identity = 73/125 (58.40%), Postives = 97/125 (77.60%), Query Frame = 1 
Query:    1 MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMAMNASPQ 375
            MGR+PCC+KA+  KG W+ EED +L DYI  HG G  W +LP+  GL RCGKSCRLRW+NYLRP++K G F+D ED+II  L + +G++WS+IA +LPGRTDN+IKNYWNT +K+K+++    PQ
Sbjct:    1 MGRSPCCEKAHTNKGAWTKEEDQRLVDYIRNHGEGC-WRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTDDEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKLLSHGIDPQ 124
The following BLAST results are available for this feature:
BLAST of Vigun01g162100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
MYB36_ARATH1.737e-7487.39Transcription factor MYB36 OS=Arabidopsis thaliana... [more]
RAX3_ARATH6.323e-7380.77Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
RAX2_ARATH1.004e-7181.45Transcription factor RAX2 OS=Arabidopsis thaliana ... [more]
MYB87_ARATH3.601e-6979.83Transcription factor MYB87 OS=Arabidopsis thaliana... [more]
RAX1_ARATH1.993e-6778.81Transcription factor RAX1 OS=Arabidopsis thaliana ... [more]
MYB80_ARATH6.690e-5666.13Transcription factor MYB80 OS=Arabidopsis thaliana... [more]
MYB80_ORYSJ1.868e-5363.71Transcription factor MYB80 OS=Oryza sativa subsp. ... [more]
MY106_ARATH1.350e-5262.90Transcription factor MYB106 OS=Arabidopsis thalian... [more]
MYB16_ARATH1.051e-5162.10Transcription factor MYB16 OS=Arabidopsis thaliana... [more]
MYB6_ARATH3.025e-5058.40Transcription repressor MYB6 OS=Arabidopsis thalia... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..64
e-value: 1.1E-12
score: 58.1
coord: 67..115
e-value: 2.9E-10
score: 50.1
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 69..111
e-value: 8.3E-10
score: 38.7
coord: 14..62
e-value: 1.8E-14
score: 53.6
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 71..113
e-value: 1.06473E-7
score: 45.6442
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 16..62
e-value: 7.94149E-10
score: 51.4222
NoneNo IPR availableGENE3D1.10.10.60coord: 7..68
e-value: 6.0E-20
score: 72.8
NoneNo IPR availableGENE3D1.10.10.60coord: 69..131
e-value: 1.3E-17
score: 65.5
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 67..117
score: 15.988
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 9..66
score: 21.464
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 11..109

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g162100.1; organism=Vigna unguiculata; type=mRNA; length=1592bp
AAATTGTGACCAAGTTAAACTCCTTCTTACAAAAGGGTCCTTGTAAAAGG
CTGATAGAACCTTCTATAGGCTAATCAATGATATATAATTTTGGAAACTG
ACAAGACAATTGAAGTTACAGAGGCTGTTCCCTTTGACTTGTGCCATTTC
TTATCTGAATAAACTTCTATTCATGCCCCTCTCCCACGTTCCATTCTTCA
CTATCCTTCTACTTCATACCTTTCTCACAATCCCAGAGAAACATCCATGG
GTAGAGCTCCTTGCTGTGACAAGGCAAATGTAAAGAAAGGGCCATGGTCA
CCAGAAGAAGATGCAAAGCTAAAGGACTACATAGACCAACATGGCACCGG
AGGGAATTGGATTGCGCTCCCCCAAAAAGTTGGTTTGAAAAGATGTGGCA
AGAGCTGTCGATTAAGGTGGCTTAATTATCTTAGACCCAACATTAAGCAC
GGTCAATTTTCTGATGCAGAAGATAAAATAATCTGTAGCCTCTTCGCTAG
CATTGGAAGCAGGTGGTCCATAATAGCATCTCAGCTGCCAGGGAGGACTG
ACAATGATATCAAGAACTACTGGAACACGAAGCTTAAGAAGAAAATGATG
GCCATGAATGCTTCTCCCCAGAAGAAGCCTCTTCAAATCACCCTTTTATC
CATCCTTGAAAGCTCAACACCATCTTCATCACCATTGTCATTCAGAGACA
CCACCAACTCATACTACCATCCCCACGCTTCTTTCACAGGCGTTGCCTCC
TTTTCCTACTCTTCTGCTTCTGCTGATTCCTTCTTTCAAGCACAAGAGAG
TTTCATGGACCCAACCCAGAAGTGCCAATTCAAAGATAGCACCAACAACA
CCATGTTTGTGTTCGGTGGTGAAGCCACGGCCACTAGTTGCAGCTCTTCT
GATGCGAGCTGCAACAACCAGATCAGCCAAATCATGGAGCCAGAATTTGG
CGAGGCTAGCTTTGTGGAGCAGATAGGTGTTGCTGCTGATAATCCCCTCT
ACAGTGGTGGCAGTGCTAGTGTTAGTGGGTGGACAGACAAACAAAATGGA
TTGTGGGAACAAAATCCGTTGGATTATTATGGTCTAGAGGAAATTAAACA
GCTAATTAGCACTAATAACAGTTTTAACAACTTTTTGTTTGATGATAAGA
AGACACAAGAAAGGGTCACGTATTACTGATGCTGACTCTGGTTACAACAA
CATCTCAGACTTGTGCCTTTGTGGGGTGGGTTTTTAGTTTTTACTATCTA
GTATTCATCAATATAACCACTTTCTTTGTTTCATACTACATTGTAAAAGC
TTCCTTTTTTTTCTTTCTGCAGTTCCCTTTGCCAAGGCAACCTTATAATT
AACGATGTCCTAAAACACCAACCATGTTATCCCTTTATCTTCGAAACATC
ATAGTTCAGTAATATATTTATCGTGTATCGATCGCATGCATTATCTATTA
TTATAAAGTCAATCAAGCACCTAAAAGCACAAACACCGATGTGCTTAATG
CTCAATTATTGAAGTGTTGATTATTATGAGATTACGATCGCAACATAAAG
TTGGCTAGAGTTTGTAAAATTGAGCATGTTACAGTGACCTAC
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protein sequence of Vigun01g162100.1_Vu_IT97K-499-35_v1.1

>Vigun01g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g162100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=311bp
MGRAPCCDKANVKKGPWSPEEDAKLKDYIDQHGTGGNWIALPQKVGLKRC
GKSCRLRWLNYLRPNIKHGQFSDAEDKIICSLFASIGSRWSIIASQLPGR
TDNDIKNYWNTKLKKKMMAMNASPQKKPLQITLLSILESSTPSSSPLSFR
DTTNSYYHPHASFTGVASFSYSSASADSFFQAQESFMDPTQKCQFKDSTN
NTMFVFGGEATATSCSSSDASCNNQISQIMEPEFGEASFVEQIGVAADNP
LYSGGSASVSGWTDKQNGLWEQNPLDYYGLEEIKQLISTNNSFNNFLFDD
KKTQERVTYY*
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mRNA from alignment at Vu01:34401453..34403403-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g162100.1; organism=Vigna unguiculata; type=mRNA; length=1951bp; location=Sequence derived from: Vu01:34401453..34403403- (Vigna unguiculata
AAATTGTGACCAAGTTAAACTCCTTCTTACAAAAGGGTCCTTGTAAAAGG
CTGATAGAACCTTCTATAGGCTAATCAATGATATATAATTTTGGAAACTG
ACAAGACAATTGAAGTTACAGAGGCTGTTCCCTTTGACTTGTGCCATTTC
TTATCTGAATAAACTTCTATTCATGCCCCTCTCCCACGTTCCATTCTTCA
CTATCCTTCTACTTCATACCTTTCTCACAATCCCAGAGAAACATCCATGG
GTAGAGCTCCTTGCTGTGACAAGGCAAATGTAAAGAAAGGGCCATGGTCA
CCAGAAGAAGATGCAAAGCTAAAGGACTACATAGACCAACATGGCACCGG
AGGGAATTGGATTGCGCTCCCCCAAAAAGTTGGTAAGTGCATACATACTA
CAAACATCATCACTCATCTCATCATGATACCCCTTTGTGTTTCTGTTCCT
GTTCCTGATTTTGTTTCTTTATCGCAGGTTTGAAAAGATGTGGCAAGAGC
TGTCGATTAAGGTGGCTTAATTATCTTAGACCCAACATTAAGCACGGTCA
ATTTTCTGATGCAGAAGATAAAATAATCTGTAGCCTCTTCGCTAGCATTG
GAAGCAGGTACACTCAATTTCTCACTTGTCAGAGGCTTTATCTTTACCAA
ACCGTACAAATAATTTCCTTACCAAGAAACAGTGGGAAGCATTTTTTAAG
GTTGTTTATGTTTTTGGTTTTCAGTTTTGGGAAATAGAACATGTTAAGTA
CGATAGAGAGAGATACGATGTGTACTTTGATTTTAGATGTTGTGCATCGG
TTGATGCATTCGAATTTAGATCTGGTGTGAGTAAGATTCTTATGGTGGGA
AGACATTTTGACTGAGTGCAGGTGGTCCATAATAGCATCTCAGCTGCCAG
GGAGGACTGACAATGATATCAAGAACTACTGGAACACGAAGCTTAAGAAG
AAAATGATGGCCATGAATGCTTCTCCCCAGAAGAAGCCTCTTCAAATCAC
CCTTTTATCCATCCTTGAAAGCTCAACACCATCTTCATCACCATTGTCAT
TCAGAGACACCACCAACTCATACTACCATCCCCACGCTTCTTTCACAGGC
GTTGCCTCCTTTTCCTACTCTTCTGCTTCTGCTGATTCCTTCTTTCAAGC
ACAAGAGAGTTTCATGGACCCAACCCAGAAGTGCCAATTCAAAGATAGCA
CCAACAACACCATGTTTGTGTTCGGTGGTGAAGCCACGGCCACTAGTTGC
AGCTCTTCTGATGCGAGCTGCAACAACCAGATCAGCCAAATCATGGAGCC
AGAATTTGGCGAGGCTAGCTTTGTGGAGCAGATAGGTGTTGCTGCTGATA
ATCCCCTCTACAGTGGTGGCAGTGCTAGTGTTAGTGGGTGGACAGACAAA
CAAAATGGATTGTGGGAACAAAATCCGTTGGATTATTATGGTCTAGAGGA
AATTAAACAGCTAATTAGCACTAATAACAGTTTTAACAACTTTTTGTTTG
ATGATAAGAAGACACAAGAAAGGGTCACGTATTACTGATGCTGACTCTGG
TTACAACAACATCTCAGACTTGTGCCTTTGTGGGGTGGGTTTTTAGTTTT
TACTATCTAGTATTCATCAATATAACCACTTTCTTTGTTTCATACTACAT
TGTAAAAGCTTCCTTTTTTTTCTTTCTGCAGTTCCCTTTGCCAAGGCAAC
CTTATAATTAACGATGTCCTAAAACACCAACCATGTTATCCCTTTATCTT
CGAAACATCATAGTTCAGTAATATATTTATCGTGTATCGATCGCATGCAT
TATCTATTATTATAAAGTCAATCAAGCACCTAAAAGCACAAACACCGATG
TGCTTAATGCTCAATTATTGAAGTGTTGATTATTATGAGATTACGATCGC
AACATAAAGTTGGCTAGAGTTTGTAAAATTGAGCATGTTACAGTGACCTA
C
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Coding sequence (CDS) from alignment at Vu01:34401453..34403403-

>Vigun01g162100.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g162100.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g162100.1; organism=Vigna unguiculata; type=CDS; length=933bp; location=Sequence derived from: Vu01:34401453..34403403- (Vigna unguiculata
ATGGGTAGAGCTCCTTGCTGTGACAAGGCAAATGTAAAGAAAGGGCCATG
GTCACCAGAAGAAGATGCAAAGCTAAAGGACTACATAGACCAACATGGCA
CCGGAGGGAATTGGATTGCGCTCCCCCAAAAAGTTGGTTTGAAAAGATGT
GGCAAGAGCTGTCGATTAAGGTGGCTTAATTATCTTAGACCCAACATTAA
GCACGGTCAATTTTCTGATGCAGAAGATAAAATAATCTGTAGCCTCTTCG
CTAGCATTGGAAGCAGGTGGTCCATAATAGCATCTCAGCTGCCAGGGAGG
ACTGACAATGATATCAAGAACTACTGGAACACGAAGCTTAAGAAGAAAAT
GATGGCCATGAATGCTTCTCCCCAGAAGAAGCCTCTTCAAATCACCCTTT
TATCCATCCTTGAAAGCTCAACACCATCTTCATCACCATTGTCATTCAGA
GACACCACCAACTCATACTACCATCCCCACGCTTCTTTCACAGGCGTTGC
CTCCTTTTCCTACTCTTCTGCTTCTGCTGATTCCTTCTTTCAAGCACAAG
AGAGTTTCATGGACCCAACCCAGAAGTGCCAATTCAAAGATAGCACCAAC
AACACCATGTTTGTGTTCGGTGGTGAAGCCACGGCCACTAGTTGCAGCTC
TTCTGATGCGAGCTGCAACAACCAGATCAGCCAAATCATGGAGCCAGAAT
TTGGCGAGGCTAGCTTTGTGGAGCAGATAGGTGTTGCTGCTGATAATCCC
CTCTACAGTGGTGGCAGTGCTAGTGTTAGTGGGTGGACAGACAAACAAAA
TGGATTGTGGGAACAAAATCCGTTGGATTATTATGGTCTAGAGGAAATTA
AACAGCTAATTAGCACTAATAACAGTTTTAACAACTTTTTGTTTGATGAT
AAGAAGACACAAGAAAGGGTCACGTATTACTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR017930Myb_dom
IPR009057Homeodomain-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding