Vigun01g184800.1

Transcript Overview
NameVigun01g184800.1
Unique NameVigun01g184800.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2422
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu01supercontigVu01:36511906..36515309 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR026Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL193Pisum sativum Cameor genome v1aPisum sativum
crvuL220Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL000Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL578Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL164Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0233Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0866Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0545Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0650Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0870Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL410Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR021Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL349Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL353Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL326Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL331Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL581Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL538Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL238Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL577Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL437Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL756Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR000Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR018Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL143Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL270Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL342Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL159Cicer arietinum
carvuL236Cicer arietinum
ccavuL184Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL259Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR019Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR036Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR058Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL307Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL548Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL329Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL553Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL000Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL502Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL503Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR000Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR020Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat03G0108600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr01.1762Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg31553.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058884742.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-TanjilR_01851Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.04G234000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.5g126440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_010910Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Hedin2.R1.5g158200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
LR48_mrnaVigan03g290900Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.04G401200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat3g025960.1Pisum sativum Cameor genome v1aPisum sativum
Vum_04G02632.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr01.1001359Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Va03G081790.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_08026.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr07.1106Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-XM_014640345.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g184800.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun01g184800Vigun01g184800_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g184800.1Vigun01g184800.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun01g184800.1_Vu_IT97K-499-35_v1.1Vigun01g184800.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g184800.1.v1.1.three_prime_UTR.2Vigun01g184800.1.v1.1.three_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR
Vigun01g184800.1.v1.1.three_prime_UTR.1Vigun01g184800.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g184800.1.v1.1.five_prime_UTR.1Vigun01g184800.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun01g184800.1.v1.1.CDS.1Vigun01g184800.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


Homology
[Close]
BLAST of Vigun01g184800.1 vs. DB:Swiss
Match: WTF9_ARATH (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 7.204e-60
Identity = 123/348 (35.34%), Postives = 194/348 (55.75%), Query Frame = 1 
Query:  133 QWRGIVKVRLKWVKNRSLDHV--IDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVPVLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVK-SNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALA---FPMKFPRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLL 1158
            Q R  V V +KW ++   D++  I + + LK+   LK+ I +     +   +++   +   ++  +  FLR++P++F+EF  P + +LP FRLT  A  L  QE  ++Q   +D  +RL KL++M++   L L  +  +KW LGLPD + +    N  + F+FV   +GV  L +     +  +S LQ+      +  + +RG+ +L    FP+   +G   + K+  W+ EFQKLPYVSPY D S +DP+SD+ EKRVVG LHELL L +    +R  L  L+    LP K  + F R+P IFYLS+K KT T  LRE Y+    V+ HP++  R K+ ++M+   L
Sbjct:   20 QKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQFDVSTKIAHFLRKFPSIFEEFVGPEY-NLPWFRLTPEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDMEDGVKGLAVDYNGGDKVLSVLQK------NAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMKNSEL 360
[Close]
BLAST of Vigun01g184800.1 vs. DB:Swiss
Match: WTF1_ARATH (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.393e-36
Identity = 105/363 (28.93%), Postives = 178/363 (49.04%), Query Frame = 1 
Query:  148 VKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVP--VLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAFPMKF-----PRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHDDNNSLVEND 1215
            V+  +K  K  + D V+ ++  LK    ++  +       ++ + +  +++ LGL      +  LR+YP +F+      + SL  F++T  A  L+  E+ +    ++  V +L KL+MM+  + + L  +  LK DLGLP  F  T+   +P  F+ V +    +L+L  W  E AVSA +  +E     RE +     +  P KF     PRG    K     + +F+ + Y+SPY D S +   +   EK   GV+HELLSLT  K+T  ++L   R+E     +   +  R+P +FY+SLK +  ++ LRE Y++ +L+D  PL   ++K   ++      R  G  K D+    VE D
Sbjct:   72 VRAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAY-SL-RFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTPRGPALELTHWDPELAVSAAEL-SEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRK-DEEGREVEID 430
[Close]
BLAST of Vigun01g184800.1 vs. DB:Swiss
Match: WTF1_MAIZE (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 5.555e-36
Identity = 110/364 (30.22%), Postives = 178/364 (48.90%), Query Frame = 1 
Query:  163 KWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVP--VLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAFPMKF-----PRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYR----GDGSLKHDDNNSLVENDEL 1221
            K  K    D VI ++  LK    L++ +       ++ + +  +++ LGLT    ++  LRR+P +F       + SL  FRLT  A  L+  EL L    +  AV +L KLLMM++ + + +  +  LK DLGLP  F  T+   +P  F+ V+ +   +L+L  W  E AVSA +   E        +R    +  P+KF     P+G    +     +  F+++PY+SPY D S +   SD  EK   GV+HE+LSLT+ K+T  ++L   R+E         +  R+P +FY+S K    ++ LRE Y+  +LV+ + LV  ++K   ++      R    G G      N SL   D++
Sbjct:   56 KRRKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRRFPGVFDVVEEGVY-SL-RFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEKRILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRMDRGPALELTHWDPELAVSAAELAEEESRAREAEER-NLIIDRPLKFNRVRLPKGLKLTRGEARRIARFKEMPYISPYADFSHLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYVSFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALVAVPRFPRRAAVGTGEEAEGMNGSLQSRDQV 416
[Close]
BLAST of Vigun01g184800.1 vs. DB:Swiss
Match: WTF1_ORYSJ (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 2.443e-35
Identity = 119/401 (29.68%), Postives = 197/401 (49.13%), Query Frame = 1 
Query:  145 IVKVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQKLLGLTVP--VLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAFPMKF-----PRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKTTTITLREGYQSGKLVDPHPLVRHRDKFY------RVMQTGL------LYRGDGSLKHDDNNSLVENDELRSEDSGEEEVETSDELCEGESSD 1290
            + +  +K  K    D+VI ++  LK    L++ +  +    ++ + +  +++ LGLT    ++  L+R+P +F+      + SL  FRLT  A  L+  EL L    +  AV +L KLLMM++ + + +  +  LK DLGLP  F  T+   +P  F+ V+ +    L+L  W  E AVSA +   E      E +R    +  P+KF     P+G    +     + +F+++PY+SPY D S +   S   EK   GV+HE+LSLTL K+T  ++L   R+E         +  R+P +FY+SLK    ++ LRE Y++ +LV+   LV  ++K        R  + G+        R +G+ +     S VE+D    ED G  ++E       G  SD
Sbjct:   56 VAQAAVKRRKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKRFPGVFEVVEEGVY-SL-RFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDKRILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPGLELTHWDPELAVSAAEVAEEENRAREEQER-NLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFSHLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYVSLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALVAVPRFPRRGVPATSEEADRTNGAAQMLSEGSDVEDD----EDEGLSDMEDLISEISGGKSD 449
[Close]
BLAST of Vigun01g184800.1 vs. DB:Swiss
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.244e-31
Identity = 87/271 (32.10%), Postives = 138/271 (50.92%), Query Frame = 1 
Query:  331 FLRRYPTLFQEFPHPRWPSLPCFRLTDTAL--FLHSQELALHQAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFPNDFQFVKSNGVAS--LKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAFPMKFPRGY--GAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNS----DLMEKRVVGVLHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLK---CKTTTITLREGYQSGKLVDPH 1104
            FL ++P +F+ + HP    L C RLT  AL    H  E  L Q    DAV RL KL+MM+ +  + L  +   + + GLP+ FE +++   P  F+ +         +++       ++ A+++  E     +         +F + FP G+  G   ++  W  ++Q+LPY SPY D S  D  S    + +EKR V  +HELLSLT+ KK     +   R+ +NLP K      ++ GIFY+S +    K  T+ LREGY+ G+LV+P+
Sbjct:  104 FLLKFPHVFEIYEHPVQRILYC-RLTRKALDQIRHEHEAVLDQI--PDAVTRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIERVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVW--KWQRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPN 369
The following BLAST results are available for this feature:
BLAST of Vigun01g184800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 5
Match NameE-valueIdentityDescription
WTF9_ARATH7.204e-6035.34Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Ara... [more]
WTF1_ARATH1.393e-3628.93Protein WHAT'S THIS FACTOR 1 homolog, chloroplasti... [more]
WTF1_MAIZE5.555e-3630.22Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea... [more]
WTF1_ORYSJ2.443e-3529.68Protein WHAT'S THIS FACTOR 1 homolog, chloroplasti... [more]
RPD1_ARATH5.244e-3132.10Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 57..384
e-value: 1.6E-116
score: 388.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 396..439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..439

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun01g184800.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g184800.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g184800.1; organism=Vigna unguiculata; type=mRNA; length=2422bp
AGGATGATTGATGTTTATAAAGCTTATATTATTCCAAGAATAAAAAATAT
GGTTTTTGTTGGGCCGGTAAGCCTTATATTTTGGGCCGATGTTTTATTGG
ACAGTGGGTGAGGGCCCATTGGCTGACGGTGATGATGGCCGAACACGAAG
AGGGGTTAGGGGAAGATTGTTGCAAGGTTGGGAGATGAACAAAAATGGCG
TCACTCCGTGGATGAAGCAGCAATGGCGGGGCATAGTGAAAGTCCGTTTG
AAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGA
TCTCAAAGCGGCATGCCTCCTGAAAGACGCCATCAACCGCTCCTCCACCG
CCTTCCTCACGGCGAAATCTGTGGCAGACTGGCAGAAGCTCCTCGGCCTC
ACCGTCCCCGTCCTCCGCTTCCTCCGCCGCTACCCCACACTCTTTCAAGA
GTTCCCGCACCCGCGCTGGCCCTCTCTTCCCTGCTTCCGCCTCACCGACA
CTGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCACCAAGCTCACCAA
AACGACGCCGTCGAACGCCTCTCCAAGCTCCTCATGATGACCCGCTCACG
CGCCCTGTCACTCTATTCCCTCCACTCGCTGAAGTGGGACCTCGGCTTAC
CCGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCTAACGACTTCCAA
TTCGTCAAGTCCAACGGCGTCGCTTCGCTCAAACTAGCACGATGGCCCGA
GGAATACGCTGTGTCCGCGCTGCAGCAGAGAAACGAGTGTGGGACCCACT
ACCGGGAATTCAAGCGGGGACAATCCGCGTTGGCTTTTCCAATGAAGTTT
CCGAGGGGTTACGGCGCGCAGAAGAAGGTGATGACGTGGATGGATGAGTT
TCAGAAGCTGCCTTATGTTTCTCCCTATGTTGATTCCTCCAAGATTGATC
CCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTT
TTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTT
GAGGGATGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCCGGT
ATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACGACCACTATTACT
CTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGT
CCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATC
GCGGGGATGGGTCATTGAAACATGACGACAACAATTCGTTGGTGGAGAAT
GATGAGCTAAGAAGCGAGGATTCTGGGGAGGAAGAGGTTGAAACGAGTGA
TGAACTCTGTGAGGGTGAATCGAGTGATGAACTCTGCGAGGGTGAAGCGA
GTGAATAAGTTTTTTGGTGCTGTATTCTGTTTGTATGATACGAGCAACGG
GTATTCTCTTCAAAGATAATTTATTTCCTCCTCCGGTTTGCAGGAAATGT
TATAGGAGTGTAAAGAAGATAATTTCAGGGCAAGGAAGACGATCTCCCTT
CAAAAATTTGTTGCAAGCAAATGTTGTGTACCTGTGTCAGCGGTTTTAAT
CTATCTTGTCCGAGGCCAGTTTATTATCAAGTATGCTGGAGATCACTTAC
AGAACTCAAACTCGAAGCGAAAATGATTCATAGACATTATTTTGGCTGCT
CTATCAACTAATCATGTTACGGTAATCTTTATTTTTCCCAGTCTGGGTAT
ATGTCAACCAGCACTTACGTTTTTTATTGTATGAAAATTTTAGTTAAAAG
ATGACAGAAATTGAAGGATATTTTTTCTCTGTTGAGGATTTTTGCAACGA
AATATTATGGTGCACTCGGTGGTAGTATACTTACGGAGCTTAGAAACAAA
AATAAATAAATAAATCCCTATCTCCTTAACATGTCTATTCATTTTTTCAC
TCGATCACTTCAATGGCTTTATTCAAAGGAGGAATGGACTCACAGTAAGT
AGGACATTTCATTTATGGATCTTAAGGACTACATAGGTTTGGGTTTTGAA
TCTAGTAATCAAATCAATAATGGATTTGAGTGTCTTTTTGTTATGTAAGG
ATTGATGCTTATAATTTATGAAATTCACATGTTTGGCCACCGATGGATAA
CATGTTGCACTTATTATATGGTCCAAACTATGAAGAAAATCAAGTTTTGT
AAAATTCTAATCCAAAAGGCAATCTCCTACGACCGAATCTCATAAAAACG
TTAGGAAAACTATTGAGATTCCCTCATTACAAATTTCACGATGTCATAAG
AAAAAAGGAGATATGAAATAATCGCAGTGAATTTGGCCATACCAGATAAT
GGCATTTTTTGTTTGTATGTACCATTTTTAAATGACTCTGTGGTAATTAT
GCCACATCCTCCATCTGTTTGC
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protein sequence of Vigun01g184800.1_Vu_IT97K-499-35_v1.1

>Vigun01g184800.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g184800.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g184800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=440bp
MFYWTVGEGPLADGDDGRTRRGVRGRLLQGWEMNKNGVTPWMKQQWRGIV
KVRLKWVKNRSLDHVIDKETDLKAACLLKDAINRSSTAFLTAKSVADWQK
LLGLTVPVLRFLRRYPTLFQEFPHPRWPSLPCFRLTDTALFLHSQELALH
QAHQNDAVERLSKLLMMTRSRALSLYSLHSLKWDLGLPDSFEKTLVPNFP
NDFQFVKSNGVASLKLARWPEEYAVSALQQRNECGTHYREFKRGQSALAF
PMKFPRGYGAQKKVMTWMDEFQKLPYVSPYVDSSKIDPNSDLMEKRVVGV
LHELLSLTLHKKTKRNYLRSLRDELNLPHKFTRIFTRYPGIFYLSLKCKT
TTITLREGYQSGKLVDPHPLVRHRDKFYRVMQTGLLYRGDGSLKHDDNNS
LVENDELRSEDSGEEEVETSDELCEGESSDELCEGEASE*
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mRNA from alignment at Vu01:36511906..36515309-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun01g184800.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g184800.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g184800.1; organism=Vigna unguiculata; type=mRNA; length=3404bp; location=Sequence derived from: Vu01:36511906..36515309- (Vigna unguiculata
AGGATGATTGATGTTTATAAAGCTTATATTATTCCAAGAATAAAAAATAT
GGTTTTTGTTGGGCCGGTAAGCCTTATATTTTGGGCCGATGTTTTATTGG
ACAGTGGGTGAGGGCCCATTGGCTGACGGTGATGATGGCCGAACACGAAG
AGGGGTTAGGGGAAGATTGTTGCAAGGTTGGGAGATGAACAAAAATGGCG
TCACTCCGTGGATGAAGCAGCAATGGCGGGGCATAGTGAAAGTCCGTTTG
AAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGACAAGGAAACCGA
TCTCAAAGCGGCATGCCTCCTGAAAGACGCCATCAACCGCTCCTCCACCG
CCTTCCTCACGGCGAAATCTGTGGCAGACTGGCAGAAGCTCCTCGGCCTC
ACCGTCCCCGTCCTCCGCTTCCTCCGCCGCTACCCCACACTCTTTCAAGA
GTTCCCGCACCCGCGCTGGCCCTCTCTTCCCTGCTTCCGCCTCACCGACA
CTGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCACCAAGCTCACCAA
AACGACGCCGTCGAACGCCTCTCCAAGCTCCTCATGATGACCCGCTCACG
CGCCCTGTCACTCTATTCCCTCCACTCGCTGAAGTGGGACCTCGGCTTAC
CCGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCTAACGACTTCCAA
TTCGTCAAGTCCAACGGCGTCGCTTCGCTCAAACTAGCACGATGGCCCGA
GGAATACGCTGTGTCCGCGCTGCAGCAGAGAAACGAGTGTGGGACCCACT
ACCGGGAATTCAAGCGGGGACAATCCGCGTTGGCTTTTCCAATGAAGTTT
CCGAGGGGTTACGGCGCGCAGAAGAAGGTGATGACGTGGATGGATGAGTT
TCAGAAGCTGCCTTATGTTTCTCCCTATGTTGATTCCTCCAAGATTGATC
CCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTTCTGCACGAGCTT
TTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTACTTGAGGAGCTT
GAGGGATGAGTTGAATCTTCCGCACAAGTTTACCCGGATTTTCACCCGGT
ATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACGACCACTATTACT
CTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCCGCACCCTCTTGT
CCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGGGGCTTCTCTATC
GCGGGGATGGGTCATTGAAACATGACGACAACAATTCGTTGGTGGAGAAT
GATGAGCTAAGAAGCGAGGATTCTGGGGAGGAAGAGGTTGAAACGAGTGA
TGAACTCTGTGAGGGTGAATCGAGTGATGAACTCTGCGAGGGTGAAGCGA
GTGAATAAGTTTTTTGGTGCTGTATTCTGTTTGTATGATACGAGCAACGG
GTATTCTCTTCAAAGATAATTTATTTCCTCCTCCGGTTAGTAGTTCTGCT
CCTTACTAACTTGTAACTAGCTTGATTGCTTGGTTCTGTTATTATGTATC
ACACTGTAAGGAACCTGTGTTGACCCTAATATTTGTTTGATATGTCTTGC
CCGTAACAGTAGAACATGCCTGTAGTTTGCTATGTTGTTTTTAACTATTT
TAACTCATGCCCTCTGGGTGACCTATTTATTGTGTATCTGAACCTTAAAA
ATAAATTAGATCTGAACTTAAAAGTTCAGCGGTAGAGTGGAAATCCCTTT
CTGCTTTCTAGCTATGTTTGTGGATGGGGCTATTTTCTTTATAAACTGTA
AATATTCACGGAAGCCAGATGATCACTTGCTATTGCGTCTCTGCTTTAGG
TTGATAGATAATTGGATGTGCTTTTTGTCAAATTTTGAACTCTGATATCT
GTCGTGCTATTTTTTAGTTGTTCACGTAACTGGGTAAAGGGAACAGAGTT
CTTTTAAGTTAGAAACTTGCAGATACTAAGTAGCAACCAACTGTGGACAT
TATTAACCATGCCATACCAACAGGCTTCACCATTTTTGGCTAATGTCTAC
TAGATAATAGTGACATTTTGGTGGTATGGTTGCATCTCTTTGAGAGTTAT
GTAATAGTTAACTTGATTGATTTACATATTTACATTTCTGCTCACTCAAG
CCAGGTTCTGCTTGTATGGATTTGTGTGTACGTTTATCTTAATTTTTTTG
AGAAATAAATCATGTTAGAATGATAGAGAAATGCAGTATTTGGTATTCAA
TTGCACAGAAGGATTGAAAACAACTAGGATCCATGTACCTTTATTGGTAA
TGCGAATAGCACTCTACATCCACATGATCTGCTTCATTTGTGTTTGTAAA
TATATACTGGTGCTATGTCGGGTAGAAATGGACGGAGTTTATAATCCACA
TAGTCTTCTGAGTATTGCATGCATCATTAAAATAATCAGTAATGAACGAA
ATTTCTTTTCTATCTAGGTTTGCAGGAAATGTTATAGGAGTGTAAAGAAG
ATAATTTCAGGGCAAGGAAGACGATCTCCCTTCAAAAATTTGTTGCAAGC
AAATGTTGTGTACCTGTGTCAGCGGTTTTAATCTATCTTGTCCGAGGCCA
GTTTATTATCAAGTATGCTGGAGATCACTTACAGAACTCAAACTCGAAGC
GAAAATGATTCATAGACATTATTTTGGCTGCTCTATCAACTAATCATGTT
ACGGTAATCTTTATTTTTCCCAGTCTGGGTATATGTCAACCAGCACTTAC
GTTTTTTATTGTATGAAAATTTTAGTTAAAAGATGACAGAAATTGAAGGA
TATTTTTTCTCTGTTGAGGATTTTTGCAACGAAATATTATGGTGCACTCG
GTGGTAGTATACTTACGGAGCTTAGAAACAAAAATAAATAAATAAATCCC
TATCTCCTTAACATGTCTATTCATTTTTTCACTCGATCACTTCAATGGCT
TTATTCAAAGGAGGAATGGACTCACAGTAAGTAGGACATTTCATTTATGG
ATCTTAAGGACTACATAGGTTTGGGTTTTGAATCTAGTAATCAAATCAAT
AATGGATTTGAGTGTCTTTTTGTTATGTAAGGATTGATGCTTATAATTTA
TGAAATTCACATGTTTGGCCACCGATGGATAACATGTTGCACTTATTATA
TGGTCCAAACTATGAAGAAAATCAAGTTTTGTAAAATTCTAATCCAAAAG
GCAATCTCCTACGACCGAATCTCATAAAAACGTTAGGAAAACTATTGAGA
TTCCCTCATTACAAATTTCACGATGTCATAAGAAAAAAGGAGATATGAAA
TAATCGCAGTGAATTTGGCCATACCAGATAATGGCATTTTTTGTTTGTAT
GTACCATTTTTAAATGACTCTGTGGTAATTATGCCACATCCTCCATCTGT
TTGC
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Coding sequence (CDS) from alignment at Vu01:36511906..36515309-

>Vigun01g184800.1_Vu_IT97K-499-35_v1.1 ID=Vigun01g184800.1_Vu_IT97K-499-35_v1.1; Name=Vigun01g184800.1; organism=Vigna unguiculata; type=CDS; length=1320bp; location=Sequence derived from: Vu01:36511906..36515309- (Vigna unguiculata
ATGTTTTATTGGACAGTGGGTGAGGGCCCATTGGCTGACGGTGATGATGG
CCGAACACGAAGAGGGGTTAGGGGAAGATTGTTGCAAGGTTGGGAGATGA
ACAAAAATGGCGTCACTCCGTGGATGAAGCAGCAATGGCGGGGCATAGTG
AAAGTCCGTTTGAAATGGGTGAAGAACCGAAGCCTCGACCACGTCATCGA
CAAGGAAACCGATCTCAAAGCGGCATGCCTCCTGAAAGACGCCATCAACC
GCTCCTCCACCGCCTTCCTCACGGCGAAATCTGTGGCAGACTGGCAGAAG
CTCCTCGGCCTCACCGTCCCCGTCCTCCGCTTCCTCCGCCGCTACCCCAC
ACTCTTTCAAGAGTTCCCGCACCCGCGCTGGCCCTCTCTTCCCTGCTTCC
GCCTCACCGACACTGCACTTTTCCTACACTCCCAGGAACTCGCCCTCCAC
CAAGCTCACCAAAACGACGCCGTCGAACGCCTCTCCAAGCTCCTCATGAT
GACCCGCTCACGCGCCCTGTCACTCTATTCCCTCCACTCGCTGAAGTGGG
ACCTCGGCTTACCCGACTCCTTCGAGAAAACCCTCGTCCCCAACTTCCCT
AACGACTTCCAATTCGTCAAGTCCAACGGCGTCGCTTCGCTCAAACTAGC
ACGATGGCCCGAGGAATACGCTGTGTCCGCGCTGCAGCAGAGAAACGAGT
GTGGGACCCACTACCGGGAATTCAAGCGGGGACAATCCGCGTTGGCTTTT
CCAATGAAGTTTCCGAGGGGTTACGGCGCGCAGAAGAAGGTGATGACGTG
GATGGATGAGTTTCAGAAGCTGCCTTATGTTTCTCCCTATGTTGATTCCT
CCAAGATTGATCCCAACAGCGATTTGATGGAGAAGCGCGTGGTTGGGGTT
CTGCACGAGCTTTTGAGTTTGACTCTGCACAAGAAAACCAAGAGGAACTA
CTTGAGGAGCTTGAGGGATGAGTTGAATCTTCCGCACAAGTTTACCCGGA
TTTTCACCCGGTATCCCGGCATTTTTTACCTCTCATTGAAGTGTAAAACG
ACCACTATTACTCTCAGGGAAGGGTACCAGAGTGGGAAACTGGTTGACCC
GCACCCTCTTGTCCGACATAGAGATAAGTTCTACCGTGTCATGCAGACGG
GGCTTCTCTATCGCGGGGATGGGTCATTGAAACATGACGACAACAATTCG
TTGGTGGAGAATGATGAGCTAAGAAGCGAGGATTCTGGGGAGGAAGAGGT
TGAAACGAGTGATGAACTCTGTGAGGGTGAATCGAGTGATGAACTCTGCG
AGGGTGAAGCGAGTGAATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain