Vigun01g181500.1

Transcript Overview
NameVigun01g181500.1
Unique NameVigun01g181500.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1392
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:36243437..36244828 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR019Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR026Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL194Pisum sativum Cameor genome v1aPisum sativum
crvuL003Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL474Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL006Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0225Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL260Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0474Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1026Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1154Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL327Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL406Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL575Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR037Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR043Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL121Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL114Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL353Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL013Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL577Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR018Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL005Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL221Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL337Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL500Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL001Cicer arietinum
carvuL159Cicer arietinum
carvuL236Cicer arietinum
ccavuL070Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR019Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR059Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL486Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL548Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL324Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL504Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL553Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL403Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL502Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR014Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR020Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr01.1735Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
XM_058882975.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan03g250700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.04G355200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_07987.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigst.04G230700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Phvul.001G197100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_03127.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
evm.model.Chr07.1723Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg31607.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Va03G076440.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014640006.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_00294Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-TanjilR_19807Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_00867Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
rna-KK1_003219Cajanus cajan Asha genome v1.0Cajanus cajan
Vum_04G02600.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_004494203.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.5g154880.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.5g124160.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g018300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g018300.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun01g181500.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g181500Vigun01g181500_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g181500.1Vigun01g181500.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g181500.1_Vu_IT97K-499-35_v1.1Vigun01g181500.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g181500.1.v1.1.five_prime_UTR.1Vigun01g181500.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g181500.1.v1.1.CDS.1Vigun01g181500.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g181500.1.v1.1.three_prime_UTR.1Vigun01g181500.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: Y5986_ARATH (Uncharacterized protein At5g39865 OS=Arabidopsis thaliana OX=3702 GN=At5g39865 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.296e-34
Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = 1 
Query:  340 GNHSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREELWKILGGK------VIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSP-----CTGCANMGFAICSNCCGSCKVF--SCDRDNNNNHECFVRCPDCNENGLVKCPVCC 801
            G   ++LY TSLRGIRKT+ DC  IR +L+S  I   ERDVS+H  F++EL K+L GK      +  P++F+  +Y+GG +E+  L+E G L K ++        SP     C  C ++ F  C  C GSCK++    + D       F RCP CNENGL++C VCC
Sbjct:  223 GKERVVLYFTSLRGIRKTYEDCCNIRIILKSLGIRIDERDVSMHSGFKDELKKLLEGKFNNGVGITLPRVFLGNKYLGGVEEIKKLNENGELEKLIKDCEMVEDGSPGFGNECEACGDVRFVPCETCSGSCKLYHEGEEEDEGVTEYGFQRCPYCNENGLIRCHVCC 389
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: Y3885_ARATH (Uncharacterized protein At3g28850 OS=Arabidopsis thaliana OX=3702 GN=At3g28850 PE=4 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.798e-30
Identity = 70/179 (39.11%), Postives = 95/179 (53.07%), Query Frame = 1 
Query:  340 GNHSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREELWKILGGK------VIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDS-----PCTGCANMGFAICSNCCGSCKVFSCDRD--------------NNNNHECFVRCPDCNENGLVKCPVCC 801
            G   +ILY TSLRGIRKT+ +   +R +L+S  I   ERDVS+H  F++EL ++LG K      +  P++F+  +YIGGA+E+  L+E G L K L G      +       C  C ++ F  C  C GSCKV+    D                     F  CPDCNENGL++CPVCC
Sbjct:  249 GKERVILYFTSLRGIRKTYEESCDVRVILKSLGIRVDERDVSMHSGFKDELKELLGEKFNKGVGITLPRVFLGRKYIGGAEEIRKLNEDGKLEKLLGGCERVEENQNGNGLECEACGDVRFVPCETCSGSCKVYYEYEDDDDDDDEGDDDESVKEEREYGFQTCPDCNENGLIRCPVCC 427
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GRCR1_DROME (Glutaredoxin domain-containing cysteine-rich protein CG31559 OS=Drosophila melanogaster OX=7227 GN=CG31559 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.662e-21
Identity = 49/150 (32.67%), Postives = 89/150 (59.33%), Query Frame = 1 
Query:  352 IILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREEL-WKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSPCTGCANMGFAICSNCCGSCKVFSCDRDNNNNHECFVRCPDCNENGLVKCPVC 798
            ++LYTTS+  IR+T+  C  ++ +LR+  + + ERDV + +E++ E+  ++  G+V  P+L+++G++IG A+ V  ++E+G L + L+   + +S   C  C       C +C GS K  S  R++       ++C +C+E GLVKC  C
Sbjct:  307 VVLYTTSMGIIRETYTKCANVKQILRTLLVKFEERDVFMSVEYQAEMRQRMQSGQVRVPQLYVEGQHIGDAETVERMNESGELRQLLKPYKSMASTYTCQTCGGYRLLPCPSCNGSKK--SVHRNHFTAEFVALKCMNCDEVGLVKCHNC 454
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GRCR2_DROME (Glutaredoxin domain-containing cysteine-rich protein CG12206 OS=Drosophila melanogaster OX=7227 GN=CG12206 PE=2 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.125e-20
Identity = 49/150 (32.67%), Postives = 86/150 (57.33%), Query Frame = 1 
Query:  352 IILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREELWKILGGKVIP-PKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSPCTGCANMGFAICSNCCGSCKVFSCDRDNNNNHECFVRCPDCNENGLVKCPVC 798
            ++LYTTS+  IR T+  C  ++ +LR+  I + ERD+ + +E+++E+ + +  + I  P+LF++G+ IG A+ V  L+E+G L + L    + ++   C  C       C  C GS K  S  R++       ++C +C+E GL+KCP C
Sbjct:  435 VVLYTTSMGIIRDTYAKCANVKKILRTLLIKFEERDIFMSVEYQQEMRERMQDETIRVPQLFVEGQLIGDANIVERLNESGELRQLLRPYKSIATAYTCQTCGGYRMLPCPACNGSKK--SMHRNHFTAEFVALKCMNCDEVGLIKCPNC 582
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GRCR1_HUMAN (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Homo sapiens OX=9606 GN=GRXCR1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.594e-17
Identity = 47/152 (30.92%), Postives = 81/152 (53.29%), Query Frame = 1 
Query:  352 IILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREEL---WKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSPCTGCANMGFAICSNCCGSCKVFSCDRDNNNNHECFVRCPDCNENGLVKCPVC 798
            +++YTT LR +R TF  C  +R + ++ ++ + E++++L+ E+ +EL    + +      P +FI G Y+GGA++++ ++E+G L   L           C  C   GF  CS C GS    S  R+   +    ++C  CNENGL +C  C
Sbjct:  139 VVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGEYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDILTKIERVQHPHECPSCGGFGFLPCSVCHGS--KMSMFRNCFTDSFKALKCTACNENGLQRCKNC 288
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GRCR1_MOUSE (Glutaredoxin domain-containing cysteine-rich protein 1 OS=Mus musculus OX=10090 GN=Grxcr1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.996e-17
Identity = 46/152 (30.26%), Postives = 81/152 (53.29%), Query Frame = 1 
Query:  352 IILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVSLHLEFREEL---WKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSPCTGCANMGFAICSNCCGSCKVFSCDRDNNNNHECFVRCPDCNENGLVKCPVC 798
            +++YTT LR +R TF  C  +R + ++ ++ + E++++L+ ++ +EL    + +      P +FI G Y+GGA++++ ++E+G L   L           C  C   GF  CS C GS    S  R+   +    ++C  CNENGL +C  C
Sbjct:  139 VVIYTTCLRVVRTTFERCELVRKIFQNHRVKFEEKNIALNGDYGKELDERCRRVSEAPSLPVVFIDGHYLGGAEKILSMNESGELQDLLTKIERVQHPHECPSCGGFGFLPCSVCHGS--KMSVFRNCFTDAFKALKCTACNENGLQRCKNC 288
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GLRX1_RICTY (Glutaredoxin 1 OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington) OX=257363 GN=grxC1 PE=3 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 4.308e-7
Identity = 32/104 (30.77%), Postives = 51/104 (49.04%), Query Frame = 1 
Query:  346 HSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVS-LHLEFREELWKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTPTHSSDSPCTGC 654
            H+II+YT +      +   C   + LL    ++Y E +VS    E +E   K  GGK   P++FI   ++GG D++  L + G L K LE  P + +    +G 
Sbjct:    7 HTIIIYTLA------SCPYCIKAKALLDKKNVIYEEIEVSNFTQEEKEAFIKKSGGKNTVPQIFIDNMHVGGCDDLFNLEQDGRLDKLLETQPKNKNSLTVSGA 104
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GLRX1_RICPR (Glutaredoxin 1 OS=Rickettsia prowazekii (strain Madrid E) OX=272947 GN=grxC1 PE=3 SV=1)

HSP 1 Score: 50.447 bits (119), Expect = 4.784e-7
Identity = 32/93 (34.41%), Postives = 49/93 (52.69%), Query Frame = 1 
Query:  346 HSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVS-LHLEFREELWKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTP 621
            H+II+YT +      +   C   + LL    ++Y E +VS L  E +E+  K  GGK   P++FI   ++GG D++  L + G L K LE  P
Sbjct:    7 HTIIIYTLA------SCPYCIKAKALLDKKNVIYEEIEVSNLTQEEKEKFIKKSGGKSTVPQIFIDNMHVGGCDDLFNLEKEGRLDKLLEHQP 93
[Close]
BLAST of Vigun01g181500.1 vs. DB:Swiss
Match: GLRX1_RICFE (Glutaredoxin 1 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) OX=315456 GN=grxC1 PE=3 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 8.327e-7
Identity = 32/93 (34.41%), Postives = 48/93 (51.61%), Query Frame = 1 
Query:  346 HSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYHERDVS-LHLEFREELWKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLGKFLEGTP 621
            H+II+YT +      +   C   + LL    ++Y E +VS    E +E+  K  GGK   P++FI   ++GG D +  L + G L K LEG P
Sbjct:    7 HTIIIYTLA------SCPYCIKAKALLDEKNVVYEEIEVSNFTQEEKEKFIKKSGGKKTVPQIFIDNIHVGGCDALFDLEKEGRLDKLLEGQP 93
The following BLAST results are available for this feature:
BLAST of Vigun01g181500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 9
Match NameE-valueIdentityDescription
Y5986_ARATH3.296e-3441.32Uncharacterized protein At5g39865 OS=Arabidopsis t... [more]
Y3885_ARATH1.798e-3039.11Uncharacterized protein At3g28850 OS=Arabidopsis t... [more]
GRCR1_DROME7.662e-2132.67Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR2_DROME5.125e-2032.67Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_HUMAN1.594e-1730.92Glutaredoxin domain-containing cysteine-rich prote... [more]
GRCR1_MOUSE2.996e-1730.26Glutaredoxin domain-containing cysteine-rich prote... [more]
GLRX1_RICTY4.308e-730.77Glutaredoxin 1 OS=Rickettsia typhi (strain ATCC VR... [more]
GLRX1_RICPR4.784e-734.41Glutaredoxin 1 OS=Rickettsia prowazekii (strain Ma... [more]
GLRX1_RICFE8.327e-734.41Glutaredoxin 1 OS=Rickettsia felis (strain ATCC VR... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10coord: 116..211
e-value: 6.0E-17
score: 63.4
NoneNo IPR availableCDDcd03031GRX_GRX_likecoord: 117..263
e-value: 4.75221E-63
score: 192.836
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 118..184
e-value: 3.5E-10
score: 39.9
IPR002109GlutaredoxinPROSITEPS51354GLUTAREDOXIN_2coord: 106..210
score: 16.19
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 110..204

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g181500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g181500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g181500.1; organism=Vigna unguiculata; type=mRNA; length=1392bp
CTCTCTTCAATCCATAACACAAAACTTATCGTCAACCCCACTCTATTGCC
TCACTCATTCTCACAACCTCTTCTTTTCTTCACTCTTTTCACTCACATGC
CATCCAATTTTCTAGAGCTACAAGACACAACAGGAATAATGGTGAGGGGA
AGGTTCGTCACAAAACTAAAACTCCTCCCAACCATAACCAACTTGAAGAA
ACAAGGCCTTCTTCTTCAAAAAAGGTTTCCAACCCCATATCATGACTACA
AAGAAAACAACCTATCTCACCTGGTGCTTGATGATGATGGTAATCATTTC
GGGGAGGAAGAAGCCACCGTAGGGTCCAAAGAAATCACAAAACCTTCCGA
ACAAAAGTTATCAGTGCCTGCTATGGCATCATGCAACAATGGATACCCAT
CTCTCAGTGATTTCAAAGAGTTATGTCCACCAGGGGGGAACCACTCCATC
ATTCTCTACACAACAAGCCTGAGAGGGATAAGGAAAACGTTTCATGACTG
TAACACGATCCGTTTCTTGTTGAGGAGCTTCAAAATAATGTACCATGAGA
GGGATGTGTCTCTGCACTTGGAGTTCAGAGAGGAGTTGTGGAAAATCTTG
GGAGGGAAAGTCATCCCTCCCAAGCTTTTCATCAAGGGAAGGTACATTGG
AGGAGCCGATGAAGTGGTTGGGTTGCACGAGACGGGGTGGCTTGGGAAGT
TTCTAGAAGGAACACCAACTCACTCCAGTGATTCTCCTTGCACCGGCTGC
GCCAACATGGGATTCGCCATTTGTTCCAACTGTTGTGGAAGTTGCAAAGT
GTTCAGTTGCGACAGGGACAACAACAACAACCATGAATGTTTCGTTAGAT
GTCCTGATTGTAACGAGAATGGCCTTGTCAAATGCCCCGTTTGCTGCTAG
AGATTTATCCAACCTTTTGGTGCGTTTGTTTTCATTTTTCAGTTCATATG
TTATGATTACAAAAACATCGTTTCTATTTTCACTCTATTTTTGTTTTCAA
AAATTTGTTAAGGAAAAAGGTGGCAACAAATTTAGCTCGGTTGTTCTCAC
CGATTTCTTTATAGATTTGTGAAAATGAGAAGTAGATGTAAAAATAAAGA
GATGTTTTAATAATTATTGGCATCAACTGAAAATGAAAAGAAAAAACAAA
CCAAGGTGGCCAAATAAGTTTTATATCATTCTTCTTGTACTATATTATTG
ATATTTTTTGCTCTTTAACCTTGTCTATCTGGTTCCTTAGAAATGGACAT
TCTATGCAACTCGTACTATCAGATGTAGAAACTGTAATACAAGCTCATGT
TGTGTAGTGTGACAGGTAAACATGTCACTCGGTTATTAATAGGTTGTACA
GTGATTTTGAATGAATGGAAAATTTGAGTATCGTGTTTTCAT
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protein sequence of Vigun01g181500.1_Vu_IT97K-499-35_v1.1

>Vigun01g181500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g181500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g181500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=268bp
MPSNFLELQDTTGIMVRGRFVTKLKLLPTITNLKKQGLLLQKRFPTPYHD
YKENNLSHLVLDDDGNHFGEEEATVGSKEITKPSEQKLSVPAMASCNNGY
PSLSDFKELCPPGGNHSIILYTTSLRGIRKTFHDCNTIRFLLRSFKIMYH
ERDVSLHLEFREELWKILGGKVIPPKLFIKGRYIGGADEVVGLHETGWLG
KFLEGTPTHSSDSPCTGCANMGFAICSNCCGSCKVFSCDRDNNNNHECFV
RCPDCNENGLVKCPVCC*
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mRNA from alignment at Vu01:36243437..36244828+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g181500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g181500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g181500.1; organism=Vigna unguiculata; type=mRNA; length=1392bp; location=Sequence derived from: Vu01:36243437..36244828+ (Vigna unguiculata
CTCTCTTCAATCCATAACACAAAACTTATCGTCAACCCCACTCTATTGCC
TCACTCATTCTCACAACCTCTTCTTTTCTTCACTCTTTTCACTCACATGC
CATCCAATTTTCTAGAGCTACAAGACACAACAGGAATAATGGTGAGGGGA
AGGTTCGTCACAAAACTAAAACTCCTCCCAACCATAACCAACTTGAAGAA
ACAAGGCCTTCTTCTTCAAAAAAGGTTTCCAACCCCATATCATGACTACA
AAGAAAACAACCTATCTCACCTGGTGCTTGATGATGATGGTAATCATTTC
GGGGAGGAAGAAGCCACCGTAGGGTCCAAAGAAATCACAAAACCTTCCGA
ACAAAAGTTATCAGTGCCTGCTATGGCATCATGCAACAATGGATACCCAT
CTCTCAGTGATTTCAAAGAGTTATGTCCACCAGGGGGGAACCACTCCATC
ATTCTCTACACAACAAGCCTGAGAGGGATAAGGAAAACGTTTCATGACTG
TAACACGATCCGTTTCTTGTTGAGGAGCTTCAAAATAATGTACCATGAGA
GGGATGTGTCTCTGCACTTGGAGTTCAGAGAGGAGTTGTGGAAAATCTTG
GGAGGGAAAGTCATCCCTCCCAAGCTTTTCATCAAGGGAAGGTACATTGG
AGGAGCCGATGAAGTGGTTGGGTTGCACGAGACGGGGTGGCTTGGGAAGT
TTCTAGAAGGAACACCAACTCACTCCAGTGATTCTCCTTGCACCGGCTGC
GCCAACATGGGATTCGCCATTTGTTCCAACTGTTGTGGAAGTTGCAAAGT
GTTCAGTTGCGACAGGGACAACAACAACAACCATGAATGTTTCGTTAGAT
GTCCTGATTGTAACGAGAATGGCCTTGTCAAATGCCCCGTTTGCTGCTAG
AGATTTATCCAACCTTTTGGTGCGTTTGTTTTCATTTTTCAGTTCATATG
TTATGATTACAAAAACATCGTTTCTATTTTCACTCTATTTTTGTTTTCAA
AAATTTGTTAAGGAAAAAGGTGGCAACAAATTTAGCTCGGTTGTTCTCAC
CGATTTCTTTATAGATTTGTGAAAATGAGAAGTAGATGTAAAAATAAAGA
GATGTTTTAATAATTATTGGCATCAACTGAAAATGAAAAGAAAAAACAAA
CCAAGGTGGCCAAATAAGTTTTATATCATTCTTCTTGTACTATATTATTG
ATATTTTTTGCTCTTTAACCTTGTCTATCTGGTTCCTTAGAAATGGACAT
TCTATGCAACTCGTACTATCAGATGTAGAAACTGTAATACAAGCTCATGT
TGTGTAGTGTGACAGGTAAACATGTCACTCGGTTATTAATAGGTTGTACA
GTGATTTTGAATGAATGGAAAATTTGAGTATCGTGTTTTCAT
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Coding sequence (CDS) from alignment at Vu01:36243437..36244828+

>Vigun01g181500.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g181500.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g181500.1; organism=Vigna unguiculata; type=CDS; length=804bp; location=Sequence derived from: Vu01:36243437..36244828+ (Vigna unguiculata
ATGCCATCCAATTTTCTAGAGCTACAAGACACAACAGGAATAATGGTGAG
GGGAAGGTTCGTCACAAAACTAAAACTCCTCCCAACCATAACCAACTTGA
AGAAACAAGGCCTTCTTCTTCAAAAAAGGTTTCCAACCCCATATCATGAC
TACAAAGAAAACAACCTATCTCACCTGGTGCTTGATGATGATGGTAATCA
TTTCGGGGAGGAAGAAGCCACCGTAGGGTCCAAAGAAATCACAAAACCTT
CCGAACAAAAGTTATCAGTGCCTGCTATGGCATCATGCAACAATGGATAC
CCATCTCTCAGTGATTTCAAAGAGTTATGTCCACCAGGGGGGAACCACTC
CATCATTCTCTACACAACAAGCCTGAGAGGGATAAGGAAAACGTTTCATG
ACTGTAACACGATCCGTTTCTTGTTGAGGAGCTTCAAAATAATGTACCAT
GAGAGGGATGTGTCTCTGCACTTGGAGTTCAGAGAGGAGTTGTGGAAAAT
CTTGGGAGGGAAAGTCATCCCTCCCAAGCTTTTCATCAAGGGAAGGTACA
TTGGAGGAGCCGATGAAGTGGTTGGGTTGCACGAGACGGGGTGGCTTGGG
AAGTTTCTAGAAGGAACACCAACTCACTCCAGTGATTCTCCTTGCACCGG
CTGCGCCAACATGGGATTCGCCATTTGTTCCAACTGTTGTGGAAGTTGCA
AAGTGTTCAGTTGCGACAGGGACAACAACAACAACCATGAATGTTTCGTT
AGATGTCCTGATTGTAACGAGAATGGCCTTGTCAAATGCCCCGTTTGCTG
CTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002109Glutaredoxin
IPR036249Thioredoxin-like_sf
Vocabulary: Molecular Function
TermDefinition
GO:0015035protein-disulfide reductase activity
GO:0009055electron transfer activity
Vocabulary: Biological Process
TermDefinition
GO:0045454cell redox homeostasis