Vigun08g016900.1

Transcript Overview
NameVigun08g016900.1
Unique NameVigun08g016900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2486
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:1424174..1426659 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL109Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL266Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuL057Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL424Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL734Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL380Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL925Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL783Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0480Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL553Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL643Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0787Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1205Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1302Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0115Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0318Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0919Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL070Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL073Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL129Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL198Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR581Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR625Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vfhvuL278Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL450Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL563Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL521Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL390Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL554Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL393Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR399Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL598Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL246Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL473Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL521Cicer arietinum
carvuL607Cicer arietinum
ccavuL160Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL432Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL549Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR642Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR657Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR698Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR692Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL073Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL227Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL480Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL080Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL242Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL496Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL169Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL339Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL689Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Va07G069700.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_24443Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_10826Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat06G0022100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
evm.model.Chr08.564Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
PvulFLAVERTChr01.115Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_10881.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014649936.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058869292.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_004499081.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_03G01974.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_08710.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
jg35197.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vfaba.Tiffany.R1.3g187040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_004883Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.001G015400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan01g334400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.03G179100.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cr_09352.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigan.03G279900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.3g229760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g016900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g016900Vigun08g016900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g016900.1Vigun08g016900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g016900.1_Vu_IT97K-499-35_v1.1Vigun08g016900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g016900.1.v1.1.five_prime_UTR.1Vigun08g016900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g016900.1.v1.1.CDS.1Vigun08g016900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g016900.1.v1.1.three_prime_UTR.1Vigun08g016900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
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BLAST of Vigun08g016900.1 vs. DB:Swiss
Match: Y1514_ARATH (Uncharacterized membrane protein At1g75140 OS=Arabidopsis thaliana OX=3702 GN=At1g75140 PE=1 SV=3)

HSP 1 Score: 617.461 bits (1591), Expect = 0.000e+0
Identity = 348/600 (58.00%), Postives = 429/600 (71.50%), Query Frame = 1 
Query:  178 QQVLLDKLEELVRNLSDLVARLESKLPDPPQEKGRLPHQRKXXXXXXXXTISSSKQDGEFEGKIRDGERAKGMSVTKYTPFWSERFQFASAVKLDSEVTCINVLPFRDHEGLSKYVAVSDERGRVYVFLRNGDVLVEFDTLVKSSITAMISYTSVYKNESFVVTGHENGEILLHRVWEGGSTGEDYSSLFMENVGKFVSPENREEGRPVTLLEVHYVGRMKYILSADTSGKIKVFKENGSLYGSVMASSRPLAFLKQRLMFLTETGAGSLDLRGMKIRESECEGLNHSVARTYVFDAMERSKAYGFTSDGEMIYVLLLGDVMNFKCRVRYKKKFDMDEPLALQAIKGYLLIVNPEKVFVYNVSSPHYVRVGVPRLVFSPSLDELRSSFL----NSPIPGLDAETKVIPLIGTDREKXXXXXXXXXXXXMYHSNLPIFKGEFNTMLWTSPVLFFVLFLFGAWHFFAKKKEALTSWGPDDPFTSTSATTNAPLASASADRSYGDSSSRSTEVMDLRGGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDHNARPASVDPDFR-GASELKYR-ATTMDPPGFPKRREGMFVPNQVVNERS 1959
            Q V L +LEELVRNL++LVARL++KL + P                    +       E E      E+AK  SVTKY+PFWSERF+F SAVKLDSE TCINVLPFRDHEGLSKY AV D  GRV+VFLRNGDVLVEF T   S ITAM+SY SVYKNESFVVTGH++G ILLHR+ E GS GED +S  MENVGKF   +  E+G  VTLLEVH+VGR++YIL+ D SGK+ VF EN ++YGSV  +SRPL FLKQRL+FLTETGAGSLDLR MKIRESECEGLNHS+AR+YVFDA ER+KAYGFTS+GE+I+VLLLGD+MNFKCRVR KKK  M+EP+ALQAIKGYLLIVN EKVFVYNVS+ HYVR   PRL+F  +L+++RS+FL    ++         KV PLI +DREKL+++GLG GYV  Y S LPI K EFNTMLW+SPV FF+LFLFGAWHFF+KKKE+LT+WGPDDPF+ST+ ++++   +A    ++ +S+ R+ + MDLR                       AA  +YR   S+D ++R      ++R  A E+KYR  + +D  GF KRRE +F  N+ +++ S
Sbjct:   58 QGVSLHRLEELVRNLTELVARLDAKLSETP------------------FKVKKEITRDEIE------EKAKAFSVTKYSPFWSERFEFTSAVKLDSEATCINVLPFRDHEGLSKYFAVGDSSGRVFVFLRNGDVLVEFFTTCDSPITAMVSYMSVYKNESFVVTGHQSGVILLHRLRE-GSIGEDLNSAVMENVGKF---DGTEDGLQVTLLEVHHVGRVRYILATDLSGKLTVFTENRTVYGSVSPTSRPLVFLKQRLLFLTETGAGSLDLRSMKIRESECEGLNHSLARSYVFDASERAKAYGFTSEGEIIHVLLLGDIMNFKCRVRSKKKVQMEEPVALQAIKGYLLIVNQEKVFVYNVSTQHYVRTTGPRLLFPAALEDIRSTFLSHRESTKTTDHQKLEKVTPLIASDREKLLVMGLGDGYVATYKSKLPISKAEFNTMLWSSPVFFFILFLFGAWHFFSKKKESLTAWGPDDPFSSTTMSSSS-TTTAQNSSAFSESTRRNDDHMDLR-----------RRYVSPSRYPPGAATGAYRSVGSNDPSSRAPVETTNYRTTAQEMKYRGGSGLDSGGFGKRRESLFGNNKALDDES 617
The following BLAST results are available for this feature:
BLAST of Vigun08g016900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
Y1514_ARATH0.000e+058.00Uncharacterized membrane protein At1g75140 OS=Arab... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 64..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..56
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 538..586
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 627..653
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 135..317
e-value: 3.1E-5
score: 25.2
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 152..297

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g016900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g016900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g016900.1; organism=Vigna unguiculata; type=mRNA; length=2486bp
GGATTATCTGATGCAGATATGGTCCAAACAAAGCTATATCTGACCAGATC
ATATATCCTCAGTTACAGAACATTTGAACTGATCTCAATTTAGTTTTTTG
TCTTGTTTTCTGTTACTTAATTCACATGTTAGCCCTAATTCAACCTCAGT
CAATACACTGTCCTGTATCTTACATGGATATCTGCTAAATTTCCTATTAC
CAGATCCATCAACTTCCAAGACACACCCTCCAATTTTCTTCCTCAAAATC
AATGGCGTATTTGGAAAAAGGCAAGTTTTTTATCTTCCTTTTGCTCTTCT
TTTCCTTTTCTCTTCATGTTTCCAGCACCCCTTTAGACCACAAATCATGT
TCAGTAGAATCGAAGCTGGACCCCGATTCATGTCAGGAACCTGTTCCTGA
ACCGCCCCAAACAACTAATCATTTGAATCAGCAAGTTTTGTTGGATAAAC
TTGAAGAATTAGTGAGAAATCTCAGTGATTTAGTTGCAAGGTTAGAATCA
AAGCTACCTGACCCTCCTCAAGAAAAGGGTAGGTTACCTCATCAAAGAAA
GggtggtgatgatggtgatggtggtACAATATCAAGTAGTAAACAAGATG
GGGAATTTGAGGGAAAAATCCGAGATGGAGAGAGAGCAAAGGGAATGTCT
GTAACAAAGTACACACCTTTTTGGTCTGAGAGGTTCCAATTTGCATCTGC
TGTGAAGTTGGATTCTGAGGTCACTTGTATAAATGTTTTGCCTTTTAGGG
ATCACGAGGGGCTGAGTAAGTATGTGGCAGTTAGTGATGAGAGGGGAAGA
GTGTATGTGTTCTTGAGGAATGGTGATGTGTTGGTTGAGTTTGATACCTT
GGTGAAGTCCTCTATTACTGCAATGATTTCTTATACTTCGGTTTACAAGA
ATGAGAGTTTTGTAGTAACTGGTCATGAAAATGGAGAAATTTTGTTGCAC
AGGGTTTGGGAGGGAGGGTCTACTGGAGAGGATTATAGTTCTCTTTTCAT
GGAGAATGTTGGTAAGTTTGTGTCACCTGAAAACCGTGAAGAAGGAAGGC
CAGTGACTCTCTTGGAAGTTCATTATGTGGGGAGAATGAAGTACATTCTG
TCTGCTGATACAAGTGGGAAGATCAAGGTTTTTAAGGAAAACGGTTCCTT
GTATGGTTCTGTCATGGCTTCTAGCAGGCCACTGGCTTTCTTGAAGCAAA
GGCTTATGTTCTTGACAGAAACCGGTGCAGGTTCATTGGATCTAAGGGGT
ATGAAAATCAGGGAATCTGAGTGTGAAGGGTTGAACCATTCTGTTGCTAG
AACATATGTTTTTGATGCCATGGAGCGATCCAAAGCCTATGGCTTTACCT
CAGATGGGGAAATGATTTATGTGTTGTTGCTTGGAGATGTGATGAACTTC
AAATGCAGGGTGAGATACAAGAAAAAGTTTGACATGGATGAGCCTCTCGC
ACTGCAAGCAATCAAAGGGTATCTTCTGATTGTTAACCCTGAGAAGGTTT
TTGTGTACAATGTTTCATCTCCACACTATGTGAGAGTTGGTGTGCCAAGG
CTTGTTTTCTCCCCAAGTCTTGATGAACTGAGATCATCATTCTTGAACAG
TCCAATCCCGGGTTTGGATGCTGAAACAAAAGTGATACCTTTGATAGGCA
CTGACAGGGAAAAACTTGTGATTGTTGGGCTTGGAGGTGGGTATGTTGGG
ATGTATCATTCAAATCTACCTATCTTCAAAGGGGAATTCAACACCATGCT
ATGGACTAGTCCTGTGTTGTTCTTTGTGCTTTTCTTGTTTGGTGCTTGGC
ACTTTTTTGCCAAGAAGAAAGAAGCACTTACATCATGGGGACCAGATGAC
CCTTTCACTTCCACTTCAGCTACCACCAATGCACCTTTGGCATCTGCATC
TGCAGATAGATCTTATGGAGATTCTAGCTCAAGAAGCACTGAAGTCATGG
ATCTTAGAGGTGGAGCTCTCAGAGCTCCTCCAAGAAGGTATGGTTCTCCT
TCAAGGTATCctggtgctgctgctgctgctgctgcAAGTTCTTATAGACT
TGGTGCTTCCTCAGATCACAATGCTAGACCAGCCTCGGTTGATCCAGATT
TTCGTGGAGCTTCTGAGCTGAAATATAGGGCCACCACCATGGATCCTCCG
GGTTTTCCCAAGAGAAGAGAGGGCATGTTTGTACCAAACCAAGTTGTAAA
TGAGCGCAGTTGAGTGGGAGAGTTAATTGCATGAGCTTTTTTTTTTCTAA
CCAGTTTCAACTTTCCTTACCTTAGCTTTAAATCTTATCAGATCCTTCAG
CATCACTCTGCTATTTGGTTTGCTGCTTCCTTTTTTAACTTTCAAGTTGT
TGCACAAAAGAGGGAAATAAATTATATTGAGAAACTTGCTCGTCCTTTTT
ACTCCCATTCCCACTCCggattctctgtaaggtttttctgtattatttct
ctactgtgtttgcaaaatacactgattttgatgttt
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protein sequence of Vigun08g016900.1_Vu_IT97K-499-35_v1.1

>Vigun08g016900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g016900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g016900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=654bp
MAYLEKGKFFIFLLLFFSFSLHVSSTPLDHKSCSVESKLDPDSCQEPVPE
PPQTTNHLNQQVLLDKLEELVRNLSDLVARLESKLPDPPQEKGRLPHQRK
GGDDGDGGTISSSKQDGEFEGKIRDGERAKGMSVTKYTPFWSERFQFASA
VKLDSEVTCINVLPFRDHEGLSKYVAVSDERGRVYVFLRNGDVLVEFDTL
VKSSITAMISYTSVYKNESFVVTGHENGEILLHRVWEGGSTGEDYSSLFM
ENVGKFVSPENREEGRPVTLLEVHYVGRMKYILSADTSGKIKVFKENGSL
YGSVMASSRPLAFLKQRLMFLTETGAGSLDLRGMKIRESECEGLNHSVAR
TYVFDAMERSKAYGFTSDGEMIYVLLLGDVMNFKCRVRYKKKFDMDEPLA
LQAIKGYLLIVNPEKVFVYNVSSPHYVRVGVPRLVFSPSLDELRSSFLNS
PIPGLDAETKVIPLIGTDREKLVIVGLGGGYVGMYHSNLPIFKGEFNTML
WTSPVLFFVLFLFGAWHFFAKKKEALTSWGPDDPFTSTSATTNAPLASAS
ADRSYGDSSSRSTEVMDLRGGALRAPPRRYGSPSRYPGAAAAAAASSYRL
GASSDHNARPASVDPDFRGASELKYRATTMDPPGFPKRREGMFVPNQVVN
ERS*
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mRNA from alignment at Vu08:1424174..1426659+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g016900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g016900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g016900.1; organism=Vigna unguiculata; type=mRNA; length=2486bp; location=Sequence derived from: Vu08:1424174..1426659+ (Vigna unguiculata
GGATTATCTGATGCAGATATGGTCCAAACAAAGCTATATCTGACCAGATC
ATATATCCTCAGTTACAGAACATTTGAACTGATCTCAATTTAGTTTTTTG
TCTTGTTTTCTGTTACTTAATTCACATGTTAGCCCTAATTCAACCTCAGT
CAATACACTGTCCTGTATCTTACATGGATATCTGCTAAATTTCCTATTAC
CAGATCCATCAACTTCCAAGACACACCCTCCAATTTTCTTCCTCAAAATC
AATGGCGTATTTGGAAAAAGGCAAGTTTTTTATCTTCCTTTTGCTCTTCT
TTTCCTTTTCTCTTCATGTTTCCAGCACCCCTTTAGACCACAAATCATGT
TCAGTAGAATCGAAGCTGGACCCCGATTCATGTCAGGAACCTGTTCCTGA
ACCGCCCCAAACAACTAATCATTTGAATCAGCAAGTTTTGTTGGATAAAC
TTGAAGAATTAGTGAGAAATCTCAGTGATTTAGTTGCAAGGTTAGAATCA
AAGCTACCTGACCCTCCTCAAGAAAAGGGTAGGTTACCTCATCAAAGAAA
GGGTGGTGATGATGGTGATGGTGGTACAATATCAAGTAGTAAACAAGATG
GGGAATTTGAGGGAAAAATCCGAGATGGAGAGAGAGCAAAGGGAATGTCT
GTAACAAAGTACACACCTTTTTGGTCTGAGAGGTTCCAATTTGCATCTGC
TGTGAAGTTGGATTCTGAGGTCACTTGTATAAATGTTTTGCCTTTTAGGG
ATCACGAGGGGCTGAGTAAGTATGTGGCAGTTAGTGATGAGAGGGGAAGA
GTGTATGTGTTCTTGAGGAATGGTGATGTGTTGGTTGAGTTTGATACCTT
GGTGAAGTCCTCTATTACTGCAATGATTTCTTATACTTCGGTTTACAAGA
ATGAGAGTTTTGTAGTAACTGGTCATGAAAATGGAGAAATTTTGTTGCAC
AGGGTTTGGGAGGGAGGGTCTACTGGAGAGGATTATAGTTCTCTTTTCAT
GGAGAATGTTGGTAAGTTTGTGTCACCTGAAAACCGTGAAGAAGGAAGGC
CAGTGACTCTCTTGGAAGTTCATTATGTGGGGAGAATGAAGTACATTCTG
TCTGCTGATACAAGTGGGAAGATCAAGGTTTTTAAGGAAAACGGTTCCTT
GTATGGTTCTGTCATGGCTTCTAGCAGGCCACTGGCTTTCTTGAAGCAAA
GGCTTATGTTCTTGACAGAAACCGGTGCAGGTTCATTGGATCTAAGGGGT
ATGAAAATCAGGGAATCTGAGTGTGAAGGGTTGAACCATTCTGTTGCTAG
AACATATGTTTTTGATGCCATGGAGCGATCCAAAGCCTATGGCTTTACCT
CAGATGGGGAAATGATTTATGTGTTGTTGCTTGGAGATGTGATGAACTTC
AAATGCAGGGTGAGATACAAGAAAAAGTTTGACATGGATGAGCCTCTCGC
ACTGCAAGCAATCAAAGGGTATCTTCTGATTGTTAACCCTGAGAAGGTTT
TTGTGTACAATGTTTCATCTCCACACTATGTGAGAGTTGGTGTGCCAAGG
CTTGTTTTCTCCCCAAGTCTTGATGAACTGAGATCATCATTCTTGAACAG
TCCAATCCCGGGTTTGGATGCTGAAACAAAAGTGATACCTTTGATAGGCA
CTGACAGGGAAAAACTTGTGATTGTTGGGCTTGGAGGTGGGTATGTTGGG
ATGTATCATTCAAATCTACCTATCTTCAAAGGGGAATTCAACACCATGCT
ATGGACTAGTCCTGTGTTGTTCTTTGTGCTTTTCTTGTTTGGTGCTTGGC
ACTTTTTTGCCAAGAAGAAAGAAGCACTTACATCATGGGGACCAGATGAC
CCTTTCACTTCCACTTCAGCTACCACCAATGCACCTTTGGCATCTGCATC
TGCAGATAGATCTTATGGAGATTCTAGCTCAAGAAGCACTGAAGTCATGG
ATCTTAGAGGTGGAGCTCTCAGAGCTCCTCCAAGAAGGTATGGTTCTCCT
TCAAGGTATCCTGGTGCTGCTGCTGCTGCTGCTGCAAGTTCTTATAGACT
TGGTGCTTCCTCAGATCACAATGCTAGACCAGCCTCGGTTGATCCAGATT
TTCGTGGAGCTTCTGAGCTGAAATATAGGGCCACCACCATGGATCCTCCG
GGTTTTCCCAAGAGAAGAGAGGGCATGTTTGTACCAAACCAAGTTGTAAA
TGAGCGCAGTTGAGTGGGAGAGTTAATTGCATGAGCTTTTTTTTTTCTAA
CCAGTTTCAACTTTCCTTACCTTAGCTTTAAATCTTATCAGATCCTTCAG
CATCACTCTGCTATTTGGTTTGCTGCTTCCTTTTTTAACTTTCAAGTTGT
TGCACAAAAGAGGGAAATAAATTATATTGAGAAACTTGCTCGTCCTTTTT
ACTCCCATTCCCACTCCGGATTCTCTGTAAGGTTTTTCTGTATTATTTCT
CTACTGTGTTTGCAAAATACACTGATTTTGATGTTT
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Coding sequence (CDS) from alignment at Vu08:1424174..1426659+

>Vigun08g016900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g016900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g016900.1; organism=Vigna unguiculata; type=CDS; length=1962bp; location=Sequence derived from: Vu08:1424174..1426659+ (Vigna unguiculata
ATGGCGTATTTGGAAAAAGGCAAGTTTTTTATCTTCCTTTTGCTCTTCTT
TTCCTTTTCTCTTCATGTTTCCAGCACCCCTTTAGACCACAAATCATGTT
CAGTAGAATCGAAGCTGGACCCCGATTCATGTCAGGAACCTGTTCCTGAA
CCGCCCCAAACAACTAATCATTTGAATCAGCAAGTTTTGTTGGATAAACT
TGAAGAATTAGTGAGAAATCTCAGTGATTTAGTTGCAAGGTTAGAATCAA
AGCTACCTGACCCTCCTCAAGAAAAGGGTAGGTTACCTCATCAAAGAAAG
GGTGGTGATGATGGTGATGGTGGTACAATATCAAGTAGTAAACAAGATGG
GGAATTTGAGGGAAAAATCCGAGATGGAGAGAGAGCAAAGGGAATGTCTG
TAACAAAGTACACACCTTTTTGGTCTGAGAGGTTCCAATTTGCATCTGCT
GTGAAGTTGGATTCTGAGGTCACTTGTATAAATGTTTTGCCTTTTAGGGA
TCACGAGGGGCTGAGTAAGTATGTGGCAGTTAGTGATGAGAGGGGAAGAG
TGTATGTGTTCTTGAGGAATGGTGATGTGTTGGTTGAGTTTGATACCTTG
GTGAAGTCCTCTATTACTGCAATGATTTCTTATACTTCGGTTTACAAGAA
TGAGAGTTTTGTAGTAACTGGTCATGAAAATGGAGAAATTTTGTTGCACA
GGGTTTGGGAGGGAGGGTCTACTGGAGAGGATTATAGTTCTCTTTTCATG
GAGAATGTTGGTAAGTTTGTGTCACCTGAAAACCGTGAAGAAGGAAGGCC
AGTGACTCTCTTGGAAGTTCATTATGTGGGGAGAATGAAGTACATTCTGT
CTGCTGATACAAGTGGGAAGATCAAGGTTTTTAAGGAAAACGGTTCCTTG
TATGGTTCTGTCATGGCTTCTAGCAGGCCACTGGCTTTCTTGAAGCAAAG
GCTTATGTTCTTGACAGAAACCGGTGCAGGTTCATTGGATCTAAGGGGTA
TGAAAATCAGGGAATCTGAGTGTGAAGGGTTGAACCATTCTGTTGCTAGA
ACATATGTTTTTGATGCCATGGAGCGATCCAAAGCCTATGGCTTTACCTC
AGATGGGGAAATGATTTATGTGTTGTTGCTTGGAGATGTGATGAACTTCA
AATGCAGGGTGAGATACAAGAAAAAGTTTGACATGGATGAGCCTCTCGCA
CTGCAAGCAATCAAAGGGTATCTTCTGATTGTTAACCCTGAGAAGGTTTT
TGTGTACAATGTTTCATCTCCACACTATGTGAGAGTTGGTGTGCCAAGGC
TTGTTTTCTCCCCAAGTCTTGATGAACTGAGATCATCATTCTTGAACAGT
CCAATCCCGGGTTTGGATGCTGAAACAAAAGTGATACCTTTGATAGGCAC
TGACAGGGAAAAACTTGTGATTGTTGGGCTTGGAGGTGGGTATGTTGGGA
TGTATCATTCAAATCTACCTATCTTCAAAGGGGAATTCAACACCATGCTA
TGGACTAGTCCTGTGTTGTTCTTTGTGCTTTTCTTGTTTGGTGCTTGGCA
CTTTTTTGCCAAGAAGAAAGAAGCACTTACATCATGGGGACCAGATGACC
CTTTCACTTCCACTTCAGCTACCACCAATGCACCTTTGGCATCTGCATCT
GCAGATAGATCTTATGGAGATTCTAGCTCAAGAAGCACTGAAGTCATGGA
TCTTAGAGGTGGAGCTCTCAGAGCTCCTCCAAGAAGGTATGGTTCTCCTT
CAAGGTATCCTGGTGCTGCTGCTGCTGCTGCTGCAAGTTCTTATAGACTT
GGTGCTTCCTCAGATCACAATGCTAGACCAGCCTCGGTTGATCCAGATTT
TCGTGGAGCTTCTGAGCTGAAATATAGGGCCACCACCATGGATCCTCCGG
GTTTTCCCAAGAGAAGAGAGGGCATGTTTGTACCAAACCAAGTTGTAAAT
GAGCGCAGTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding