Vigun08g202300.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF3_TOBAC (Ethylene-responsive transcription factor 3 OS=Nicotiana tabacum OX=4097 GN=ERF3 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.917e-28 Identity = 117/212 (55.19%), Postives = 127/212 (59.91%), Query Frame = 1 Query: 73 KEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPL----SHPFCYPH-PTTSPLFYAGFNDTNHTSNVNNPQRPTSSGMSSTVESFSGPRPPIAAAAGTSAXXXXXXXX-----------XXXXXXXXXXEDCHXXXXXXXXXXXXXXXXXXXXXFRPPLPFDLNAPPFXXXXXXXXLRCTALCL 660
KE R+RGVRKRPWGRFAAEIRDP KK RVWLGTFDSAE+AARAYDAAAR LRGPKAKTNFPL H F H P P + F + N QRPTSS MSSTVESFSGPRPP A T+A+ T + + DC D+ +DNI SSSFR PL FDLN PP D A DDL CTALCL
Sbjct: 24 KEIRFRGVRKRPWGRFAAEIRDPWKKTRVWLGTFDSAEDAARAYDAAARALRGPKAKTNFPLPYAHHHQFNQGHNPNNDPFVDSRFYPQD---NPIISQRPTSSSMSSTVESFSGPRPPPAPRQQTTASSRKYTRSPPVVPDDCHSDCDSSSSVVDHGDCE-------KENDNDNDNIASSSFRKPLLFDLNLPPPMDDAGADDLHCTALCL 225
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF82_ARATH (Ethylene-responsive transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=ERF3 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 2.812e-28 Identity = 91/156 (58.33%), Postives = 99/156 (63.46%), Query Frame = 1 Query: 1 MRKGRGGXXXXXXXXXXXXNGSLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPLSHPFC-------YPHPTTSPLFYAGFND----TNHTSNVNNPQRPTSSGMSSTVESFSGPRPPIAAAAGT 435
MR+GRG +A AA NGS+ KE R+RGVRKRPWGRFAAEIRDP KKARVWLGTFDSAEEAARAYD+AAR LRGPKAKTNFP+ + F D T+H RPTSS MSSTVESFSGPRP A T
Sbjct: 1 MRRGRGSSAVAGPTVVAAINGSV-KEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNFPIDSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVNRPTSSSMSSTVESFSGPRPTTMKPATT 155
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF83_ARATH (Ethylene-responsive transcription factor 7 OS=Arabidopsis thaliana OX=3702 GN=ERF7 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 5.538e-27 Identity = 87/167 (52.10%), Postives = 95/167 (56.89%), Query Frame = 1 Query: 1 MRKGRGGXXXXXXXXXXXXNGSLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPLSHPFCYPHPTTSPLFYAGFNDTNHTSNVNNP------------------------------QRPTSSGMSSTVESFSGPRP 411
MRKGRG + A G +KEPRYRGVRKRPWGRFAAEIRDPLKK+RVWLGTFDSA +AARAYD AAR LRGPKAKTNFP+ C P PL Y H N+ +P RP SS MSSTV+S SGPRP
Sbjct: 1 MRKGRGSSVVGPALPVTA--GGSVKEPRYRGVRKRPWGRFAAEIRDPLKKSRVWLGTFDSAVDAARAYDTAARNLRGPKAKTNFPID---CSPSSPLQPLTYL------HNQNLCSPPVIQNQIDPFMDHRLYGGGNFQEQQQQQIISRPASSSMSSTVKSCSGPRP 156
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF4_NICSY (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.699e-20 Identity = 52/63 (82.54%), Postives = 57/63 (90.48%), Query Frame = 1 Query: 70 LKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPL 258
+KE YRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAA+AYD AAR RGPKAKTNFPL
Sbjct: 22 VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFPL 84
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF4_TOBAC (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.848e-19 Identity = 51/62 (82.26%), Postives = 56/62 (90.32%), Query Frame = 1 Query: 70 LKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFP 255
+KE YRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAA+AYD AAR RGPKAKTNFP
Sbjct: 22 VKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNFP 83
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF78_ARATH (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.814e-19 Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 1 Query: 73 KEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFP 255
KE RYRGVRKRPWGR+AAEIRDP KK RVWLGTFD+AEEAARAYD AAR RG KAKTNFP
Sbjct: 21 KEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFP 81
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF80_ARATH (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.461e-18 Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 1 Query: 64 SLLKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPL 258
++ KE +RGVRKRPWGR+AAEIRDP KK RVWLGTFD+AEEAARAYD AAR RG KAKTNFPL
Sbjct: 26 TMRKEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNFPL 90
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana OX=3702 GN=ERF11 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.149e-18 Identity = 49/65 (75.38%), Postives = 52/65 (80.00%), Query Frame = 1 Query: 82 RYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFPLSHPFCY 276
RYRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+ EEAARAYD A RG KAKTNFP CY
Sbjct: 19 RYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP-----CY 78
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF79_ARATH (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.933e-18 Identity = 50/60 (83.33%), Postives = 55/60 (91.67%), Query Frame = 1 Query: 73 KEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNF 252
KE RYRGVRKRPWGR+AAEIRDP+KK RVWLGTFD+A++AARAYDAAAR RG KAKTNF
Sbjct: 27 KEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTNF 86
BLAST of Vigun08g202300.1 vs. DB:Swiss
Match: ERF81_ARATH (Ethylene-responsive transcription factor 12 OS=Arabidopsis thaliana OX=3702 GN=ERF12 PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.983e-18 Identity = 49/61 (80.33%), Postives = 52/61 (85.25%), Query Frame = 1 Query: 73 KEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFDSXXXXXXXXXXXXXTLRGPKAKTNFP 255
+E YRGVRKRPWGR+AAEIRDP KK RVWLGTFD+ EEAA AYD AAR LRG KAKTNFP
Sbjct: 8 REVHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARFLRGIKAKTNFP 68 The following BLAST results are available for this feature:
BLAST of Vigun08g202300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g202300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g202300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g202300.1; organism=Vigna unguiculata; type=mRNA; length=1569bpback to top protein sequence of Vigun08g202300.1_Vu_IT97K-499-35_v1.1 >Vigun08g202300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g202300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g202300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=221bpback to top mRNA from alignment at Vu08:36646387..36647955+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g202300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g202300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g202300.1; organism=Vigna unguiculata; type=mRNA; length=1569bp; location=Sequence derived from: Vu08:36646387..36647955+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:36646387..36647955+ >Vigun08g202300.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g202300.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g202300.1; organism=Vigna unguiculata; type=CDS; length=663bp; location=Sequence derived from: Vu08:36646387..36647955+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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