Vigun07g064100.1

Transcript Overview
NameVigun07g064100.1
Unique NameVigun07g064100.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1989
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu07supercontigVu07:7428798..7433140 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL027Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL330Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL254Pisum sativum Cameor genome v1aPisum sativum
psvuL562Pisum sativum Cameor genome v1aPisum sativum
psvuL587Pisum sativum Cameor genome v1aPisum sativum
crvuL293Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL602Pisum sativum Cameor genome v1aPisum sativum
pvvuL038Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL394Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL406Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL627Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL213Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0320Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL303Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0418Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0430Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0467Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0737Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0761Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0914Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0690Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0913Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL370Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR494Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR511Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL400Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL371Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL640Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL596Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL254Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL152Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL639Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL543Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL804Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR331Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR364Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL065Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL190Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL270Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL314Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL389Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL061Cicer arietinum
carvuL214Cicer arietinum
carvuL288Cicer arietinum
ccavuL105Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL226Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL304Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR584Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR614Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR572Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR654Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL358Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL595Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL375Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL600Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL038Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL552Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR386Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR423Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.08G203300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058883146.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
evm.model.Chr07.2156Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr01.1187Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr07.1001414Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.3g044720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Phvul.007G225700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_08G02163.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat03G0148900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Phvul.001G183900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
jg31897.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Psat6g078000.1Pisum sativum Cameor genome v1aPisum sativum
rna-XM_014640143.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigst.04G217600.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
LR48_mrnaVigan02g074700Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_00740Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va03G073940.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_05342.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_07801.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058915214.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_04G02444.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.08G290200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014657765.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Psat06G0209800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vfaba.Hedin2.R1.5g144120.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-KK1_010212Cajanus cajan Asha genome v1.0Cajanus cajan
Vfaba.Tiffany.R1.3g036080.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004494051.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg1249.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.5g115960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Psat3g038120.1Pisum sativum Cameor genome v1aPisum sativum
Cc_v2.0_07839.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va02G018440.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun07g064100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun07g064100Vigun07g064100_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g064100.1Vigun07g064100.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun07g064100.1_Vu_IT97K-499-35_v1.1Vigun07g064100.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g064100.1.v1.1.five_prime_UTR.1Vigun07g064100.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g064100.1.v1.1.CDS.1Vigun07g064100.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.2Vigun07g064100.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.3Vigun07g064100.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.4Vigun07g064100.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.5Vigun07g064100.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.6Vigun07g064100.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.7Vigun07g064100.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.8Vigun07g064100.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun07g064100.1.v1.1.CDS.9Vigun07g064100.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g064100.1.v1.1.three_prime_UTR.1Vigun07g064100.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP7_ARATH (Polyadenylate-binding protein 7 OS=Arabidopsis thaliana OX=3702 GN=PAB7 PE=2 SV=1)

HSP 1 Score: 525.398 bits (1352), Expect = 0.000e+0
Identity = 254/431 (58.93%), Postives = 335/431 (77.73%), Query Frame = 1
Query:   34 SSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDRILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQ-QARLNGSPATVIPPGFTPYFYPNVTSHVFQSGLLYQPLGLGSGWRANDFTPPTRP 1323
            +SLYVGDLHP +T+  L+ AF EF+SL+SVR+C+D+ +  SL YGY NF+S+QDAN AI+ KNNS L GK+IRVMWS R P+ R++G GNVFVKNL ES+ NAVL D+F+K+GN++S KV   +DGKS+GYGFVQFE E++A++AI+ LN + V DK+IYVGKF++K DR+ P  + KYTNLY+KNLD+D++E LLREKF+ FGKI+SLAIAKD+N L +G+AFVN+D+P+DAR+A ET+NG++FGSK LYV RAQKKAEREQLL  QF+EK +EQ   +K SN+YVKN++ AV E+ELR  FS CGTITS K+M +EKG SKGFGFVCFS PEEAI A+ TF+G MF+GKPLY+A AQ+KEDRK QL++ +  + +AR + S A+V P  + P +Y N        G++YQ   L   W++ +    + P
Sbjct:   24 ASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVKP--EEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRVEARKSSSSASVNPGTYAPLYYTNT-----HPGMVYQSYPL--MWKSANMIGSSYP 445          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP2_ARATH (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PAB2 PE=1 SV=1)

HSP 1 Score: 409.453 bits (1051), Expect = 6.503e-136
Identity = 202/389 (51.93%), Postives = 272/389 (69.92%), Query Frame = 1
Query:    4 AVPATVAAA------QSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDRILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYA 1152
            + PAT   A       +SLYVGDL  ++TD+QLF AF +  ++ +VRVCRD +TR SL YGYVNF + QDA RAI+  N   L+GK IRVM+SHRDP+ R+SG GN+F+KNL ESID+  LHD F  +GN++S KV V   G+SKGYGFVQ+ +EESA  AIEKLNG  + DKQ+YVG F+R+ +R      +K+TN+Y+KNL    T+  L+  F  +GKI S  + KD  G SKGF FVN+++ DDA +A+E++NG +F  K  YV RAQKK+ERE  L  ++E+  KE   K + SNLYVKN+D ++ +++L+++FS  GT+TS KVMR+  G SKG GFV F+ PEEA +AMS   G M   KPLY+A AQRKEDR+ +L+  ++
Sbjct:   20 SAPATSGGATATQFGNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMIESKPLYVAIAQRKEDRRVRLQAQFS 408          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP8_ARATH (Polyadenylate-binding protein 8 OS=Arabidopsis thaliana OX=3702 GN=PAB8 PE=1 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 4.723e-130
Identity = 204/421 (48.46%), Postives = 278/421 (66.03%), Query Frame = 1
Query:   34 SSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDRILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPAT-----VIPPGFTP-----YFYPNVTSHVFQSGLLYQ 1266
            +SLYVGDL   +TD+QLF+AF +   + SVRVCRD  TR SL YGYVN+ + QDA+RA+   N   L G+ IRVM+S RDP+ RKSG GN+F+KNL +SID+  LH+ F  +G +LS KV V   G+SKGYGFVQ++++E+A  AI+KLNG  + DKQ+YVG FV K  R   G   K+TN+Y+KNL   +++  L + F  FG   S  I +D  G SKGF FVN+++ DDA +A++ +NG  F  K  +V +AQKK+ERE  L  +FE+  KE   KS+GSNLYVKN+D++V + +LR+ F+  GTITS KVMR+  G+S+G GFV FS PEEA +A++   G M   KPLY+A AQRKEDRK +L+  ++ Q   +N  PA      + PPG  P     ++     + + Q G  YQ
Sbjct:   45 TSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFS-QMRPVNMPPAVGPRMQMYPPGGPPMGQQLFYGQGPPAMIPQPGFGYQ 464          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens OX=9606 GN=PABPC4 PE=1 SV=1)

HSP 1 Score: 389.423 bits (999), Expect = 6.959e-128
Identity = 198/405 (48.89%), Postives = 271/405 (66.91%), Query Frame = 1
Query:   34 SSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDRI--LPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPPGFTP----YFYPNV 1230
            +SLYVGDLH D+T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK IR+MWS RDP+ RKSG GNVF+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGY FV FE++E+A+ AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   ++ +  L+E FS FGK +S+ + +D NG SKGF FV+Y+  +DA KA+E MNG +   K ++V RAQKK ER+  L  +FE+ ++E+I + +G NLY+KN+DD + +++LR  FS  G+ITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+RK  L   Y  + A +   PA  I   F P    YF P V
Sbjct:   11 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTNQYMQRVAGMRALPANAILNQFQPAAGGYFVPAV 413          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP1_MOUSE (Polyadenylate-binding protein 1 OS=Mus musculus OX=10090 GN=Pabpc1 PE=1 SV=2)

HSP 1 Score: 388.267 bits (996), Expect = 1.751e-127
Identity = 191/399 (47.87%), Postives = 268/399 (67.17%), Query Frame = 1
Query:   10 PATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDR--ILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP 1200
            P+  +   +SLYVGDLHPD+T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK +R+MWS RDP+ RKSG GN+F+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGYGFV FE++E+A  AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   D+ +  L+E F  FG  +S+ +  D++G SKGF FV+++  +DA+KA++ MNG +   K +YV RAQKK ER+  L  +FE+ ++++I + +G NLYVKN+DD + ++ LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+R+  L   Y  + A +   P  VI P
Sbjct:    3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINP 399          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP1_RAT (Polyadenylate-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Pabpc1 PE=1 SV=1)

HSP 1 Score: 388.267 bits (996), Expect = 1.888e-127
Identity = 191/399 (47.87%), Postives = 268/399 (67.17%), Query Frame = 1
Query:   10 PATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDR--ILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP 1200
            P+  +   +SLYVGDLHPD+T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK +R+MWS RDP+ RKSG GN+F+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGYGFV FE++E+A  AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   D+ +  L+E F  FG  +S+ +  D++G SKGF FV+++  +DA+KA++ MNG +   K +YV RAQKK ER+  L  +FE+ ++++I + +G NLYVKN+DD + ++ LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+R+  L   Y  + A +   P  VI P
Sbjct:    3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINP 399          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis OX=8364 GN=epabp PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 6.540e-127
Identity = 203/441 (46.03%), Postives = 278/441 (63.04%), Query Frame = 1
Query:   34 SSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDRILPGYDSK---YTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPPGFTP--YFYPNV---TSHVFQSGLLYQPLGLGSGWRANDFTPPTRPFQP 1332
            +SLYVGDLHPD+T+  L++ F     + S+RVCRD  TR SL Y Y+NF    DA RA+   N   + G+ IR+MWS RDP  RKSG GNVF+KNL ESIDN  L+D F  +GN+LS KVV  D+  S+GYGFV FE++E+AN AI+ +NG  + D++++VG F  + +R L  Y +K   +TN+YIKN   D+ +  LRE FS FG  +S+ +  DD G S+GF FVNY + ++A+KA+  MNG +   + +YV RAQK+ ER+  L  +FE+ ++E+I + +G NLYVKN+DD + +  LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+RK  L   Y  + A +   P  ++     P  YF P +    +  F S     P+     W ++   PP   +QP
Sbjct:   11 ASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVC-DEHGSRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRREREL-EYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVM-TEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQYMQRLATMRAMPGPLLGSFQQPANYFLPAMPQPPNRTFYSPNPVAPVRQAPQWTSHQSRPPQ--YQP 446          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP1_HUMAN (Polyadenylate-binding protein 1 OS=Homo sapiens OX=9606 GN=PABPC1 PE=1 SV=2)

HSP 1 Score: 386.726 bits (992), Expect = 6.663e-127
Identity = 190/399 (47.62%), Postives = 268/399 (67.17%), Query Frame = 1
Query:   10 PATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDR--ILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP 1200
            P+  +   +SLYVGDLHPD+T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK +R+MWS RDP+ RKSG GN+F+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGYGFV FE++E+A  AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   D+ +  L++ F  FG  +S+ +  D++G SKGF FV+++  +DA+KA++ MNG +   K +YV RAQKK ER+  L  +FE+ ++++I + +G NLYVKN+DD + ++ LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+R+  L   Y  + A +   P  VI P
Sbjct:    3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINP 399          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP1_BOVIN (Polyadenylate-binding protein 1 OS=Bos taurus OX=9913 GN=PABPC1 PE=2 SV=1)

HSP 1 Score: 386.726 bits (992), Expect = 6.663e-127
Identity = 190/399 (47.62%), Postives = 268/399 (67.17%), Query Frame = 1
Query:   10 PATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDR--ILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP 1200
            P+  +   +SLYVGDLHPD+T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK +R+MWS RDP+ RKSG GN+F+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGYGFV FE++E+A  AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   D+ +  L++ F  FG  +S+ +  D++G SKGF FV+++  +DA+KA++ MNG +   K +YV RAQKK ER+  L  +FE+ ++++I + +G NLYVKN+DD + ++ LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+R+  L   Y  + A +   P  VI P
Sbjct:    3 PSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINP 399          
BLAST of Vigun07g064100.1 vs. DB:Swiss
Match: PABP1_PONAB (Polyadenylate-binding protein 1 OS=Pongo abelii OX=9601 GN=PABPC1 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 2.947e-126
Identity = 190/399 (47.62%), Postives = 267/399 (66.92%), Query Frame = 1
Query:   10 PATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTRASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRGNVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESEESANSAIEKLNGSTVRDKQIYVGKFVRKGDR--ILPGYDSKYTNLYIKNLDSDITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMETMNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKNIDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKAMSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP 1200
            P+  +   +SLYVGDLHPD T+  L++ F     + S+RVCRD +TR SL Y YVNF    DA RA+   N   + GK +R+MWS RDP+ RKSG GN+F+KNL +SIDN  L+D F  +GN+LS KVV  ++G SKGYGFV FE++E+A  AIEK+NG  + D++++VG+F  + +R   L     ++TN+YIKN   D+ +  L++ F  FG  +S+ +  D++G SKGF FV+++  +DA+KA++ MNG +   K +YV RAQKK ER+  L  +FE+ ++++I + +G NLYVKN+DD + ++ LR  FS  GTITS KVM  E G SKGFGFVCFS+PEEA KA++   G +   KPLY+A AQRKE+R+  L   Y  + A +   P  VI P
Sbjct:    3 PSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQYMQRMASVRAVPNPVINP 399          
The following BLAST results are available for this feature:
BLAST of Vigun07g064100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PABP7_ARATH0.000e+058.93Polyadenylate-binding protein 7 OS=Arabidopsis tha... [more]
PABP2_ARATH6.503e-13651.93Polyadenylate-binding protein 2 OS=Arabidopsis tha... [more]
PABP8_ARATH4.723e-13048.46Polyadenylate-binding protein 8 OS=Arabidopsis tha... [more]
PABP4_HUMAN6.959e-12848.89Polyadenylate-binding protein 4 OS=Homo sapiens OX... [more]
PABP1_MOUSE1.751e-12747.87Polyadenylate-binding protein 1 OS=Mus musculus OX... [more]
PABP1_RAT1.888e-12747.87Polyadenylate-binding protein 1 OS=Rattus norvegic... [more]
EPAB_XENTR6.540e-12746.03Embryonic polyadenylate-binding protein OS=Xenopus... [more]
PABP1_HUMAN6.663e-12747.62Polyadenylate-binding protein 1 OS=Homo sapiens OX... [more]
PABP1_BOVIN6.663e-12747.62Polyadenylate-binding protein 1 OS=Bos taurus OX=9... [more]
PABP1_PONAB2.947e-12647.62Polyadenylate-binding protein 1 OS=Pongo abelii OX... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 263..283
NoneNo IPR availableCDDcd12379RRM2_I_PABPscoord: 98..174
e-value: 1.98759E-37
score: 129.979
NoneNo IPR availableCDDcd12381RRM4_I_PABPscoord: 293..371
e-value: 8.45866E-43
score: 144.684
NoneNo IPR availableCDDcd12378RRM1_I_PABPscoord: 13..92
e-value: 7.19333E-34
score: 120.717
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 295..367
e-value: 4.9
score: 7.1
coord: 192..264
e-value: 0.39
score: 18.3
coord: 101..173
e-value: 0.34
score: 19.0
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 13..86
e-value: 1.4E-19
score: 81.1
coord: 192..264
e-value: 1.3E-25
score: 101.1
coord: 101..173
e-value: 2.4E-24
score: 96.9
coord: 295..367
e-value: 7.4E-25
score: 98.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 102..170
e-value: 5.3E-21
score: 74.2
coord: 14..84
e-value: 6.4E-16
score: 57.9
coord: 296..364
e-value: 3.8E-17
score: 61.9
coord: 193..261
e-value: 9.6E-22
score: 76.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 191..268
score: 19.945
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 12..90
score: 14.829
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 100..177
score: 18.189
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 294..371
score: 18.427
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 275..380
e-value: 2.2E-27
score: 97.9
coord: 4..98
e-value: 9.8E-21
score: 76.3
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 184..274
e-value: 2.8E-26
score: 94.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 101..173
e-value: 3.6E-22
score: 80.3
IPR006515Polyadenylate binding protein, human types 1, 2, 3, 4TIGRFAMTIGR01628TIGR01628coord: 12..390
e-value: 1.8E-174
score: 580.2
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 101..271
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 11..99
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 289..382

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun07g064100.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g064100.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g064100.1; organism=Vigna unguiculata; type=mRNA; length=1989bp
AAGATCCTCACACTCACTGGTCACACAGTCGCACCACCTCCTTTCTCTCT
CTGCGTGCACTCTCAGTCTCTCATCAAGATTCTCATAGAAAACGCCGTCG
TTCGAGGAAGGGTTTTAGTCACCACCTTTTCAGTCTTCCATTCTTTACCG
CTCTCTATTCTCCGATCCAACAATGGCCGTTCCAGCTACGGTTGCCGCTG
CTCAGTCTTCGCTTTACGTTGGAGATCTTCATCCTGACATCACCGACACC
CAACTATTCCAGGCCTTCCGTGAATTCGAAAGCCTCTCTTCCGTCCGCGT
CTGCAGGGATTCCATGACGAGGGCGTCGCTCCGTTACGGTTACGTCAACT
TTATGTCTCAGCAAGACGCAAACCGAGCTATTAAAGTGAAAAATAATTCT
TATCTCTTTGGAAAAGTGATAAGGGTCATGTGGTCACATCGCGATCCTAA
TGGAAGGAAAAGTGGCAGAGGGAATGTGTTTGTTAAGAACTTGGCAGAAT
CAATAGATAATGCGGTGCTACATGATTTATTTCAAAAATATGGAAATGTT
TTGTCCAGCAAAGTAGTCGTGTATGACGATGGGAAGAGCAAAGGGTATGG
CTTTGTTCAATTTGAATCGGAGGAATCTGCAAATAGTGCCATTGAGAAGT
TGAATGGCTCTACCGTGAGAGACAAACAGATATATGTTGGGAAGTTTGTC
AGAAAAGGTGACCGCATTTTGCCCGGTTATGATTCCAAGTATACAAATTT
GTACATTAAAAACTTGGATTCGGATATTACGGAAGCACTTCTTCGGGAAA
AGTTCTCCACTTTTGGAAAAATTATTAGTTTGGCTATCGCAAAGGACGAC
AATGGGCTATCCAAGGGTTTTGCATTTGTTAACTATGATAGTCCAGATGA
TGCTAGAAAGGCGATGGAAACAATGAATGGATCGCAATTTGGTTCAAAGA
ATCTTTATGTGTCTAGGGCGCAGAAGAAGGCTGAACGTGAGCAACTCTTG
CATAATCAATTTGAGGAAAAACGCAAGGAGCAAATACAGAAATCAAAGGG
CTCCAACCTTTATGTGAAGAACATTGATGACGCTGTTGGTGAAAAAGAAC
TACGAGATCTGTTTAGTTCATGTGGCACAATCACTTCTGTAAAAGTTATG
CGAAATGAAAAAGGGATAAGCAAGGGGTTTGGTTTTGTCTGCTTCTCCAA
CCCTGAGGAGGCTATTAAAGCTATGAGCACTTTTTATGGATGCATGTTCT
ATGGTAAGCCACTGTATATTGCTTTCGCGCAGAGGAAGGAGGATAGGAAA
ACACAGCTGAAGCTCCACTATGCACCCCAACAAGCACGATTGAATGGATC
TCCTGCTACAGTTATCCCTCCTGGCTTTACACCTTACTTTTATCCAAATG
TTACTTCACATGTGTTTCAATCTGGGCTTTTGTATCAACCTCTGGGATTG
GGATCAGGATGGAGGGCTAATGACTTTACGCCTCCTACTAGACCATTTCA
ACCATCACAGGTTCCTATTGTTCCTAGCACTAATAGGAATCGTAGGCTAA
ATAGGGGCATGATGAATGGGCATATGAATTCAATGGGAAAAGCTCAAACT
GGTGTATATATCCCGCAACTGCAGCACTATTATCAGCCATTGGACTCAAG
AGAGTACATGGCAGCTTAGCTGCGAAGATTCCAGGAATGCTTATGGAGAG
ACACTTCCTCCAAAAGTGACGTGTTGTTGTGCTCTGTTGACGATTTCAAC
CTTGAGATGATACCAGTTTTGGAGCTTAGATCATGACATGGTAGAAGCTT
CCAATAACTGAGATATCTGATAAATGAGAATAAACGGAATGGGAACAACT
CTTCTTTCTTTGTCATAGTATTGATACTGAATAATTGATGGTATCTTTCG
GGGTAAACTTTGTTTGAATTTTGATTACATGGATAATCTTGGATTCTTGT
ATGAATTTTCATCTTTTTCGTTAAGAAATGTCTTTCACC
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protein sequence of Vigun07g064100.1_Vu_IT97K-499-35_v1.1

>Vigun07g064100.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g064100.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g064100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=499bp
MAVPATVAAAQSSLYVGDLHPDITDTQLFQAFREFESLSSVRVCRDSMTR
ASLRYGYVNFMSQQDANRAIKVKNNSYLFGKVIRVMWSHRDPNGRKSGRG
NVFVKNLAESIDNAVLHDLFQKYGNVLSSKVVVYDDGKSKGYGFVQFESE
ESANSAIEKLNGSTVRDKQIYVGKFVRKGDRILPGYDSKYTNLYIKNLDS
DITEALLREKFSTFGKIISLAIAKDDNGLSKGFAFVNYDSPDDARKAMET
MNGSQFGSKNLYVSRAQKKAEREQLLHNQFEEKRKEQIQKSKGSNLYVKN
IDDAVGEKELRDLFSSCGTITSVKVMRNEKGISKGFGFVCFSNPEEAIKA
MSTFYGCMFYGKPLYIAFAQRKEDRKTQLKLHYAPQQARLNGSPATVIPP
GFTPYFYPNVTSHVFQSGLLYQPLGLGSGWRANDFTPPTRPFQPSQVPIV
PSTNRNRRLNRGMMNGHMNSMGKAQTGVYIPQLQHYYQPLDSREYMAA*
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mRNA from alignment at Vu07:7428798..7433140+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun07g064100.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g064100.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g064100.1; organism=Vigna unguiculata; type=mRNA; length=4343bp; location=Sequence derived from: Vu07:7428798..7433140+ (Vigna unguiculata
AAGATCCTCACACTCACTGGTCACACAGTCGCACCACCTCCTTTCTCTCT CTGCGTGCACTCTCAGTCTCTCATCAAGATTCTCATAGAAAACGCCGTCG TTCGAGGAAGGGTTTTAGTCACCACCTTTTCAGTCTTCCATTCTTTACCG CTCTCTATTCTCCGATCCAACAATGGCCGTTCCAGCTACGGTTGCCGCTG CTCAGTCTTCGCTTTACGTTGGAGATCTTCATCCTGACATCACCGACACC CAACTATTCCAGGCCTTCCGTGAATTCGAAAGCCTCTCTTCCGTCCGCGT CTGCAGGGATTCCATGACGAGGGCGTCGCTCCGTTACGGTTACGTCAACT TTATGTCTCAGCAAGACGGTATCACTCGCTCTCTCTATATGAGATATTCA TATACAGTAACATTCACGATTAACAATTGCTTTGATGCATTGCATGGCTG CGTTTTCTTTATCTTTATCGTTTCTTTGATTGTTCTTGTTCGTCTTTGTG TATTGAGAGAGTTTTTTTTTTTTTTTTTTCTTTTTTAAATTTATCTTTAC ACTAACCTGTCTTTGGTAGTGTGAATTGGTGTTTTGTTTTAGGTCTTCAA GAGAGATCTTGGAAATTGCTAGTTACATGGATTTTTATTTATCGATGCCG ATAAGTGGTAAAGGAATGATGTGCAAATATTGCTAGTTCGAATTAATGTT TTGTTGGCTAGGGTATTTAATTTCTTGGCACGTATTTTGATGTTTGAGAT TTGGCCTTCAGAGGGTATGTTGATACTATTGTTGTTTTTGTAAAGAAACG CTAATCTTCGAAGAGTCTTGCATGTTTATCGTGTGGGAATGAAGGTAAAA ACTATTTTTTTCATAAAATGGTCTGCAATGCAATTTTAGTCGTAGCGTCT AGGTTCTTGGGCTATCAGTGGCTGCATAGCAACTACAATTGAGGTTATTT GTCCGCAATTTCTTGCAATGTCGATGATTGAAGTGAAACTAGCTTTTTGC GGTTTTATTTTTATATATGTCGGGAAAATTTGCCTAGAATCCGGACAATA CACACTAGACTAAGATTTGATAAAGTGCTTTTGCTTAAACTTTTCTGACC GAATTGTGTTAGTGTGTGGCTTGAAATTTGTAGTTGTAATTTTTTCATTA ACTGCAAGATTTTCTCTTTGAAAAAAGATGGAGACTATTAATTGCTATCT TAGACTATCTTTAAGACAAGGTGCTTACTAACTCAATTTCCTAAATTAGA TTGTTCACGAAGAAGCAAGAGCTTACTTCAATTTCATTTTTTTTAGTTCT ACTTGTACTTTCTGAAGAGAGTAAAGAATATGCTTTCTTGGATTATTGTT GCTCTTAGAATGTTTACACCTGTTGATGTAGTCTGATTCGATTAACCTTG GTATGCTTATTGTGTAGCAAACCGAGCTATTAAAGTGAAAAATAATTCTT ATCTCTTTGGAAAAGTGATAAGGGTCATGTGGTCACATCGCGATCCTAAT GGAAGGAAAAGTGGCAGAGGGAATGTGTTTGTTAAGGTATATCTACAGCT TTGTATGAATAGTTAAATCATTTCTGGTTCGTTATTGCTTAAAGTGAATT CTAATGGAAAATTTCTGGTGTTCAATACCATGGCAGAACTTGGCAGAATC AATAGATAATGCGGTGCTACATGATTTATTTCAAAAATATGGAAATGTTT TGTCCAGCAAAGTAGTCGTGTATGACGATGGGAAGAGCAAAGGGTATGGC TTTGTTCAATTTGAATCGGAGGAATCTGCAAATAGTGCCATTGAGAAGTT GAATGGCTCTACCGTGAGAGACAAACAGATGTATGTAAAGCTCTTCATTA TTTCAGGACAAACGCTAGTTAAGGAATCAAAAGTGGAAGTTTTACTAAAA CTTGTTATTGATGCACCACGCTGTGATTTCCAACTTATTTGTCGATAACT TTTTTCTGATCGATTCCTTAACTAGTGTCAAGACCGTAAAGTTTTGAGCC TTTATTTAATTACTTTATCCACTTTCTATACACATATTTGTCTAAGGTAA ATATTAATCTGACTCTAATTTTCTAATAGATATGTTGGGAAGTTTGTCAG AAAAGGTGACCGCATTTTGCCCGGTTATGATTCCAAGTATACAAATTTGT ACATTAAAAACTTGGATTCGGATATTACGGAAGCACTTCTTCGGGAAAAG TTCTCCACTTTTGGAAAAATTATTAGTTTGGCTATCGCAAAGGACGACAA TGGGCTATCCAAGGGTTTTGCATTTGTTAACTATGATAGTCCAGATGATG CTAGAAAGGCGATGGAAACAATGAATGGATCGCAATTTGGTAGTGTATTT ATCTTTTAATGTACAGGTGGTGTTTATTCACAAAATTACCTTTTTTGATA TTGATTCATATCTGCCTTTTGATTTGTCATATGTAGGTTCAAAGAATCTT TATGTGTCTAGGGCGCAGAAGAAGGCTGAACGTGAGCAACTCTTGCATAA TCAATTTGAGGAAAAACGCAAGGAGCAAATACAGAAATCAAAGGTAATTC CATGCCCTTTCTCTTACGTTTAACTTGTGAATTCCTTTTTCTTCTGACAA TGTCTTCATTTAACTTCCAGGGCTCCAACCTTTATGTGAAGAACATTGAT GACGCTGTTGGTGAAAAAGAACTACGAGATCTGTTTAGTTCATGTGGCAC AATCACTTCTGTAAAAGTTATGCGAAATGAAAAAGGGATAAGCAAGGGGT TTGGTTTTGTCTGCTTCTCCAACCCTGAGGAGGCTATTAAAGCTATGAGC ACTTTTTATGGTGAGTTTTGCCGATGTAATATTGTAGTGTCATGGGATTG AATGCGACCATGTTCTGTTTTTAGCTAGATTTGTATTAATACTATGAAAC AGGGGACAAGTGCTTGCTATAACATTTCAATAATAGAACACAAAACTTAT ATGTTACATTTATAGGATTACAAACTTTTTTTCTTAGTCTTGGGGATTGA AAGATCAGATATAATTTATATGTCGTTTTTAATTTTTAATACCAAATTCT AATTAAAGTTATGATCTTGAGAATTTACATCCATGTTACTTCAATGAATT TGAACACTTATTCCATCCAGGACCACTATGTTGTTTATGGTGTAAACACT GATTTTATCTCGTTGTTTATGCTCTTATTTACAATGCTGCTACATGCCGC AGGATGCATGTTCTATGGTAAGCCACTGTATATTGCTTTCGCGCAGAGGA AGGAGGATAGGAAAACACAGCTGAAGCTCCACTATGCACCCCAACAAGCA CGATTGAATGGATCTCCTGCTACAGTTATCCCTCCTGGCTTTACACCTTA CTTTTATCCAAATGTTACTTCACATGTGTTTCAATCTGGGCTTTTGTATC AACCTCTGGGATTGGGATCAGGATGGAGGGCTAATGACTTTACGCCTCCT ACTAGACCATTTCAACCATCACAGGTTCCTATTGTGAGTATCGAATTTAC AGAACAACTTTAAAATAATTAATGTTTTTTGACCATTTAATATTATTTTG GGAATAATATTTACTAGGAAAAAAATAAGTAGCTATATCATTACAGCGTA TCTCTAACTTTTATTCCTTTATGCAAATCATTTGTCAAACTAATATTTAA TTGTACTAAATCCTCCCCGGGGAAATGTAAATACGTCATTAGGACAAGCA AATCTGATTTGATGAAAGCTTGAATGAGTCTTAGACATGAAATTTATATT TCATTTCTCTTATTTTCAGGTTCCTAGCACTAATAGGAATCGTAGGCTAA ATAGGGGCATGATGAATGGGCATATGAATTCAATGGGAAAAGCTCAAACT GGTGTATATATCCCGCAACTGCAGCACTATTATCAGCCATTGGACTCAAG AGAGTACATGGCAGGTTTGCTTCTTTTTCTTCACCCATTTCTTCAGAAAC TTTATTTTTAGCATTTGTAGTTACGTTTTTGAATTTTTAACTGCAATGAT TTATGTTATCTTGCACAGCTTAGCTGCGAAGATTCCAGGAATGCTTATGG AGAGACACTTCCTCCAAAAGTGACGTGTTGTTGTGCTCTGTTGACGATTT CAACCTTGAGATGATACCAGTTTTGGAGCTTAGATCATGACATGGTAGAA GCTTCCAATAACTGAGATATCTGATAAATGAGAATAAACGGAATGGGAAC AACTCTTCTTTCTTTGTCATAGTATTGATACTGAATAATTGATGGTATCT TTCGGGGTAAACTTTGTTTGAATTTTGATTACATGGATAATCTTGGATTC TTGTATGAATTTTCATCTTTTTCGTTAAGAAATGTCTTTCACC
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Coding sequence (CDS) from alignment at Vu07:7428798..7433140+

>Vigun07g064100.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g064100.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g064100.1; organism=Vigna unguiculata; type=CDS; length=1497bp; location=Sequence derived from: Vu07:7428798..7433140+ (Vigna unguiculata
ATGGCCGTTCCAGCTACGGTTGCCGCTGCTCAGTCTTCGCTTTACGTTGG
AGATCTTCATCCTGACATCACCGACACCCAACTATTCCAGGCCTTCCGTG
AATTCGAAAGCCTCTCTTCCGTCCGCGTCTGCAGGGATTCCATGACGAGG
GCGTCGCTCCGTTACGGTTACGTCAACTTTATGTCTCAGCAAGACGCAAA
CCGAGCTATTAAAGTGAAAAATAATTCTTATCTCTTTGGAAAAGTGATAA
GGGTCATGTGGTCACATCGCGATCCTAATGGAAGGAAAAGTGGCAGAGGG
AATGTGTTTGTTAAGAACTTGGCAGAATCAATAGATAATGCGGTGCTACA
TGATTTATTTCAAAAATATGGAAATGTTTTGTCCAGCAAAGTAGTCGTGT
ATGACGATGGGAAGAGCAAAGGGTATGGCTTTGTTCAATTTGAATCGGAG
GAATCTGCAAATAGTGCCATTGAGAAGTTGAATGGCTCTACCGTGAGAGA
CAAACAGATATATGTTGGGAAGTTTGTCAGAAAAGGTGACCGCATTTTGC
CCGGTTATGATTCCAAGTATACAAATTTGTACATTAAAAACTTGGATTCG
GATATTACGGAAGCACTTCTTCGGGAAAAGTTCTCCACTTTTGGAAAAAT
TATTAGTTTGGCTATCGCAAAGGACGACAATGGGCTATCCAAGGGTTTTG
CATTTGTTAACTATGATAGTCCAGATGATGCTAGAAAGGCGATGGAAACA
ATGAATGGATCGCAATTTGGTTCAAAGAATCTTTATGTGTCTAGGGCGCA
GAAGAAGGCTGAACGTGAGCAACTCTTGCATAATCAATTTGAGGAAAAAC
GCAAGGAGCAAATACAGAAATCAAAGGGCTCCAACCTTTATGTGAAGAAC
ATTGATGACGCTGTTGGTGAAAAAGAACTACGAGATCTGTTTAGTTCATG
TGGCACAATCACTTCTGTAAAAGTTATGCGAAATGAAAAAGGGATAAGCA
AGGGGTTTGGTTTTGTCTGCTTCTCCAACCCTGAGGAGGCTATTAAAGCT
ATGAGCACTTTTTATGGATGCATGTTCTATGGTAAGCCACTGTATATTGC
TTTCGCGCAGAGGAAGGAGGATAGGAAAACACAGCTGAAGCTCCACTATG
CACCCCAACAAGCACGATTGAATGGATCTCCTGCTACAGTTATCCCTCCT
GGCTTTACACCTTACTTTTATCCAAATGTTACTTCACATGTGTTTCAATC
TGGGCTTTTGTATCAACCTCTGGGATTGGGATCAGGATGGAGGGCTAATG
ACTTTACGCCTCCTACTAGACCATTTCAACCATCACAGGTTCCTATTGTT
CCTAGCACTAATAGGAATCGTAGGCTAAATAGGGGCATGATGAATGGGCA
TATGAATTCAATGGGAAAAGCTCAAACTGGTGTATATATCCCGCAACTGC
AGCACTATTATCAGCCATTGGACTCAAGAGAGTACATGGCAGCTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR006515PABP_1234
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding