Vigun05g253600.1

Transcript Overview
NameVigun05g253600.1
Unique NameVigun05g253600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1269
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu05supercontigVu05:44833908..44836454 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL094Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL065Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL423Pisum sativum Cameor genome v1aPisum sativum
psvuL792Pisum sativum Cameor genome v1aPisum sativum
pvvuL180Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL711Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL402Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL044Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0066Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0074Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0802Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL530Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0377Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0894Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1022Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0109Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0280Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0739Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0993Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1056Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1110Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL116Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL594Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR395Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR420Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL201Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL173Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL724Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL682Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL218Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL105Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL305Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL246Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR247Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR261Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR275Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL044Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL498Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL059Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL515Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL039Cicer arietinum
carvuL488Cicer arietinum
ccavuL099Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL387Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR475Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR483Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR494Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR420Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR463Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR479Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL470Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL523Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL486Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL529Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL034Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL161Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL422Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR316Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR337Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigan.06G194000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014642012.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Ca_02579Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_06G01297.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_30226Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_14630Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat07G0604500-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.6g032400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr11.1415.1.62113170Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014666714.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Hedin2.R1.1g037200.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_00342.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
PvulFLAVERTChr05.907Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
LR48_mrnaVigan05g185000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.011G069800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_01166.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat05G0778600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.06G167200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr05.2389Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_07G00448.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va05G050690.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cc_v2.0_23601.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
jg43606.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
LR48_mrnaVigan08g158600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.07G055800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.07G041900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va08G064050.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr11.1000452Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.6g025120.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vfaba.Tiffany.R1.1g025160.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_014012Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_03273Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-XM_004486993.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.L002465.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Psat7g221360.1Pisum sativum Cameor genome v1aPisum sativum
jg9200.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cc_v2.0_09344.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_11302Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_022068Cajanus cajan Asha genome v1.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun11g150000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g150000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun05g253600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun05g253600Vigun05g253600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g253600.1_Vu_IT97K-499-35_v1.1Vigun05g253600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun05g253600.1Vigun05g253600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g253600.1.v1.1.five_prime_UTR.1Vigun05g253600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g253600.1.v1.1.CDS.1Vigun05g253600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g253600.1.v1.1.CDS.2Vigun05g253600.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun05g253600.1.v1.1.CDS.3Vigun05g253600.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun05g253600.1.v1.1.three_prime_UTR.1Vigun05g253600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL1_ARATH (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.763e-10
Identity = 26/59 (44.07%), Postives = 41/59 (69.49%), Query Frame = 1 
Query:  442 SPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNSSIQWS 618
            SP +++ R+ RYR K+  R F K I+YA RK  A+ RPRI+GRFA+  ++D+ ++  +S
Sbjct:  282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDEEANQAFS 340
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL3_ARATH (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.937e-9
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 1 
Query:  430 ACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFAR 579
            A + SP E++ R+ RYR KR  R F K I+YA RK  A+ RPRI+GRFA+
Sbjct:  221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAK 270
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL4_ARATH (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 60.4622 bits (145), Expect = 2.445e-9
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 1 
Query:  418 GMNRACRYSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNSSI 609
            G  RA   +  E++ R+ RYR KR  R F K I+YA RK  A+ RPRI+GRFA+  + ++++ +
Sbjct:  283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNESNDV 346
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: CO3_ORYSJ (Zinc finger protein CO3 OS=Oryza sativa subsp. japonica OX=39947 GN=CO3 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 1.088e-8
Identity = 24/48 (50.00%), Postives = 34/48 (70.83%), Query Frame = 1 
Query:  451 EKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEID 594
            +++ R+ RYR KR  R F K I+YA RK  A++RPRI+GRFA+  + D
Sbjct:  267 DREARVHRYREKRKTRRFEKTIRYASRKAYAETRPRIKGRFAKRSDTD 314
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL5_ARATH (Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis thaliana OX=3702 GN=COL5 PE=2 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.278e-8
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 1 
Query:  442 SPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKN 600
            S  +++ R+ RYR KR  R F K I+YA RK  A+SRPRI+GRFA+  E + +
Sbjct:  281 SSMDREARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTETEND 333
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL2_ARATH (Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis thaliana OX=3702 GN=COL2 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 1.903e-8
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:  442 SPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFAR 579
            +P E++ R+ RYR K+  R F+K I+YA RK  A+ RPRI+GRFA+
Sbjct:  274 TPMEREARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAK 319
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: HD1_ORYSJ (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 8.953e-8
Identity = 25/75 (33.33%), Postives = 41/75 (54.67%), Query Frame = 1 
Query:  439 YSPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNSSIQWSQSGGXXXXXXXXNWF 663
            +S  +++ R+ RYR K+  R F K I+Y  RK  A++RPRI+GRFA+  ++       +S +   +       WF
Sbjct:  321 FSSMDREARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSDVQIEVDQMFSTAALSDGSYGTVPWF 395
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: CONS_ARATH (Zinc finger protein CONSTANS OS=Arabidopsis thaliana OX=3702 GN=CO PE=1 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 1.096e-7
Identity = 24/48 (50.00%), Postives = 33/48 (68.75%), Query Frame = 1 
Query:  442 SPEEKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARND 585
            SP +++ R+ RYR KR  R F K I+YA RK  A+ RPR+ GRFA+ +
Sbjct:  302 SPMDREARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: GHD7_ORYSJ (Transcription factor GHD7 OS=Oryza sativa subsp. japonica OX=39947 GN=GHD7 PE=1 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 2.614e-7
Identity = 21/46 (45.65%), Postives = 34/46 (73.91%), Query Frame = 1 
Query:  451 EKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDE 588
            E++ ++ RY+ KR +R + K+I+YA RK  A+ RPR+RGRFA+  +
Sbjct:  189 EREAKLMRYKEKRKKRCYEKQIRYASRKAYAEMRPRVRGRFAKEPD 234
[Close]
BLAST of Vigun05g253600.1 vs. DB:Swiss
Match: COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 52.7582 bits (125), Expect = 6.926e-7
Identity = 24/43 (55.81%), Postives = 30/43 (69.77%), Query Frame = 1 
Query:  451 EKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFAR 579
            E++ R+ RYR KR  R F KKI+Y  RK  AD RPR++GRF R
Sbjct:  270 EREARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVR 312
The following BLAST results are available for this feature:
BLAST of Vigun05g253600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
COL1_ARATH5.763e-1044.07Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis... [more]
COL3_ARATH1.937e-954.00Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis... [more]
COL4_ARATH2.445e-942.19Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis... [more]
CO3_ORYSJ1.088e-850.00Zinc finger protein CO3 OS=Oryza sativa subsp. jap... [more]
COL5_ARATH1.278e-849.06Zinc finger protein CONSTANS-LIKE 5 OS=Arabidopsis... [more]
COL2_ARATH1.903e-852.17Zinc finger protein CONSTANS-LIKE 2 OS=Arabidopsis... [more]
HD1_ORYSJ8.953e-833.33Zinc finger protein HD1 OS=Oryza sativa subsp. jap... [more]
CONS_ARATH1.096e-750.00Zinc finger protein CONSTANS OS=Arabidopsis thalia... [more]
GHD7_ORYSJ2.614e-745.65Transcription factor GHD7 OS=Oryza sativa subsp. j... [more]
COL8_ARATH6.926e-755.81Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010402CCT domainPFAMPF06203CCTcoord: 154..194
e-value: 1.1E-17
score: 63.8
IPR010402CCT domainPROSITEPS51017CCTcoord: 152..194
score: 15.557

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun05g253600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g253600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g253600.1; organism=Vigna unguiculata; type=mRNA; length=1269bp
AGGTGTTTAAATGCAGACATTTGCACTCACTGAACCATTCATTTATCTTC
TTCATTCCTTCCATCACTTTTCTCATAAACCTCTCATTCCACCATGTTTG
AACAATCTTCCACTGCATCACCCATTCcttcaccttcttcttcttcttat
ctcttcCCTCACCTCACTCAATTCGACACCCTCCCCCAACTCAACAACTC
CCACACCAGTTACTGCTACAACAATTATGGTGGCTATAGCAGTAACTGTA
GCAGTGGCTATAGCAGTTATGGTGCCTCTCCCACTTCTGTTCCCACCTTT
ATGCAGAGGAGTGTCAGTAGTAACTCCTTCAACTACACCAACAATGCCAC
CCACCACCCTCTTTCTGCTTTCTTCGCCGAATTGCTCGACTCTCGTGATG
CTCCTGTTAGGAGAGTTTGCAGCACCGGTGATCTCCAGGGGATTAATGGA
ACTCAACACAATCACCTCTCGGATAGTCCGTTATCAAGCGAAAGCAGCAT
GATCATAGAAGGTATGAACAGAGCTTGCAGATATAGCCCAGAGGAGAAGA
AGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAATTTCAAC
AAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGCAGGCCACG
CATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAACAGTTCAA
TTCAGTGGAGCCAAAGTGGTGGAGATGAAGAGGATGAAGAAGATGAGAAT
TGGTTCACCATCTTAGATTCCTTAGTTGCAGCAAATTTTGCTCAAGAGTC
TCAAGGAAGTTGTTCCTCCTATGGTGTATTCTACTAGAATAAAATTGCAT
GTTTGATGAGATAACTCAGTTGTTTTTCCATGTTGAAAGAAGTATTGTGG
TGCACTTTGTTTAGGTTAGATAAAAGTAGTAATGTAAATATAGTTCTCTG
AGTCGTCAATGCAATTATTATTAGCCTTTTAATCTAGGGTGATGTTTTTG
AGTGCCCTGTAACTTTTTATAGGATTCAGCAGCAATGTATTATTAGATGA
AAACTTTGGCAATAGTTGTTGTACTTGTGGTTAAAGTCTGCACCATGTAT
TATCACATCCCTTTTGTTGAAGCACTTGCTTGAAAAGAGAATAGAAAGTG
ACCATCACTTCCATTGCACTCTGGGGGAATGAATGTACCTATCACTTTTT
TACTCACTGTGGATTTGGAACACAACAACAATGAAAAATTCCCAATTGCA
ATACCCATGAAGCAGTTGT
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protein sequence of Vigun05g253600.1_Vu_IT97K-499-35_v1.1

>Vigun05g253600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g253600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g253600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=248bp
MFEQSSTASPIPSPSSSSYLFPHLTQFDTLPQLNNSHTSYCYNNYGGYSS
NCSSGYSSYGASPTSVPTFMQRSVSSNSFNYTNNATHHPLSAFFAELLDS
RDAPVRRVCSTGDLQGINGTQHNHLSDSPLSSESSMIIEGMNRACRYSPE
EKKVRIERYRSKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKN
SSIQWSQSGGDEEDEEDENWFTILDSLVAANFAQESQGSCSSYGVFY*
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mRNA from alignment at Vu05:44833908..44836454+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun05g253600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g253600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g253600.1; organism=Vigna unguiculata; type=mRNA; length=2547bp; location=Sequence derived from: Vu05:44833908..44836454+ (Vigna unguiculata
AGGTGTTTAAATGCAGACATTTGCACTCACTGAACCATTCATTTATCTTC
TTCATTCCTTCCATCACTTTTCTCATAAACCTCTCATTCCACCATGTTTG
AACAATCTTCCACTGCATCACCCATTCCTTCACCTTCTTCTTCTTCTTAT
CTCTTCCCTCACCTCACTCAATTCGACACCCTCCCCCAACTCAACAACTC
CCACACCAGTTACTGCTACAACAATTATGGTGGCTATAGCAGTAACTGTA
GCAGTGGCTATAGCAGTTATGGTGCCTCTCCCACTTCTGTTCCCACCTTT
ATGCAGAGGAGTGTCAGTAGTAACTCCTTCAACTACACCAACAATGCCAC
CCACCACCCTCTTTCTGCTTTCTTCGCCGAATTGCTCGACTCTCGTGATG
CTCCTGTTAGGAGAGTTTGCAGCACCGGTGATCTCCAGGTACATTTTTTT
TTTCTCTTCATTTCATGCACTCACTCACATGTGAAGAATCTTTGTTCTGT
GTGCAATCTGGTTAACTTATAACACACAATAACATAGCTTTGTGAAGAAT
CTTTGCTGGGTGTGCAAACTGGTTGAGTAAGAACTCTGGTAGATTGAAAA
GACCATGACAGAGATAAATTGCAGATTTTGAAAATTTTAATTTTGATGTC
ACCCCATCTTTTGTACCCGTTTACTCTTTCACTTCGAACTTTATTTTCGG
CTTAAAATTATTGTACGGTTTGTTTGTGAATAGTGAAGTTTTTTCTGACA
CTGGTACGTAATAAGGACTGGTGAATAGGTAAGGCATAGCCGTGAATGAA
AGGAGTTTGATTTAATGTGTCAAAGAATAGAAGACTGGTGTGTTCATCGT
ACCTATGTGGCTATGTTCAATTGATTTGATCATTGGATTGTTTTAGTACT
AGAATTTTATGTCAAGTAGAATCAGGAAGATTCTTTGTGTTACTTTTTGC
ATATGCTTACTTCCTCTTCATTATCTGTTGTGTTGTAACATGATTTTTTT
TTTTTTTTTATGATTTTAATGACATGGAACGTTTTGTTTAGGGGATTAAT
GGAACTCAACACAATCACCTCTCGGATAGTCCGTTATCAAGCGAAAGCAG
CATGATCATAGAAGGTATGAACAGAGCTTGCAGATATAGCCCAGAGGAGA
AGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAATTTC
AACAAGAAAATTAAGGTTTACTATTTTTTTTTTAAAACGTTTTGACTTAC
ACTCACTATTTTTATCATATTTATTTACTTAGAGTAGCTTTCAATGTTTT
ACTGTTGTGAATAAAGTCCTACCTGGGTTGCATCTATTAAACTTTTATGC
ACTAATGTATATTCCAAAAGAACCACAAACTTTTAGTAGCTTTCTATGTT
TTACTGTTGCGAATAGAGTCCTGTGTGCTGCATCTGCATCAACCAAAAAT
ATATATATTCCTCAAGGACCACAAATCTAAGAATATAGTGGACAACACTG
TGCTTGGCTTCATGATCTATGATTAAAAATACAATCATGTCCAAGGTTGA
ATTGGAAGTTAAGAGACACAGTTAAAAGATAATCCATTTGACAGAATCCT
GATTAAGAATAGAACTGAAACATTTTCTATATAACAGGACCGGAATTTGT
CAATTTGTTCCCCACACTCTCTGCTTGATAACAGGACCAGAATTTAGTTA
AGCATGAAAATCTTCCCACAGATTTTGTCTTGTTCTTTAAGATTACTACT
AGGATCAATCAAACTTGTAATTAACAACATACCCTTTATATTACAATTCA
ATTTATAGTGTAATACTATAATATTTTCAATGGTCCATCACTTGTGAAAA
ACCAGTGTGAAAATGTTAACTTGTTTTTGCATGGAATCAGTATGCTTGCA
GGAAAACATTGGCAGACAGCAGGCCACGCATCAGAGGAAGGTTTGCAAGG
AATGATGAAATTGACAAGAACAGTTCAATTCAGTGGAGCCAAAGTGGTGG
AGATGAAGAGGATGAAGAAGATGAGAATTGGTTCACCATCTTAGATTCCT
TAGTTGCAGCAAATTTTGCTCAAGAGTCTCAAGGAAGTTGTTCCTCCTAT
GGTGTATTCTACTAGAATAAAATTGCATGTTTGATGAGATAACTCAGTTG
TTTTTCCATGTTGAAAGAAGTATTGTGGTGCACTTTGTTTAGGTTAGATA
AAAGTAGTAATGTAAATATAGTTCTCTGAGTCGTCAATGCAATTATTATT
AGCCTTTTAATCTAGGGTGATGTTTTTGAGTGCCCTGTAACTTTTTATAG
GATTCAGCAGCAATGTATTATTAGATGAAAACTTTGGCAATAGTTGTTGT
ACTTGTGGTTAAAGTCTGCACCATGTATTATCACATCCCTTTTGTTGAAG
CACTTGCTTGAAAAGAGAATAGAAAGTGACCATCACTTCCATTGCACTCT
GGGGGAATGAATGTACCTATCACTTTTTTACTCACTGTGGATTTGGAACA
CAACAACAATGAAAAATTCCCAATTGCAATACCCATGAAGCAGTTGT
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Coding sequence (CDS) from alignment at Vu05:44833908..44836454+

>Vigun05g253600.1_Vu_IT97K-499-35_v1.1 ID=Vigun05g253600.1_Vu_IT97K-499-35_v1.1; Name=Vigun05g253600.1; organism=Vigna unguiculata; type=CDS; length=744bp; location=Sequence derived from: Vu05:44833908..44836454+ (Vigna unguiculata
ATGTTTGAACAATCTTCCACTGCATCACCCATTCCTTCACCTTCTTCTTC
TTCTTATCTCTTCCCTCACCTCACTCAATTCGACACCCTCCCCCAACTCA
ACAACTCCCACACCAGTTACTGCTACAACAATTATGGTGGCTATAGCAGT
AACTGTAGCAGTGGCTATAGCAGTTATGGTGCCTCTCCCACTTCTGTTCC
CACCTTTATGCAGAGGAGTGTCAGTAGTAACTCCTTCAACTACACCAACA
ATGCCACCCACCACCCTCTTTCTGCTTTCTTCGCCGAATTGCTCGACTCT
CGTGATGCTCCTGTTAGGAGAGTTTGCAGCACCGGTGATCTCCAGGGGAT
TAATGGAACTCAACACAATCACCTCTCGGATAGTCCGTTATCAAGCGAAA
GCAGCATGATCATAGAAGGTATGAACAGAGCTTGCAGATATAGCCCAGAG
GAGAAGAAGGTGAGAATTGAGAGATACAGAAGCAAGAGGAACCAGAGGAA
TTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGCA
GGCCACGCATCAGAGGAAGGTTTGCAAGGAATGATGAAATTGACAAGAAC
AGTTCAATTCAGTGGAGCCAAAGTGGTGGAGATGAAGAGGATGAAGAAGA
TGAGAATTGGTTCACCATCTTAGATTCCTTAGTTGCAGCAAATTTTGCTC
AAGAGTCTCAAGGAAGTTGTTCCTCCTATGGTGTATTCTACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR010402CCT_domain
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding