Vigun05g115200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium OX=4076 PE=2 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 3.084e-109 Identity = 154/265 (58.11%), Postives = 197/265 (74.34%), Query Frame = 1 Query: 1 MAETKLSLKEKKWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 MA ++ +++WSL MTALVTGGTRG+G+AIVEELA FGA V+ C+RSQ D+D+CLE+W+ KG V+G VCD+ QR+ LME+V S F+GKLNIL+NNA +I K+ ++TAED S +MGTNFE+SY+LCQLAHP LK SG S+VF SS AGV AVP+ SIYAASKGA+NQ T++LA EWAKD+IR NAVAP + T + ++ + K + R + R GEP E+S+LV +LCLP ASYITGQ+I DGGYTV Sbjct: 1 MAGREIGGGDRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQ-KKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIICVDGGYTV 264
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium OX=4076 GN=TR1 PE=1 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 5.095e-108 Identity = 147/268 (54.85%), Postives = 206/268 (76.87%), Query Frame = 1 Query: 1 MAETKLSL----KEKKWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYT 792 M E+K+S+ E +WSL TALVTGG++G+G+AIVEELA GA V+ C+R+++++D+CLE W+ KGLNV GSVCDLL +R +LM+TVA +F GKLNILVNNA + I K+ D+T +D + +MGTNFE++YHL Q+A+P LK S G+V+F+SS+AG A+P +S+Y+ASKGA+NQ T++LA EWAKDNIR N+VAPG ++T L ++ + + + + +T +GR G+P+E+SAL+AFLC PAASYITGQ+I ADGG+T Sbjct: 1 MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWADGGFT 268
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRNHF_ARATH (Tropinone reductase homolog At5g06060 OS=Arabidopsis thaliana OX=3702 GN=At5g06060 PE=2 SV=1) HSP 1 Score: 310.842 bits (795), Expect = 6.179e-106 Identity = 145/256 (56.64%), Postives = 193/256 (75.39%), Query Frame = 1 Query: 28 EKKWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 +K+WSL TALVTGGTRG+G A+VEELA+FGA VH C+R+QE+++ CL WK+ GL V+GSVCD DQR++L++ +S F GKLNIL+NN ++ K ++Y++E+ + +M TN ES++HL Q+AHP LK SG GS+VFISSVAG+ + SIY A+KGA+NQ TRNLA EWA DNIR N VAP + T L ++L++ + V SRT +GR+GEP+E+S+LVAFLCLPA+SYITGQVI DGG+TV Sbjct: 4 DKRWSLAGKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLVVSGSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYAKIMSTNLESAFHLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRTNCVAPWYIKTSLVETLLEKKE----FVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISVDGGFTV 255
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana OX=3702 GN=At1g07440 PE=1 SV=1) HSP 1 Score: 308.145 bits (788), Expect = 7.904e-105 Identity = 148/257 (57.59%), Postives = 193/257 (75.10%), Query Frame = 1 Query: 25 KEKKWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 + ++WSL A T LVTGGT+G+GHAIVEE A FGA +H CAR++ ++++CL +W+ KG VTGSVCD +R++LM+TV+S+F GKL+IL+NN SK +DYTAED S + TN ES+YHL QLAHP LK SG G+++F+SS+AGV + V SIY+A+KGA+NQ RNLA EWA D IRANAVAP + T L++++ D DE K+V SR +GR GEP+E+S+LVAFLC+PAASYITGQ I DGG TV Sbjct: 6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYD--DEFKKVVI---SRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVDGGLTV 257
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRN1_COCOF (Tropinone reductase OS=Cochlearia officinalis OX=270110 GN=TR PE=1 SV=1) HSP 1 Score: 301.982 bits (772), Expect = 3.003e-102 Identity = 151/266 (56.77%), Postives = 191/266 (71.80%), Query Frame = 1 Query: 1 MAETKLSLKEK-KWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 MA + S ++K +WSL MTALVTGG++G+G A+VEELA GA VH CAR + + + L +W++KG VT SVCD+ DQR++LMETV+S+F GKLNILVNNA I+K IDYT+ED S +M TN ESS+HL QLAHP LK SG GS+V ISSVA V V V SIY A+KGAMNQ RNLA EWA D+I+ N+V PG + T L+ + +E +K E T GR+GE E+S+LVA+LCLPAASY+TGQ I DGG++V Sbjct: 1 MANLRESSRDKSRWSLEGMTALVTGGSKGIGEAVVEELAMLGARVHTCARDETQLQESLREWQAKGFQVTTSVCDVSSRDQREKLMETVSSLFQGKLNILVNNAGTCITKPTIDYTSEDFSFLMSTNLESSFHLSQLAHPLLKSSGLGSIVLISSVASVVHVNVGSIYGATKGAMNQLARNLACEWASDSIKVNSVCPGFISTPLASNYF--RNEEFKKEVENIIPT--GRVGEANEVSSLVAYLCLPAASYVTGQTICVDGGFSV 262
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger OX=4079 GN=TR2 PE=2 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.477e-101 Identity = 139/252 (55.16%), Postives = 185/252 (73.41%), Query Frame = 1 Query: 34 KWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGY 789 +W+L TALVTGG+RG+G+ IVEELA GA+V+ C+R+Q+++D+CL QW+SKG NV SVCDL +R+ M+TV++ FHGKLNILVNNA I I K+ DYT ED S +M NFE++YHL LAHPFLK S G+VVFISS++G A+P ++Y A+KGAM+Q TR LA EWAKDNIR N V PG + T + + + ++ + + R + RMGEPKE++A+VAFLC PAASY+TGQ+I DGG+ Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENL-DKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVDGGF 254
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium OX=4076 GN=TR2 PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.189e-101 Identity = 142/251 (56.57%), Postives = 182/251 (72.51%), Query Frame = 1 Query: 34 KWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGG 786 +W+L TALVTGG+RG+G+ IVEELA GA+V+ C+R+Q++++ CL QW+SKG V SVCDL +R+ LM TVA+ FHGKLNILVNNA I I K+ DYT ED S +M NFE++YHL LAHPFLK S G+VVFISSV+G AVP ++Y A+KGAM+Q TR LA EWAKDNIR N V PG + T L + + ++ + + R + RMGEPKE++A+VAFLC PAASY+TGQ+I DGG Sbjct: 4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENL-NKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVDGG 253
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: SAG13_ARATH (Senescence-associated protein 13 OS=Arabidopsis thaliana OX=3702 GN=SAG13 PE=1 SV=1) HSP 1 Score: 299.286 bits (765), Expect = 2.630e-101 Identity = 152/257 (59.14%), Postives = 181/257 (70.43%), Query Frame = 1 Query: 25 KEKKWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 + +WSL MTALVTGG++G+G A+VEELA GA VH CAR + + + L +W++KG VT SVCD+ DQR +LMETV+S++ GKLNILVNN SI K +YTAED S VM TN ES++HL QLAHP LK SG GS+V ISS AGV V V SIY A+KGAMNQ RNLA EWA DNIR N+V P + T LS D DE +K EA T +GR+GE E+S LVAFLCLP+ASYITGQ I DGG TV Sbjct: 9 ENSRWSLGGMTALVTGGSKGIGEAVVEELAMLGAKVHTCARDETQLQERLREWQAKGFQVTTSVCDVSSRDQRVKLMETVSSLYQGKLNILVNNVGTSIFKPTTEYTAEDFSFVMATNLESAFHLSQLAHPLLKASGSGSIVLISSAAGVVHVNVGSIYGATKGAMNQLARNLACEWASDNIRTNSVCPWYITTPLSN---DFFDEEFK--KEAVRTTPMGRVGEANEVSPLVAFLCLPSASYITGQTICVDGGATV 260
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRNH4_ARATH (Tropinone reductase homolog At2g29170 OS=Arabidopsis thaliana OX=3702 GN=At2g29170 PE=3 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 3.810e-101 Identity = 149/266 (56.02%), Postives = 191/266 (71.80%), Query Frame = 1 Query: 1 MAETKLSLKEK-KWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVLSKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 MA+ + +L++K +WSL MTALVTGG++GLG A+VEELA GA VH CAR++ + +C+ +W++KG VT SVCD+ DQR++LME VASIF GKLNILVNNA I+K +YTA+D S +M TN +S++HL QLAHP LK SG GS+V +SS AGV + V SIY A+KGAMNQ +NLA EWA+DNIR N+V P + T L +DE K E +T +GR+G E+S+LVAFLC PAASYITGQ I DGG+TV Sbjct: 1 MAKAEENLRDKCRWSLGGMTALVTGGSKGLGEAVVEELAMLGARVHTCARNETQLQECVREWQAKGFEVTTSVCDVSSRDQREKLMENVASIFQGKLNILVNNAGTGITKPTTEYTAQDYSFLMATNLDSAFHLSQLAHPLLKASGSGSIVLMSSTAGVVHINVGSIYGATKGAMNQLAKNLACEWARDNIRVNSVCPWFIATPLYL-----NDEELK--KEVERKTPMGRVGNANEVSSLVAFLCFPAASYITGQTICVDGGFTV 259
BLAST of Vigun05g115200.1 vs. DB:Swiss
Match: TRNHC_ARATH (Tropinone reductase homolog At2g29360 OS=Arabidopsis thaliana OX=3702 GN=SDR PE=1 SV=1) HSP 1 Score: 297.745 bits (761), Expect = 1.464e-100 Identity = 153/267 (57.30%), Postives = 192/267 (71.91%), Query Frame = 1 Query: 1 MAETKLSLKEK-KWSLHAMTALVTGGTRGLGHAIVEELAEFGAAVHVCARSQEDIDKCLEQWKSKGLNVTGSVCDLLYPDQRKRLMETVASIFHGKLNILVNNAAISISKKIIDYTAEDISTVMGTNFESSYHLCQLAHPFLKQSGYGSVVFISSVAGVKAVPVLSIYAASKGAMNQFTRNLALEWAKDNIRANAVAPGPVMTVL-SKSLMDSSDEGYKIVTEAASRTFVGRMGEPKEISALVAFLCLPAASYITGQVIVADGGYTV 795 MA+T SL++K +WSL MTALVTGG++G+G A+VEELA GA +H CAR + + + L +W++KG VT SVCD+ D+R++LMETV++IF GKLNILVNN I K + +TAED S M TN ES++HL QLAHP LK SG GS+V ISSV+GV V SIY SKGAMNQ RNLA EWA DNIR N+V P + T L ++SL S+E ++ E SR +GR+GE E+S+LVAFLCLPAASYITGQ I DGG+TV Sbjct: 1 MAKTGESLRDKPRWSLVGMTALVTGGSKGIGEAVVEELATLGARIHTCARDETQLQESLRKWQAKGFQVTTSVCDVSSRDKREKLMETVSTIFEGKLNILVNNVGTCIVKPTLQHTAEDFSFTMATNLESAFHLSQLAHPLLKASGSGSIVLISSVSGVVHVNGASIYGVSKGAMNQLGRNLACEWASDNIRTNSVCPWFIETPLVTESL---SNEEFR--KEVESRPPMGRVGEVNEVSSLVAFLCLPAASYITGQTICVDGGFTV 262 The following BLAST results are available for this feature:
BLAST of Vigun05g115200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun05g115200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g115200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g115200.1; organism=Vigna unguiculata; type=mRNA; length=1269bpback to top protein sequence of Vigun05g115200.1_Vu_IT97K-499-35_v1.1 >Vigun05g115200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g115200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g115200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=266bpback to top mRNA from alignment at Vu05:12204499..12206227- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun05g115200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g115200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g115200.1; organism=Vigna unguiculata; type=mRNA; length=1729bp; location=Sequence derived from: Vu05:12204499..12206227- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu05:12204499..12206227- >Vigun05g115200.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g115200.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g115200.1; organism=Vigna unguiculata; type=CDS; length=798bp; location=Sequence derived from: Vu05:12204499..12206227- (Vigna unguiculataback to top |