Vigun07g214400.1

Transcript Overview
NameVigun07g214400.1
Unique NameVigun07g214400.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length905
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu07supercontigVu07:33566109..33567013 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL312Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL190Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL558Pisum sativum Cameor genome v1aPisum sativum
crvuL397Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL731Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL465Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL626Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL300Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0403Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0418Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0692Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0832Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1066Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1126Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1131Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL267Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL273Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL369Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR482Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR507Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR558Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL208Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL181Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL396Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL367Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL182Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL133Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL139Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL621Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vuvuaR356Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR371Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL266Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL030Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL313Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL136Cicer arietinum
carvuL284Cicer arietinum
carvuL654Cicer arietinum
ccavuL222Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL606Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR583Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR609Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR587Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR616Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL169Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL594Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL184Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL187Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL599Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL393Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL551Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR413Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR423Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat6g191360.1Pisum sativum Cameor genome v1aPisum sativum
Ca_10208.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_004496390.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_04369Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_11G00934.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.1g111480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
XM_058913911.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vigst.08G073300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vigst.11G073300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr07.723Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-TanjilR_13584Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg45650.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_06156Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.11G140400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_014656427.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan10g139500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Psat06G0516000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cc_v2.0_18286.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Phvul.007G082100.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_08G00757.1Vigna umbellata FF25 genome v1.0Vigna umbellata
XM_058920422.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va02G062740.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Va10G028530.5Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.3g127480.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr04.1258Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg41368.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g102680.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_027641Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_04612.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cr_08075.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cr_04547.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan02g201000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_02040Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.08G092900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
PvulFLAVERTChr07.1000528Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr04.545Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Tiffany.R1.1g082200.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun04g128200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun04g128200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun07g214400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun07g214400Vigun07g214400_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g214400.1Vigun07g214400.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun07g214400.1_Vu_IT97K-499-35_v1.1Vigun07g214400.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g214400.1.v1.1.five_prime_UTR.1Vigun07g214400.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g214400.1.v1.1.CDS.1Vigun07g214400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun07g214400.1.v1.1.three_prime_UTR.1Vigun07g214400.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Vigun07g214400.1 vs.
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40coord: 28..175
e-value: 1.5E-10
score: 43.1
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 33..173
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 33..168
e-value: 1.9E-8
score: 34.8
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 9..173
e-value: 6.7E-13
score: 46.3
IPR034088Pla a 1-likeCDDcd15795PMEI-Pla_a_1_likecoord: 52..169
e-value: 7.89529E-22
score: 84.339

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun07g214400.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g214400.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g214400.1; organism=Vigna unguiculata; type=mRNA; length=905bp
TTCAACCAAAAGATAAACATTATATCATTTATAGGACAAATTTGTTATAT
GTTTTTCTTTTTTAAACTTAATTAAGCATGGTAGCGAGTGGTTGTAGATT
CCAAAAAAACCGTAGCGTTAATCTAAATTAGGATTTGAGAGACTATAAAG
ATCCGAAGACGATGAACAAAGAACTCACTCCCCCACACCAAACCCTAAGG
GACCAATAAATAAAGCAACCCCATCACAAAATGAGTTCCTCAACACTACG
TTGCCTTGTTGTGGCGCTGTGTGTGGTGGTGCTTTTGTATTGTCCCATGG
CAGCAAATGGCGAACAAGGGTTGGCGGAACAAATCTGCATGGAAAGCTTC
GAAGACAAGGAAGGGTGCATGGCGCTGGTAAAGCAAGCCGATCCTAAGAT
CGCGAGTGCAAGAAGCTTGGAAGATCTAGCTCAGGCAACCCTAGAATGGG
CCGTGAGCAAGTCATCGGAGGCTCAAGCGTTCCTGAAGGAGTTGGCTAAG
ATGGAGAATAATCCAGCCATAGTGCAATGCGCGAATTTCGACTACGATGG
TGTGGTTGGATCCTTCAAGAGCGCCTTACAAGAGTTGAAAGAAGATCCTC
AAACCGCTAGCTATGATGCGAAAGCTGCTGGTGATGGACCTGATTGTTGT
GACAGAGGCTTGGCTTCTGCAAATATTAACAACCCTGCTGTTACCGCTCT
TAACCGCCAAATTTTCCTCCTCAGCAACATGGCCTTCACCGCCGTCAGTA
AATACAGTGATTAATTCAATTCGCCACCTCAACTTGTCATCGATGCTTAT
CCTTAAGTGTGGGGTGTTGCTATATACTTTTCGGTCTTCTTTGGTGTGGG
GGAGTGCAACTCATTAATAAAAGAGAATTTCTTTCCTCCACTCAATTTTG
CTTCT
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protein sequence of Vigun07g214400.1_Vu_IT97K-499-35_v1.1

>Vigun07g214400.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g214400.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g214400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=178bp
MSSSTLRCLVVALCVVVLLYCPMAANGEQGLAEQICMESFEDKEGCMALV
KQADPKIASARSLEDLAQATLEWAVSKSSEAQAFLKELAKMENNPAIVQC
ANFDYDGVVGSFKSALQELKEDPQTASYDAKAAGDGPDCCDRGLASANIN
NPAVTALNRQIFLLSNMAFTAVSKYSD*
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mRNA from alignment at Vu07:33566109..33567013+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun07g214400.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g214400.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g214400.1; organism=Vigna unguiculata; type=mRNA; length=905bp; location=Sequence derived from: Vu07:33566109..33567013+ (Vigna unguiculata
TTCAACCAAAAGATAAACATTATATCATTTATAGGACAAATTTGTTATAT
GTTTTTCTTTTTTAAACTTAATTAAGCATGGTAGCGAGTGGTTGTAGATT
CCAAAAAAACCGTAGCGTTAATCTAAATTAGGATTTGAGAGACTATAAAG
ATCCGAAGACGATGAACAAAGAACTCACTCCCCCACACCAAACCCTAAGG
GACCAATAAATAAAGCAACCCCATCACAAAATGAGTTCCTCAACACTACG
TTGCCTTGTTGTGGCGCTGTGTGTGGTGGTGCTTTTGTATTGTCCCATGG
CAGCAAATGGCGAACAAGGGTTGGCGGAACAAATCTGCATGGAAAGCTTC
GAAGACAAGGAAGGGTGCATGGCGCTGGTAAAGCAAGCCGATCCTAAGAT
CGCGAGTGCAAGAAGCTTGGAAGATCTAGCTCAGGCAACCCTAGAATGGG
CCGTGAGCAAGTCATCGGAGGCTCAAGCGTTCCTGAAGGAGTTGGCTAAG
ATGGAGAATAATCCAGCCATAGTGCAATGCGCGAATTTCGACTACGATGG
TGTGGTTGGATCCTTCAAGAGCGCCTTACAAGAGTTGAAAGAAGATCCTC
AAACCGCTAGCTATGATGCGAAAGCTGCTGGTGATGGACCTGATTGTTGT
GACAGAGGCTTGGCTTCTGCAAATATTAACAACCCTGCTGTTACCGCTCT
TAACCGCCAAATTTTCCTCCTCAGCAACATGGCCTTCACCGCCGTCAGTA
AATACAGTGATTAATTCAATTCGCCACCTCAACTTGTCATCGATGCTTAT
CCTTAAGTGTGGGGTGTTGCTATATACTTTTCGGTCTTCTTTGGTGTGGG
GGAGTGCAACTCATTAATAAAAGAGAATTTCTTTCCTCCACTCAATTTTG
CTTCT
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Coding sequence (CDS) from alignment at Vu07:33566109..33567013+

>Vigun07g214400.1_Vu_IT97K-499-35_v1.1 ID=Vigun07g214400.1_Vu_IT97K-499-35_v1.1; Name=Vigun07g214400.1; organism=Vigna unguiculata; type=CDS; length=534bp; location=Sequence derived from: Vu07:33566109..33567013+ (Vigna unguiculata
ATGAGTTCCTCAACACTACGTTGCCTTGTTGTGGCGCTGTGTGTGGTGGT
GCTTTTGTATTGTCCCATGGCAGCAAATGGCGAACAAGGGTTGGCGGAAC
AAATCTGCATGGAAAGCTTCGAAGACAAGGAAGGGTGCATGGCGCTGGTA
AAGCAAGCCGATCCTAAGATCGCGAGTGCAAGAAGCTTGGAAGATCTAGC
TCAGGCAACCCTAGAATGGGCCGTGAGCAAGTCATCGGAGGCTCAAGCGT
TCCTGAAGGAGTTGGCTAAGATGGAGAATAATCCAGCCATAGTGCAATGC
GCGAATTTCGACTACGATGGTGTGGTTGGATCCTTCAAGAGCGCCTTACA
AGAGTTGAAAGAAGATCCTCAAACCGCTAGCTATGATGCGAAAGCTGCTG
GTGATGGACCTGATTGTTGTGACAGAGGCTTGGCTTCTGCAAATATTAAC
AACCCTGCTGTTACCGCTCTTAACCGCCAAATTTTCCTCCTCAGCAACAT
GGCCTTCACCGCCGTCAGTAAATACAGTGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR035513Invertase/methylesterase_inhib
IPR006501Pectinesterase_inhib_dom
IPR034088Pla_a_1-like
Vocabulary: Molecular Function
TermDefinition
GO:0004857enzyme inhibitor activity