Vigun08g042300.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max OX=3847 GN=HSP17.9-D PE=3 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 7.059e-81 Identity = 138/162 (85.19%), Postives = 150/162 (92.59%), Query Frame = 1 Query: 1 MDFRVMGLESPLFHTLHHMMDMSEERVGE-KTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 MDFRVMGLESPLFHTL HMMDMSE+ G+ KT NAPT +YVRDAKA+AATPADVKEYPNSYVF +DMPGLKSGDIKVQVEDDN+L+I GERKR+EEKE G K+LRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKP+TI+VK+A Sbjct: 1 MDFRVMGLESPLFHTLQHMMDMSEDGAGDNKTHNAPTWSYVRDAKAMAATPADVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKE---GAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQKLPPPEPKKPRTIQVKVA 159
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP21_SOLPE (17.3 kDa class II heat shock protein OS=Solanum peruvianum OX=4082 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 3.179e-70 Identity = 124/162 (76.54%), Postives = 140/162 (86.42%), Query Frame = 1 Query: 1 MDFRVMGLE-SPLFHTLHHMMDMSEERVGEKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 MD R++G++ +PLFHTLHHMM E GE + NAP++ YVRDAKA+AATPADVKEYPNSYVFVVDMPGLKSGDIKVQVE+DNVL+IS + +EEK G KF+RMERRVGK MRKF LPENANTDAISAVCQDGVL+VTVQKLPPPEPKKPKTIEVK+A Sbjct: 1 MDLRLLGIDNTPLFHTLHHMM----EAAGEDSVNAPSKIYVRDAKAMAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEEDNVLLIS---GERKREEEKEGAKFIRMERRVGKFMRKFSLPENANTDAISAVCQDGVLTVTVQKLPPPEPKKPKTIEVKVA 155
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP21_PEA (17.1 kDa class II heat shock protein OS=Pisum sativum OX=3888 GN=HSP17.7 PE=1 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 2.747e-65 Identity = 115/156 (73.72%), Postives = 139/156 (89.10%), Query Frame = 1 Query: 16 MGLESPLFHTLHHMMDMSEERVGEKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 M L+SPLF+TLHH+MD++++ EK NAPT+TYVRDAKA+AATPADVKE+PNSYVF+VDMPG+KSGDIKVQVED+NVL+IS + +EEK GVK+L+MERR+GKLMRKFVLPENAN +AISA+ QDGVL+VTV KLPPPEPKKPKTI+VK+A Sbjct: 1 MDLDSPLFNTLHHIMDLTDD-TTEKNLNAPTRTYVRDAKAMAATPADVKEHPNSYVFMVDMPGVKSGDIKVQVEDENVLLIS---GERKREEEKEGVKYLKMERRIGKLMRKFVLPENANIEAISAISQDGVLTVTVNKLPPPEPKKPKTIQVKVA 152
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP21_IPONI (17.2 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-1 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 3.097e-60 Identity = 111/163 (68.10%), Postives = 136/163 (83.44%), Query Frame = 1 Query: 1 MDFRVMGLESPLFHTLHHMMDMSEERVGEKTQN--APTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 MD R+MG + PLFH H+MD + + +K+ N AP++T++ DAKA+AATPADVKEYPNSYVF++DMPGLKSGDIKVQV+ DNVL ISG +R+ E EEK G K++RMERRVGKLMRKFVLPENAN + I+AVCQDGVL+VTV+ +PPPEPKKP+TIEVKI Sbjct: 1 MDLRLMGFDHPLFH---HIMDYAGD---DKSSNSSAPSRTFMLDAKAMAATPADVKEYPNSYVFIIDMPGLKSGDIKVQVDGDNVLSISG--ERKREAEEKEGAKYVRMERRVGKLMRKFVLPENANKEKITAVCQDGVLTVTVENVPPPEPKKPRTIEVKIG 155
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP21_HELAN (17.9 kDa class II heat shock protein OS=Helianthus annuus OX=4232 GN=HSP17.9 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 3.168e-57 Identity = 109/159 (68.55%), Postives = 137/159 (86.16%), Query Frame = 1 Query: 13 VMGLESPLFHTLHHMMDMSEERV-GEKTQNA-PTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 +MG + PL LH++++ +++ G K+ N+ P++ YVRDA+A+AATPADVKE PNSYVF+VDMPGLKSGDIKVQVE DNVLVISG+R REEEKE GVK++RMERR+GK M+KF LPE+ANTD ISA+CQDGVL+VTV+KLPPPEPKKPKTI+V++A Sbjct: 6 LMGFD-PLLRNLHYILEATDDNTTGNKSNNSGPSRAYVRDARAMAATPADVKECPNSYVFIVDMPGLKSGDIKVQVERDNVLVISGKRNREEEKE---GVKYVRMERRMGKFMKKFALPEDANTDKISAICQDGVLTVTVEKLPPPEPKKPKTIQVQVA 160
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil OX=35883 GN=SHSP-2 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 7.542e-57 Identity = 107/158 (67.72%), Postives = 127/158 (80.38%), Query Frame = 1 Query: 16 MGLESPLFHTLHHMMDMSEE--RVGEKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 GLE L T+ M+D +++ R G P + YVRDAKA+AATPADVKEYPNSYVF+ DMPG+K+ +IKVQVEDDNVLV+SGER E+ E+ GVK+LRMERRVGK MRKFVLPENAN +AI+AV QDGVL VTV+KLPPPEPKKPKT+EVK+A Sbjct: 11 FGLEPQLLSTIQDMLDFADDHDRAGRAPPEQPIRAYVRDAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKD-GVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEVKVA 167
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays OX=4577 GN=HSP18 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 6.839e-55 Identity = 103/161 (63.98%), Postives = 131/161 (81.37%), Query Frame = 1 Query: 1 MDFRVMGLESPLFHTLHHMMDMSEERVGEKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 MD R+ GLE+P LHH++D+ + G+K T+TYVRDA+A+AATPADVKE +Y FVVDMPGL +GDI+VQVED+ VLVISGER+REE ++ K+LRMERR+GK MRKFVLP+NA+ D ++AVC+DGVL+VTV+KLPPPEPKKPKTIE+K+A Sbjct: 1 MDARMFGLETPRVAALHHLLDVPD---GDKAGGGATRTYVRDARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREERED----AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEIKVA 154
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 2.208e-53 Identity = 98/151 (64.90%), Postives = 124/151 (82.12%), Query Frame = 1 Query: 31 PLFHTLHHMMDMSEERVGEKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 P+ L M+++ E+ EKT+N P++ Y+RDAKA+AATPADV E+PN+Y FVVDMPG+K +IKVQVE+DNVLV+SG +R+ E +E GVK++RMERR+GK MRKF LPENA+ D ISAVC DGVL VTVQKLPPPEPKKPKTI+V++A Sbjct: 7 PIISILEDMLEVPEDHNNEKTRNNPSRVYMRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSG--ERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQVQVA 155
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP22_MAIZE (17.8 kDa class II heat shock protein OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 6.093e-53 Identity = 103/167 (61.68%), Postives = 132/167 (79.04%), Query Frame = 1 Query: 1 MDFRVMGLESPLFHTLHHMMDMSEERVGEKTQN------APTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVISGXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 MD + GLE+PL L H++D+ + G N + T+TYVRDA+A+AATPADVKE P +Y FVVDMPGL +GDI+VQVED+ VLV+SGER+REE +++ K+LRMERR+GK MRKFVLP+NA+ D ++AVC+DGVL+VTV+KLPPPEPKKPKTIEVK+A Sbjct: 1 MDAVMFGLETPLMAALQHLLDVPDGDAGAGGDNKTGSGGSATRTYVRDARAMAATPADVKELPGAYAFVVDMPGLGTGDIRVQVEDERVLVVSGERRREEREDD---AKYLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEVKVA 164
BLAST of Vigun08g042300.1 vs. DB:Swiss
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP18.0 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.253e-52 Identity = 101/166 (60.84%), Postives = 128/166 (77.11%), Query Frame = 1 Query: 1 MDFRVMGLESPLFHTLHHMMDMSEERVG----EKTQNAPTQTYVRDAKAIAATPADVKEYPNSYVFVVDMPGLKSGDIKVQVEDDNVLVIS-GXXXXXXXXXXXAGVKFLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVTVQXXXXXXXXXXXTIEVKIA 483 M+ + GLE+PL L H++D+ + G + PT+ YVRDA+A+AATPADVK+ P +Y FVVDMPGLKS DIKVQVE++ +LVIS R+ E+E++ K+LRMERR+GK MRKFVLP+NA+ D ISAVCQDGVL+VTV+KLPPPEPKKPKTIEVK+A Sbjct: 1 MESAMFGLETPLMTALQHLLDIPDGEGGAAGKQGATGGPTRAYVRDARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEVKVA 166 The following BLAST results are available for this feature:
BLAST of Vigun08g042300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g042300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042300.1; organism=Vigna unguiculata; type=mRNA; length=955bpback to top protein sequence of Vigun08g042300.1_Vu_IT97K-499-35_v1.1 >Vigun08g042300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=162bpback to top mRNA from alignment at Vu08:4371203..4372157+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g042300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042300.1; organism=Vigna unguiculata; type=mRNA; length=955bp; location=Sequence derived from: Vu08:4371203..4372157+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:4371203..4372157+ >Vigun08g042300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g042300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g042300.1; organism=Vigna unguiculata; type=CDS; length=486bp; location=Sequence derived from: Vu08:4371203..4372157+ (Vigna unguiculataback to top |