Vigun08g198900.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: RH32_ARATH (DEAD-box ATP-dependent RNA helicase 32 OS=Arabidopsis thaliana OX=3702 GN=RH32 PE=2 SV=1) HSP 1 Score: 855.514 bits (2209), Expect = 0.000e+0 Identity = 429/679 (63.18%), Postives = 534/679 (78.65%), Query Frame = 1 Query: 1 MKRPKSKEFRKQQRVSEQEEIDLLNSWIQFQPPDSGSNPMSLPPLTKSSPVGRLQDN----TYSRYAGASRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQMLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFLNQXXXXXXXXXXXXLVEPEDSSKKNVLEVSRNKIDTDPFKDEEIENDLFQLADPATNEDKVKSSEIEEI-IPGTRVLKKKKLKINVHRPVGTRVVFDDEGNTLPPLARIADTQSGKEALLLDPEQKAEYYKRMRDDLKKADKEDKIIERQRLREKRIKQKMKWK 2022 +K K+K RKQ R++E EEI+LL WI+ Q PDSG NP+SL PL K S +G+ +D +SRYAG +F Q P+S KTK L+ AK+V TD+Q AA+PHALCGRDILGAA+TGSGKTLAF+IP+LEKL+RERW PEDGVG IIISPTRELA Q F VL VGK H FSAGLLIGGR+ V++EKERV+E+NIL+C PGRLLQHMDETPNF+C Q+Q+L+LDEADR+LDS FK +L+ IISQLPK RQTLLFSATQTK ++DLARLSL+DPEY+SVH E+VTATP+ L Q VM+VP+E+KLDMLWSFIK+HL S+ILVFLS+ KQVKFV EAF KL PGIPLK LHG+M QE+RM +YS+F E++SVLF TDV ARGLDF+KAVDWVVQVDCPE+VASYIHRVGRTAR+ + GKS+LFL PSE +M+EKL+ AKVP+ K ++LQ VS LLA+LLVKYPDLQ AQRAFITY+RSIH ++DK+IFDV KL + +SASLGLPMTP+IRF N K K K V SI +E E++ + V + + E++E + F L + KS++ EE+ IPG RVLK KKLKIN+HRP G+RVV D+EGN+L PLA +A ++G E + LD E+ +YYK++ +++KAD EDK ++++R REKR+KQK+K K Sbjct: 2 VKIKKTKGMRKQIRLNEVEEINLLKQWIESQKPDSGFNPLSLRPLPKDSKIGKSEDGKNGTVFSRYAGVRKFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEKLHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDEADRVLDSAFKGQLDPIISQLPKHRQTLLFSATQTKKVKDLARLSLRDPEYISVHAEAVTATPTSLMQTVMIVPVEKKLDMLWSFIKTHLNSRILVFLSTKKQVKFVHEAFNKLRPGIPLKSLHGKMSQEKRMGVYSQFIERQSVLFCTDVLARGLDFDKAVDWVVQVDCPEDVASYIHRVGRTARFYTQGKSLLFLTPSEEKMIEKLQEAKVPIKLIKANNQKLQEVSRLLAALLVKYPDLQGVAQRAFITYLRSIHKRRDKEIFDVSKLSIENFSASLGLPMTPRIRFTNLKTKKKGVYESSIAMEIENAQEYEAPLVVKKDL-----LGEDLEEEDFALKPRKEGKVVEKSTKEEEVLIPGNRVLKNKKLKINLHRPFGSRVVLDEEGNSLAPLASVA-AEAGTE-VALDEERMNDYYKKVGAEMRKADIEDKKVDKERRREKRMKQKIKRK 673
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: RH32_ORYSJ (DEAD-box ATP-dependent RNA helicase 32 OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0517000 PE=2 SV=2) HSP 1 Score: 702.975 bits (1813), Expect = 0.000e+0 Identity = 383/758 (50.53%), Postives = 518/758 (68.34%), Query Frame = 1 Query: 1 MKRPKSKEFRKQQRVSEQEEIDLLNSWIQFQPPDSGS--------------NPMSLPPLTKSSPVGRLQDNTYSRYAGASRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQ-VLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQMLEKLKAA--KVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNE---YSASLGLPMTPKIRFLNQXXXXXXXXXXXXLVE-PEDSSKKNVLEVS----RNKIDTDPFKD--------------EEIENDLF-QLADPATNEDKVKSSEIEEIIPGTRVLKKKKLKINVHRPVGTRVVFDDEGNTLPPLARIADTQSGKEALLLDPEQKAEYYKRMRDDLKKADKEDKIIERQRLREKRIKQKMKWKAXXXXXXXXXXXXXXXXXXXTVKRRHKKNKV-YFDSDSDEGERN 2151 M+RP+S+ KQ R+ E +EI LL +WI P G+ + + V + Y +RF++ PLS KTKD LR+A + ++IQRAALPHALCGRD+LGAAKTGSGKTLAF+IPVLEKLYRERWGPEDGVG I++SP ++LAGQIF+V + VGK H FSA ++G RK ++ EK +N +NIL+CTPGRLLQHM ET NFDCSQ+Q +LV+DEAD++LD F+++++ ++SQLPK RQTLLFSATQTKS++DLAR+SLKDPEY+SVHEE+ TATP L+Q M+VPLEQKL+MLWSFIK HL+S+ILVFLSS KQVKFV+E FKKL PGI L+C+HGRMK E + AI +EF E SVLFSTD+ ARGLD VDWVVQVDCPEN+A YIHRVGRTARY GK+++FL P E +MLEKLKAA K+P+H KP E+LQ +S +AS+LV+YP+LQ +RAF+TY++S++LQ DK++FD+ + + Y+ASLGLP+TPKIRF++ K I V+ + SSK V+E++ N I+ D D + +++ L+ +++ TN + K +++ G + +KKKKLKINVHRP+GTRV FDDEG+T+PP A IA+ + ++D ++ ++ Y M ++++ DKEDK +E +R+ ++ QK EE D + + +R K K YF+SD +EG ++ Sbjct: 1 MRRPRSRGAAKQTRLREADEIRLLEAWIDAGKPARGTRPPPLSKSSSSPADTAAAKRGAKGAGGVPSKAAGEHPEYGACARFDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEKLYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLHGFSAACIVGNRKGLDEEKAVINNMNILVCTPGRLLQHMGETTNFDCSQIQQILVIDEADQVLDKNFQEQVDNVVSQLPKVRQTLLFSATQTKSVKDLARVSLKDPEYISVHEEATTATPDTLEQYAMIVPLEQKLNMLWSFIKRHLKSRILVFLSSVKQVKFVYEVFKKLRPGISLRCMHGRMKYEVQQAIVAEFKEGHSVLFSTDIFARGLDIED-VDWVVQVDCPENIALYIHRVGRTARYNKRGKALIFLCPEEEKMLEKLKAAESKIPIHIKKPNTEQLQQISQNIASVLVQYPNLQQLGKRAFVTYLKSVYLQSDKEVFDLSRFSMENFAAYAASLGLPVTPKIRFVSHKKNVPKKYMGDIDVKRMKRSSKPEVIEINPQAKSNLIEDDGDYDILYPKEQQTDVNMADGLDDVLYPKVSTADTNNEPEKVTQL-----GNKSVKKKKLKINVHRPLGTRVKFDDEGHTIPPFASIAEEVGSGD--VIDKDKISQRYAEMLREMQEHDKEDK-LEHKRILREKKLQKKLKLKRKRNEEMDAGSENSGSESDRDQRTASKGKKRYFNSDDEEGSKD 749
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DDX10_DICDI (Probable ATP-dependent RNA helicase ddx10 OS=Dictyostelium discoideum OX=44689 GN=ddx10 PE=3 SV=1) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 264/451 (58.54%), Postives = 356/451 (78.94%), Query Frame = 1 Query: 184 YAGASRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRS-VLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRF 1530 Y A+ F+ P+S+ T AL ++KF+ TDIQRA+LPH LCGRDILGAAKTGSGKTL+FI+P+LE L+R RWG +DG+G+I++SPTRELA QIFDVLK VGK+H FSAGL+IGGR +V+ EK+++N +NILI TPGRLLQHMDET FDCS +++LVLDEADRILD GF K LN+I+ LP+ RQTLLFSATQTKSI+DLARLSL++PEY+SV+E+ +T TP L Q + V+PLE KL+ML+SFIK+HL SKI+VF +SCKQV+F E FK L+PG L LHG+MKQ R+ ++ +FC+K++ LF+TD+AARGLDF AV+WV+QVDCP+++ +YIHRVGRTAR + G+S+ LLPSE M+ ++ K+ +P E+L + + L+S L + DL++ AQ++F++Y+RS++ Q +K+IF + +L +NE+S SLGL TP I+F Sbjct: 137 YPSATDFKDLPISQLTLKALTESKFLKLTDIQRASLPHTLCGRDILGAAKTGSGKTLSFILPILETLWRNRWGRDDGIGAIVLSPTRELAIQIFDVLKAVGKYHTFSAGLIIGGR-NVQQEKDKINAMNILIATPGRLLQHMDETYGFDCSNLKILVLDEADRILDLGFSKCLNSIVENLPRERQTLLFSATQTKSIRDLARLSLQEPEYISVYEKDITTTPQNLTQTLCVIPLEMKLNMLFSFIKTHLTSKIIVFFASCKQVRFAHETFKLLNPGTTLFPLHGKMKQWTRLEVFEDFCKKKAGTLFATDIAARGLDF-PAVEWVIQVDCPDDIETYIHRVGRTARNDAPGQSITILLPSEKDGMVNLMEKQKMKFEILEPNPEKLVSIDSKLSSFLSEKTDLKYLAQKSFVSYLRSVYRQSNKEIFKIQELNINEFSKSLGLLGTPNIQF 585
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DDX10_HUMAN (Probable ATP-dependent RNA helicase DDX10 OS=Homo sapiens OX=9606 GN=DDX10 PE=1 SV=2) HSP 1 Score: 551.977 bits (1421), Expect = 0.000e+0 Identity = 260/449 (57.91%), Postives = 352/449 (78.40%), Query Frame = 1 Query: 196 SRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKR-SVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQMLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFLNQ 1539 +RF FPLSKKT L++A++ + T+IQ+ + AL G+D+LGAAKTGSGKTLAF++PVLE LYR +W DG+G +IISPTRELA Q F+VL+ VGK+H+FSAGL+IGG KD++ E ER+N +NIL+CTPGRLLQHMDET +F + +Q+LVLDEADRILD GF +NA+I LPK+RQTLLFSATQTKS++DLARLSLK+PEY+ VHE++ +TP+ L+Q +V L+QK+ +L+SF++SHL+ K +VF SSCK+V++++ F +L PG+ + LHGR +Q RRM +Y+EF KR +VLF+TD+AARGLDF AV+WV+Q DCPE+ +YIHR GRTARYK DG+++L LLPSE M+++L KVPV K E+L V L S+L + DL+ RAQR F++Y+RS++L KDK++FDV KLP+ EY+ SLGL + P++RFL + Sbjct: 69 TRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGG-KDLKHEAERINNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLKNPEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQDLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRVRFLQK 515
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DBP4_COCIM (ATP-dependent RNA helicase DBP4 OS=Coccidioides immitis (strain RS) OX=246410 GN=DBP4 PE=3 SV=1) HSP 1 Score: 549.666 bits (1415), Expect = 0.000e+0 Identity = 259/449 (57.68%), Postives = 348/449 (77.51%), Query Frame = 1 Query: 193 ASRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCE-KRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFL 1533 A F + PLS T L + F TDIQ A+PHA+ GRDILGAAKTGSGKTLAF++PVLE LYR++W DG+G++I+SPTRELA QIF+VL+ +G++H FSAGL+IGG K ++ E+ER+ +NIL+CTPGR+LQHMD+T FD + +Q+LVLDEADRI+D GF+ ++AI+ LPK RQT+LFSATQTK + DLARLSL+DPEY+SVHE + +ATP+ L+Q +V PL +KLD LWSFI++ L+SKILVF SS KQV+FV+EAF+ + PGIPL LHGR KQ R+ I S+F K S LFSTDVAARGLDF AVDWV+Q+DCPE+ +YIHRVGRTARY+ DG++VLFL PSE + ML++L+ K+P+ + ++ Q + L ++ K P L++ Q+AF +Y++S+H+QKDKD+F+V LP+ E+++SLGLP P+I+F+ Sbjct: 47 AESFSELPLSDATLQGLSASHFKTLTDIQSRAVPHAIKGRDILGAAKTGSGKTLAFLVPVLENLYRKQWTEYDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGG-KSLQEEQERLGRMNILVCTPGRMLQHMDQTAAFDTAHIQMLVLDEADRIMDMGFQSTVDAIVEHLPKERQTMLFSATQTKKVSDLARLSLRDPEYISVHEAASSATPASLQQHYVVTPLPEKLDTLWSFIRNTLKSKILVFFSSSKQVRFVYEAFRHMQPGIPLLHLHGRQKQSARIDITSKFSRAKYSCLFSTDVAARGLDF-PAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEEGMLKRLEQKKIPIERINIKAKKQQSIMNQLQNMCFKDPALKYLGQKAFTSYVKSVHIQKDKDVFNVKSLPLEEFASSLGLPGAPRIKFI 493
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DDX10_MOUSE (Probable ATP-dependent RNA helicase DDX10 OS=Mus musculus OX=10090 GN=Ddx10 PE=1 SV=2) HSP 1 Score: 548.125 bits (1411), Expect = 0.000e+0 Identity = 263/450 (58.44%), Postives = 350/450 (77.78%), Query Frame = 1 Query: 196 SRFEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKR-SVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFLNQ 1539 +RF FPLSKKT L++A++ + T+IQ+ + AL G+D+LGAAKTGSGKTLAF++PVLE LYR +W DG+G +IISPTRELA Q F+VL+ VGK+H+FSAGL+IGG KD++ E ER+N +NIL+CTPGRLLQHMDET F + +Q+LVLDEADRILD GF +NAII LPK+RQTLLFSATQTKS++DLARLSLKDPEY+ VHE++ +TP+ L+Q ++ L QK+ +L+SF++SHL+ K +VF SSCK+V++++ F +L PGI + LHGR +Q RRM +Y+EF KR +VLF+TD+AARGLDF AV+WV+Q DCPE+ +YIHR GRTARYK DG+++L LLPSE Q M+++L KVPV K E+L V L S L + DL+ RAQR F++Y+RS++L KDK++F+V KLP+ EY+ SLGL + P+IRFL + Sbjct: 69 TRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGG-KDLKHEAERINNINILVCTPGRLLQHMDETICFHATNLQMLVLDEADRILDMGFADTMNAIIENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKYSTPATLEQNYIICELHQKISVLFSFLRSHLKKKSIVFFSSCKEVQYLYRVFCRLRPGISILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDF-PAVNWVLQFDCPEDANTYIHRAGRTARYKEDGEALLILLPSEEQGMVQQLLQKKVPVKEIKINPEKLIDVQKKLESFLAQDQDLKERAQRCFVSYIRSVYLMKDKEVFNVSKLPITEYALSLGLAVAPRIRFLQK 516
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DBP4_ASPTN (ATP-dependent RNA helicase dbp4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dbp4 PE=3 SV=2) HSP 1 Score: 546.584 bits (1407), Expect = 0.000e+0 Identity = 261/446 (58.52%), Postives = 351/446 (78.70%), Query Frame = 1 Query: 202 FEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCE-KRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFL 1533 F PLS+ T L + + TDIQ A+ HAL GRDILGAAKTGSGKTLAF+IPVLE LYR++W DG+G++I+SPTRELA QIF+VL+ VG++H+FSAGL+IGG K ++ E+ER+ ++NIL+CTPGR+LQH+D+T FD +Q+LVLDEADRI+D GF+K ++AII LPK RQT+LFSATQTK + DLARLSL+DPEY++VHE + +ATPS L+Q +V PL QKLD+LWSFI+S+L+SK +VFLSS KQV+FV+EAF+ L PGIPL LHGR KQ R+ I +++ + K +VLFSTDVAARGLDF AVDWV+Q+DCPE+ +YIHRVGRTARY+ DG++VLFL PSE Q ML++L+ KVPV + + Q + L ++ K P+L++ Q+AFI+Y++S+++QKDK+IF + L + E+++SLGLP P+I+F+ Sbjct: 48 FTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGSGKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRYHHFSAGLVIGG-KSLKEEQERLGKMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRIMDMGFQKTVDAIIGHLPKERQTMLFSATQTKKVSDLARLSLQDPEYVAVHEAAASATPSTLQQHYVVTPLPQKLDILWSFIRSNLKSKTIVFLSSGKQVRFVYEAFRHLQPGIPLMHLHGRQKQGGRLDITTKYSQAKHAVLFSTDVAARGLDF-PAVDWVIQLDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEEQGMLKRLEQKKVPVEKINVKANKQQSIKNQLQNMCFKDPELKYLGQKAFISYVKSVYVQKDKEIFKLKDLDLEEFASSLGLPGAPRIKFI 491
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DBP4_ASPOR (ATP-dependent RNA helicase dbp4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=dbp4 PE=3 SV=1) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 305/656 (46.49%), Postives = 424/656 (64.63%), Query Frame = 1 Query: 202 FEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCE-KRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFL---NQXXXXXXXXXXXXLVEPEDS-------SKKNVLEVSRNKID-------TDPFKDE--EIENDLFQLADP------------------------ATNEDKVKSSEIEEIIPGTRVLK---KKKLKINVHR---------------PVGTRVVFDDEGNTLPPLARIADTQSGKEALLLDPEQKAEYYKRMRDDLKKADKEDKIIERQ 1980 F PLS+ T L + F TDIQ A+ HAL GRDILGAAKTGSGKTLAF+IPVLE LYR++W DG+G++I+SPTRELA QIF+VL+ +G++H FSAGL+IGG K ++ E+ER+ +NIL+CTPGR+LQH+D+T FD +Q+LVLDEADRILD GF+K ++AI+ LPK RQTLLFSATQTK + DLARLSL+DPEY++VHE + +ATPS L+Q +V PL QKLD+LWSFI+S+L++K +VFLSS KQV+FV+E+F+ L PGIPL LHGR KQ R+ I ++F + K +VLFSTD+ ARGLDF AVDWV+Q+DCPE+ +YIHRVGRTARY+ DG++VLFL PSE ML++L+ KVP+ + + Q + L ++ K P+L++ Q+AFI+Y++S+++QKDK++F + +L + ++++SLGLP P+I+F+ + K + + L +DS SKK+ +V R K D D D ++ ND L DP A +ED +SE E G +V++ K L I+ R GT++++DDEGN L + D + K A EQ+A + + + AD EDK + +Q Sbjct: 47 FSDLPLSEPTASGLASSHFKTLTDIQSRAIGHALKGRDILGAAKTGSGKTLAFLIPVLENLYRKQWSEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLIIGG-KSLKEEQERLGRMNILVCTPGRMLQHLDQTAMFDVFNLQMLVLDEADRILDMGFQKTVDAIVGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSTLQQHYVVTPLSQKLDVLWSFIRSNLKAKTIVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRLDITAKFSQAKHAVLFSTDITARGLDF-PAVDWVIQMDCPEDADTYIHRVGRTARYERDGRAVLFLDPSEESGMLKRLEQKKVPIERINIKANKQQSIRDQLQNMCFKDPELKYLGQKAFISYVKSVYVQKDKEVFKLKELKLEDFASSLGLPGAPRIKFIKGDDTKERKNASRATAYLSSDDDSDEGGEKKSKKDEKQV-RTKYDRMFERRNQDVLADHYSKLINDDGTLVDPSKTASAADDADEDDDFLSVKRRFDAGDEDLGGNSEEELEQKGVKVVQLDGKDTLVIDSKRREKLLKSKKKLLKFKGKGTKLIYDDEGNA-HELYEMEDEEDFK-ARGDAKEQQARFLAEETERTRTADMEDKEVAKQ 697
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DBP4_ASPFU (ATP-dependent RNA helicase dbp4 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=dbp4 PE=3 SV=1) HSP 1 Score: 540.036 bits (1390), Expect = 0.000e+0 Identity = 257/446 (57.62%), Postives = 349/446 (78.25%), Query Frame = 1 Query: 202 FEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCE-KRSVLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQ-MLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRFL 1533 F PLS+ T L + + TDIQ A+ HAL GRDILGAAKTGSGKTLAF++PVLE LYR++W DG+G++I+SPTRELA QIF+VL+ +G++H FSAGL+IGG K ++ E+ER+ +NIL+CTPGR+LQH+D+T FD +Q+LVLDEADRILD GF++ ++AII LPK RQTLLFSATQTK + DLARLSL+DPEY++VHE + +ATPS L+Q ++ PL QKLD+LWSFI+S+L+SK +VFLSS KQV+FV+E+F+ L PGIPL LHGR KQ R+ I + F + K VLFSTDVAARGLDF AVDWV+Q+DCPE+ +YIHRVGRTARY+ +G++VLFL PSE + ML++L+ KVP+ + + Q + L ++ K P+L++ Q+AFI+Y++S+++QKDK+IF + +L ++E++ASLGLP P+I+F+ Sbjct: 49 FSDLPLSEPTASGLASSHYKTLTDIQSRAISHALKGRDILGAAKTGSGKTLAFLVPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKIGRYHTFSAGLVIGG-KSLKEEQERLGRMNILVCTPGRMLQHLDQTALFDTYNLQMLVLDEADRILDLGFQQTVDAIIGHLPKERQTLLFSATQTKKVSDLARLSLQDPEYVAVHETASSATPSKLQQHYVITPLPQKLDILWSFIRSNLKSKTMVFLSSGKQVRFVYESFRHLQPGIPLMHLHGRQKQGGRLDIVTRFSQSKHCVLFSTDVAARGLDF-PAVDWVIQLDCPEDADTYIHRVGRTARYEREGRAVLFLDPSEEEGMLKRLEQKKVPIEKINIKANKQQSIKDQLQNMCFKDPELKYLGQKAFISYVKSVYIQKDKEIFKLKELKLDEFAASLGLPGAPRIKFI 492
BLAST of Vigun08g198900.1 vs. DB:Swiss
Match: DBP4_SCHPO (ATP-dependent RNA helicase dbp4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=dbp4 PE=1 SV=1) HSP 1 Score: 536.954 bits (1382), Expect = 1.813e-180 Identity = 296/641 (46.18%), Postives = 422/641 (65.83%), Query Frame = 1 Query: 202 FEQFPLSKKTKDALRQAKFVVTTDIQRAALPHALCGRDILGAAKTGSGKTLAFIIPVLEKLYRERWGPEDGVGSIIISPTRELAGQIFDVLKDVGKHHNFSAGLLIGGRKDVEMEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSGFKKELNAIISQLPKRRQTLLFSATQTKSIQDLARLSLKDPEYLSVHEESVTATPSLLKQIVMVVPLEQKLDMLWSFIKSHLQSKILVFLSSCKQVKFVFEAFKKLHPGIPLKCLHGRMKQERRMAIYSEFCEKRS-VLFSTDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSEMQMLEKLKAAKVPVHFTKPRQERLQPVSTLLASLLVKYPDLQHRAQRAFITYMRSIHLQKDKDIFDVMKLPVNEYSASLGLPMTPKIRF---LNQXXXXXXXXXXXXLVEPEDS-----SKKNV-----------------------LEVSRNKIDTDPFKDEEIENDLFQLADPATNEDKVKSSEIEEIIPGTRVLKKKKLKINVHRPVGTRVVFDDEGNTLPPLA-RIADT--QSGKEALLLDPEQKAEYYKRMRDDLKKADKEDKIIERQR-LREKRIKQKMK 2016 F + PL++ TK AL+ A F+ T+IQ+ +P AL GRDILGAAKTGSGKTLAFI+P++E LYR++W DG+G+++ISPTRELA Q F+ L +G+ H+FSAGL+IGG + + EKER++ +NIL+CTPGRLLQH+D+ NFD S +Q+L+LDEADRILD GF+ L+AI+S LP RQT+LFSATQTKS++DLARLSL++P+++SVHE ++TPS L Q + VPL +KLD+L+ FI++HL+ K +VFLSSCKQV+FV+E F+++ PGI L LHG+ KQ R + ++F R VLF TD+ ARGLDF AVDWV+Q+D PE+V +YIHRVGRTARY G ++L LLPSE L++L++ K+ V + + + L +L K D+++ Q+AFI+Y+RSI+LQKDKD+F + KLPV ++ SLGLP TPKI F N K ++ + L E+S +K+NV +EV+ ++ D D + + +++DL + T E +S+ +E + + KK LK ++ +V FDDEGN +P A DT ++G A L+ A + R L+KAD DK RQ+ L +KR +Q+++ Sbjct: 41 FAELPLTQPTKSALKNAHFITLTEIQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENLYRKKWTSLDGLGALVISPTRELAIQTFETLVKIGRLHSFSAGLIIGG-NNYKEEKERLSRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDEADRILDMGFRTTLDAIVSSLPVHRQTMLFSATQTKSVKDLARLSLQNPDFISVHENDTSSTPSNLNQFYLTVPLTEKLDILFGFIRTHLKFKTIVFLSSCKQVRFVYETFRRMRPGISLLHLHGKQKQTTRTEVTAKFTSSRHVVLFCTDIVARGLDF-PAVDWVIQLDAPEDVDTYIHRVGRTARYNRSGNALLLLLPSEEAFLKRLESKKIAVERINVKDGKKTSIRNQLQNLCFKDNDIKYIGQKAFISYLRSIYLQKDKDVFQLDKLPVEAFADSLGLPGTPKITFGKLKNHSQSQKDYNSSTSLDSSEESEVDVENKQNVRTKYDRIFERKNQDVLAAHRQRLVEVNSDEDDGDFLQVKRVDHDLPE----ETGERFNANSKRKEKMASS---KKAMLK---YKKSADKVYFDDEGNAIPFYAMNTEDTFQKAGDPAALI-----ASHLAEERKALEKADITDKETVRQKQLEKKRRRQELE 664 The following BLAST results are available for this feature:
BLAST of Vigun08g198900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g198900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g198900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g198900.1; organism=Vigna unguiculata; type=mRNA; length=2679bpback to top protein sequence of Vigun08g198900.1_Vu_IT97K-499-35_v1.1 >Vigun08g198900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g198900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g198900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=749bpback to top mRNA from alignment at Vu08:36413750..36418860+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g198900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g198900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g198900.1; organism=Vigna unguiculata; type=mRNA; length=5111bp; location=Sequence derived from: Vu08:36413750..36418860+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:36413750..36418860+ >Vigun08g198900.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g198900.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g198900.1; organism=Vigna unguiculata; type=CDS; length=2247bp; location=Sequence derived from: Vu08:36413750..36418860+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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