Vigun08g012200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PS10A_ARATH (26S proteasome regulatory subunit 10B homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT4A PE=1 SV=1) HSP 1 Score: 763.066 bits (1969), Expect = 0.000e+0 Identity = 373/399 (93.48%), Postives = 388/399 (97.24%), Query Frame = 1 Query: 1 MTDTEDSTRRRNA-VTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYSADFGKE 1194 MTD ++S RRR A V+EYRKKLLQHKELESRVR+ RENLR ++KEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLT+GTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAEGFNGADLRN+CTEAGM AIRAERDYVIHEDFMKAVRKL++AKKLESS+ Y+ADFGKE Sbjct: 1 MTDVDESVRRRTAAVSEYRKKLLQHKELESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PS10B_ARATH (26S proteasome regulatory subunit S10B homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT4B PE=1 SV=1) HSP 1 Score: 760.755 bits (1963), Expect = 0.000e+0 Identity = 372/399 (93.23%), Postives = 388/399 (97.24%), Query Frame = 1 Query: 1 MTDTEDSTRRRNA-VTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYSADFGKE 1194 M+D +D+ RRR A VT+YRKKLL HKELESRVR+ RENLRA++KEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLT+GTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGL DQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF YAR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL EGFNGADLRN+CTEAGM AIRAERDYVIHEDFMKAVRKL++AKKLESS+ Y+ADFGKE Sbjct: 1 MSDGDDAARRRTAAVTDYRKKLLHHKELESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGEGFNGADLRNICTEAGMFAIRAERDYVIHEDFMKAVRKLSEAKKLESSSHYNADFGKE 399
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_MOUSE (26S proteasome regulatory subunit 10B OS=Mus musculus OX=10090 GN=Psmc6 PE=1 SV=1) HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0 Identity = 295/382 (77.23%), Postives = 337/382 (88.22%), Query Frame = 1 Query: 28 RRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPY 1173 R A+ +YRKKLL+HKE++ R++ +RE L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGN+SYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ D+KKLES Y Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_ICTTR (26S proteasome regulatory subunit 10B OS=Ictidomys tridecemlineatus OX=43179 GN=PSMC6 PE=2 SV=1) HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0 Identity = 295/382 (77.23%), Postives = 337/382 (88.22%), Query Frame = 1 Query: 28 RRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPY 1173 R A+ +YRKKLL+HKE++ R++ +RE L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGN+SYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ D+KKLES Y Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_HUMAN (26S proteasome regulatory subunit 10B OS=Homo sapiens OX=9606 GN=PSMC6 PE=1 SV=1) HSP 1 Score: 622.083 bits (1603), Expect = 0.000e+0 Identity = 295/382 (77.23%), Postives = 337/382 (88.22%), Query Frame = 1 Query: 28 RRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPY 1173 R A+ +YRKKLL+HKE++ R++ +RE L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGN+SYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGADLRNVCTEAGM AIRA+ D+V+ EDFMKAVRK+ D+KKLES Y Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_BOVIN (26S proteasome regulatory subunit 10B OS=Bos taurus OX=9913 GN=PSMC6 PE=2 SV=1) HSP 1 Score: 619.002 bits (1595), Expect = 0.000e+0 Identity = 294/382 (76.96%), Postives = 336/382 (87.96%), Query Frame = 1 Query: 28 RRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPY 1173 R A+ +YRKKLL+HKE++ R++ +RE L+ K++ K+E+DLK+LQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++DK KL GTRV LDMTTLTIMR LPREVDP+VYNM HEDPGN+SYS +GGLS+QIRELRE IELPL NPELF RVGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF YARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNRPD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++GFNGADL NVCTEAGM AIRA+ D+V+ EDFMKAVRK+ D+KKLES Y Sbjct: 5 RDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGEVLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSDGFNGADLGNVCTEAGMFAIRADHDFVVQEDFMKAVRKVADSKKLESKLDY 386
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_CAEEL (Probable 26S proteasome regulatory subunit 10B OS=Caenorhabditis elegans OX=6239 GN=rpt-4 PE=1 SV=2) HSP 1 Score: 608.601 bits (1568), Expect = 0.000e+0 Identity = 288/382 (75.39%), Postives = 335/382 (87.70%), Query Frame = 1 Query: 28 RRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPY 1173 R A+ YR+KL + +++E +++ +R+ K+F+K+E+D+KSLQSVGQI+GEVL+ L E+ IVKA++GPRYVVGCR ++KE+L GTRV LDMTTLTIMR LPREVDP+VY M HEDPGNISYS VGGL++QIRELRE +ELPL+NPELF RVGI PPKG LL+GPPGTGKTLLARA+AS +D NFLKVVSSAI+DKYIGESAR+IREMF YARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVK+IMATNRPD LDPALLRPGRLDRKIEI LPNEQSR+EILKIH+ I KHGEID+EAVVKL++GF+ ADLRNVCTEAGM AIRAER++VI EDFMKAVRK+ DAK+LE+ Y Sbjct: 22 RTKALNSYRRKLAECRDIEQKLKDLRKKESEMTKQFDKSENDIKSLQSVGQIVGEVLKQLSEEKFIVKATNGPRYVVGCRRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVIDEDFMKAVRKVGDAKRLETKLDY 403
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_SCHPO (Probable 26S proteasome subunit rpt4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpt4 PE=3 SV=2) HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0 Identity = 283/385 (73.51%), Postives = 328/385 (85.19%), Query Frame = 1 Query: 22 TRRRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYS 1176 + R A+ +Y+ LLQH+E +S+++ +R R K+++KTEDD+KSLQSVGQIIGEVL+ LD+ER IVKASSGPRYVVGCR+ VD+ L G RV LDMTTLTIMR LPREVDP+VYNM EDPG+IS++ VGGL++QIRELRE IELPL NPELFLRVGIKPPKGVLLYGPPGTGKTLLARA+A+++ NFLKVVSSAI+DKYIGESAR+IREMFGYA++H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+ K+IMATNRPD LDPALLRPGRLDRKIEIPLPNE RMEILKIH ++K GEIDYEA+VKL +G NGADLRNV TEAG AI+ +RDYVI D M A RK+ D KKLE + Y Sbjct: 2 SERDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTDGTNGADLRNVVTEAGFIAIKEDRDYVIQSDLMSAARKVADLKKLEGTIDYQ 386
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_DICDI (26S proteasome regulatory subunit 10B OS=Dictyostelium discoideum OX=44689 GN=psmC6 PE=1 SV=1) HSP 1 Score: 573.548 bits (1477), Expect = 0.000e+0 Identity = 281/390 (72.05%), Postives = 329/390 (84.36%), Query Frame = 1 Query: 10 TEDSTRRRNAVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKL-TAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYS 1176 + + T++ A+ YR +L++HK E R+ E ++ +K+F KTED +K++Q +G+IIGEVLR LD ER IVKA +GPRYVV C + DK L G RV LD+TTLTI++ LPREVDP+++NM E PG++SY +GGLS+QIRELRE +ELPLM PELF+RVGIK PKGVLLYGPPGTGKTLLARAIASN++ANFLKVVSSAI+DKYIGESAR+IREMFGYARDHQPC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L KVK+IMATNRPDVLDPALLRPGRLDRKIEIPLPNE R+++LKIHAA I KHG++DYEA+ KLA+GFN ADLRNVCTEAGM AIRAERDYV+ EDFMKAVRK +AKKLE Y Sbjct: 2 STEETKKEQALQNYRDRLIEHKNAELRLNKAHELIKKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLADGFNAADLRNVCTEAGMFAIRAERDYVMEEDFMKAVRKCQEAKKLEGKLDYQ 391
BLAST of Vigun08g012200.1 vs. DB:Swiss
Match: PRS10_YEAST (26S proteasome subunit RPT4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPT4 PE=1 SV=4) HSP 1 Score: 538.88 bits (1387), Expect = 0.000e+0 Identity = 249/380 (65.53%), Postives = 313/380 (82.37%), Query Frame = 1 Query: 37 AVTEYRKKLLQHKELESRVRSVRENLRASRKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGMAAIRAERDYVIHEDFMKAVRKLNDAKKLESSAPYS 1176 A+ ++++KLL+H+ + +++ R+N+R K ++KTE+D+K+LQS+GQ+IGEV++ L E+ IVKASSGPRY+VG R+ VD+ KL G RV LD+TTLTIMR LPRE DP+VYNM + G I++ +GGL++QIRELRE IELPL NPE+F RVGIKPPKGVLLYGPPGTGKTLLA+A+A+ I ANF+ +S I+DKYIGESAR+IREMF YA++H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL Q+DGFD LG+ K+IMATNRPD LDPALLRPGRLDRK+EIPLPNE R+EI KIH A + K GE D+EA VK+++GFNGAD+RN TEAG AIR +RD++ +D MKAVRK+ + KKLE + Y Sbjct: 56 ALNQFKRKLLEHRRYDDQLKQRRQNIRDLEKLYDKTENDIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQ 435 The following BLAST results are available for this feature:
BLAST of Vigun08g012200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g012200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g012200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g012200.1; organism=Vigna unguiculata; type=mRNA; length=1746bpback to top protein sequence of Vigun08g012200.1_Vu_IT97K-499-35_v1.1 >Vigun08g012200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g012200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g012200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=399bpback to top mRNA from alignment at Vu08:1078659..1082095+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g012200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g012200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g012200.1; organism=Vigna unguiculata; type=mRNA; length=3437bp; location=Sequence derived from: Vu08:1078659..1082095+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:1078659..1082095+ >Vigun08g012200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g012200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g012200.1; organism=Vigna unguiculata; type=CDS; length=1197bp; location=Sequence derived from: Vu08:1078659..1082095+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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