Vigun01g180500.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1) HSP 1 Score: 159.073 bits (401), Expect = 9.593e-47 Identity = 104/257 (40.47%), Postives = 135/257 (52.53%), Query Frame = 1 Query: 13 WKANT---VEISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKALRQAHSPVGLSDDLRPSSSVVSDGPNIDLAQVYASFLNVKPDEVQTVSPEYSSIVNTSALSEEHGRLHFHEQPRESHFGEDIEMYFCGLNSIQKHQEYSSSHDTRVTKTNFE-LPPLPGEVAETSHGNVLWSNSEMMVDH--------ALQATQWPLL--GPEAYDADFFMGNCWSHFDFPRDA 741
W+ N EI+P+CPRCGSSNTKFCYYNNYS TQPRYFCKGCRRYWTKGGSLRNVP+GGGCRKSRR K + S S + S P+IDLA VYA+FLN KPDE ++ E + T L + P + M + H Y + + V + + LPP PGE + N +WS++ +++ H +QA P++ E+ D+ + WS FDF D
Sbjct: 13 WRPNANANAEITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPKSSSGNNTKTSLTANSGNPGGGS------PSIDLALVYANFLNPKPDE--SILQENCDLATTDFLVD---------NPTGTSMDPSWSMDI----NDGHHDHYINPVEHIVEECGYNGLPPFPGEELLSLDTNGVWSDA-LLIGHNHVDVGVTPVQAVHEPVVHFADESNDSTNLLFGSWSPFDFTADG 247
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF12_ARATH (Dof zinc finger protein DOF1.2 OS=Arabidopsis thaliana OX=3702 GN=DOF1.2 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 2.382e-34 Identity = 64/104 (61.54%), Postives = 75/104 (72.12%), Query Frame = 1 Query: 37 SPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRK---SRRGKYNKALRQAHSPVGL--SDDLRPSSSVVSDGPNIDLAQVYASFL 333
+P CPRC SSNTKFCYYNNYS +QPRYFCKGCRRYWTKGGSLRN+P+GGGCRK SR+ + + R + P GL DD SS SD IDLA V+A ++
Sbjct: 37 APACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSD---IDLAAVFAQYV 137
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 3.228e-30 Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1 Query: 31 EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKALRQAHSPVGLSDDLRPSSSV----VSDGPNIDLAQVYA 324
E++ CPRC S+NTKFCYYNNYS TQPRYFCK CRRYWTKGG+LRN+P+GGGCRK++R + A +P S D + S+ S+ +IDL+ +A
Sbjct: 52 ELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNKRSTSSAARSLRTTPEPASHDGKVFSAAGFNGYSNNEHIDLSLAFA 153
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 9.391e-28 Identity = 45/54 (83.33%), Postives = 50/54 (92.59%), Query Frame = 1 Query: 43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
NCPRC S+NTKFCYYNNYS TQPRYFCKGCRRYWT+GGSLRNVP+GG RK++R
Sbjct: 75 NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKR 128
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF46_ARATH (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.773e-27 Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 1 Query: 43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
NCPRC S+NTKFCYYNNYS TQPRYFCKGCRRYWT+GGSLRN+P+GGG RK++R
Sbjct: 54 NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGGSRKNKR 107
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF11_ARATH (Dof zinc finger protein DOF1.1 OS=Arabidopsis thaliana OX=3702 GN=DOF1.1 PE=1 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 4.476e-27 Identity = 48/76 (63.16%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 4 ERGWKANTVEISP--NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGKYNKAL 225
ER +AN ++ CPRC SSNTKFCYYNNY+ TQPR+FCKGCRRYWT+GG+LRNVP+GGGCR++ + N L
Sbjct: 63 ERARQANIPPLAGPLKCPRCDSSNTKFCYYNNYNLTQPRHFCKGCRRYWTQGGALRNVPVGGGCRRNNKKGKNGNL 138
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF24_ARATH (Dof zinc finger protein DOF2.4 OS=Arabidopsis thaliana OX=3702 GN=DOF2.4 PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 6.192e-27 Identity = 47/72 (65.28%), Postives = 59/72 (81.94%), Query Frame = 1 Query: 1 MERGWKANTV--EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRRGK 210
++R +AN E + CPRC S+NTKFCY+NNYS TQPR+FCK CRRYWT+GG+LRNVP+GGGCR++RR K
Sbjct: 74 VDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNRRTK 145
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF21_ARATH (Dof zinc finger protein DOF2.1 OS=Arabidopsis thaliana OX=3702 GN=DOF2.1 PE=2 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 8.340e-27 Identity = 44/54 (81.48%), Postives = 50/54 (92.59%), Query Frame = 1 Query: 43 NCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
NCPRC S NTKFCYYNNYS +QPRYFCK CRRYWTKGG+LRNVP+GGGCR+++R
Sbjct: 49 NCPRCESPNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRRNKR 102
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF3_ORYSJ (Dof zinc finger protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.038e-26 Identity = 45/56 (80.36%), Postives = 49/56 (87.50%), Query Frame = 1 Query: 37 SPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR 204
SP CPRC S TKFCYYNNYS QPRYFC+ CRRYWT+GGSLRNVP+GGGCRKS+R
Sbjct: 44 SPCCPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKR 99
BLAST of Vigun01g180500.1 vs. DB:Swiss
Match: DOF32_ARATH (Dof zinc finger protein DOF3.2 OS=Arabidopsis thaliana OX=3702 GN=DOF3.2 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 1.077e-26 Identity = 60/117 (51.28%), Postives = 71/117 (60.68%), Query Frame = 1 Query: 31 EISPNCPRCGSSNTKFCYYNNYSSTQPRYFCKGCRRYWTKGGSLRNVPIGGGCRKSRR-GKYNKALRQAHSPVGLSDDLR-PSSSVVSDGPNI-----DLAQVYASFLNVKPDEVQT 360
E S CPRC S+NTKFCYYNNYS +QPRYFCK CRRYWTKGG LRN+PIGG RK +R K+LR P D P++S + NI +L YA LN +P V +
Sbjct: 37 EQSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSSATKSLRTTPEPTMTHDGKSFPTASFGYNNNNISNEQMELGLAYA-LLNKQPLGVSS 152 The following BLAST results are available for this feature:
BLAST of Vigun01g180500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=mRNA; length=759bpback to top protein sequence of Vigun01g180500.1_Vu_IT97K-499-35_v1.1 >Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=253bpback to top mRNA from alignment at Vu01:36142751..36143509- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=mRNA; length=759bp; location=Sequence derived from: Vu01:36142751..36143509- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu01:36142751..36143509- >Vigun01g180500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g180500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g180500.1; organism=Vigna unguiculata; type=CDS; length=759bp; location=Sequence derived from: Vu01:36142751..36143509- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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