Vigun01g180500.1

Transcript Overview
NameVigun01g180500.1
Unique NameVigun01g180500.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length759
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:36142751..36143509 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR019Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR026Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL194Pisum sativum Cameor genome v1aPisum sativum
crvuL003Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL474Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL006Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0225Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL260Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0474Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0655Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0866Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1026Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1154Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL327Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL406Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL575Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR037Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR043Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL121Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL114Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL353Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL013Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL577Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR018Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL005Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL221Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL500Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL001Cicer arietinum
carvuL159Cicer arietinum
carvuL236Cicer arietinum
ccavuL070Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR019Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR059Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL486Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL548Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL504Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL553Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL403Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL502Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR014Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR018Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.001G196100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_04G02593.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_10902Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Va02G003690.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr07.1671Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg777.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat06G0236700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan03g249600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.04G353900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_022785000.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_014639540.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigst.04G229900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va03G076330.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_03111.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.3g028880.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.08G351000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_07979.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Hedin2.R1.3g036800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G267600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.08G242100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_14440Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-XM_012714926.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr01.1725Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr01.1001333Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_28599Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_003202Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g014800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g014800.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g180500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g180500Vigun01g180500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g180500.1Vigun01g180500.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g180500.1_Vu_IT97K-499-35_v1.1Vigun01g180500.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g180500.1.v1.1.CDS.1Vigun01g180500.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 9.593e-47
Identity = 104/257 (40.47%), Postives = 135/257 (52.53%), Query Frame = 1 
Query:   13 WKANT---VEISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKALRQAHSPVGLSDDLRPSSSVVSDGPNIDLAQVYASFLNVKPDEVQTVSPEYSSIVNTSALSEEHGRLHFHEQPRESHFGEDIEMYFCGLNSIQKHQEYSSSHDTRVTKTNFE-LPPLPGEVAETSHGNVLWSNSEMMVDH--------ALQATQWPLL--GPEAYDADFFMGNCWSHFDFPRDA 741
            W+ N     EI+P+CPRCGSSNTKFCYYNNYS TQPRYFCKGCRRYWTKGGSLRNVP+GGGCRKSRR K +       S    S +    S      P+IDLA VYA+FLN KPDE  ++  E   +  T  L +          P  +       M      +   H  Y +  +  V +  +  LPP PGE   +   N +WS++ +++ H         +QA   P++    E+ D+   +   WS FDF  D 
Sbjct:   13 WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGNNTKTSLTANSGNPGGGS------PSIDLALVYANFLNPKPDE--SILQENCDLATTDFLVD---------NPTGTSMDPSWSMDI----NDGHHDHYINPVEHIVEECGYNGLPPFPGEELLSLDTNGVWSDA-LLIGHNHVDVGVTPVQAVHEPVVHFADESNDSTNLLFGSWSPFDFTADG 247
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 2.382e-34
Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 1 
Query:   37 SPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRK---SRRGKYNKALRQAHSPVGL--SDDLRPSSSVVSDGPNIDLAQVYASFL 333
            +P CPRC SSNTKFCYYNNYS +QPRYFCKGCRRYWTKGGSLRN+P+GGGCRK   SR+  + +  R  + P GL   DD   SS   SD   IDLA V+A ++
Sbjct:   37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSD---IDLAAVFAQYV 137
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 3.228e-30
Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1 
Query:   31 EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKALRQAHSPVGLSDDLRPSSSV----VSDGPNIDLAQVYA 324
            E++  CPRC S+NTKFCYYNNYS TQPRYFCK CRRYWTKGG+LRN+P+GGGCRK++R   + A     +P   S D +  S+      S+  +IDL+  +A
Sbjct:   52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFA 153
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 110.923 bits (276), Expect = 9.391e-28
Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:   43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
            NCPRC S+NTKFCYYNNYS TQPRYFCKGCRRYWT+GGSLRNVP+GG  RK++R
Sbjct:   75 NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.773e-27
Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 1 
Query:   43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
            NCPRC S+NTKFCYYNNYS TQPRYFCKGCRRYWT+GGSLRN+P+GGG RK++R
Sbjct:   54 NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR 107
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.476e-27
Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 1 
Query:    4 ERGWKANTVEISP--NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKAL 225
            ER  +AN   ++    CPRC SSNTKFCYYNNY+ TQPR+FCKGCRRYWT+GG+LRNVP+GGGCR++ +   N  L
Sbjct:   63 ERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNL 138
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 6.192e-27
Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1 
Query:    1 MERGWKANTV--EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGK 210
            ++R  +AN    E +  CPRC S+NTKFCY+NNYS TQPR+FCK CRRYWT+GG+LRNVP+GGGCR++RR K
Sbjct:   74 VDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 8.340e-27
Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 1 
Query:   43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
            NCPRC S NTKFCYYNNYS +QPRYFCK CRRYWTKGG+LRNVP+GGGCR+++R
Sbjct:   49 NCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR 102
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF3_ORYSJ (Dof zinc finger protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF3 PE=1 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.038e-26
Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 1 
Query:   37 SPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
            SP CPRC S  TKFCYYNNYS  QPRYFC+ CRRYWT+GGSLRNVP+GGGCRKS+R
Sbjct:   44 SPCCPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKR 99
[Close]
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.077e-26
Identity = 60/117 (51.28%), Postives = 71/117 (60.68%), Query Frame = 1 
Query:   31 EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR-GKYNKALRQAHSPVGLSDDLR-PSSSVVSDGPNI-----DLAQVYASFLNVKPDEVQT 360
            E S  CPRC S+NTKFCYYNNYS +QPRYFCK CRRYWTKGG LRN+PIGG  RK +R     K+LR    P    D    P++S   +  NI     +L   YA  LN +P  V +
Sbjct:   37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQMELGLAYA-LLNKQPLGVSS 152
The following BLAST results are available for this feature:
BLAST of Vigun01g180500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
DOF35_ARATH9.593e-4740.47Dof zinc finger protein DOF3.5 OS=Arabidopsis thal... [more]
DOF12_ARATH2.382e-3461.54Dof zinc finger protein DOF1.2 OS=Arabidopsis thal... [more]
DOF53_ARATH3.228e-3053.92Dof zinc finger protein DOF5.3 OS=Arabidopsis thal... [more]
DOF37_ARATH9.391e-2883.33Dof zinc finger protein DOF3.7 OS=Arabidopsis thal... [more]
DOF46_ARATH1.773e-2783.33Dof zinc finger protein DOF4.6 OS=Arabidopsis thal... [more]
DOF11_ARATH4.476e-2763.16Dof zinc finger protein DOF1.1 OS=Arabidopsis thal... [more]
DOF24_ARATH6.192e-2765.28Dof zinc finger protein DOF2.4 OS=Arabidopsis thal... [more]
DOF21_ARATH8.340e-2781.48Dof zinc finger protein DOF2.1 OS=Arabidopsis thal... [more]
DOF3_ORYSJ1.038e-2680.36Dof zinc finger protein 3 OS=Oryza sativa subsp. j... [more]
DOF32_ARATH1.077e-2651.28Dof zinc finger protein DOF3.2 OS=Arabidopsis thal... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003851Zinc finger, Dof-typePFAMPF02701zf-Dofcoord: 14..68
e-value: 6.8E-31
score: 106.2
IPR003851Zinc finger, Dof-typePROSITEPS01361ZF_DOF_1coord: 16..52
IPR003851Zinc finger, Dof-typePROSITEPS50884ZF_DOF_2coord: 14..68
score: 28.192

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=mRNA; length=759bp
ATGGAGAGAGGGTGGAAGGCTAACACTGTTGAGATTTCACCAAATTGTCC
CAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGTT
CAACTCAACCACGCTACTTTTGCAAGGGCTGCAGAAGGTACTGGACCAAA
GGAGGTTCCCTCCGTAACGTACCAATTGGCGGTGGCTGCCGGAAAAGTAG
AAGGGGTAAATATAATAAAGCCCTAAGACAAGCCCATAGCCCAGTTGGGC
TTTCTGATGATTTAAGGCCTTCATCTTCAGTGGTGTCTGATGGGCCAAAT
ATCGATCTTGCACAAGTGTATGCAAGTTTTCTGAATGTGAAGCCAGATGA
AGTGCAAACAGTTTCTCCTGAGTATTCAAGCATAGTTAACACTAGTGCTT
TGTCTGAAGAGCATGGTCGTTTGCATTTTCATGAACAGCCCAGAGAATCC
CATTTTGGTGAGGATATCGAAATGTACTTTTGCGGGTTGAACTCTATCCA
GAAGCATCAGGAGTATAGTAGCAGTCATGATACAAGAGTTACAAAAACAA
ATTTTGAGTTGCCTCCATTACCAGGTGAAGTTGCAGAAACCTCACATGGT
AATGTGTTGTGGTCCAATTCTGAGATGATGGTGGATCATGCTTTGCAAGC
CACCCAATGGCCCCTTCTTGGACCAGAAGCTTATGATGCAGACTTCTTCA
TGGGTAACTGTTGGAGCCACTTCGATTTTCCAAGGGATGCTTCTTTTTCC
ACGCCTTGA
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protein sequence of Vigun01g180500.1_Vu_IT97K-499-35_v1.1

>Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=253bp
MERGWKANTVEISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTK
GGSLRNVPIGGGCRKSRRGKYNKALRQAHSPVGLSDDLRPSSSVVSDGPN
IDLAQVYASFLNVKPDEVQTVSPEYSSIVNTSALSEEHGRLHFHEQPRES
HFGEDIEMYFCGLNSIQKHQEYSSSHDTRVTKTNFELPPLPGEVAETSHG
NVLWSNSEMMVDHALQATQWPLLGPEAYDADFFMGNCWSHFDFPRDASFS
TP*
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mRNA from alignment at Vu01:36142751..36143509-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=mRNA; length=759bp; location=Sequence derived from: Vu01:36142751..36143509- (Vigna unguiculata
ATGGAGAGAGGGTGGAAGGCTAACACTGTTGAGATTTCACCAAATTGTCC
CAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGTT
CAACTCAACCACGCTACTTTTGCAAGGGCTGCAGAAGGTACTGGACCAAA
GGAGGTTCCCTCCGTAACGTACCAATTGGCGGTGGCTGCCGGAAAAGTAG
AAGGGGTAAATATAATAAAGCCCTAAGACAAGCCCATAGCCCAGTTGGGC
TTTCTGATGATTTAAGGCCTTCATCTTCAGTGGTGTCTGATGGGCCAAAT
ATCGATCTTGCACAAGTGTATGCAAGTTTTCTGAATGTGAAGCCAGATGA
AGTGCAAACAGTTTCTCCTGAGTATTCAAGCATAGTTAACACTAGTGCTT
TGTCTGAAGAGCATGGTCGTTTGCATTTTCATGAACAGCCCAGAGAATCC
CATTTTGGTGAGGATATCGAAATGTACTTTTGCGGGTTGAACTCTATCCA
GAAGCATCAGGAGTATAGTAGCAGTCATGATACAAGAGTTACAAAAACAA
ATTTTGAGTTGCCTCCATTACCAGGTGAAGTTGCAGAAACCTCACATGGT
AATGTGTTGTGGTCCAATTCTGAGATGATGGTGGATCATGCTTTGCAAGC
CACCCAATGGCCCCTTCTTGGACCAGAAGCTTATGATGCAGACTTCTTCA
TGGGTAACTGTTGGAGCCACTTCGATTTTCCAAGGGATGCTTCTTTTTCC
ACGCCTTGA
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Coding sequence (CDS) from alignment at Vu01:36142751..36143509-

>Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=CDS; length=759bp; location=Sequence derived from: Vu01:36142751..36143509- (Vigna unguiculata
ATGGAGAGAGGGTGGAAGGCTAACACTGTTGAGATTTCACCAAATTGTCC
CAGGTGTGGTTCTTCCAACACCAAGTTCTGCTACTACAACAACTACAGTT
CAACTCAACCACGCTACTTTTGCAAGGGCTGCAGAAGGTACTGGACCAAA
GGAGGTTCCCTCCGTAACGTACCAATTGGCGGTGGCTGCCGGAAAAGTAG
AAGGGGTAAATATAATAAAGCCCTAAGACAAGCCCATAGCCCAGTTGGGC
TTTCTGATGATTTAAGGCCTTCATCTTCAGTGGTGTCTGATGGGCCAAAT
ATCGATCTTGCACAAGTGTATGCAAGTTTTCTGAATGTGAAGCCAGATGA
AGTGCAAACAGTTTCTCCTGAGTATTCAAGCATAGTTAACACTAGTGCTT
TGTCTGAAGAGCATGGTCGTTTGCATTTTCATGAACAGCCCAGAGAATCC
CATTTTGGTGAGGATATCGAAATGTACTTTTGCGGGTTGAACTCTATCCA
GAAGCATCAGGAGTATAGTAGCAGTCATGATACAAGAGTTACAAAAACAA
ATTTTGAGTTGCCTCCATTACCAGGTGAAGTTGCAGAAACCTCACATGGT
AATGTGTTGTGGTCCAATTCTGAGATGATGGTGGATCATGCTTTGCAAGC
CACCCAATGGCCCCTTCTTGGACCAGAAGCTTATGATGCAGACTTCTTCA
TGGGTAACTGTTGGAGCCACTTCGATTTTCCAAGGGATGCTTCTTTTTCC
ACGCCTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003851Znf_Dof
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding