Vigun08g019900.1

Transcript Overview
NameVigun08g019900.1
Unique NameVigun08g019900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1885
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:1719744..1722924 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuR376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL624Pisum sativum Cameor genome v1aPisum sativum
pvvuL057Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL424Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL925Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL771Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL337Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0483Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0492Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL1040Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL693Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL1204Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1205Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1303Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0115Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0366Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0754Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0920Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL073Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL129Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL198Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL653Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR608Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL450Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL421Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL390Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL448Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL560Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR383Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR397Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR399Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL306Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL473Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL599Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL324Cicer arietinum
carvuL521Cicer arietinum
ccavuL432Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL496Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL549Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR652Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR657Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR677Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR698Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR667Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR715Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL135Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL227Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL288Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL480Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL146Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL242Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL302Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL496Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL056Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL169Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL250Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL677Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR466Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg35259.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.03G176200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Ca_08821.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigan.03G276700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-KK1_012288Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014647026.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.06G216200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Psat06G0028000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.06G185700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_10839.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_24480Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_06G01500.1Vigna umbellata FF25 genome v1.0Vigna umbellata
PvulFLAVERTChr01.1000147Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_09144.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
XM_058869235.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
LR48_mrnaVigan01g331500Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Phvul.001G018400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_10857Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
PvulFLAVERTChr11.1000337Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vum_03G01946.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-TanjilR_14671Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.3g227720.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.3g185200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
LR48_mrnaVigan08g167000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
evm.model.Chr08.536Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va07G069330.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_09381.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g019900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g019900Vigun08g019900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g019900.1Vigun08g019900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g019900.1_Vu_IT97K-499-35_v1.1Vigun08g019900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g019900.1.v1.1.CDS.4Vigun08g019900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g019900.1.v1.1.CDS.3Vigun08g019900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g019900.1.v1.1.CDS.2Vigun08g019900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g019900.1.v1.1.CDS.1Vigun08g019900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g019900.1.v1.1.three_prime_UTR.1Vigun08g019900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g019900.1.v1.1.five_prime_UTR.1Vigun08g019900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: REM16_ARATH (B3 domain-containing protein REM16 OS=Arabidopsis thaliana OX=3702 GN=REM16 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 9.790e-45
Identity = 75/140 (53.57%), Postives = 96/140 (68.57%), Query Frame = 1 
Query:   10 QNCNGCRSWEEDIYWSHFQFQHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGD-TLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKE---AEHVG 417
            +NC  C  WEE++YW+HFQ  HF Q L  G+   L +P+ FS + K+K P  V LK PSGVT+NV +    + T+    GW++FVKDH L+END LVFK++G S+F+VLVFDG +LCEK  SYFVRKCGH E   A H G
Sbjct:    3 ENCEDCMKWEEELYWTHFQTLHFTQLLLPGFHNRLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTG 142

HSP 2 Score: 98.5969 bits (244), Expect = 1.508e-21
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = 1 
Query:  796 EAAEPVSAVRSAAQEVYISNRRPVTDDEI------KNALALAQASRTDDSLVVVMRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKGEWVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVLGMTIFR 1218
            E   P+S  +   +E+   N     D E+      K AL+LA+ + + D  +V M+ SHV  + F+++P KW  +++    Q+V+++ ++ +W  +++    R +GG++ GWK FV DNNL E DVCVF+PA    + L L + IFR
Sbjct:  173 EGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSLAKRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFR 319
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y1176_ORYSJ (B3 domain-containing protein Os11g0197600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os11g0197600 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 6.025e-30
Identity = 93/380 (24.47%), Postives = 175/380 (46.05%), Query Frame = 1 
Query:  106 QHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKEGHIPLKAGVECASPGKSVHANGTKEPINVPFETPTPSEEAFNADVESAGAEQVTSVGVPLSAVPSETANGKRIRKLASVVKHVQTKRRGRGRPAKVSHVVDRALDWVSGLEAAEPVSAVRSAAQEVYISNRRPVTDDEIKNALALAQASRTDDSLVV-VMRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKGE-WVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVLGMTIFRVVEEIVP 1239
            + + +P +F+  L+ +P   V+L   SG  W+  + +  +  +   GW++FV+D+ ++   FLVF Y+  SQF V VF+   + +K  ++         + H   ++  K ++ E  M    I  +           +    T++   +  +     +++  A+V  +   +        S V S + N  R    +S   +  +K          S      + ++SG  +       +   Q   IS RRPVT+ E  +AL  A+  ++ +   V +M  S+VY  FF+++P +++ E +   ++ + L   +G+ W   Y Y++ R  G  +GGW  F + NNLE++DVCVF+   + N    + + I+RVV EI P
Sbjct:   43 ERMKIPSSFNQCLQNQPTGMVSLVDRSGNKWSAELTSDSEGFFFVHGWKEFVRDNSIQCGQFLVFTYDKRSQFSVTVFEPSGI-DKISTF---------SAHPSKNVIIKTESDEGGMVTAAITTEKMAPALKENNGITGKRTRDVDYLMEDRVVVFKKSSEANVCESSRRKRAGASAGKSKVTSTSHNSTRGSSCSSDEDNSSSK----------SPNPPFLMRFLSGEVSRRGRCVSKGQRQLTVISQRRPVTEAEKDHALQRAREFKSKNPFAVQIMMESYVYVGFFMNIPCEFVRECLPHTNKRITLWDPQGKAWEVNYVYYSDRSVGSFSGGWGKFAVGNNLEKFDVCVFELVQKDN----IKVHIYRVVPEITP 398
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y1235_ORYSJ (B3 domain-containing protein Os01g0723500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0723500 PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 2.761e-24
Identity = 106/406 (26.11%), Postives = 167/406 (41.13%), Query Frame = 1 
Query:   73 HFVQFLRTGYDQHLALPKTFSDNLK----------KKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEK-----ACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKEGHIPLKAGVECASPGKSVHANGTKEPINVPFETPTPSEEAFNADVESAGAEQVTSVGVPLSAVPSETANGKRIRKLASVVKHVQTKRRGRGRPAKVSHVVDRALDWVSGLEAAEPVSAVRSAAQEVYISNRRPVTDDEIKNALALAQASRTDDSLVVV-MRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKGE-WVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVLGMTIFRVVEEIVP 1239
            HF + L   + Q L +P  F  ++           K+      L+GPSG TW V +    +  +   GW +FV+D  L+E +F+VF+Y+G ++F  +VFD  + CE+            +           S +  R   +   KE  +  +A      P + V ++ T EP +   +    ++E                  +P+  +P+ +A+  R     ++       RRG  +   +    D AL       A+ P S  R      Y+S RR V   E + A  +A A R+     V+ M   HVY  F +  P  +  +H+     DV+LR   G+ W   Y   N R    L+ GW  F   N LEE D CVF    ++  +    + IFRVVE  VP
Sbjct:   20 HFFKVLVGDFKQRLKIPPNFCKHIPWEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQALRELEFVVFRYDGNTRFTAMVFD-RTACEREDLMGGGGGDRPRKKRGRPRTAAASRDAARPKKDSVGKE-MVTYRASPSGGQPLQIVDSSWTPEPGSTAVKNEEDADE------------------LPVCELPASSASPPRHVPEGALDADGGAARRGAAKTRSLQD--DLAL-------ASIPPSIRRYKG---YVSRRRAVATAERQRATEIAHAFRSPLPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSVLY-IPNTRDR--LSRGWCAFARGNCLEEGDYCVF----ELVAAAEFRVHIFRVVEPAVP 386
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y3221_ORYSJ (B3 domain-containing protein Os03g0622100 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622100 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.210e-23
Identity = 61/172 (35.47%), Postives = 92/172 (53.49%), Query Frame = 1 
Query:   10 QNCNGCRSWEEDIYWSHF--QFQHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDT--LYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKEGHI---PLKAGVECAS 504
            +NC+ C+ W+E  YWSH     +HF+ ++   + + + +P  F++N        V LK PSG TW++  V   DT  L L  GW++FV  + ++END L+F+Y+G S FDVL+FD  S CEKA  +FV   G    E   G+    RD  ++   +  +   P K    C S
Sbjct:    8 KNCSVCKEWQEHCYWSHMADDCKHFLTYMVGDFTESMIVPSRFANNFNGHISEVVNLKSPSGKTWSIG-VAYSDTGELVLRSGWKEFVDANGVQENDCLLFRYSGVSSFDVLIFD-PSGCEKASPHFVENRGFGREEKSAGAEGGGRDGDKNGHHQHQLEMTPHKNSSRCRS 177
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y3222_ORYSJ (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.376e-22
Identity = 53/153 (34.64%), Postives = 85/153 (55.56%), Query Frame = 1 
Query:   10 QNCNGCRSWEEDIYWSHF--QFQHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMV-TRGDTLYLACGWEQFVKDHCLKENDFLVFKYNG-ESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDP 456
            +NC+ C+ W+E  YWSH     +HF++ +   + + + +P  F++N        V L+ PSG TW++ +  +    L L  GW++FV  + ++E D L+F+Y+G  S FDVL+FD  S CEKA  +FV   G   AE+  G+    R+    P
Sbjct:    8 KNCSVCKEWQEHCYWSHMADHSKHFLKHMVGDFTESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEEGDCLLFRYSGVSSSFDVLIFD-PSGCEKASPHFVGSHGFGRAENSAGAEQGGRNGRRTP 159
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 4.178e-20
Identity = 92/403 (22.83%), Postives = 157/403 (38.96%), Query Frame = 1 
Query:   67 FQHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFD---------GGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKEGHIPLKAGVECASPGKSVHANGTKEPINVPFETPTPSEEAFNADVESAGAEQVTSVGVPLSAVPSETANGKRIRKLASVVKHVQTKRRGRGR----PAKVSHVVDRALDWVSGLEAAEPVSAVRSAAQEVYISNRRPVTDDEIKNALALAQASR-TDDSLVVVMRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKGEWVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVLGMTIFRVVEEI 1233
            F H + F  T  ++ L +P  F    K +    VAL  P G  W V +    + ++   GW++FV  + ++    L+F+Y G S F V +F+            L + A ++F R    ++ E     +         P+ E  +P   G   ++             I   F  P  +EE                   P   +P                     K+RGR +    P +++    R  D              RS   E   + +R VT +E + A+  A+    T+    VV+RPS++Y+   + +P+ +  ++++ +S  + ++  + +W  R  Y   R     + GW  F L+NNL E DVCVF+         VL +T FRV E +
Sbjct:    5 FFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRARLFEDLEDEDAEVIFPSSVYPSPLPESTVPANKGYASSA-------------IQTLFTGPVKAEEP-----------------TPTPKIP---------------------KKRGRKKKNADPEEINSSAPRDDD-----------PENRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKAGR--AKFSQGWYEFTLENNLGEGDVCVFELL--RTRDFVLKVTAFRVNEYV 341
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y1223_ORYSJ (B3 domain-containing protein Os12g0592300 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0592300 PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.421e-19
Identity = 49/135 (36.30%), Postives = 67/135 (49.63%), Query Frame = 1 
Query:    1 MGVQNCNGCRSWEEDIYWSHFQFQH--FVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVF----KYNGESQFDVLVFDGGSLCEKACSYFVRK 387
            MG + C  CR W+E  Y  H       F + +   +   +++P+  +D    +      LK PSG TW V++    D L L  GWE F K H L+END L F    + NG   FDVL+FD  S CEK   +F+ K
Sbjct:    1 MGEKGCESCREWQEHCYREHMDVSRIRFFRLMTGDFAHGISIPEKVADRFSGQITKGFNLKAPSGETWRVSVEKVADELILMSGWEDFAKAHELQENDLLFFTCNGRCNGSFSFDVLIFD-ASGCEKVSCFFIGK 134
[Close]
BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y3622_ARATH (B3 domain-containing protein At3g06220 OS=Arabidopsis thaliana OX=3702 GN=At3g06220 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 6.861e-15
Identity = 41/132 (31.06%), Postives = 68/132 (51.52%), Query Frame = 1 
Query:   70 QHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTEDPMKE 465
            + +  FL       L +P+++ ++L ++ P    L G  G  W VAM+++ + +YLA GWE FV D+ LK+ +FL F ++G   ++V ++  GS  E      V +    E+E    SL    D T  P +E
Sbjct:    9 RFYTVFLSCVSSNSLLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGEFLTFVFDGYKSYEVSIYGRGSCKETRAVVHVEEIS-DESESDNDSLGSLVDVTPMPAEE 139
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BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y3440_ARATH (B3 domain-containing protein At4g34400 OS=Arabidopsis thaliana OX=3702 GN=At4g34400 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.164e-13
Identity = 32/98 (32.65%), Postives = 55/98 (56.12%), Query Frame = 1 
Query:   70 QHFVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQFDVLVFDGGSLCEK 363
            + F  F+     + + +P ++ D++  + P  V L+GP G +W VA   + D +  + GW +FV+D+ L + DFL F YNG   F+V +F G   C++
Sbjct:   15 RFFTVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPKFVRDNTLNDGDFLTFAYNGAHIFEVSIFRGYDACKE 112
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BLAST of Vigun08g019900.1 vs. DB:Swiss
Match: Y1209_ORYSJ (B3 domain-containing protein LOC_Os12g40090 OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0591500 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 6.215e-13
Identity = 54/168 (32.14%), Postives = 72/168 (42.86%), Query Frame = 1 
Query:   76 FVQFLRTGYDQHLALPKTFSDNLKKKPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVFKYNGESQ----FDVLVFDGGSLCEKACSYFVRKCGH---KEAEHVGGS-----LNKKRDTTEDPMKEGHIPLKAGVECASPGKSVHANGTKEP 543
            F + +   +   +++P+  ++    +      LK PSG TW V +    D L L  GWE F K H L+END L F  NG       FDVL+FD  S CEK   +F  K      K    +GG      L+   + T  P      P KA       GK+   N  KEP
Sbjct:    8 FFRLMTGDFAHGISIPEKVAEIFSGQITKGFNLKSPSGETWRVGVAKVADELILKSGWEDFAKAHELQENDLLFFTCNGHGNGSCSFDVLIFD-ASGCEKVSCFFTGKKNSYMCKNFNSIGGQVAGQYLSSDSEDTSTPSVLIGSPHKASTSKKLSGKT-KTNPRKEP 173
The following BLAST results are available for this feature:
BLAST of Vigun08g019900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
REM16_ARATH9.790e-4553.57B3 domain-containing protein REM16 OS=Arabidopsis ... [more]
Y1176_ORYSJ6.025e-3024.47B3 domain-containing protein Os11g0197600 OS=Oryza... [more]
Y1235_ORYSJ2.761e-2426.11B3 domain-containing protein Os01g0723500 OS=Oryza... [more]
Y3221_ORYSJ1.210e-2335.47B3 domain-containing protein Os03g0622100 OS=Oryza... [more]
Y3222_ORYSJ6.376e-2234.64B3 domain-containing protein Os03g0622200 OS=Oryza... [more]
VRN1_ARATH4.178e-2022.83B3 domain-containing transcription factor VRN1 OS=... [more]
Y1223_ORYSJ1.421e-1936.30B3 domain-containing protein Os12g0592300 OS=Oryza... [more]
Y3622_ARATH6.861e-1531.06B3 domain-containing protein At3g06220 OS=Arabidop... [more]
Y3440_ARATH2.164e-1332.65B3 domain-containing protein At4g34400 OS=Arabidop... [more]
Y1209_ORYSJ6.215e-1332.14B3 domain-containing protein LOC_Os12g40090 OS=Ory... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 26..116
e-value: 2.7E-17
score: 73.5
coord: 310..408
e-value: 5.1E-11
score: 52.6
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 311..400
e-value: 4.4E-13
score: 49.0
coord: 36..112
e-value: 1.0E-15
score: 57.4
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 23..116
score: 15.58
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 310..408
score: 10.25
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 309..406
e-value: 2.73283E-18
score: 77.7533
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 25..114
e-value: 2.68483E-19
score: 80.4497
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 289..410
e-value: 1.8E-23
score: 84.6
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3D2.40.330.10coord: 18..119
e-value: 7.5E-27
score: 95.3
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 21..114
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILY101936DNA-binding pseudobarrel domaincoord: 310..394

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g019900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g019900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g019900.1; organism=Vigna unguiculata; type=mRNA; length=1885bp
CCTTACTTTTGTTACATTGTAACAAGTGCTTCTAACTATTAGTGGGTTTG
GACTGTGTTTTGTCATTCCAGTTCATACTCTTTGGGCTGTGTGCCTTTGC
TCTCAACTCATACCCTTGCACCATCTCTTGGACTCAAACCACTAAAGATT
GCAACTTTTTCATCTTTGTCTGTTGTTTCTCAAATGGGGGTTCAGAATTG
TAATGGTTGCAGATCCTGGGAGGAGGACATTTACTGGTCTCATTTTCAAT
TCCAACATTTCGTGCAGTTTCTCCGAACGGGTTATGATCAACACCTTGCA
CTTCCGAAGACATTTTCAGATAACTTAAAGAAGAAGCCCCCTGCAAATGT
GGCCCTAAAGGGTCCTAGTGGTGTTACGTGGAACGTGGCAATGGTTACTA
GAGGAGATACCTTGTACCTTGCATGTGGTTGGGAGCAGTTTGTGAAAGAC
CACTGTTTGAAGGAGAATGATTTCCTGGTCTTTAAGTACAATGGTGAATC
TCAGTTTGATGTTTTAGTGTTTGATGGGGGGAGCTTGTGTGAGAAGGCAT
GTTCTTATTTTGTTCGCAAATGTGGGCACAAAGAAGCAGAACATGTGGGT
GGAAGTCTCAACAAGAAAAGGGACACTACAGAAGATCCTATGAAAGAAGG
TCACATCCCTTTAAAAGCTGGTGTGGAATGTGCTTCACCTGGGAAATCGG
TGCATGCTAATGGTACCAAGGAACCAATTAATGTCCCTTTTGAAACTCCT
ACTCCTAGTGAAGAGGCTTTCAATGCTGATGTTGAATCTGCTGGTGCTGA
GCAAGTTACATCTGTTGGAGTCCCTCTTTCAGCTGTTCCCAGCGAAACTG
CTAATGGGAAAAGGATCAGAAAGCTTGCTTCAGTTGTTAAGCATGTGCAG
ACCAAACGGAGGGGCAGGGGCAGACCAGCTAAAGTGTCTCATGTTGTAGA
CAGAGCACTTGACTGGGTTTCTGGACTAGAAGCTGCTGAACCTGTTTCTG
CGGTTAGAAGTGCGGCACAAGAGGTATATATTTCAAATAGAAGGCCTGTC
ACAGATGATGAGATTAAAAATGCCTTAGCATTGGCTCAGGCATCACGCAC
TGATGACAGTTTGGTTGTAGTCATGCGACCTTCTCACGTCTACAAGAGAT
TCTTTGTGTCAATGCCCAACAAGTGGATTGGAGAACACATCGCTCCAATG
TCTCAAGATGTGATCTTGCGCACGGAAAAGGGTGAATGGGTTGCTAGATA
CAGCTACCATAATATTCGTCATACTGGTGGACTCACAGGTGGGTGGAAAC
ACTTTGTGTTGGACAACAACCTGGAAGAGTACGATGTTTGTGTGTTTAAA
CCAGCTGGCCAAATGAACGAGAGCTTGGTCCTTGGTATGACCATTTTCAG
AGTTGTTGAGGAGATTGTTCCTCTTTCTGCCATGTCTCCAACAGGAAAAA
GAGGAAGAAAACCAGCACAGAATGTTAATCTCACTGAACCATAGTCTGCA
TCATCATGAGGGTGAATGAAAGCATTGCAGTGTAAGTTGATAATTATCTT
AGGAGCTCAGACCAAGTTCTCTAGTTGTGTGTATTGTGGATATTGAGTTA
TATCGTTTAGCCTTATTATCAGTCTTCTAAGGGGGTGTAGTGTAGTTATA
TATAAATATCTATGTATGTACTTCTTATTGGTGCTGTTAGACCTTGCTGG
TTTAAATATGAACTGATATCTGCAGAGTTTTTAGGTGTTGAGTTTGAGTT
GAACAAATCTAGTGTGATGGAATTTTAGTCTTTTTTATCAGTGCCTCAAA
GTAATATGTATTCAAGATGTTGGTTTTGATTATCTGAGGACATTTATGAA
GAGAAGATAAAGTTTATTAAAACTTGAAAAGTGGA
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protein sequence of Vigun08g019900.1_Vu_IT97K-499-35_v1.1

>Vigun08g019900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g019900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g019900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=437bp
MGVQNCNGCRSWEEDIYWSHFQFQHFVQFLRTGYDQHLALPKTFSDNLKK
KPPANVALKGPSGVTWNVAMVTRGDTLYLACGWEQFVKDHCLKENDFLVF
KYNGESQFDVLVFDGGSLCEKACSYFVRKCGHKEAEHVGGSLNKKRDTTE
DPMKEGHIPLKAGVECASPGKSVHANGTKEPINVPFETPTPSEEAFNADV
ESAGAEQVTSVGVPLSAVPSETANGKRIRKLASVVKHVQTKRRGRGRPAK
VSHVVDRALDWVSGLEAAEPVSAVRSAAQEVYISNRRPVTDDEIKNALAL
AQASRTDDSLVVVMRPSHVYKRFFVSMPNKWIGEHIAPMSQDVILRTEKG
EWVARYSYHNIRHTGGLTGGWKHFVLDNNLEEYDVCVFKPAGQMNESLVL
GMTIFRVVEEIVPLSAMSPTGKRGRKPAQNVNLTEP*
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mRNA from alignment at Vu08:1719744..1722924-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g019900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g019900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g019900.1; organism=Vigna unguiculata; type=mRNA; length=3181bp; location=Sequence derived from: Vu08:1719744..1722924- (Vigna unguiculata
CCTTACTTTTGTTACATTGTAACAAGTGCTTCTAACTATTAGTGGGTTTG
GACTGTGTTTTGTCATTCCAGTTCATACTCTTTGGGCTGTGTGCCTTTGC
TCTCAACTCATACCCTTGCACCATCTCTTGGACTCAAACCACTAAAGATT
GCAACTTTTTCATCTTTGTCTGTTGTTTCTCAAATGGGGGTTCAGAATTG
TAATGGTTGCAGATCCTGGGAGGAGGACATTTACTGGTCTCATTTTCAAT
TCCAACATTTCGTGCAGTTTCTCCGAACGGGTTATGATCAACACCTTGTT
AGTATTCCACCCCACCTCTTACTTTTCTGCTGTGAATCATGATAAATCTG
GCAAGTAGTGGAACATGGGGCTTCATTTGAGTTCATGAACTTCATTCTAT
GTCCACATTTTTTTGGGGGTAACCCTTTGGTTGGTTCGTTCTATCATCTC
TTTTGTTTCGATTTTTTGGTAAAAAAAATTGCATGCACCCTGATATGATT
GTGGTCGTGTGTGTAGCTATGTCTGCATGGATGAAGGGCAAACATGAAAA
GAAAGAACATGTGATGTGGTTGTTGTTGTTGTCCCTGTTCTTGTGTTCCT
TGTTTGCAGACACTATCTACTTTGCATGCTTGATATGGAAATGGTTGGTT
ATCAATCAAGTTGTTGTGATTAGTCTTTGATGTGTATCCTATTCTACCTG
CATGTTTTTACAGGTTATTGTATCTCGTTCTCAATGATGAAATTTGAAGT
TTGTTTGCAGGCACTTCCGAAGACATTTTCAGATAACTTAAAGAAGAAGC
CCCCTGCAAATGTGGCCCTAAAGGGTCCTAGTGGTGTTACGTGGAACGTG
GCAATGGTTACTAGAGGAGATACCTTGTACCTTGCATGTGGTTGGGAGCA
GTTTGTGAAAGACCACTGTTTGAAGGAGAATGATTTCCTGGTCTTTAAGT
ACAATGGTGAATCTCAGTTTGATGTTTTAGTGTTTGATGGGGGGAGCTTG
TGTGAGAAGGCATGTTCTTATTTTGTTCGCAAATGTGGGCACAAAGAAGC
AGAACATGTGGGTGGAAGTCTCAACAAGAAAAGGGACACTACAGAAGATC
CTATGAAAGAAGGTCACATCCCTTTAAAAGCTGGTGTGGAATGTGCTTCA
CCTGGGAAATCGGTGCATGCTAATGGTACCAAGGAACCAATTAATGTCCC
TTTTGAAACTCCTACTCCTAGTGAAGAGGCTTTCAATGCTGATGTTGAAT
CTGCTGGTGCTGAGCAAGTTACATCTGTTGGAGTCCCTCTTTCAGCTGTT
CCCAGCGAAACTGCTAATGGGAAAAGGATCAGAAAGCTTGCTTCAGTTGT
TAAGCATGTGCAGACCAAACGGAGGGGCAGGGGCAGACCAGCTAAAGTGT
CTCATGTTGTAGACAGAGCACTTGACTGGGTTTCTGGTAACATGTTTACT
TGTGAAGAAGTGAAAGGAAATGATATTACTACTGTTTAATGGACTTTTGT
TTTTGTCTTATGAAGATTAAATTTGAGAATTTTTTATTTACTGACCAGTT
TTTTATTCTTCAAAACCACAATATTTTTCTTAGGCTTTGAACTTGATATG
AAATAATGGGAGCATATGAGACAGTATGGTTGGTCAAACCTATGATTGAA
AGCAAGTTACGTTTGTGAAATGTCTTAATTCAAATTAAGGGTAAATCCAA
CATTTCTTTCTGAAACTTTGTTTGAAAACAAGTTATATAAGTAATAGCAT
AAGGCAAGACTCGCTTTTGCATATTTGTGCCCTGAAGCCTACAACAGATA
TCAACTAATTGATTTGATCATAGTTTGCTGTTATTGCTTGTGTAGGCTTC
TTGTGTGCGTGTTTTAAACTCAAATGTTGTGTGATTATTTTGACACAACT
TGTTGATGATTTGCATGTACAAAACATGATTGATTATGGAGAAATAATCA
CTTGTTTTATATTCAAAATCTCAGGGAGTTCAAAAATTCAAGTGATTCTT
TCTTGAAAATCAGTTAGACTAGCAGAGGGTTCTCAGTTTGCAAAATTGAT
TAAAAGTAAAAATGGTCTGTTTTTACATTGACCTTATAACACTGCTGTTT
CTGTTTGAATCAATACCAGGACTAGAAGCTGCTGAACCTGTTTCTGCGGT
TAGAAGTGCGGCACAAGAGGTATATATTTCAAATAGAAGGCCTGTCACAG
ATGATGAGATTAAAAATGCCTTAGCATTGGCTCAGGCATCACGCACTGAT
GACAGTTTGGTTGTAGTCATGCGACCTTCTCACGTCTACAAGAGATTCTT
TGTGGTAAACATTTGATTTGTGCCTCACACAATGTTTCACTATTTGATTT
GTGCATACATAAGCTATGCAGAAACTCAATGCATTTTACCATGTTGTCTT
TCCTTCCATTCCAAGTGTTTGTTATTGATTGTAGTAATCCTTTTGTGTGA
GTAGTCAATGCCCAACAAGTGGATTGGAGAACACATCGCTCCAATGTCTC
AAGATGTGATCTTGCGCACGGAAAAGGGTGAATGGGTTGCTAGATACAGC
TACCATAATATTCGTCATACTGGTGGACTCACAGGTGGGTGGAAACACTT
TGTGTTGGACAACAACCTGGAAGAGTACGATGTTTGTGTGTTTAAACCAG
CTGGCCAAATGAACGAGAGCTTGGTCCTTGGTATGACCATTTTCAGAGTT
GTTGAGGAGATTGTTCCTCTTTCTGCCATGTCTCCAACAGGAAAAAGAGG
AAGAAAACCAGCACAGAATGTTAATCTCACTGAACCATAGTCTGCATCAT
CATGAGGGTGAATGAAAGCATTGCAGTGTAAGTTGATAATTATCTTAGGA
GCTCAGACCAAGTTCTCTAGTTGTGTGTATTGTGGATATTGAGTTATATC
GTTTAGCCTTATTATCAGTCTTCTAAGGGGGTGTAGTGTAGTTATATATA
AATATCTATGTATGTACTTCTTATTGGTGCTGTTAGACCTTGCTGGTTTA
AATATGAACTGATATCTGCAGAGTTTTTAGGTGTTGAGTTTGAGTTGAAC
AAATCTAGTGTGATGGAATTTTAGTCTTTTTTATCAGTGCCTCAAAGTAA
TATGTATTCAAGATGTTGGTTTTGATTATCTGAGGACATTTATGAAGAGA
AGATAAAGTTTATTAAAACTTGAAAAGTGGA
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Coding sequence (CDS) from alignment at Vu08:1719744..1722924-

>Vigun08g019900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g019900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g019900.1; organism=Vigna unguiculata; type=CDS; length=1311bp; location=Sequence derived from: Vu08:1719744..1722924- (Vigna unguiculata
ATGGGGGTTCAGAATTGTAATGGTTGCAGATCCTGGGAGGAGGACATTTA
CTGGTCTCATTTTCAATTCCAACATTTCGTGCAGTTTCTCCGAACGGGTT
ATGATCAACACCTTGCACTTCCGAAGACATTTTCAGATAACTTAAAGAAG
AAGCCCCCTGCAAATGTGGCCCTAAAGGGTCCTAGTGGTGTTACGTGGAA
CGTGGCAATGGTTACTAGAGGAGATACCTTGTACCTTGCATGTGGTTGGG
AGCAGTTTGTGAAAGACCACTGTTTGAAGGAGAATGATTTCCTGGTCTTT
AAGTACAATGGTGAATCTCAGTTTGATGTTTTAGTGTTTGATGGGGGGAG
CTTGTGTGAGAAGGCATGTTCTTATTTTGTTCGCAAATGTGGGCACAAAG
AAGCAGAACATGTGGGTGGAAGTCTCAACAAGAAAAGGGACACTACAGAA
GATCCTATGAAAGAAGGTCACATCCCTTTAAAAGCTGGTGTGGAATGTGC
TTCACCTGGGAAATCGGTGCATGCTAATGGTACCAAGGAACCAATTAATG
TCCCTTTTGAAACTCCTACTCCTAGTGAAGAGGCTTTCAATGCTGATGTT
GAATCTGCTGGTGCTGAGCAAGTTACATCTGTTGGAGTCCCTCTTTCAGC
TGTTCCCAGCGAAACTGCTAATGGGAAAAGGATCAGAAAGCTTGCTTCAG
TTGTTAAGCATGTGCAGACCAAACGGAGGGGCAGGGGCAGACCAGCTAAA
GTGTCTCATGTTGTAGACAGAGCACTTGACTGGGTTTCTGGACTAGAAGC
TGCTGAACCTGTTTCTGCGGTTAGAAGTGCGGCACAAGAGGTATATATTT
CAAATAGAAGGCCTGTCACAGATGATGAGATTAAAAATGCCTTAGCATTG
GCTCAGGCATCACGCACTGATGACAGTTTGGTTGTAGTCATGCGACCTTC
TCACGTCTACAAGAGATTCTTTGTGTCAATGCCCAACAAGTGGATTGGAG
AACACATCGCTCCAATGTCTCAAGATGTGATCTTGCGCACGGAAAAGGGT
GAATGGGTTGCTAGATACAGCTACCATAATATTCGTCATACTGGTGGACT
CACAGGTGGGTGGAAACACTTTGTGTTGGACAACAACCTGGAAGAGTACG
ATGTTTGTGTGTTTAAACCAGCTGGCCAAATGAACGAGAGCTTGGTCCTT
GGTATGACCATTTTCAGAGTTGTTGAGGAGATTGTTCCTCTTTCTGCCAT
GTCTCCAACAGGAAAAAGAGGAAGAAAACCAGCACAGAATGTTAATCTCA
CTGAACCATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003340B3_DNA-bd
IPR015300DNA-bd_pseudobarrel_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding