Vigun08g211200.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH1_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana OX=3702 GN=SFH1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.529e-17 Identity = 73/245 (29.80%), Postives = 111/245 (45.31%), Query Frame = 1 Query: 55 LDEQQKNTFQNMHQGYPTETLVRFLKARDGNVVKAHKMLIDCLQWRVE------------NEIDNVLAKPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
LDE + ++H ++RFL+AR ++ KA +M D +QWR + EID V+ K P G G KEG PV + +G ++T D YV+ H++ E +V P + +HID +LD+ GLK + + +LL + ID+ NYPE + +I+N F W VK L +T K+HVL +LL+V+D + LP F
Sbjct: 75 LDELLPSKLDDLH------MMLRFLRARKFDIEKAKQMWSDMIQWRKDFGADTIIEDFDFEEIDEVM-KHYPQGYH------------GVDKEGRPVYIERLGQIDANKLLQVTTMDR-----YVKYHVKEFEKTFKVKFPSCSVAANKHIDQSTTILDVQGVGLKNFSKSARELLQRLCKIDNENYPETLNRMFIINAGSGFRLLWSTVKSFLDPKTTAKIHVLGNKYHSKLLEVIDASELPEF 295
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH2_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana OX=3702 GN=SFH2 PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 9.893e-17 Identity = 66/218 (30.28%), Postives = 98/218 (44.95%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLV-----GMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFL+AR ++ KA +M D L WR E D ++ F ++V G G KEG P+ + +G ++T D YV+ H++ E V P + RHID +LD+ GL LL +I ID+ NYPE + +I+N F W VK L +T K+HVL +LL+++D LP F
Sbjct: 97 MLRFLRARKFDLEKAKQMWSDMLNWRKEYGADTIMED------FDFKEIEEVVKYYPQGYHGVDKEGRPIYIERLGQVDATKLMKVTTIDR-----YVKYHVKEFEKTFNVKFPACSIAAKRHIDQSTTILDVQGVGLSNFNKAAKDLLQSIQKIDNDNYPETLNRMFIINAGCGFRLLWNTVKSFLDPKTTAKIHVLGNKYQTKLLEIIDANELPEF 303
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH8_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH8 OS=Arabidopsis thaliana OX=3702 GN=SFH8 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.012e-16 Identity = 66/213 (30.99%), Postives = 100/213 (46.95%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFLKAR +V KA +M D +QWR E D ++ + L+ G KEG P+ + +G +++ D YV+ H++ E + P T + RHID+ +LD+ GLK + L+T + ID NYPE +I+N F W VK L +T K+HVL + +LL+V+D LP F
Sbjct: 111 MLRFLKARKFDVEKAKQMWADMIQWRKEFGTDTIIQDFDFEEINEVLKHYPQC-YHGVDKEGRPIYIERLGKVDPNRLMQVTSMDR-----YVRYHVKEFERSFMIKFPSCTISAKRHIDSSTTILDVQGVGLKNFNKSARDLITRLQKIDGDNYPETLHQMFIINAGPGFRLLWNTVKSFLDPKTSAKIHVLGYKYLSKLLEVIDVNELPEF 317
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH3_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana OX=3702 GN=SFH3 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.902e-16 Identity = 65/217 (29.95%), Postives = 100/217 (46.08%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLA----KPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFL+AR ++ KA +M D + WR E +D ++ K I L + G G K+G PV + +G ++T D YV+ H++ E + +P + +HID +LD+ GLK + LL I ID NYPE + +I+N F W VK L +T K+HVL +LL+++D LP F
Sbjct: 96 MLRFLRARKFDLEKAKQMWTDMIHWRKEFGVDTIMEDFDFKEIDEVLKYYPQ-----GYHGVDKDGRPVYIERLGQVDATKLMQVTTIDR-----YVKYHVREFEKTFNIKLPACSIAAKKHIDQSTTILDVQGVGLKSFSKAARDLLQRIQKIDSDNYPETLNRMFIINAGSGFRLLWSTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDSNELPEF 302
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH10_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana OX=3702 GN=SFH10 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.919e-16 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLV----GMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFLKAR ++ K ++M D L+WR E D V+ F+ + D L G G KEG PV + +G ++T D YV H+ E V P + +HID +LD+ GLK L+T + +D NYPE + +I+N F W VK L +T K+HVL +LL+++D + LP F
Sbjct: 82 MLRFLKARKFDLEKTNQMWSDMLRWRKEFGADTVMED----FEFKEI-DEVLKYYPQGHHGVDKEGRPVYIERLGQVDSTKLMQVTTMDR-----YVNYHVMEFERTFNVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEF 288
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH12_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH12 OS=Arabidopsis thaliana OX=3702 GN=SFH12 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 4.411e-16 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLV----GMSGFTKEGLPVIVIGVGL---------STFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFLKAR ++ K +M + L+WR E D V+ + F+ + D L G G KEG PV + +GL +T D YV H+ E V P + +HID +LD+ GLK L+T + +D NYPE + +I+N F W VK L +T K+HVL +LL+++D + LP F
Sbjct: 79 MLRFLKARKFDLEKTKQMWTEMLRWRKEFGADTVMEE----FDFKEI-DEVLKYYPQGHHGVDKEGRPVYIERLGLVDSTKLMQVTTMDR-----YVNYHVMEFERTFNVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNKAARDLITRLQKVDGDNYPETLNRMFIINAGSGFRMLWNTVKSFLDPKTTAKIHVLGNKYQSKLLEIIDESELPEF 285
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH6_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH6 OS=Arabidopsis thaliana OX=3702 GN=SFH6 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 1.121e-15 Identity = 70/226 (30.97%), Postives = 103/226 (45.58%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVE------------NEIDNVLAKPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVG---------LSTFDEGLDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGME-ELLKVMDYASLPHF 720
++RFLKAR ++ KA M D +QWR E EID VL K P G KEG PV + +G ++T D Y++ H++ E + P T ++ID+ +LD+ GLK + +L+T + ID NYPE +I+N F W VK L +T K+HVL GC + +LL+++D + LP F
Sbjct: 109 MLRFLKARKFDIEKAKHMWADMIQWRKEFGTDTIIQDFQFEEIDEVL-KYYPHGYH------------SVDKEGRPVYIERLGKVDPNKLMQVTTLDR-----YIRYHVKEFERSFMLKFPACTIAAKKYIDSSTTILDVQGVGLKNFTKSARELITRLQKIDGDNYPETLHQMFIINAGPGFRLLWSTVKSFLDPKTTSKIHVL-GCKYQSKLLEIIDSSELPEF 315
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH7_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH7 OS=Arabidopsis thaliana OX=3702 GN=SFH7 PE=2 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 2.454e-15 Identity = 61/213 (28.64%), Postives = 101/213 (47.42%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLV-----GMSGFTKEGLPVIVIGVGLSTFDEGLDK----YYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDM--TGXXXXXXXXXXXXTAITTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFL+AR + KA +M D LQWR++ +D ++ F Q++ G G KEG PV + +G ++ L Y + H++ E ++ P + +HID + D+ GLK + +LL + ID+ NYPE + +I+N F W +K L +T K+HVL +LL+ +D + LP+F
Sbjct: 89 MLRFLRARKFDKEKAKQMWSDMLQWRMDFGVDTIIED------FEFEEIDQVLKHYPQGYHGVDKEGRPVYIERLGQIDANKLLQATTMDRYEKYHVKEFEKMFKIKFPSCSAAAKKHIDQSTTIFDVQGVGLKNFNKSARELLQRLLKIDNDNYPETLNRMFIINAGPGFRLLWAPIKKFLDPKTTSKIHVLGNKYQPKLLEAIDASELPYF 295
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH9_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana OX=3702 GN=SFH9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.012e-15 Identity = 60/212 (28.30%), Postives = 101/212 (47.64%), Query Frame = 1 Query: 112 TLVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVGLSTFDEG-------LDKYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDMTGXXXXXXXXXXXXTAI--TTIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
T++RFLKAR ++ K +M + L+WR EN +D ++ + + ++ G G +EG PV + +G D G L+++ ++ H+Q E P + RHI++ ++D+ G+ + +L + ID NYPE + YI+N F W VK L +T K+HVL LL+++D + LP F
Sbjct: 103 TMLRFLKARRFDLEKTVQMWEEMLKWRKENGVDTIIQDFVYDE-YEEVQQYYPHGYHGVDREGRPVYIERLG--KIDPGKLMKVTTLERF-LRYHVQGFEKTFSEKFPACSIAAKRHINSSTTIIDVHGVSWMSFRKLAQDLVMRMQKIDGDNYPETLNQMYIINAGNGFKLVWNTVKGFLDPKTTSKIHVLGNKYRSHLLEIIDPSELPEF 310
BLAST of Vigun08g211200.1 vs. DB:Swiss
Match: SFH4_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH4 OS=Arabidopsis thaliana OX=3702 GN=SFH4 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.766e-15 Identity = 64/208 (30.77%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 115 LVRFLKARDGNVVKAHKMLIDCLQWRVENEIDNVLAKPIPPGLFRRLRDSQLVGMSGFTKEGLPVIVIGVGLSTFDEGLD----KYYVQLHIQMNEYRDRVIMPRATKNHGRHIDTCVKVLDMTGXXXXXXXXXXXXTAIT--TIDDLNYPEKTDAYYIVNVPYVFSACWKVVKPLLQERTRKKVHVLKGCGMEELLKVMDYASLPHF 720
++RFL AR ++ KA M + +QWR + D +L P L LR G G KEG PV + +G + + + Y++ H++ E V P RHID+ +LD+ GL L + I ID NYPE +I+N F W VK L +T K+HVL +LL+++D + LP F
Sbjct: 105 MLRFLFARKFDLGKAKLMWTNMIQWRRDFGTDTILEDFEFPELDEVLR-YYPQGYHGVDKEGRPVYIERLGKVDASKLMQVTTLERYLRYHVKEFEKTITVKFPACCIAAKRHIDSSTTILDVQGLGLKNFTKTARDLIIQLQKIDSDNYPETLHRMFIINAGSGFKLLWGTVKSFLDPKTVSKIHVLGNKYQNKLLEMIDASQLPDF 311 The following BLAST results are available for this feature:
BLAST of Vigun08g211200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211200.1; organism=Vigna unguiculata; type=mRNA; length=1858bpback to top protein sequence of Vigun08g211200.1_Vu_IT97K-499-35_v1.1 >Vigun08g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=324bpback to top mRNA from alignment at Vu08:37293990..37297956- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211200.1; organism=Vigna unguiculata; type=mRNA; length=3967bp; location=Sequence derived from: Vu08:37293990..37297956- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:37293990..37297956- >Vigun08g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun08g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun08g211200.1; organism=Vigna unguiculata; type=CDS; length=972bp; location=Sequence derived from: Vu08:37293990..37297956- (Vigna unguiculataback to top |