Vigun08g215100.2
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PFBS_ARATH (Phytochromobilin:ferredoxin oxidoreductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HY2 PE=2 SV=1) HSP 1 Score: 369.007 bits (946), Expect = 9.655e-127 Identity = 169/282 (59.93%), Postives = 220/282 (78.01%), Query Frame = 1 Query: 139 SVSYHKFVEFALDETRRHTHLTPSPLQDKFSSMNSKDGKGRLSMLSFEAAKIRLLRSLIIETETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQKYDILYSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFNGVDELGSKTFYDYFPHYCTQEGTLNKKGNIIGKSFENRPWDSRGEFIG 984
+VSY +F E AL+ETR+ L PS LQ+K+SSM DGK L ML+F+++KIRLLRS+ IE ETMQVFDF F E EYD PIFCANFFTS NIVVLDLNPLH + +Q +Y+DKY+ ++ + KY + FPWGGKLT ESIKFFSP+V+WT+F+S+ +K+ L+SAF +YY+ WLE+ + +E + S V N EAQH+YLTWR +KDPG G+LK+L+G+ AK+LL++FLFNGVDELG+KTF DYFP Y T++GT++ K +IIGKS+E RPWD G+FIG
Sbjct: 48 AVSYKEFAESALEETRKRIVLEPSHLQEKYSSMTGLDGKTELQMLAFKSSKIRLLRSMAIENETMQVFDFAGFMEPEYDTPIFCANFFTSTNVNIVVLDLNPLHQLTDQTDYQDKYYNKIMSIYHKYAETFPWGGKLTGESIKFFSPLVMWTRFSSSKEKHKALFSAFLEYYQAWLEMTIQVREEMEPSHVRANCEAQHKYLTWRAQKDPGHGLLKRLVGEAKAKELLRDFLFNGVDELGTKTFIDYFPEYQTEDGTVSDKRSIIGKSYETRPWDLTGQFIG 329
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_NOSP7 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=pebB PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 2.521e-38 Identity = 75/242 (30.99%), Postives = 131/242 (54.13%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHLTPSPLQDKFSSMNSKDGKGR------LSMLSFEAAKIRLLRSLIIET-ETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQKYDIL----YSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFN 840
Y F+++A+ R L P P+ F S ++ GKG+ + +F+ AK+R +R+ ++ ++QV +F +FP YD+P F A+ T +++ LD+ PL + Y+ KY + ++P+ + Q WGG E+ FFSP +WT+ PQ+ ++ ++AFKDY K +L+ + ++ TD +V +AQ RYL +R EKDP +G+ K+ G ++ + FLF+
Sbjct: 11 YQPFLDYAIAYMRSRLDLEPYPIPTGFESNSAVVGKGKNQEEVVTTSYAFQTAKLRQIRAAHVQGGNSLQVLNFVIFPHLNYDLPFFGADLVTLPGGHLIALDMQPL--FRDDSAYQAKYTEPILPIFHAHQQHLSWGGDFPEEAQPFFSPAFLWTR----PQETAVVETQVFAAFKDYLKAYLDFVEQAEAVTDSQNLVAIKQAQLRYLRYRAEKDPARGMFKRFYGAEWTEEYIHGFLFD 246
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_TRIEI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=pebB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 7.043e-32 Identity = 71/251 (28.29%), Postives = 130/251 (51.79%), Query Frame = 1 Query: 121 TCIQSLSVSYHKFVEFALDETRRHTHLTPSPLQDKFSSMNSKDGKGR----LSMLSFE--AAKIRLLRSLIIET-ETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQKYDIL----YSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFN 840
T ++ Y F+++AL + + L P P+ F + GKG+ + S+ + K+R +R+ ++ +QV +F +FP YD+P F A+ + +++ LD+ PL + +Y+ KY + + K+ + PWGG E+ FFSP +WT+ PQK +++ + AFKDY + +L + ++ + T+ ++ EAQ RYL +R EKDP + +L + G ++ + FLF+
Sbjct: 2 TATNNIVNLYQPFLDYALTKLKEELELQPYPIPSGFEHKVAMTGKGKKQQEVQTTSYAHCSPKLRQIRAAHVQGGSALQVLNFVIFPHLNYDLPFFGADLVSLPGGHLIALDMQPL--FRDNLQYQKKYTEPIWETFQKHQKYLPWGGDFPEEATPFFSPAFLWTR----PQKTELVETRVFEAFKDYLQAYLIFVKQTEQITNSEKLAEIKEAQLRYLRYRAEKDPARKMLTRFYGHEWTEEYIHGFLFD 246
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_GLOVI (Phycoerythrobilin:ferredoxin oxidoreductase OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=pebB PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 7.743e-28 Identity = 64/234 (27.35%), Postives = 115/234 (49.15%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHLTPSPLQDKFSSMNS-KDGKGRLSM-LSFEAAKIRLLRSLIIETE-TMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQKYDILYSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFN 840
Y F+E A R L P P+ F + G+ ++ ++++ K+R +R+ ++ +QV +F + P EYD+P F A+ T +++ LD+ PL + Y+ KY + ++PL + WGG E+ FFSP +WT+ +++AF DY +L+ + ++ T + AQ RYL +R EKDP +G+ ++ G ++ + FLF+
Sbjct: 4 YEPFLERAQQVLTRRLELAPYPIPVGFERKEALVRGEAVVTTSTAWQSPKLRQIRAAHVQGGGALQVLNFVISPRLEYDLPFFGADLVTLPGGHLIALDMQPL--FRDDPAYQAKYTEPIVPLFEAHRAHLEWGGDFPEEARPFFSPAFLWTRPKETGTVETRVFAAFVDYLNAYLDFVERAEPVTHPEGLAAVERAQLRYLHYRAEKDPARGMFRRFYGPEWTEEYIHGFLFD 235
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_PROM9 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain MIT 9312) OX=74546 GN=pebB PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 2.148e-24 Identity = 67/245 (27.35%), Postives = 125/245 (51.02%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHL---TPSPLQDKFSSMNSKDGKGRLSMLSF---EAAKIRLLRSLIIETETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQK----YDILYSAFKDYYKVWLELICKSVKETDESQVVLNLE-----AQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLF 837
+H F+++ ++ ++ L PS K S+ SK K +++ ++ +I+ R++ I + V +F + P Y+VP F +F + ++++VLD P I Q++Y ++ + LI L P K++++ +FFSP VIW+K + + LY++FK+Y ++LE++ +S QV LNL+ Q+ YL +R++ DP + +L L G + L+K LF
Sbjct: 15 WHNFLKYLVNNLSKYNCLEKKIPSEYSYKDSTYGSKKSKKNVNLSTWGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKI--QNQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLIANQLYTSFKEYLDLYLEILFES------QQVNLNLQKELINGQNNYLKYRIDNDPARPMLSSLFGKEFTESLIKEVLF 251
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_SYNPY (Phycoerythrobilin:ferredoxin oxidoreductase OS=Synechococcus sp. (strain WH8020) OX=32052 GN=pebB PE=3 SV=2) HSP 1 Score: 100.523 bits (249), Expect = 1.664e-23 Identity = 65/243 (26.75%), Postives = 115/243 (47.33%), Query Frame = 1 Query: 145 SYHKFVEFALDETRRHTHLTPSPLQDKFSSMNSKDGKGRLSM------LSFEAAKIRLLRSLIIET-ETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQKYDILYS----AFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFN 840
S+ F+E A+ ++ P P+ D+F + G S+ + + K R +R+ + V +F + P++ YD+P F + T +++ LDL P I + + LIP+ ++ P+GG + E+ FFSP +WT+ + +++ S AF DY ++LEL + + TDE VL L+ Q +Y +R EKDP +G+L + G + + LF+
Sbjct: 18 SWQPFLEDAIKRLE-GLNVEPYPVPDRFLQREDQTGSKSKSIPVTTATWACKTEKFRQVRAACVSAGSAASVLNFVINPKSTYDLPFFGGDLVTLPAGHLLALDLQPA--IKTDEVHTTHVWDRLIPIFERWRDQLPYGGPIPEEAQPFFSPGFLWTRLPLGEEGDELIQSIVRPAFNDYLDLYLELAASAERVTDERSEVL-LQGQRKYTDYRAEKDPARGMLTRFHGSEWTEAYIHTVLFD 256
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_PROM0 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain MIT 9301) OX=167546 GN=pebB PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.615e-22 Identity = 64/240 (26.67%), Postives = 121/240 (50.42%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHL---TPSPLQDKFSSMNSKDGKGRLSMLSF---EAAKIRLLRSLIIETETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQK----YDILYSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLF 837
+H F+++ + ++ L PS K S+ SK K +++ ++ +I+ R++ I + V +F + P Y+VP F +F + ++++VLD P I Q +Y ++ + LI L P K++++ +FFSP VIW+K + + LY++FK+Y ++LE++ +S + E Q L + Q+ YL +R + DP + +L L G + L++ LF
Sbjct: 15 WHNFLKYLTNNLSKYNCLEKKIPSEYSYKDSTYGSKKLKKNVNLSTWGVTHKKRIQFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSHLLVLDFQPSLKI--QKQYNNELLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNLELQKEL-INGQNEYLNYRRDNDPARPMLSSLFGKEFTESLIEEVLF 251
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_PROMA (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) OX=167539 GN=pebB PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 1.481e-21 Identity = 67/227 (29.52%), Postives = 115/227 (50.66%), Query Frame = 1 Query: 199 LTPSPLQDKFSSMNSKDGKGR----LSMLSFEA--AKIRLLRSLIIET-ETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQK----YDILYSAFKDYYKVWLEL--ICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLFN 840
+ P P+ F S S G R ++ L++ A KI+ +R I+ E++ VF+ + P +YD+P F A+F T +++ LDL P + N H + + LIPL + L P GG++ E+ +FSP +W++ + + +IL AF +Y +++EL I K +K+ ++ LE Q Y+ +R KDP + +L + G +D + LFN
Sbjct: 35 IEPYPVSHDFLSKESITGSRRNPVHVTTLTWAAKFEKIKQVRLACIKGGESLSVFNLLIHPLNDYDLPFFGADFVTLPNGHLLALDLQPALKLDNIH--TENVWPRLIPLHDHWQSLLPSGGEIPKEAEPYFSPGFLWSRLPLSKESDNIISEILRPAFGEYLSLYIELLHIAKPLKKERALKI---LEGQKAYINYRSTKDPARAMLCRFYGKEWTEDYIHKVLFN 256
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_PROMS (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=pebB PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.899e-21 Identity = 64/240 (26.67%), Postives = 118/240 (49.17%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHL---TPSPLQDKFSSMNSKDGKGRLSMLSF---EAAKIRLLRSLIIETETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQK----YDILYSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLF 837
+H F+++ + ++ L PS K S+ SK K +++ ++ +I+ R++ I + V +F + P Y+VP F +F + + ++VLD P I Q++Y + + LI L P K++++ +FFSP VIW+K + + LY++FK+Y ++LE++ +S + E Q L Q YL +R + DP + +L L G + L++ LF
Sbjct: 15 WHNFLKYLTNNLSKYNCLEKTIPSEYSYKDSTYGSKKSKKNVNLSTWGVTHKKRIKFARAVCINSPNYSVLNFLIIPNTIYNVPFFGVDFVSLPNSYLLVLDFQPSLKI--QNQYNNDLLEKLIKLKNHCHSSLPLAEKMSADVARFFSPGVIWSKLPKEERSDFLITNQLYTSFKEYLDLYLEILFESKEVNIELQKELT-NGQINYLNYRRDNDPARPMLSSLFGQEFTESLIEEVLF 251
BLAST of Vigun08g215100.2 vs. DB:Swiss
Match: PEBB_PROM2 (Phycoerythrobilin:ferredoxin oxidoreductase OS=Prochlorococcus marinus (strain MIT 9215) OX=93060 GN=pebB PE=3 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.966e-20 Identity = 62/240 (25.83%), Postives = 118/240 (49.17%), Query Frame = 1 Query: 148 YHKFVEFALDETRRHTHL---TPSPLQDKFSSMNSKDGKGRLSMLSF---EAAKIRLLRSLIIETETMQVFDFTVFPEAEYDVPIFCANFFTSAKTNIVVLDLNPLHDIINQHEYKDKYFKSLIPLGLKYTQLFPWGGKLTSESIKFFSPIVIWTKFTSNPQK----YDILYSAFKDYYKVWLELICKSVKETDESQVVLNLEAQHRYLTWRVEKDPGQGVLKKLIGDTLAKDLLKNFLF 837
+H F+++ + ++ L PS K S+ SK K +++ ++ +I+ R++ I + V +F + P Y+VP F +F + ++VLD P I Q++Y ++ + LI L P +++ + +FFSP IW+K + + LY++FK+Y ++LE++ +S + + Q L + Q+ YL +R + DP + +L L G + L+K LF
Sbjct: 15 WHIFLKYLTNNLSKYNCLEKIIPSEYSYKDSTYGSKKSKKNVNLCTWGVTHKKRIQFARAVCINSPKYSVLNFLIIPNTIYNVPFFGVDFVSLPNIYLLVLDFQPSLKI--QNQYNNQLLEKLIKLKNHCHSSLPLAEEMSVDVARFFSPGAIWSKLPKEERSDFLIANQLYTSFKEYLDLYLEILFESKEVNIDLQKEL-INGQNNYLNYRRDNDPARPMLSSLFGKEFTESLIKEVLF 251 The following BLAST results are available for this feature:
BLAST of Vigun08g215100.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun08g215100.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g215100.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g215100.2; organism=Vigna unguiculata; type=mRNA; length=1457bpback to top protein sequence of Vigun08g215100.2_Vu_IT97K-499-35_v1.1 >Vigun08g215100.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g215100.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g215100.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=330bpback to top mRNA from alignment at Vu08:37556701..37563018- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun08g215100.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g215100.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g215100.2; organism=Vigna unguiculata; type=mRNA; length=6318bp; location=Sequence derived from: Vu08:37556701..37563018- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu08:37556701..37563018- >Vigun08g215100.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g215100.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g215100.2; organism=Vigna unguiculata; type=CDS; length=990bp; location=Sequence derived from: Vu08:37556701..37563018- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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