Vigun01g183000.1

Transcript Overview
NameVigun01g183000.1
Unique NameVigun01g183000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1869
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:36359826..36361694 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR026Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
psvuL194Pisum sativum Cameor genome v1aPisum sativum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0225Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL260Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0860Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1154Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL327Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL410Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL349Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL353Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL326Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL577Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR018Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL221Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL342Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
carvuL236Cicer arietinum
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR019Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL548Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL329Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL553Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL502Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR020Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cr_05475.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan03g292900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Tiffany.R1.3g081800.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Phvul.001G198600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Hedin2.R1.5g156520.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_010398Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_07934.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_014639545.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg31585.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g125200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_00886Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va03G082030.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004494228.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
XM_058882957.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Cc_v2.0_08005.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_04G02613.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr01.1001341Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.04G232100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.3g101680.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat3g027000.1Pisum sativum Cameor genome v1aPisum sativum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g183000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g183000Vigun01g183000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g183000.1Vigun01g183000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g183000.1_Vu_IT97K-499-35_v1.1Vigun01g183000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g183000.1.v1.1.CDS.1Vigun01g183000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)

HSP 1 Score: 827.78 bits (2137), Expect = 0.000e+0
Identity = 390/622 (62.70%), Postives = 497/622 (79.90%), Query Frame = 1
Query:   19 SNSILKMLRLKNPKLVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTT-----NLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIG-DKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            SN +L  LR K+PKL LL+SC S  DLKI+H  LLRTHL  DVFVASRL+A C+D +T     NLL YA  + SQI++PNLF++N LIR  ST   P  +F +Y + L+  + PDNIT PFL+KA +++E   +G Q H QIV+ GF+ D +V+NSL+HMYA  G I AA  IF ++G  DVVSWTSM+AGY +CG VE+A ++FD MP RNL TWS MI+GYA+NN F+KA+++FE ++ EGVVANETVMV VISSCAHLGAL  GE+A++YV+++++++NLILGTA+VDM+ RCGD+ KA+ VFE LPE D L W+++I GLA+HG+A K + YFS+M+    +PRD+TFTAVLS CSH G+VEKGLEI+E+MK+DHG+EPRLEHYGC+VD+LGRAGKL EAE FIL+M VKPNAPI  ALLGAC+I+KN EV ERVG +L++++PEHSG+YVLLSNIYA A +W  +  +R MMK+K V+KPPG+SLIE+DGKI++FT+G D+ HPE+ KI R WE+ IL KI+L GY GNT ++ FD+DEEEKES++H HSEKLAIAYG+MK +    IRIVKNLRVCEDCHT TKLIS+V+  ELIVRDRNRFHHF+ G CSC+DYW
Sbjct:    2 SNIVLNTLRFKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEE-ILGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVCEDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 569.311 bits (1466), Expect = 0.000e+0
Identity = 272/601 (45.26%), Postives = 398/601 (66.22%), Query Frame = 1
Query:   70 LESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTT-NLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFD-IDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            L+ C   E+LK +HA +L+T L  D +  ++ ++FCI ST+ + L YA  V      P+ F++N +IRG S S  P+ S   Y + L      +  T P L+KAC+ L +     Q H QI K G+E D +  NSL++ YA  G+ K A  +F RI   D VSW S+I GY + G ++ A  LF +M E+N ++W+TMISGY + +   +A+++F  +Q   V  +   +   +S+CA LGAL  G+  H Y+ +  + ++ +LG  ++DMYA+CG++ +A++VF+ + +K V  WTALI+G A HG+  + +  F EM K  + P  ITFTAVL+ CS+ G+VE+G  IF SM+ D+ ++P +EHYGC+VDLLGRAG L EA++FI EMP+KPNA IW ALL ACRIHKN+E+GE +G+IL+ + P H G YV  +NI+A   KW      R++MK++GV K PG S I ++G  HEF  GD++HPEIEKI+  W  I+ +K++  GYV    E L D +D++E+E+ +H+HSEKLAI YG++K +    IRI+KNLRVC+DCH  TKLISK+++ ++++RDR RFHHF++G CSC DYW
Sbjct:   21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWR-IMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDGKCSCGDYW 620          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H14 PE=3 SV=1)

HSP 1 Score: 563.533 bits (1451), Expect = 0.000e+0
Identity = 276/608 (45.39%), Postives = 399/608 (65.62%), Query Frame = 1
Query:   49 KNPKLVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFG--VIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            K+P + LL+S  + ++++ +HA L       D  +    V     S    L YA +++ + + P LF  N++IR    S  P+ SF +Y + L  G  + PDN T  FLV+ACT L     G+Q HG  ++ GF+ D  VQ  L+ +YA +G + +   +F  I   D V  T+M+    RCGDV  A +LF+ MPER+ + W+ MISGYA+     +A+ +F ++Q EGV  N   M+ V+S+C  LGAL  G  AH Y+ RN + + + L T +VD+YA+CGD+ KA++VF  + EK+V  W++ + GLAM+G+ EK L  FS M +  V P  +TF +VL  CS  G V++G   F+SM+ + G+EP+LEHYGC+VDL  RAG+L +A   I +MP+KP+A +W +LL A R++KN+E+G    K +LE++  + G YVLLSNIYA +N W +V+ +RQ MK KGVRK PG S++EV+G++HEF +GDK+HP+  +I+ +W+DI  ++++LAGY  +T   +FDIDEEEKE AL  HSEK AIA+GIM ++  +PIRIVKNLRVC DCH  + +ISK+F  E+IVRDRNRFHHFK+G CSC  +W
Sbjct:    6 KHPAIALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDIS-RRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)

HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0
Identity = 266/621 (42.83%), Postives = 400/621 (64.41%), Query Frame = 1
Query:   70 LESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLH----YALRVVSQIKSPNLFIYNALIRGCSTSQYPQN----SFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIF--------------QRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            + +C ++ DL  +HA  +++    D   A+ ++ FC  +T++L H    YA ++ +Q+   N F +N +IRG S S   +     +  Y + +  F V P+  T P ++KAC +      G Q HG  +K+GF  D FV ++L+ MY   G +K AR +F              +R    ++V W  MI GY R GD ++A  LFD+M +R++V+W+TMISGY+ N +F  AVE+F  ++   +  N   +V V+ + + LG+L +GE  H Y   + + ++ +LG+A++DMY++CG + KA+ VFE+LP ++V+ W+A+I G A+HG A   +  F +M +  V P D+ +  +L+ CSH G+VE+G   F  M    G+EPR+EHYGCMVDLLGR+G L EAE+FIL MP+KP+  IW+ALLGACR+  NVE+G+RV  IL++M P  SG YV LSN+YA    W +V+ MR  MK+K +RK PG SLI++DG +HEF + D +HP+ ++I  M  +I   K++LAGY   T + L +++EE+KE+ LH HSEK+A A+G++      PIRIVKNLR+CEDCH++ KLISKV++ ++ VRDR RFHHF++G+CSC DYW
Sbjct:   30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFC--ATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEF-VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS-DKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP122_ARATH (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 495.352 bits (1274), Expect = 2.430e-167
Identity = 259/636 (40.72%), Postives = 382/636 (60.06%), Query Frame = 1
Query:   61 LVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFG-VIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVG-------------------------------DIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKD-VLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHP-EIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            L LL SC ++  L  +H   ++  +  D +   +L+  C  S ++ L YA R++     P+ F++N L+RG S S  P NS   +++ +R G V PD+ +  F++KA     S   G Q H Q +KHG E   FV  +L+ MY   G                               D+  AR IF ++   +  SW  M+AGY + G++ESA ++F  MP R+ V+WSTMI G A N  F+++   F  LQ  G+  NE  + GV+S+C+  G+   G+  H +V +   S  + +  A++DMY+RCG++  A  VFE + EK  ++ WT++IAGLAMHG  E+ +  F+EM    V P  I+F ++L  CSHAG++E+G + F  MK  + +EP +EHYGCMVDL GR+GKL +A  FI +MP+ P A +WR LLGAC  H N+E+ E+V + L E+ P +SG  VLLSN YA A KWKDV  +R+ M  + ++K   +SL+EV   +++FT G+K    +IE  E++ ++IIL+    AGY    A +L+D++EEEKE  + +HSEKLA+A+ + ++     IRIVKNLR+C DCH   KL SKV+ VE++VRDRNRFH FK+G+CSC+DYW
Sbjct:    9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKL-KEIILRLKDEAGYTPEVASALYDVEEEEKEDQVSKHSEKLALAFALARLSKGANIRIVKNLRICRDCHAVMKLTSKVYGVEILVRDRNRFHSFKDGSCSCRDYW 643          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP354_ARATH (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 484.567 bits (1246), Expect = 2.328e-163
Identity = 246/621 (39.61%), Postives = 388/621 (62.48%), Query Frame = 1
Query:   19 SNSILKMLRLKNPK--LVLLESCCSVEDLKIVHAHLLRTHLFFDV-FVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVV-ANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLK-TRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            S +     RL  P+   VL++   SV+++  +HA +LR +L     +    L      ++   + ++L +  Q   P+LF++ A I   S +     +F  Y++ L   + P+  T   L+K+C    S   G   H  ++K G  +D +V   L+ +YA  GD+ +A+ +F R+    +VS T+MI  Y + G+VE+A  LFD M ER++V+W+ MI GYA++ + + A+ +F+ L AEG    +E  +V  +S+C+ +GAL  G   H +V  + + LN+ + T ++DMY++CG L +AV VF   P KD++ W A+IAG AMHGY++  L  F+EM   T + P DITF   L  C+HAG+V +G+ IFESM +++G++P++EHYGC+V LLGRAG+L  A + I  M +  ++ +W ++LG+C++H +  +G+ + + L+ +  ++SG YVLLSNIYA    ++ V  +R +MK+KG+ K PG S IE++ K+HEF  GD+ H + ++I  M   I  ++IK  GYV NT   L D++E EKE +L  HSE+LAIAYG++  +   P++I KNLRVC DCHT TKLISK+   ++++RDRNRFHHF +G+CSC D+W
Sbjct:   17 STTATARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLRKIS-ERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP330_ARATH (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 478.789 bits (1231), Expect = 1.437e-161
Identity = 235/599 (39.23%), Postives = 380/599 (63.44%), Query Frame = 1
Query:   85 SVEDLKIVHAHLLRTHLFF-DVFVASRLVAFCID-STTNLLHYALRVVSQIKSP-NLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVI-PDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTR-VVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            S+  L+ +HA  +R  +   D  +   L+ + +   +   + YA +V S+I+ P N+FI+N LIRG +      ++F  Y +    G++ PD  T+PFL+KA T +    +G   H  +++ GF    +VQNSLLH+YA                                CGDV SA ++FD+MPE++LV W+++I+G+A N   ++A+ ++  + ++G+  +   +V ++S+CA +GAL +G++ H Y+++  L+ NL     ++D+YARCG + +A  +F+++ +K+ + WT+LI GLA++G+ ++ +  F  M  T  ++P +ITF  +L  CSH GMV++G E F  M+E++ +EPR+EH+GCMVDLL RAG++ +A ++I  MP++PN  IWR LLGAC +H + ++ E     +L+++P HSG YVLLSN+YA   +W DV  +R+ M   GV+K PG+SL+EV  ++HEF +GDK+HP+ + I    +++   +++  GYV   +    D++EEEKE+A+  HSEK+AIA+ ++      PI +VKNLRVC DCH A KL+SKV+  E++VRDR+RFHHFK G+CSC+DYW
Sbjct:   29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYAN-------------------------------CGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMT-GRLRSEGYVPQISNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREIVVRDRSRFHHFKNGSCSCQDYW 595          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP295_ARATH (Pentatricopeptide repeat-containing protein At3g62890 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H82 PE=2 SV=1)

HSP 1 Score: 472.241 bits (1214), Expect = 2.423e-159
Identity = 227/550 (41.27%), Postives = 356/550 (64.73%), Query Frame = 1
Query:  247 FIYNALIRGCS---TSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEG-----VVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQL-PEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKT-RVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            F++N +IR      +S    +    Y++     V PD  T PFL+ +       P+G + H QI+  G + D FV+ SLL+MY++ GD+++A+ +F   G  D+ +W S++  Y + G ++ A +LFD MPERN+++WS +I+GY     + +A+++F  +Q        V  NE  M  V+S+C  LGAL  G+  H Y+ + ++ ++++LGTA++DMYA+CG L +A +VF  L  +KDV  ++A+I  LAM+G  ++    FSEM  +  + P  +TF  +L  C H G++ +G   F+ M E+ G+ P ++HYGCMVDL GR+G + EAE FI  MP++P+  IW +LL   R+  +++  E   K L+E+ P +SG YVLLSN+YA+  +W +V  +R  M+ KG+ K PG S +EV+G +HEF +GD++  E E+I  M ++ I+++++ AGYV +T E L D++E++KE AL  HSEKLAIA+ +MK R   P+RI+KNLR+C DCH   K+ISK+F  E++VRD NRFHHF++G+CSC+D+W
Sbjct:   25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDE-IMQRLREAGYVTDTKEVLLDLNEKDKEIALSYHSEKLAIAFCLMKTRPGTPVRIIKNLRICGDCHLVMKMISKLFSREIVVRDCNRFHHFRDGSCSCRDFW 573          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP249_ARATH (Pentatricopeptide repeat-containing protein At3g22690 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H56 PE=3 SV=1)

HSP 1 Score: 478.789 bits (1231), Expect = 2.732e-158
Identity = 245/606 (40.43%), Postives = 375/606 (61.88%), Query Frame = 1
Query:   61 LVLLESCCSVEDLKI---VHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQA-EGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            + ++ +C  +EDL+    V+A +  + +  +  + S LV   +    N +  A R+  +  + NL + NA+          + +   +   +  GV PD I+    + +C+QL +   G   HG ++++GFE    + N+L+ MY        A  IF R+    VV+W S++AGY   G+V++A + F+ MPE+N+V+W+T+ISG  + + F++A+E+F  +Q+ EGV A+   M+ + S+C HLGAL + +  + Y+ +N + L++ LGT +VDM++RCGD   A+ +F  L  +DV  WTA I  +AM G AE+ +  F +M++  + P  + F   L+ CSH G+V++G EIF SM + HGV P   HYGCMVDLLGRAG L EA + I +MP++PN  IW +LL ACR+  NVE+     + +  + PE +G YVLLSN+YA A +W D+  +R  MK+KG+RKPPG S I++ GK HEFT GD++HPE+  IE M +++  +   L G+V + +  L D+DE+EK   L RHSEKLA+AYG++       IRIVKNLRVC DCH+  K  SKV+  E+I+RD NRFH+ ++G CSC D+W
Sbjct:  240 VCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYM--KCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL-GHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842          

HSP 2 Score: 177.563 bits (449), Expect = 7.481e-46
Identity = 107/341 (31.38%), Postives = 172/341 (50.44%), Query Frame = 1
Query:   70 LESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVA-FCIDSTTNLLHYALRVVSQIKS-PNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSH 1086
            L++C ++++LK+ H  L +  L  DV   ++LVA  C   T   L +A  V    +S    F+YN+LIRG ++S     +   +++ +  G+ PD  T PF + AC +  +   G+Q HG IVK G+  D FVQNSL+H YA  G++ +AR +F  +   +VVSWTSMI GY R    + A  LF RM                              ++ E V  N   MV VIS+CA L  L  GEK + ++  + + +N ++ +A+VDMY +C  +  A ++F++    ++    A+ +     G   + L  F+ M+ + V P  I+  + +S CS 
Sbjct:   39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM------------------------------VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQ 349          

HSP 3 Score: 85.8853 bits (211), Expect = 4.580e-16
Identity = 59/245 (24.08%), Postives = 123/245 (50.20%), Query Frame = 1
Query:  514 RSIFQRIGRFDVVSWTSMIAGYHRCGDVES---ACQLFDRMPERNLV-TWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKT-RVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILE 1233
            RS+ ++    DV + T ++A     G  ES   A ++F+          ++++I GYA +   ++A+ +F  +   G+  ++      +S+CA   A   G + H  +++   + +L +  ++V  YA CG+L  A KVF+++ E++V+ WT++I G A   +A+  +  F  M++   V P  +T   V+S C+    +E G +++  ++ + G+E        +VD+  +   +  A++   E
Sbjct:   53 RSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIR-NSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDE 296          
BLAST of Vigun01g183000.1 vs. DB:Swiss
Match: PP175_ARATH (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 458.373 bits (1178), Expect = 1.162e-151
Identity = 229/605 (37.85%), Postives = 372/605 (61.49%), Query Frame = 1
Query:   67 LLESCCSVEDLKI---VHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAE-GVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPEHSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHEFTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEE-KESALHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVELIVRDRNRFHHFKEGTCSCKDYW 1866
            L+++   V  L +   +H   +++ +  DVFVA+ L+  C  S  +L   A +V + IK  ++  +N++I G      P  +   + K     V   ++T   ++ AC ++ +   G Q    I ++   ++  + N++L MY   G I+ A+ +F  +   D V+WT+M+ GY    D E+A ++ + MP++++V W+ +IS Y +N   ++A+ +F  LQ +  +  N+  +V  +S+CA +GAL +G   H Y+ ++ + +N  + +A++ MY++CGDL K+ +VF  + ++DV  W+A+I GLAMHG   + +  F +M +  V P  +TFT V   CSH G+V++   +F  M+ ++G+ P  +HY C+VD+LGR+G L +A KFI  MP+ P+  +W ALLGAC+IH N+ + E     LLE++P + G +VLLSNIYA+  KW++V+ +R+ M+  G++K PG S IE+DG IHEF  GD  HP  EK+     + +++K+K  GY    ++ L  I+EEE KE +L+ HSEKLAI YG++   AP  IR++KNLRVC DCH+  KLIS+++  E+IVRDR RFHHF+ G CSC D+W
Sbjct:  137 LIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLI-HCYFSCGDL-DSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE-VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738          

HSP 2 Score: 204.912 bits (520), Expect = 9.782e-56
Identity = 128/444 (28.83%), Postives = 206/444 (46.40%), Query Frame = 1
Query:   61 LVLLESCCSVEDLKIVHAHLLRTHLFFDVFVASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQNSFHYYIKALRFG-VIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFELDFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVESACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANETVMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDLGKAVKVFE-------------------------------QLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEM-LKTRVVPRDITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAGKLGEAEKFILEMPVKPNAPIWRALLGACRIH 1293
            + L+E C S+  LK  H H++RT  F D + AS+L A    S+   L YA +V  +I  PN F +N LIR  ++   P  S   ++  +      P+  T PFL+KA  ++ S  +G   HG  VK     D FV NSL+H Y + GD+ +A  +F  I   DVVSW SMI G+ + G  +                               KA+E+F+ +++E V A+   MVGV+S+CA +  L  G +   Y+  N +++NL L  A++DMY +CG +  A ++F+                                +P+KD++ W ALI+    +G   + L  F E+ L+  +    IT  + LS C+  G +E G  I   +K+ HG+         ++ +  + G L E  + +     K +  +W A++G   +H
Sbjct:   34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD-------------------------------KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKK-HGIRMNFHVTSALIHMYSKCGDL-EKSREVFNSVEKRDVFVWSAMIGGLAMH 444          
The following BLAST results are available for this feature:
BLAST of Vigun01g183000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PP367_ARATH0.000e+062.70Pentatricopeptide repeat-containing protein At5g06... [more]
PP449_ARATH0.000e+045.26Pentatricopeptide repeat-containing protein At5g66... [more]
PP410_ARATH0.000e+045.39Putative pentatricopeptide repeat-containing prote... [more]
PP425_ARATH0.000e+042.83Pentatricopeptide repeat-containing protein At5g48... [more]
PP122_ARATH2.430e-16740.72Pentatricopeptide repeat-containing protein At1g74... [more]
PP354_ARATH2.328e-16339.61Pentatricopeptide repeat-containing protein ELI1, ... [more]
PP330_ARATH1.437e-16139.23Pentatricopeptide repeat-containing protein At4g21... [more]
PP295_ARATH2.423e-15941.27Pentatricopeptide repeat-containing protein At3g62... [more]
PP249_ARATH2.732e-15840.43Pentatricopeptide repeat-containing protein At3g22... [more]
PP175_ARATH1.162e-15137.85Pentatricopeptide repeat-containing protein At2g29... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 181..286
e-value: 8.6E-24
score: 86.4
coord: 20..180
e-value: 1.8E-16
score: 62.4
coord: 288..508
e-value: 1.3E-41
score: 144.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 288..314
e-value: 0.013
score: 15.7
coord: 351..379
e-value: 1.8E-5
score: 24.7
coord: 317..343
e-value: 4.0E-4
score: 20.4
coord: 184..213
e-value: 1.4E-7
score: 31.3
coord: 388..413
e-value: 0.018
score: 15.3
coord: 215..245
e-value: 1.1E-7
score: 31.6
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 184..214
e-value: 1.2E-5
score: 23.2
coord: 351..384
e-value: 1.1E-6
score: 26.4
coord: 215..248
e-value: 5.6E-8
score: 30.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 116..150
score: 5.821
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 182..216
score: 11.849
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 217..247
score: 8.035
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 451..485
score: 6.785
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 314..348
score: 9.843
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 385..419
score: 7.815
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 248..282
score: 5.415
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 283..313
score: 7.761
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 349..384
score: 8.692
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 151..181
score: 6.906
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 8.364
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 487..612
e-value: 1.0E-37
score: 128.8

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g183000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g183000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g183000.1; organism=Vigna unguiculata; type=mRNA; length=1869bp
ATGAGCTATGGCAGTGGCAGCAACTCAATTCTGAAAATGCTGAGGCTGAA
GAATCCCAAACTTGTGTTGTTGGAGAGTTGTTGCAGTGTTGAGGACCTCA
AAATCGTCCATGCCCATTTGCTAAGAACCCACCTTTTCTTCGATGTCTTT
GTAGCAAGTCGCCTCGTTGCTTTCTGCATAGACTCAACTACCAACTTGCT
TCATTACGCCTTAAGGGTTGTCTCCCAAATAAAAAGTCCCAACCTTTTCA
TCTACAATGCTCTCATCCGAGGTTGTTCCACCAGCCAATATCCACAAAAT
TCTTTTCACTATTACATCAAAGCTCTACGCTTTGGTGTCATACCTGATAA
TATCACTCACCCTTTTTTGGTTAAAGCGTGTACTCAGCTTGAGTCTGCAC
CTATGGGCATGCAAGCACACGGTCAAATTGTTAAGCATGGATTTGAACTT
GATTTTTTCGTTCAAAACTCCCTTCTTCATATGTATGCAACTGTTGGGGA
CATAAAGGCTGCAAGGAGCATTTTTCAGAGGATTGGTCGGTTTGACGTGG
TTTCGTGGACTAGCATGATTGCAGGGTATCATCGGTGTGGAGATGTTGAA
TCTGCATGTCAACTGTTTGATAGAATGCCCGAGAGGAATTTGGTGACGTG
GAGTACGATGATTAGTGGTTATGCTCGGAACAATTATTTTGACAAAGCGG
TTGAGATGTTTGAGGTTCTTCAGGCGGAAGGGGTGGTGGCTAATGAGACT
GTGATGGTTGGTGTCATATCTTCTTGTGCTCATTTGGGGGCTCTTGCAAT
GGGGGAGAAAGCTCATGACTATGTGATGAGAAATAACTTAAGTTTGAATC
TGATTCTTGGGACTGCTGTAGTTGATATGTATGCAAGATGTGGGGACCTT
GGGAAAGCTGTTAAGGTTTTTGAGCAACTGCCGGAAAAGGATGTGCTTTG
CTGGACAGCTTTGATTGCTGGACTGGCCATGCATGGTTATGCAGAGAAAG
TACTGTGGTATTTTTCAGAAATGCTGAAAACTAGAGTGGTTCCAAGGGAC
ATTACGTTTACTGCAGTGTTGTCAGTTTGCAGCCATGCAGGGATGGTTGA
GAAGGGTTTGGAAATATTTGAAAGCATGAAAGAAGATCATGGAGTGGAGC
CAAGATTGGAGCACTATGGATGTATGGTTGATCTTCTTGGTCGTGCAGGG
AAGTTGGGAGAGGCAGAGAAGTTTATTCTCGAAATGCCTGTGAAGCCAAA
TGCTCCAATATGGAGAGCACTACTAGGAGCATGCAGAATTCACAAGAATG
TAGAAGTTGGGGAGAGGGTGGGGAAAATTTTGTTAGAGATGCAACCAGAA
CATAGTGGTCATTATGTGCTACTCTCGAACATATACGCTCGCGCAAATAA
GTGGAAAGATGTTACTATTATGAGGCAGATGATGAAGGACAAAGGAGTAA
GAAAGCCACCTGGATACAGTCTCATTGAGGTAGATGGAAAGATTCACGAA
TTTACAATTGGAGATAAAACACACCCGGAAATAGAGAAAATAGAAAGAAT
GTGGGAAGATATAATACTCAAAAAAATAAAACTAGCAGGGTATGTTGGAA
ATACAGCGGAGTCATTGTTTGACATTGATGAAGAGGAAAAGGAAAGTGCA
CTTCACAGGCACAGTGAGAAGCTGGCCATTGCATATGGAATCATGAAGAT
TCGAGCTCCTCTACCCATTCGGATTGTTAAAAACTTGCGTGTCTGTGAAG
ATTGTCACACAGCTACTAAGTTGATTTCAAAGGTTTTCCAAGTAGAGTTG
ATAGTGAGAGATCGAAATCGATTCCATCATTTTAAAGAAGGCACGTGTTC
TTGTAAGGATTACTGGTGA
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protein sequence of Vigun01g183000.1_Vu_IT97K-499-35_v1.1

>Vigun01g183000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g183000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g183000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=623bp
MSYGSGSNSILKMLRLKNPKLVLLESCCSVEDLKIVHAHLLRTHLFFDVF
VASRLVAFCIDSTTNLLHYALRVVSQIKSPNLFIYNALIRGCSTSQYPQN
SFHYYIKALRFGVIPDNITHPFLVKACTQLESAPMGMQAHGQIVKHGFEL
DFFVQNSLLHMYATVGDIKAARSIFQRIGRFDVVSWTSMIAGYHRCGDVE
SACQLFDRMPERNLVTWSTMISGYARNNYFDKAVEMFEVLQAEGVVANET
VMVGVISSCAHLGALAMGEKAHDYVMRNNLSLNLILGTAVVDMYARCGDL
GKAVKVFEQLPEKDVLCWTALIAGLAMHGYAEKVLWYFSEMLKTRVVPRD
ITFTAVLSVCSHAGMVEKGLEIFESMKEDHGVEPRLEHYGCMVDLLGRAG
KLGEAEKFILEMPVKPNAPIWRALLGACRIHKNVEVGERVGKILLEMQPE
HSGHYVLLSNIYARANKWKDVTIMRQMMKDKGVRKPPGYSLIEVDGKIHE
FTIGDKTHPEIEKIERMWEDIILKKIKLAGYVGNTAESLFDIDEEEKESA
LHRHSEKLAIAYGIMKIRAPLPIRIVKNLRVCEDCHTATKLISKVFQVEL
IVRDRNRFHHFKEGTCSCKDYW*
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mRNA from alignment at Vu01:36359826..36361694-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g183000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g183000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g183000.1; organism=Vigna unguiculata; type=mRNA; length=1869bp; location=Sequence derived from: Vu01:36359826..36361694- (Vigna unguiculata
ATGAGCTATGGCAGTGGCAGCAACTCAATTCTGAAAATGCTGAGGCTGAA GAATCCCAAACTTGTGTTGTTGGAGAGTTGTTGCAGTGTTGAGGACCTCA AAATCGTCCATGCCCATTTGCTAAGAACCCACCTTTTCTTCGATGTCTTT GTAGCAAGTCGCCTCGTTGCTTTCTGCATAGACTCAACTACCAACTTGCT TCATTACGCCTTAAGGGTTGTCTCCCAAATAAAAAGTCCCAACCTTTTCA TCTACAATGCTCTCATCCGAGGTTGTTCCACCAGCCAATATCCACAAAAT TCTTTTCACTATTACATCAAAGCTCTACGCTTTGGTGTCATACCTGATAA TATCACTCACCCTTTTTTGGTTAAAGCGTGTACTCAGCTTGAGTCTGCAC CTATGGGCATGCAAGCACACGGTCAAATTGTTAAGCATGGATTTGAACTT GATTTTTTCGTTCAAAACTCCCTTCTTCATATGTATGCAACTGTTGGGGA CATAAAGGCTGCAAGGAGCATTTTTCAGAGGATTGGTCGGTTTGACGTGG TTTCGTGGACTAGCATGATTGCAGGGTATCATCGGTGTGGAGATGTTGAA TCTGCATGTCAACTGTTTGATAGAATGCCCGAGAGGAATTTGGTGACGTG GAGTACGATGATTAGTGGTTATGCTCGGAACAATTATTTTGACAAAGCGG TTGAGATGTTTGAGGTTCTTCAGGCGGAAGGGGTGGTGGCTAATGAGACT GTGATGGTTGGTGTCATATCTTCTTGTGCTCATTTGGGGGCTCTTGCAAT GGGGGAGAAAGCTCATGACTATGTGATGAGAAATAACTTAAGTTTGAATC TGATTCTTGGGACTGCTGTAGTTGATATGTATGCAAGATGTGGGGACCTT GGGAAAGCTGTTAAGGTTTTTGAGCAACTGCCGGAAAAGGATGTGCTTTG CTGGACAGCTTTGATTGCTGGACTGGCCATGCATGGTTATGCAGAGAAAG TACTGTGGTATTTTTCAGAAATGCTGAAAACTAGAGTGGTTCCAAGGGAC ATTACGTTTACTGCAGTGTTGTCAGTTTGCAGCCATGCAGGGATGGTTGA GAAGGGTTTGGAAATATTTGAAAGCATGAAAGAAGATCATGGAGTGGAGC CAAGATTGGAGCACTATGGATGTATGGTTGATCTTCTTGGTCGTGCAGGG AAGTTGGGAGAGGCAGAGAAGTTTATTCTCGAAATGCCTGTGAAGCCAAA TGCTCCAATATGGAGAGCACTACTAGGAGCATGCAGAATTCACAAGAATG TAGAAGTTGGGGAGAGGGTGGGGAAAATTTTGTTAGAGATGCAACCAGAA CATAGTGGTCATTATGTGCTACTCTCGAACATATACGCTCGCGCAAATAA GTGGAAAGATGTTACTATTATGAGGCAGATGATGAAGGACAAAGGAGTAA GAAAGCCACCTGGATACAGTCTCATTGAGGTAGATGGAAAGATTCACGAA TTTACAATTGGAGATAAAACACACCCGGAAATAGAGAAAATAGAAAGAAT GTGGGAAGATATAATACTCAAAAAAATAAAACTAGCAGGGTATGTTGGAA ATACAGCGGAGTCATTGTTTGACATTGATGAAGAGGAAAAGGAAAGTGCA CTTCACAGGCACAGTGAGAAGCTGGCCATTGCATATGGAATCATGAAGAT TCGAGCTCCTCTACCCATTCGGATTGTTAAAAACTTGCGTGTCTGTGAAG ATTGTCACACAGCTACTAAGTTGATTTCAAAGGTTTTCCAAGTAGAGTTG ATAGTGAGAGATCGAAATCGATTCCATCATTTTAAAGAAGGCACGTGTTC TTGTAAGGATTACTGGTGA
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Coding sequence (CDS) from alignment at Vu01:36359826..36361694-

>Vigun01g183000.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g183000.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g183000.1; organism=Vigna unguiculata; type=CDS; length=1869bp; location=Sequence derived from: Vu01:36359826..36361694- (Vigna unguiculata
ATGAGCTATGGCAGTGGCAGCAACTCAATTCTGAAAATGCTGAGGCTGAA
GAATCCCAAACTTGTGTTGTTGGAGAGTTGTTGCAGTGTTGAGGACCTCA
AAATCGTCCATGCCCATTTGCTAAGAACCCACCTTTTCTTCGATGTCTTT
GTAGCAAGTCGCCTCGTTGCTTTCTGCATAGACTCAACTACCAACTTGCT
TCATTACGCCTTAAGGGTTGTCTCCCAAATAAAAAGTCCCAACCTTTTCA
TCTACAATGCTCTCATCCGAGGTTGTTCCACCAGCCAATATCCACAAAAT
TCTTTTCACTATTACATCAAAGCTCTACGCTTTGGTGTCATACCTGATAA
TATCACTCACCCTTTTTTGGTTAAAGCGTGTACTCAGCTTGAGTCTGCAC
CTATGGGCATGCAAGCACACGGTCAAATTGTTAAGCATGGATTTGAACTT
GATTTTTTCGTTCAAAACTCCCTTCTTCATATGTATGCAACTGTTGGGGA
CATAAAGGCTGCAAGGAGCATTTTTCAGAGGATTGGTCGGTTTGACGTGG
TTTCGTGGACTAGCATGATTGCAGGGTATCATCGGTGTGGAGATGTTGAA
TCTGCATGTCAACTGTTTGATAGAATGCCCGAGAGGAATTTGGTGACGTG
GAGTACGATGATTAGTGGTTATGCTCGGAACAATTATTTTGACAAAGCGG
TTGAGATGTTTGAGGTTCTTCAGGCGGAAGGGGTGGTGGCTAATGAGACT
GTGATGGTTGGTGTCATATCTTCTTGTGCTCATTTGGGGGCTCTTGCAAT
GGGGGAGAAAGCTCATGACTATGTGATGAGAAATAACTTAAGTTTGAATC
TGATTCTTGGGACTGCTGTAGTTGATATGTATGCAAGATGTGGGGACCTT
GGGAAAGCTGTTAAGGTTTTTGAGCAACTGCCGGAAAAGGATGTGCTTTG
CTGGACAGCTTTGATTGCTGGACTGGCCATGCATGGTTATGCAGAGAAAG
TACTGTGGTATTTTTCAGAAATGCTGAAAACTAGAGTGGTTCCAAGGGAC
ATTACGTTTACTGCAGTGTTGTCAGTTTGCAGCCATGCAGGGATGGTTGA
GAAGGGTTTGGAAATATTTGAAAGCATGAAAGAAGATCATGGAGTGGAGC
CAAGATTGGAGCACTATGGATGTATGGTTGATCTTCTTGGTCGTGCAGGG
AAGTTGGGAGAGGCAGAGAAGTTTATTCTCGAAATGCCTGTGAAGCCAAA
TGCTCCAATATGGAGAGCACTACTAGGAGCATGCAGAATTCACAAGAATG
TAGAAGTTGGGGAGAGGGTGGGGAAAATTTTGTTAGAGATGCAACCAGAA
CATAGTGGTCATTATGTGCTACTCTCGAACATATACGCTCGCGCAAATAA
GTGGAAAGATGTTACTATTATGAGGCAGATGATGAAGGACAAAGGAGTAA
GAAAGCCACCTGGATACAGTCTCATTGAGGTAGATGGAAAGATTCACGAA
TTTACAATTGGAGATAAAACACACCCGGAAATAGAGAAAATAGAAAGAAT
GTGGGAAGATATAATACTCAAAAAAATAAAACTAGCAGGGTATGTTGGAA
ATACAGCGGAGTCATTGTTTGACATTGATGAAGAGGAAAAGGAAAGTGCA
CTTCACAGGCACAGTGAGAAGCTGGCCATTGCATATGGAATCATGAAGAT
TCGAGCTCCTCTACCCATTCGGATTGTTAAAAACTTGCGTGTCTGTGAAG
ATTGTCACACAGCTACTAAGTTGATTTCAAAGGTTTTCCAAGTAGAGTTG
ATAGTGAGAGATCGAAATCGATTCCATCATTTTAAAGAAGGCACGTGTTC
TTGTAAGGATTACTGGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_rpt
IPR032867DYW_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding