Vigun08g218000.2

Transcript Overview
NameVigun08g218000.2
Unique NameVigun08g218000.2_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2595
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu08supercontigVu08:37785452..37790480 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
psvuL166Pisum sativum Cameor genome v1aPisum sativum
crvuL191Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL701Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL067Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL135Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0194Cicer arietinum ICC 4958 genome v2Cicer arietinum
ccvuL0218Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0195Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0636Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL691Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR570Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL088Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL081Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL447Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL829Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR398Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL128Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL598Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL138Cicer arietinum
ccavuL423Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR678Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR736Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL287Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL301Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL616Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR456Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
rna-TanjilR_00842Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vum_03G00078.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014649565.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
evm.model.Chr08.767.1.62113170Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
jg99.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
XM_058888994.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Hedin2.R1.1g285360.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_03303.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Cc_v2.0_12718.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_030224Cajanus cajan Asha genome v1.0Cajanus cajan
Vigan.03G010200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_07884Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.1g231200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_03188.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat02G0008100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr08.1794Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_19150Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
LR48_mrnaVigan07g004000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.03G006500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004491534.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Va07G001540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Phvul.008G286500.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_09790Cicer arietinum CDC Frontier genome v1.0Cicer arietinum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g218000.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun08g218000Vigun08g218000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g218000.2Vigun08g218000.2_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun08g218000.2_Vu_IT97K-499-35_v1.1Vigun08g218000.2_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g218000.2.v1.1.five_prime_UTR.1Vigun08g218000.2.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun08g218000.2.v1.1.five_prime_UTR.2Vigun08g218000.2.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun08g218000.2.v1.1.five_prime_UTR.3Vigun08g218000.2.v1.1.five_prime_UTR.3_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g218000.2.v1.1.CDS.1Vigun08g218000.2.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g218000.2.v1.1.CDS.2Vigun08g218000.2.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun08g218000.2.v1.1.CDS.3Vigun08g218000.2.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun08g218000.2.v1.1.three_prime_UTR.1Vigun08g218000.2.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: RNP1_ARATH (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.467e-72
Identity = 106/192 (55.21%), Postives = 151/192 (78.65%), Query Frame = 1 
Query:    1 MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSR----NSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 564
            M SD GKLF+GGISW+T+E++LRE+F+ YGEV +A++M+D+ TGR RGFGFV+FSDP+V + V++EKH+ID R V+ K+A+ R++Q +  R    N+    G     +T+KIFVGGL  T+T+ +F++YF+ +G +TDV +MYD  T RPRGFGF+++DSE+AVD VL KTFH+L+GK VEVKRA+PK+ +P
Sbjct:    1 MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRALPKDANP 192
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: DAZP1_XENLA (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 4.243e-57
Identity = 109/241 (45.23%), Postives = 145/241 (60.17%), Query Frame = 1 
Query:   16 GKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDP-AVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSR-NSGSIHGSPGP--GRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVP---KELSPGPSRTPLGGYNYGLSRVNSFLNGFT-------QGYSP--------STVGGY 672
            GKLF+GG+ W T +E LR YFS YGEVV+ VIMKD+TT ++RGFGFV F DP  V  ++    H +DGR ++ K   PR  Q   SR   G     P     R+ KIFVGG+     E++ K+YF++FG +T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P   K  +PGP     G   +G   + S  NG+T       QGYSP         T+GGY
Sbjct:   10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQTPGPP----GSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGY 246

HSP 2 Score: 71.2478 bits (173), Expect = 3.491e-12
Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 1 
Query:    7 SDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDP-AVAEIVIKEKHNIDGRMVEAKKAVPRDDQN 261
            S + K+F+GGI  +  E  L+EYF+ +G V E V++ D    R RGFGF+ F D  +V + V    H+I G+ VE K+A PRD ++
Sbjct:  111 SRSNKIFVGGIPHNCGETELKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKS 196
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: MSIR6_DROME (RNA-binding protein Musashi homolog Rbp6 OS=Drosophila melanogaster OX=7227 GN=Rbp6 PE=2 SV=3)

HSP 1 Score: 188.734 bits (478), Expect = 4.845e-54
Identity = 92/185 (49.73%), Postives = 124/185 (67.03%), Query Frame = 1 
Query:    7 SDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDP-AVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 558
            +D GK+FIGG+SW T+ E LR+YF  YG++ EA++MKD TT R+RGFGFV FSDP +V +++ +  H +DG+ V+ K A PR     +              RT+KIFVGGL++  T  D K YF+QFG I D ++M+D  T R RGFGF+T+ SE+ VDKV    FHE+N KMVE K+A PKE+
Sbjct:   26 NDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHPKMVT------------RTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKEV 198

HSP 2 Score: 77.0258 bits (188), Expect = 5.949e-14
Identity = 38/95 (40.00%), Postives = 56/95 (58.95%), Query Frame = 1 
Query:  280 GSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 564
            G    S  P    K+F+GGL+   +    + YF ++G I++ +VM D  T+R RGFGF+T+    +VDKVL +  HEL+GK V+ K A P+   P
Sbjct:   17 GPCSPSEVPNDPGKMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKVLTQGTHELDGKKVDPKVAFPRRAHP 111
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: DAZP1_HUMAN (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 2.131e-53
Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 1 
Query:   16 GKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDP-AVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGP--GRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVANGRSGF 726
            GKLF+GG+ W T +E LR YFS YGEVV+ VIMKD+TT ++RGFGFV F DP  V  ++    H +DGR ++ K   PR  Q   +R        P     ++ KIFVGG+     E++ ++YF +FG +T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++        P G   +G   V +  NG+     P+   GYG    G + P      G+
Sbjct:   10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKSQAPGQP-GASQWGSRVVPNAANGWAGQPPPTWQQGYG--PQGMWVPAGQAIGGY 246

HSP 2 Score: 73.9442 bits (180), Expect = 6.097e-13
Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:    7 SDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSD-PAVAEIVIKEKHNIDGRMVEAKKAVPRDDQN 261
            S + K+F+GGI  +  E  LREYF  +G V E V++ D    R RGFGF+ F D  +V + V    H+I G+ VE K+A PRD ++
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKS 195
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: MSI2H_HUMAN (RNA-binding protein Musashi homolog 2 OS=Homo sapiens OX=9606 GN=MSI2 PE=1 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.199e-53
Identity = 101/245 (41.22%), Postives = 145/245 (59.18%), Query Frame = 1 
Query:    4 QSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVI-KEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELS-PGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVANGRSGFAP 732
            Q D GK+FIGG+SW T+ + LR+YFS +GE+ E ++M+D TT R+RGFGFV F+DPA  + V+ +  H +D + ++ K A PR  Q  +              RT+KIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE+  P  +R    G  Y +   ++F+ G      P+ V  YG            G  GFAP
Sbjct:   17 QHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEVMFPPGTRGRARGLPYTM---DAFMLGMGMLGYPNFVATYG-----------RGYPGFAP 235
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: MSI2H_MOUSE (RNA-binding protein Musashi homolog 2 OS=Mus musculus OX=10090 GN=Msi2 PE=1 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 2.428e-53
Identity = 86/186 (46.24%), Postives = 124/186 (66.67%), Query Frame = 1 
Query:    4 QSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVI-KEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 558
            Q D GK+FIGG+SW T+ + LR+YFS +GE+ E ++M+D TT R+RGFGFV F+DPA  + V+ +  H +D + ++ K A PR  Q  +              RT+KIFVGGL++     D K+YF+QFG + D ++M+D  T R RGFGF+T+++E+ V+KV    FHE+N KMVE K+A PKE+
Sbjct:   17 QHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVECKKAQPKEV 190
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: DAZP1_MOUSE (DAZ-associated protein 1 OS=Mus musculus OX=10090 GN=Dazap1 PE=1 SV=2)

HSP 1 Score: 187.963 bits (476), Expect = 2.646e-53
Identity = 99/240 (41.25%), Postives = 140/240 (58.33%), Query Frame = 1 
Query:   16 GKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDP-AVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSP--GPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNYGLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVANGRSGF 726
            GKLF+GG+ W T +E LR YFS YGEVV+ VIMKD+TT ++RGFGFV F DP  V  ++    H +DGR ++ K   PR  Q   +R        P     ++ KIFVGG+     E++ ++YF +FG +T+VV++YD   QRPRGFGFIT++ E++VD+ +   FH++ GK VEVKRA P++        P G   +G     S  NG+     P+   GYG +  G + P      G+
Sbjct:   10 GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQAPGQP-GASQWGSRVAPSAANGWAGQPPPTWQQGYGPQ--GMWVPAGQAIGGY 246

HSP 2 Score: 75.8702 bits (185), Expect = 1.373e-13
Identity = 38/86 (44.19%), Postives = 52/86 (60.47%), Query Frame = 1 
Query:    7 SDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSD-PAVAEIVIKEKHNIDGRMVEAKKAVPRDDQN 261
            S + K+F+GGI  +  E  LREYF  +G V E V++ D    R RGFGF+ F D  +V + V    H+I G+ VE K+A PRD +N
Sbjct:  110 SKSNKIFVGGIPHNCGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKN 195
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: RBP1_ARATH (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 2.406e-51
Identity = 96/199 (48.24%), Postives = 133/199 (66.83%), Query Frame = 1 
Query:    1 MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPAVAEIVIKEKHNIDGRMVEAKKAVPRDD-------QNILSRNSGSIHG------SPG-PGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKE 555
            M  D  KLF+GGI+ +T+EE L++YFS YG V+EAV+ K++ TG+ RGFGFV F++       +++ H I G+ V+ +KA+ + +          L R    ++G      S G   RT+KIFVGGL+S  TE +FK YF++FG  TDVVVM+D  T RPRGFGF+TYDSE++V+ V+   FHEL+ K VEVKRA+PKE
Sbjct:    1 MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDVVKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTKKIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQSNFHELSDKRVEVKRAIPKE 199
[Close]
BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: MSI1H_HUMAN (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.280e-50
Identity = 86/184 (46.74%), Postives = 120/184 (65.22%), Query Frame = 1 
Query:   10 DNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPA-VAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 558
            D  K+FIGG+SW T +E LREYF  +GEV E ++M+D  T R+RGFGFV F D A V +++ + +H +D + ++ K A PR  Q  +              RT+KIFVGGL+   T  D K+YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE+
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEV 189

HSP 2 Score: 79.7221 bits (195), Expect = 6.118e-15
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:  304 PGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 564
            P    K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
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BLAST of Vigun08g218000.2 vs. DB:Swiss
Match: MSI1H_MOUSE (RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 2.396e-50
Identity = 86/184 (46.74%), Postives = 119/184 (64.67%), Query Frame = 1 
Query:   10 DNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVFSDPA-VAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSPGPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKEL 558
            D  K+FIGG+SW T +E LREYF  +GEV E ++M+D  T R+RGFGFV F D A V +++ + +H +D + ++ K A PR  Q  +              RT+KIFVGGL+   T  D K YF+QFG + D ++M+D  T R RGFGF+T++SE+ V+KV    FHE+N KMVE K+A PKE+
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQPKMVT------------RTKKIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMVECKKAQPKEV 189

HSP 2 Score: 79.7221 bits (195), Expect = 6.346e-15
Identity = 36/87 (41.38%), Postives = 55/87 (63.22%), Query Frame = 1 
Query:  304 PGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSP 564
            P    K+F+GGL+   T+   ++YF QFG + + +VM D  T+R RGFGF+T+  +  VDKVL ++ HEL+ K ++ K A P+   P
Sbjct:   16 PHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVAFPRRAQP 102
The following BLAST results are available for this feature:
BLAST of Vigun08g218000.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RNP1_ARATH3.467e-7255.21Heterogeneous nuclear ribonucleoprotein 1 OS=Arabi... [more]
DAZP1_XENLA4.243e-5745.23DAZ-associated protein 1 OS=Xenopus laevis OX=8355... [more]
MSIR6_DROME4.845e-5449.73RNA-binding protein Musashi homolog Rbp6 OS=Drosop... [more]
DAZP1_HUMAN2.131e-5341.25DAZ-associated protein 1 OS=Homo sapiens OX=9606 G... [more]
MSI2H_HUMAN2.199e-5341.22RNA-binding protein Musashi homolog 2 OS=Homo sapi... [more]
MSI2H_MOUSE2.428e-5346.24RNA-binding protein Musashi homolog 2 OS=Mus muscu... [more]
DAZP1_MOUSE2.646e-5341.25DAZ-associated protein 1 OS=Mus musculus OX=10090 ... [more]
RBP1_ARATH2.406e-5148.24RNA-binding protein 1 OS=Arabidopsis thaliana OX=3... [more]
MSI1H_HUMAN1.280e-5046.74RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
MSI1H_MOUSE2.396e-5046.74RNA-binding protein Musashi homolog 1 OS=Mus muscu... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 7..78
e-value: 5.6E-24
score: 95.7
coord: 107..179
e-value: 8.6E-24
score: 95.0
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 108..165
e-value: 9.5E-16
score: 57.4
coord: 8..69
e-value: 1.7E-15
score: 56.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 6..82
score: 17.541
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 106..183
score: 17.677
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..91
e-value: 8.8E-26
score: 92.1
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 103..181
e-value: 9.6E-26
score: 91.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..479
NoneNo IPR availableCDDcd12325RRM1_hnRNPA_hnRNPD_likecoord: 8..78
e-value: 8.07575E-37
score: 128.087
IPR034131DAZ-associated protein 1, RNA recognition motif 2CDDcd12327RRM2_DAZAP1coord: 104..183
e-value: 4.33176E-47
score: 155.601
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 104..202
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..105

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun08g218000.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g218000.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g218000.2; organism=Vigna unguiculata; type=mRNA; length=2595bp
TCCTTCATTTGCAGAGGCCCTATATAATGGTCATACCACATCTCGCAGCT
TCTCTCTCGGCTTTCTCCTTATAAACTTCCGATGTGTTTTTCTCTTTCTC
TCTCCATAGTTTTGTTTTGTTTATAAAATTTTGCAATCGGTTTGGCAACT
GAATTTTCATTTGTTAATCAAATTATTAATAATTgaaaaagaagaagaag
aaaagaaAGGGTGGGGAGGCATAGCCAGATAATGAACCTGCCCTCTGTTC
TTATTCTCATTGTGCCTCCCCTCAGATCTTAAGATTTGCCATCTGGGTCG
TCTTCAATCGGATTGCTTAGCCTTTGATTCACTGCTTGATGATTGTTGAT
GAAGGATCCGATGTTTTGTAACTGAATCCGACAATATCTATTTTTGCATC
GTTAATACAGTCTCTCAGTTTGCCTTAATTTGAGATAAAATGCAATCAGA
TAATGGCAAGTTATTTATCGGTGGAATATCATGGGACACAAATGAGGAGC
GACTCAGGGAGTATTTCAGTACTTATGGGGAGGTTGTGGAAGCAGTGATA
ATGAAGGATCGGACAACAGGTAGAGCCAGAGGATTTGGTTTTGTTGTTTT
TTCCGACCCTGCTGTCGCTGAAATAGTCATAAAAGAGAAGCACAACATTG
ACGGAAGGATGGTTGAGGCAAAGAAAGCGGTTCCCAGGGATGATCAGAAC
ATACTGAGTAGAAACAGTGGCAGCATCCATGGTTCACCTGGTCCTGGTCG
CACTAGAAAGATATTTGTTGGAGGTTTAGCATCAACAGTGACGGAGAGTG
ATTTCAAAAAGTACTTTGATCAGTTTGGGACTATAACAGACGTTGTAGTT
ATGTATGATCACAACACTCAGAGACCAAGAGGTTTTGGATTTATCACGTA
TGATTCTGAGGAGGCTGTTGACAAGGTCTTACTAAAGACATTTCATGAAT
TGAACGGGAAAATGGTTGAGGTCAAGCGAGCAGTTCCTAAGGAATTATCA
CCAGGACCAAGCCGCACCCCACTCGGTGGATATAACTATGGTCTTAGTAG
GGTCAATAGTTTCTTAAATGGCTTCACTCAGGGGTATAGTCCAAGTACTG
TTGGAGGCTATGGACTTCGAGCCGATGGTAGATTCAGTCCTGTTGCCAAT
GGTAGAAGTGGATTTGCTCCATTTGGATCAGGCTATGGAATGAGCATGAA
TTTTGAGCCTGGTTTGAATGCTGGATTTGGGGGGAATGCAAATTTCAACA
GCAATCTTAGCTACGGGCGGGGAGTAAATCCTTATTTTATTGGCAGCTCC
AATCGGTTTGGCAGTCCTGTTGGATTTGAAAGTGGCAATGGAGGAAACAA
TTCTTTCTTCAGTTCTGTGACTCGAAATTTGTGGGGTAATGGTGGCCTTA
GTTATGGAACAAATTCTGCAAATTCCAATGCGTACATTGGATCAGGGAGT
GGAAGTATTGGTGGGAATACATTTGGCAACACTGGAGTCAACTGGGGTGG
TTCTTCAGCAATTTCTGGGCAGGGAGGAGGGAACAACATGTCACAAAGTA
GTGGCAACCTGGGATATGGAAGTGGTGACAATAATTATGGCTTGGGGACT
GGAGGGTATGGAAGAAACACTGGTACCACTTTTGCACCAACATCTTCGTA
CTCTGCATCAAATGGTGGTGTTGATGGGGCTTTTGCAGACTTTTACAATA
ATAGTTCTGTTTATGGAGACCCCACTTGGCGCTCTTCAAATTCTGAGAGA
GATGGATCTGGTCCCTTCGGTTATGGACTTGGTGGAGCAGCTTCTGATGT
TTCTACCAAGAGTTCTCCAGGTTATGTTGGTGGTTATACTGTTAATAAGA
GGCAGCCAAATAGGGGAATCGCGACATAGGAAGATCATTTTGATGACACG
AACTTGTAGGTGAAGATAATCCAGTGAAGCAGGTGAATTGTGAATTTTGC
ACACCACTGTTGTTACTGTATTTGGGTTTAAGACGCAAGATGTTTGGTTT
TCTAGAGCTAACTGGAGTACCTGTTTTGAGGGTTCAGATATAGAGATAGA
TTTCAAGGGAATGTTAAGGCTTGAGTTTTTTGAGTTACTGTTTAGGTTTT
GGGATTTGAGTGAGATGTAAAATCTGATTGCGGGATATAGCGGAAGTGTA
TCATGCACCACTTGTGAGGCAGCAATATAAAAAGATGGACAGCATTTTTT
TTCATTTTCCTTTTTTTTGGGGTAGATTTTTTTGTCTTTGATGTCTTGCA
AAAGTTGTGGCTTCGTTCTTCTCAGGAATTGTTTGTTTCTTCATCCATCA
TTTTGGTTTGCTTTTAGCAGATTGTATCTGAGGTTTTTTTTTTTTCTCTT
ATTACTAGTGTGAAACATTGAAGGGATACCCATCTAGGGTCCCGTGAATA
AGTTACCATATGCTCTGATTCTTTTTCTAAAGGGGAATATTTTATGCTAC
ACATTCTAGCTGCTAAATCTCATAAATGGATTTCTATTTCCCTATTTTCC
AACTTTTATCCCACTGCTGTTTTTAGCATAGGTAGATCGTTTAAGATTGA
GTTGTACAAATTGTAAGCATCACTAATAAAGCAATACATTGAATG
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protein sequence of Vigun08g218000.2_Vu_IT97K-499-35_v1.1

>Vigun08g218000.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g218000.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g218000.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=480bp
MQSDNGKLFIGGISWDTNEERLREYFSTYGEVVEAVIMKDRTTGRARGFG
FVVFSDPAVAEIVIKEKHNIDGRMVEAKKAVPRDDQNILSRNSGSIHGSP
GPGRTRKIFVGGLASTVTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFG
FITYDSEEAVDKVLLKTFHELNGKMVEVKRAVPKELSPGPSRTPLGGYNY
GLSRVNSFLNGFTQGYSPSTVGGYGLRADGRFSPVANGRSGFAPFGSGYG
MSMNFEPGLNAGFGGNANFNSNLSYGRGVNPYFIGSSNRFGSPVGFESGN
GGNNSFFSSVTRNLWGNGGLSYGTNSANSNAYIGSGSGSIGGNTFGNTGV
NWGGSSAISGQGGGNNMSQSSGNLGYGSGDNNYGLGTGGYGRNTGTTFAP
TSSYSASNGGVDGAFADFYNNSSVYGDPTWRSSNSERDGSGPFGYGLGGA
ASDVSTKSSPGYVGGYTVNKRQPNRGIAT*
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mRNA from alignment at Vu08:37785452..37790480+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun08g218000.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g218000.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g218000.2; organism=Vigna unguiculata; type=mRNA; length=5029bp; location=Sequence derived from: Vu08:37785452..37790480+ (Vigna unguiculata
TCCTTCATTTGCAGAGGCCCTATATAATGGTCATACCACATCTCGCAGCT
TCTCTCTCGGCTTTCTCCTTATAAACTTCCGATGTGTTTTTCTCTTTCTC
TCTCCATAGTTTTGTTTTGTTTATAAAATTTTGCAATCGGTTTGGCAACT
GAATTTTCATTTGTTAATCAAATTATTAATAATTGAAAAAGAAGAAGAAG
AAAAGAAAGGGTGGGGAGGCATAGCCAGATAATGAACCTGCCCTCTGTTC
TTATTCTCATTGTGCCTCCCCTCAGATCTTAAGATTTGCCATCTGGGTCG
TCTTCAATCGGTGGGTTTCGAAGGAATCTCGATTGAAGTTTTGATCTTTC
TTCAATTGGGTCTGCCTTTGGATCTTTGATTATTGAAAATTTTTGTGGGT
TTTTTTTTTTTTTTTCCAGGATTGCTTAGCCTTTGATTCACTGCTTGATG
ATTGTTGATGAAGGATCCGATGTTTTGTAACTGAATCCGACAATATCTAT
TTTTGCATCGTTAATACAGTCTCTCAGTTTGCCTTAATTTGAGGTATTGT
TTGTAATGCTTCTTTTTTTGTTATGCTAGGGACTATTTGTTTTTGAACAA
TTTGATAAACGATAATGCTATCACACTTTGATTTTATCCTACCCGGATTT
ATTTGCATTTCATCCCAGACTAGGATTCTTTTGTATTTTGTTTTGTGAGT
AAAAAAAAAAGAAATAAAGTTATGCTTTTGCCTATTGTTGTGTATGGGAT
TGGATTGGATTGGATCCGTCAAGAACATGCCTTACTTTTCTTATACCTTA
TTGTTAGGTGCTAAAAAGGGTTGCTTTGTCCATTTTCAATGCTGCTGCTT
CCACTTGCATTTGTATGTTTTTTAGGTGAAATGCTTATTGGATGAAGCGT
CTTTTTGCTTGTAGATAAAATGCAATCAGATAATGGCAAGTTATTTATCG
GTGGAATATCATGGGACACAAATGAGGAGCGACTCAGGGAGTATTTCAGT
ACTTATGGGGAGGTTGTGGAAGCAGTGATAATGAAGGATCGGACAACAGG
TAGAGCCAGAGGATTTGGTTTTGTTGTTTTTTCCGACCCTGCTGTCGCTG
AAATAGTCATAAAAGAGAAGCACAACATTGACGGAAGGATGGTAATTCTT
GTTATTTTCCCCTCTTAAGTCTAAAACTTGCATTTTGAGATGATTCACTT
TTTGAATTATGAAACATCGAAAGGTAGCGTGTTTTTTTTTATTGAAATGT
ACACTGATTTGCTAAATTTTGCTGGATTCGCAATCTCAAAAATTTCTTAG
CAAGATTTTAAAATGGAGCAGTAGTTAAATCTTTTTTTTTTTTTTCTTTG
TTATTGTTCCCTTCTCCATGCATCTGTTGTAAGGATTATATGCATCTGTT
GTAAGGATTATAGATCTTCAACACTTTTTTATTTTCTGATCTATGGTCAT
CTTCAATACTGTTTCTTCTATCGCTAGGTTGAGGCAAAGAAAGCGGTTCC
CAGGGATGATCAGAACATACTGAGTAGAAACAGTGGCAGCATCCATGGTT
CACCTGGTCCTGGTCGCACTAGAAAGATATTTGTTGGAGGTTTAGCATCA
ACAGTGACGGAGAGTGATTTCAAAAAGTACTTTGATCAGTTTGGGACTAT
AACAGACGTTGTAGTTATGTATGATCACAACACTCAGAGACCAAGAGGTT
TTGGATTTATCACGTATGATTCTGAGGAGGCTGTTGACAAGGTCTTACTA
AAGACATTTCATGAATTGAACGGGAAAATGGTTGAGGTCAAGCGAGCAGT
TCCTAAGGAATTATCACCAGGACCAAGCCGCACCCCACTCGGTGGATATA
ACTATGGTCTTAGTAGGGTCAATAGTTTCTTAAATGGCTTCACTCAGGGG
TATAGTCCAAGTACTGTTGGAGGCTATGGACTTCGAGCCGATGGTAGATT
CAGTCCTGTTGCCAATGGTAGAAGTGGATTTGCTCCATTTGGATCAGGCT
ATGGAATGAGCATGAATTTTGAGCCTGGTTTGAATGCTGGATTTGGGGGG
AATGCAAATTTCAACAGCAATCTTAGCTACGGGCGGGGAGTAAATCCTTA
TTTTATTGGCAGCTCCAATCGGTTTGGCAGTCCTGTTGGATTTGAAAGTG
GCAATGGAGGAAACAATTCTTTCTTCAGTTCTGTGACTCGAAATTTGTGG
GGTAATGGTGGCCTTAGTTATGGAACAAATTCTGCAAATTCCAATGCGTA
CATTGGATCAGGGAGTGGAAGTATTGGTGGGAATACATTTGGCAACACTG
GAGTCAACTGGGGTGGTTCTTCAGCAATTTCTGGGCAGGGAGGAGGGAAC
AACATGTCACAAAGTAGTGGCAACCTGGGATATGGAAGTGGTGACAATAA
TTATGGCTTGGGGACTGGAGGGTATGGAAGAAACACTGGTACCACTTTTG
CACCAACATCTTCGTACTCTGCATCAAATGGTGGTGTTGATGGGGCTTTT
GCAGACTTTTACAATAATAGTTCTGTTTATGGAGACCCCACTTGGCGCTC
TTCAAATTCTGAGAGAGATGGATCTGGTCCCTTCGGTTATGGACTTGGTG
GAGCAGCTTCTGATGTTTCTACCAAGAGTTCTCCAGGTTATGTTGGTGGT
TATACTGTTAATAAGAGGCAGCCAAATAGGGGTAAGACTTACAATTTTTT
TTGACGATTTTCTTATTGATATGCTTGGATTTTTAGTGAATGTCAGTACC
TTATGTAATTGATCTTTGATTAATGTATTTTTTCTTTGCTAAGTTTGCTA
TTACTATGATGGAACACTAATTAGTTCTTTGTCTATTTTTCAACTAGATT
TTGTTGCTTTTCTCTTTTACTTAGATTTATACAGTTAACTTGTTTCTTAG
AACAGTTTTTAATGACATCCAATGACGACCATTATTTTATTGTTCTGTGT
CATAAAAGGGGTCCTTTTGATCAGGAAAAACTAACTAGCCTAGAGAAGAG
GGTTACAACCCAAAGTGAGAGGGCATGTCGTAATGGAAAAGTTTTATTAG
GTTTGTTTAGGGAACTTATAATTTTATTTAGATTCCCACGAATGTAGGCA
AGAGTTGTTGAACTACGTAAAATTTGTGCCTTTTGCTATTTTTCTGTGGT
CTTTATTGTGTGTGAAAGGGATTTCCCCAACATATTTATATGGTTTTTTA
TCCAAGTCTTGTAGGAAATATAACTTTTAGGCTATGAAAACCGAGAGGTC
CCATACGTATAGGAATGTAAGCTTCAAACGAAAAGATGGCTATTACGGAA
ACAAGTAATGTTAAGCTTCATAGAAATATGCATATGGTTGTCATTATTCC
CCAATCTGACTTTTTATTAGCATTACATGGCCACAATCTGAAATTTTTAT
CCATTGCTTGGGTCAGTGATGTCAGACTTTTTAATAATTTTTTTTTTAAA
CTAAAGCCTTACTTCAATTGCGATCAGAATTTGTTGCTGAACAGTATAAC
TCCATAAATGCGAGAGATGATCACTAATGGCTAATGTCTAATTTCATATT
TTCTTTCAAAATAAACAGTCTGGTATGGACTCTAGGATTCAACATCTGTA
TGGTTGAGGGCTGTATTTGTGAGTTAACAGTTGGTTAAAAAAAGTTTTAA
ACATGTTGACCATAATTCCACCGAAATGTTAGAAACTATCATTTTTCATA
TATATATATATATATAGAAACACACAGAGATATAGGTAGATAGACATGAA
ACATTTCGGCTTCATGTTTCATGTCTGTCTTTCGCAAAACTTGAGACCAG
GTTAAGAAAACTGTTTTTTAGATAGAAGTCATAGATGTCATGTTAAACAT
CAGACCAGAACTAGTTCTTCAGTGTCCTTTTTCTTCTGAGTTGTAAGACT
GATTTTGAATGTTTTTGCTGAATGTGTTTAGATCTTAAGAGTATGCAATC
ACGACTCTAAATATTATGTTGCGTGCAATACATTTTCATGTGGGAATTTA
ATCTCCTGTTGTCTGTTATTATTCTGGTGTTTAATAGTTAGTCGAGAATA
TGTTGAACATTATTTTTCTTTTCGTTACATAATACTTTGTTCAATTTTCT
TCCGACTTATGTTCTCCATTTCTCAAGTCTTGGTAAGTATAACTCAGAAG
TGCAAGAGCTGATATGAATTTGTCTTTGAGTAAAACTTGGTCACATGTTC
CTTTGTAGTGCTCCATTGTTTTCATGTTACTTGTGATGTGTCCTTTCAAT
AATTAATTTTGTATTCAAAGACTGATAAAGTTGTATGTTTTTGGTTCAGG
AATCGCGACATAGGAAGATCATTTTGATGACACGAACTTGTAGGTGAAGA
TAATCCAGTGAAGCAGGTGAATTGTGAATTTTGCACACCACTGTTGTTAC
TGTATTTGGGTTTAAGACGCAAGATGTTTGGTTTTCTAGAGCTAACTGGA
GTACCTGTTTTGAGGGTTCAGATATAGAGATAGATTTCAAGGGAATGTTA
AGGCTTGAGTTTTTTGAGTTACTGTTTAGGTTTTGGGATTTGAGTGAGAT
GTAAAATCTGATTGCGGGATATAGCGGAAGTGTATCATGCACCACTTGTG
AGGCAGCAATATAAAAAGATGGACAGCATTTTTTTTCATTTTCCTTTTTT
TTGGGGTAGATTTTTTTGTCTTTGATGTCTTGCAAAAGTTGTGGCTTCGT
TCTTCTCAGGAATTGTTTGTTTCTTCATCCATCATTTTGGTTTGCTTTTA
GCAGATTGTATCTGAGGTTTTTTTTTTTTCTCTTATTACTAGTGTGAAAC
ATTGAAGGGATACCCATCTAGGGTCCCGTGAATAAGTTACCATATGCTCT
GATTCTTTTTCTAAAGGGGAATATTTTATGCTACACATTCTAGCTGCTAA
ATCTCATAAATGGATTTCTATTTCCCTATTTTCCAACTTTTATCCCACTG
CTGTTTTTAGCATAGGTAGATCGTTTAAGATTGAGTTGTACAAATTGTAA
GCATCACTAATAAAGCAATACATTGAATG
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Coding sequence (CDS) from alignment at Vu08:37785452..37790480+

>Vigun08g218000.2_Vu_IT97K-499-35_v1.1 ID=Vigun08g218000.2_Vu_IT97K-499-35_v1.1; Name=Vigun08g218000.2; organism=Vigna unguiculata; type=CDS; length=1440bp; location=Sequence derived from: Vu08:37785452..37790480+ (Vigna unguiculata
ATGCAATCAGATAATGGCAAGTTATTTATCGGTGGAATATCATGGGACAC
AAATGAGGAGCGACTCAGGGAGTATTTCAGTACTTATGGGGAGGTTGTGG
AAGCAGTGATAATGAAGGATCGGACAACAGGTAGAGCCAGAGGATTTGGT
TTTGTTGTTTTTTCCGACCCTGCTGTCGCTGAAATAGTCATAAAAGAGAA
GCACAACATTGACGGAAGGATGGTTGAGGCAAAGAAAGCGGTTCCCAGGG
ATGATCAGAACATACTGAGTAGAAACAGTGGCAGCATCCATGGTTCACCT
GGTCCTGGTCGCACTAGAAAGATATTTGTTGGAGGTTTAGCATCAACAGT
GACGGAGAGTGATTTCAAAAAGTACTTTGATCAGTTTGGGACTATAACAG
ACGTTGTAGTTATGTATGATCACAACACTCAGAGACCAAGAGGTTTTGGA
TTTATCACGTATGATTCTGAGGAGGCTGTTGACAAGGTCTTACTAAAGAC
ATTTCATGAATTGAACGGGAAAATGGTTGAGGTCAAGCGAGCAGTTCCTA
AGGAATTATCACCAGGACCAAGCCGCACCCCACTCGGTGGATATAACTAT
GGTCTTAGTAGGGTCAATAGTTTCTTAAATGGCTTCACTCAGGGGTATAG
TCCAAGTACTGTTGGAGGCTATGGACTTCGAGCCGATGGTAGATTCAGTC
CTGTTGCCAATGGTAGAAGTGGATTTGCTCCATTTGGATCAGGCTATGGA
ATGAGCATGAATTTTGAGCCTGGTTTGAATGCTGGATTTGGGGGGAATGC
AAATTTCAACAGCAATCTTAGCTACGGGCGGGGAGTAAATCCTTATTTTA
TTGGCAGCTCCAATCGGTTTGGCAGTCCTGTTGGATTTGAAAGTGGCAAT
GGAGGAAACAATTCTTTCTTCAGTTCTGTGACTCGAAATTTGTGGGGTAA
TGGTGGCCTTAGTTATGGAACAAATTCTGCAAATTCCAATGCGTACATTG
GATCAGGGAGTGGAAGTATTGGTGGGAATACATTTGGCAACACTGGAGTC
AACTGGGGTGGTTCTTCAGCAATTTCTGGGCAGGGAGGAGGGAACAACAT
GTCACAAAGTAGTGGCAACCTGGGATATGGAAGTGGTGACAATAATTATG
GCTTGGGGACTGGAGGGTATGGAAGAAACACTGGTACCACTTTTGCACCA
ACATCTTCGTACTCTGCATCAAATGGTGGTGTTGATGGGGCTTTTGCAGA
CTTTTACAATAATAGTTCTGTTTATGGAGACCCCACTTGGCGCTCTTCAA
ATTCTGAGAGAGATGGATCTGGTCCCTTCGGTTATGGACTTGGTGGAGCA
GCTTCTGATGTTTCTACCAAGAGTTCTCCAGGTTATGTTGGTGGTTATAC
TGTTAATAAGAGGCAGCCAAATAGGGGAATCGCGACATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR034131DAZAP1_RRM2
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding