Vigun09g160300.1

Transcript Overview


Name	Vigun09g160300.1
Unique Name	Vigun09g160300.1_Vu_IT97K-499-35_v1.1
Type	mRNA
Organism	Vigna unguiculata (cowpea)
Sequence length	2386

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vu09	supercontig	Vu09:32772935..32781903 -	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vuvuL369	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
crvuL308	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvvuL802	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
caivuL0635	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavuL443	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvuL0943	Cajanus cajan Asha genome v1.0	Cajanus cajan
anvuL0203	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0251	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0642	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL1209	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvuL537	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvuL726	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
vrvvuL400	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vrvvuL466	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvuL407	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
avjvuL478	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvuL614	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvuL419		Cicer arietinum
ccavuL336	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavuL438	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vstvuL247	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvuL301	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvuL265	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvuL316	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvuL061	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvuL708	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris

Orthologs


Gene/Transcript	Assembly	Species
PvulFLAVERTChr01.1000470	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vigst.02G106500.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
rna-KK1_009216	Cajanus cajan Asha genome v1.0	Cajanus cajan
Phvul.009G130800.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
jg54537.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-TanjilR_01877	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
LR48_mrnaVigan04g171200	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
rna-TanjilR_13899	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Va04G053760.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Ca_03896	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Cr_05312.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
Vigan.02G142400.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Va07G058010.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vigst.03G132800.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
Ca_13945.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Cc_v2.0_06468.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
LR48_mrnaVigan07g225600	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
rna-TanjilR_05051	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vigan.03G212800.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Cc_v2.0_11525.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-TanjilR_09666	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
PvulFLAVERTChr09.894	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
rna-XM_022782341.1	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
rna-XM_022780611.1	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigun08g071200.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigun09g160300	Vigun09g160300_Vu_IT97K-499-35_v1.1	Vigna unguiculata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g160300.1	Vigun09g160300.1_Vu_IT97K-499-35_v1.1-protein	Vigna unguiculata	polypeptide
Vigun09g160300.1_Vu_IT97K-499-35_v1.1	Vigun09g160300.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g160300.1.v1.1.CDS.6	Vigun09g160300.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g160300.1.v1.1.CDS.5	Vigun09g160300.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g160300.1.v1.1.CDS.4	Vigun09g160300.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g160300.1.v1.1.CDS.3	Vigun09g160300.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g160300.1.v1.1.CDS.2	Vigun09g160300.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g160300.1.v1.1.CDS.1	Vigun09g160300.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g160300.1.v1.1.three_prime_UTR.1	Vigun09g160300.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	three_prime_UTR

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g160300.1.v1.1.five_prime_UTR.3	Vigun09g160300.1.v1.1.five_prime_UTR.3_Vu_IT97K-499-35_v1.1	Vigna unguiculata	five_prime_UTR
Vigun09g160300.1.v1.1.five_prime_UTR.2	Vigun09g160300.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1	Vigna unguiculata	five_prime_UTR
Vigun09g160300.1.v1.1.five_prime_UTR.1	Vigun09g160300.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	five_prime_UTR

Homology

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: EHD3_ORYSJ (PHD finger protein EHD3 OS=Oryza sativa subsp. japonica OX=39947 GN=EHD3 PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 1.831e-54
Identity = 152/488 (31.15%), Postives = 216/488 (44.26%), Query Frame = 1

Query:  361 WGNIVLKHLYQSLGDGNGGVEGCIREAL--NPKQNHATTVMETFIIEKDGKRCSSQSE--LLSHRTGKEANR--HADVMCNGCSSELPDHGVTEMCQRVLSNILTTEKFRSLCKALLENFQGMKPESVFDFTIMNSRMKEQAYEQSPALFLSDIQQVWGKLQDTGNEIVALAKXXXXXXXXXXXELVGVSAPSTFREKQPSCNGELGFHVKPEQTQDCAMHRIGS-------------------------------CSRCGETADDKDCLVCDSCEEIYHVSCIE---PSVKEIIPHKSWYCAKCTAKGI--------GSPHE-----HCVLCERLNDEQTPNGIIGDESFPTIKETKNEFEENSNCTSDGIEGSIGEKTTP---ICKICRNEVDGNKRKKVKVCGHRFCPNKYYHVRCLTKKQL-----KSYGHCWYCPSCICCVCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W + +   L        GG++ CIR AL  NP       V+ T   E  G    SQ E   + H  G    +   AD      ++         MC   L +IL ++KF  LC  LL  F   KP  V D   ++++M+   Y  +PALF  DIQQ+W K +  G E+  LA             L  +S  S  ++       E+  H   E +   A+H +                                 C  CG   D ++ L+CD C+ +YH +C++   P +K++     W+C+ C+ K             H+     +CVLC++L   +T      D   P IK    E  E S+ +S G +      TT    +CK C    D +KR    VCGH +C  K+YH+RCL   QL     K  G CWYCPSC+C  C  D+DDDQIV+CDGCD GYH+YC+ P +++IP GKW+C  C
Sbjct:   57 WRDTLHGFLQSPAISQGGGIQTCIRHALQHNPCLLTNGVVVHT---EFKGNPAHSQGEEAKVQHPNGAAGGKVVSADAAIQDAAAAASSEANKAMCNNALFDILVSQKFALLCHLLLGTFHVNKPGDVIDLEKIDAKMRNGDYAHNPALFDDDIQQMWEKFEQVGQEMTGLAS-----------NLSTISRVSYQKQASGFSEAEVAEHRIEEISLPGAVHVVTKESTTTVQLAPCDSSHSTIPKRTVPPGRDLCPCDGCGTKVDVEEGLICDECDTMYHFACVKLLNPDIKQVP--AIWHCSTCSFKKKELAADTTNNVAHDCLHGGNCVLCDQLELVKTEE---EDPKLP-IKIELAEEREGSSVSSMGEDNEPDLSTTALSNLCKHCGTCEDDDKR--FMVCGHPYCVYKFYHIRCLKTSQLAIEQQKKLG-CWYCPSCLCRGCFQDKDDDQIVMCDGCDEGYHIYCMRPARNTIPKGKWYCTFC 521

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: REQU_CHICK (Zinc finger protein ubi-d4 OS=Gallus gallus OX=9031 GN=REQ PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.993e-12
Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 1

Query: 1486 WYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C CC +C    +DDQ++ CD CDRGYH+YCLTPP S  P G W C LC
Sbjct:  336 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPPMSEPPEGSWSCHLC 388

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: REQU_HUMAN (Zinc finger protein ubi-d4 OS=Homo sapiens OX=9606 GN=DPF2 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.913e-11
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 1

Query: 1486 WYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C CC +C    +DDQ++ CD CDRGYH+YCLTP  S  P G W C LC
Sbjct:  322 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: REQUB_XENLA (Zinc finger protein ubi-d4 B (Fragment) OS=Xenopus laevis OX=8355 GN=req-b PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 4.317e-11
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 1

Query: 1486 WYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C CC +C    +DDQ++ CD CDRGYH+YCL+PP +  P G W C LC
Sbjct:  299 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLSPPVAEPPEGSWSCHLC 351

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: REQU_MOUSE (Zinc finger protein ubi-d4 OS=Mus musculus OX=10090 GN=Dpf2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.205e-11
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 1

Query: 1486 WYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C CC +C    +DDQ++ CD CDRGYH+YCLTP  S  P G W C LC
Sbjct:  322 WQCIECKCCNLCGTSENDDQLLFCDDCDRGYHMYCLTPSMSEPPEGSWSCHLC 374

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: REQUA_XENLA (Zinc finger protein ubi-d4 A OS=Xenopus laevis OX=8355 GN=req-a PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.126e-11
Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 1

Query: 1486 WYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C CC +C    +DDQ++ CD CDRGYH+YCL PP +  P G W C LC
Sbjct:  321 WQCIECKCCNICGTSENDDQLLFCDDCDRGYHMYCLVPPVAEPPEGSWSCHLC 373

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: KMT2D_MOUSE (Histone-lysine N-methyltransferase 2D OS=Mus musculus OX=10090 GN=Kmt2d PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 1.427e-10
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 1

Query: 1399 KVCGHRFCPN--KYYHVRCLTKKQLKSYGHCWYCPSC-ICCVCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKW------FCRLCDAGIQAIHKAKKAYES 1689
            ++C   FC +   +YH  CL           W CP C +C  C    +D ++++C+ CD+GYH +CL PP   +P+  W       CR C AG   ++   + +E+
Sbjct:  237 QLCDLLFCTSCGHHYHGACLDTALTARKRASWQCPECKVCQSCRKPGNDSKMLVCETCDKGYHTFCLKPPMEDLPAHSWKCKTCRLCRACGAGSAELNPNSEWFEN 342

HSP 2 Score: 62.7734 bits (151), Expect = 1.056e-8
Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 1

Query: 1435 YHVRCLTKKQLK-SYGHCWYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLCDAGIQ 1656
            YH  C+  K  K      W C  CI C VC    D  ++++CD CD  YH YCL PP  ++P G W C+ C + +Q
Sbjct: 1360 YHPYCVNSKITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQ 1435

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: KMT2D_HUMAN (Histone-lysine N-methyltransferase 2D OS=Homo sapiens OX=9606 GN=KMT2D PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.843e-10
Identity = 28/80 (35.00%), Postives = 41/80 (51.25%), Query Frame = 1

Query: 1405 CGHRFCPNKYYHVRCLTKKQLKSYGHCWYCPSC-ICCVCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            CGH      +YH  CL           W CP C +C  C    +D ++++C+ CD+GYH +CL PP   +P+  W C+ C
Sbjct:  247 CGH------HYHGACLDTALTARKRAGWQCPECKVCQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKAC 320

HSP 2 Score: 62.7734 bits (151), Expect = 1.102e-8
Identity = 30/76 (39.47%), Postives = 40/76 (52.63%), Query Frame = 1

Query: 1435 YHVRCLTKKQLK-SYGHCWYCPSCICC-VCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLCDAGIQ 1656
            YH  C+  K  K      W C  CI C VC    D  ++++CD CD  YH YCL PP  ++P G W C+ C + +Q
Sbjct: 1404 YHPYCVNSKITKVMLLKGWRCVECIVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQ 1479

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: DPF3_DANRE (Zinc finger protein DPF3 OS=Danio rerio OX=7955 GN=dpf3 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 2.164e-10
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1

Query: 1486 WYCPSC-ICCVCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C  C +C    +DDQ++ CD CDRGYH+YCL PP +  P G W C LC
Sbjct:  325 WQCIECKSCSLCGTSENDDQLLFCDDCDRGYHMYCLKPPMTQPPEGSWSCHLC 377

[Close]

BLAST of Vigun09g160300.1 vs. DB:Swiss
Match: DPF3_MOUSE (Zinc finger protein DPF3 OS=Mus musculus OX=10090 GN=Dpf3 PE=1 SV=2)

HSP 1 Score: 66.2402 bits (160), Expect = 2.721e-10
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1

Query: 1486 WYCPSCICCV-CLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLC 1641
            W C  C  C+ C    +DDQ++ CD CDRGYH+YCL PP +  P G W C LC
Sbjct:  311 WQCIECKSCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLC 363

The following BLAST results are available for this feature:

BLAST of Vigun09g160300.1 vs. DB:Swiss

BLAST of Vigun09g160300.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
EHD3_ORYSJ	1.831e-54	31.15	PHD finger protein EHD3 OS=Oryza sativa subsp. jap...	[more]
REQU_CHICK	1.993e-12	56.60	Zinc finger protein ubi-d4 OS=Gallus gallus OX=903...	[more]
REQU_HUMAN	3.913e-11	54.72	Zinc finger protein ubi-d4 OS=Homo sapiens OX=9606...	[more]
REQUB_XENLA	4.317e-11	52.83	Zinc finger protein ubi-d4 B (Fragment) OS=Xenopus...	[more]
REQU_MOUSE	5.205e-11	54.72	Zinc finger protein ubi-d4 OS=Mus musculus OX=1009...	[more]
REQUA_XENLA	6.126e-11	52.83	Zinc finger protein ubi-d4 A OS=Xenopus laevis OX=...	[more]
KMT2D_MOUSE	1.427e-10	30.19	Histone-lysine N-methyltransferase 2D OS=Mus muscu...	[more]
KMT2D_HUMAN	1.843e-10	35.00	Histone-lysine N-methyltransferase 2D OS=Homo sapi...	[more]
DPF3_DANRE	2.164e-10	50.94	Zinc finger protein DPF3 OS=Danio rerio OX=7955 GN...	[more]
DPF3_MOUSE	2.721e-10	50.94	Zinc finger protein DPF3 OS=Mus musculus OX=10090 ...	[more]

InterPro

Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 503..548 e-value: 5.6E-9 score: 45.8 coord: 450..502 e-value: 0.019 score: 24.1 coord: 339..386 e-value: 9.6E-8 score: 41.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 442..554 e-value: 5.6E-18 score: 67.0
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 340..387 e-value: 2.3E-8 score: 33.8 coord: 502..548 e-value: 4.6E-12 score: 45.6
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 500..550 score: 10.086
IPR019787	Zinc finger, PHD-finger	PROSITE	PS50016	ZF_PHD_2	coord: 337..388 score: 9.606
None	No IPR available	GENE3D	2.30.30.1150		coord: 226..388 e-value: 4.1E-14 score: 55.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..579
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 562..590
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 340..385
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 451..501 score: 8.89
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 502..550
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 330..389

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Vu09:32772935..32781903-
coding sequence from alignment at Vu09:32772935..32781903-

mRNA sequence

>Vigun09g160300.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g160300.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g160300.1; organism=Vigna unguiculata; type=mRNA; length=2386bp
aaaaatgaagtaaTACAAGACACGGGTTGAAGCAGTAACAAAGAGAGTCA
GCGTGCAAAGGAAACTGGGAAGACGCGTCCTTTTGGTTTCGAAATTATTC
AGTTTTTGTTTTCGTTTTCAACTGTCATCATATTTTGCGGGGTGTTTCGA
CTTCTAATAGCGTTTTTGAGGGTTTGGAGGCATTTGGGTATCCCAATCCT
TACAAAATTTTGGATTTTTGAAGATAAGGCTGAATGTGATGATCGAGTCT
AGTCTTTGAAAGATGAAGGCATGGATATTGAGGTGACAATTAAAGATTAT
AATTGTGTTGCTGAAGAGGGACAACATTTGAATAGTGAAGCCATGAATGA
TGAGGTTGCAATTGCTCATGCTAACGGGGTTGTTGGAGAGGTTAGTGTCC
TGAAAAGTGAACCCTTTAGTAATGGGGTGGCAGTTGGAGATAAAGGTGGC
TCTGGTGGAGTGGAATGTTTGCGAACTTATAAGAGACGTAAGAAGTCAAG
TTCAAGAGGAAAAATTCAGGAACAATGGGTAGCAGGCATGGCAACTGCAA
GTGGAATAGCTGATCAGAATGTGAAGAAACCATGTGATCTAGCTTTAGGC
AATACTTCAGATGATTGTTCCCAAGGACAGTGGGGAAATATTGTACTAAA
GCATTTATATCAGTCATTAGGTGATGGCAATGGTGGTGTGGAGGGGTGCA
TAAGGGAAGCACTTAATCCTAAACAAAATCATGCCACTACTGTTATGGAA
ACCTTTATAATTGAAAAAGATGGTAAAAGATGCTCTTCGCAATCTGAGCT
GCTTTCTCATAGAACAGGGAAGGAAGCTAATCGACATGCAGATGTCATGT
GTAATGGATGTTCCAGTGAATTACCTGACCATGGTGTGACTGAGATGTGT
CAACGTGTTCTATCTAATATCTTAACCACAGAAAAATTTCGCTCACTGTG
TAAGGCTTTGCTTGAAAATTTCCAGGGAATGAAGCCTGAAAGTGTATTTG
ACTTTACCATCATGAATTCAAGGATGAAGGAACAAGCTTATGAACAATCA
CCAGCACTCTTCTTGTCAGATATTCAACAGGTTTGGGGAAAGCTTCAAGA
CACTGGTAACGAGATTGTTGCTCTTGCCAAGAGCCTATCCAGCATTTCAA
CAACTTCCTACTCAGAGCTGGTAGGAGTTTCAGCACCGAGCACATTTCGA
GAGAAGCAGCCGTCCTGCAACGGAGAATTGGGCTTTCACGTGAAGCCAGA
ACAGACGCAAGACTGTGCTATGCACAGAATCGGCAGTTGCAGCCGTTGTG
GAGAGACGGCAGATGATAAAGACTGTTTGGTTTGTGATTCATGTGAGGAG
ATATACCATGTGTCCTGTATTGAGCCGTCAGTGAAAGAAATAATACCCCA
CAAAAGCTGGTATTGTGCCAAGTGTACTGCTAAAGGGATTGGATCTCCAC
ATGAACATTGTGTACTATGTGAAAGGTTAAATGATGAACAGACCCCAAAT
GGCATAATTGGTGATGAAAGCTTTCCTACCATTAAGGAAACAAAAAATGA
ATTTGAAGAAAATTCAAATTGCACCTCTGATGGGATTGAAGGTTCTATAG
GTGAGAAAACAACACCCATTTGCAAAATTTGCAGAAATGAAGTGGATGGT
AATAAGAGAAAAAAGGTAAAAGTATGTGGCCATAGGTTTTGCCCCAACAA
GTACTACCATGTAAGGTGTTTAACAAAGAAGCAGTTAAAGTCATACGGTC
ACTGTTGGTACTGCCCTTCTTGTATATGCTGTGTTTGCTTAATTGATCGA
GATGATGATCAGATCGTTATCTGTGATGGCTGTGATCGTGGCTATCACCT
CTATTGCTTGACACCTCCACAGTCTTCTATTCCAAGCGGGAAATGGTTCT
GCAGACTCTGTGATGCTGGGATACAAGCAATTCACAAGGCTAAAAAGGCT
TATGAAAGTAACGAGCCAAGCAGAAAAGGGAGAGATGCTGCTAAGCCAAA
AGCTAAGCTTGATAAGAAACACAGAAATAAACGAGCAAGAGAATTGGAAA
GAGGTGGTGCAATGGACATGCTATTAACAGCAGCCAATACTCTGAATTTT
GAAGAGAAAGAGGCAGCAATCCAAATTGAGTCGCAGACAACATGAATTTT
GTGGAGATCTTTGTTTTATTTTACATTTGCTGTATTTTTGAATGACTGAT
ATTTTGGTAGGCTGTAAAACTGTTCAAGATCTCCTGACTTTTTTGATACA
TAACATGGAAAGACATGACTATAGAGGCTAAGCTCAAGGCATAATCTGAA
ACTGCTGTATTGTAAGTAGGTCAGATACTGTATTATGGACATGGTTTATA
TGAATTTTATATTTGACTGCTATTCTTGTTTCGTTC

protein sequence of Vigun09g160300.1_Vu_IT97K-499-35_v1.1

>Vigun09g160300.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g160300.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g160300.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=625bp
MDIEVTIKDYNCVAEEGQHLNSEAMNDEVAIAHANGVVGEVSVLKSEPFS
NGVAVGDKGGSGGVECLRTYKRRKKSSSRGKIQEQWVAGMATASGIADQN
VKKPCDLALGNTSDDCSQGQWGNIVLKHLYQSLGDGNGGVEGCIREALNP
KQNHATTVMETFIIEKDGKRCSSQSELLSHRTGKEANRHADVMCNGCSSE
LPDHGVTEMCQRVLSNILTTEKFRSLCKALLENFQGMKPESVFDFTIMNS
RMKEQAYEQSPALFLSDIQQVWGKLQDTGNEIVALAKSLSSISTTSYSEL
VGVSAPSTFREKQPSCNGELGFHVKPEQTQDCAMHRIGSCSRCGETADDK
DCLVCDSCEEIYHVSCIEPSVKEIIPHKSWYCAKCTAKGIGSPHEHCVLC
ERLNDEQTPNGIIGDESFPTIKETKNEFEENSNCTSDGIEGSIGEKTTPI
CKICRNEVDGNKRKKVKVCGHRFCPNKYYHVRCLTKKQLKSYGHCWYCPS
CICCVCLIDRDDDQIVICDGCDRGYHLYCLTPPQSSIPSGKWFCRLCDAG
IQAIHKAKKAYESNEPSRKGRDAAKPKAKLDKKHRNKRARELERGGAMDM
LLTAANTLNFEEKEAAIQIESQTT*

mRNA from alignment at Vu09:32772935..32781903-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vigun09g160300.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g160300.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g160300.1; organism=Vigna unguiculata; type=mRNA; length=8969bp; location=Sequence derived from: Vu09:32772935..32781903- (Vigna unguiculata
AAAAATGAAGTAATACAAGACACGGGTTGAAGCAGTAACAAAGAGAGTCA
GCGTGCAAAGGAAACTGGGAAGACGCGTCCTTTTGGTTTCGAAATTATTC
AGGTTCACATACATTTCTTCTTTTCTTTGGATTGACACACTTACATATGA
CAGAGTAGTTACTGCACTGCAACTCAGATTTCCACCACCCTAACCTCCTC
CTCCAACTTGCAGTTTTTGTTTTCGTTTTCAACTGTCATCATATTTTGCG
GGGTGTTTCGACTTCTAATAGCGTTTTTGAGGGTTTGGAGGCATTTGGGT
ATCCCAATCCTTACAAAATTTTGGATTTTTGAAGGTTGGCCGATGGGAAC
TGTGAACCCTAATTTTGTTCTTATACAGCGATTTATTGTTGTTATTTGTA
TTTTCTTTTTCTTTTTGGGGACTGAGGATGGAAGCTATGCAGATAAGGCT
GAATGTGATGATCGAGTCTAGTCTTTGAAAGATGAAGGCATGGATATTGA
GGTGACAATTAAAGATTATAATTGTGTTGCTGAAGAGGGACAACATTTGA
ATAGTGAAGCCATGAATGATGAGGTTGCAATTGCTCATGCTAACGGGGTT
GTTGGAGAGGTTAGTGTCCTGAAAAGTGAACCCTTTAGTAATGGGGTGGC
AGTTGGAGATAAAGGTGGCTCTGGTGGAGTGGAATGTTTGCGAACTTATA
AGAGACGTAAGAAGTCAAGTTCAAGAGGAAAAATTCAGGAACAATGGGTA
GCAGGCATGGCAACTGCAAGTGGAATAGCTGATCAGGTTTTCTAGCCTCT
TTGTTCAGACTTGTCAATTTGCCTAAGGGATTTGCTTAATTTGTCTATGC
TATTTGTTGCTTACATTTTTCTTGATTCATTGAGTTGTTTCCTACAAGTA
TTTTAATTTTGTGTTGACATGATTGGAAAGGGCACACACACGAGTAAAAC
CCTAAAAATTTGTTCACTAGTTTGTAAGATACATTGAGTGCTTTCAACAA
GTCATTGTAGCTAGTTTTTTTTGGGTGTGCATTAGTAATTAGTGATAGTT
GTTTTAGTCGTCAATGCTAAAAAAATGAAGAGTTTTCTTATTCTTTAGGC
TGTGTGCTAATGAATCAGGTTTTAGGATTTTGGTTACTCGCAGAGACTTA
TAAATCACGTAATATTTATAATATTTATAAAGCTGTGCGATTGATACAAG
ACAGAAAAATATCATCTGAAAAAGGCTAATGTTTAATTTGAAGTCAACGC
AACTTATGTACATATTTGTTCATTGATGTTCTTATTTTTTAGATGATTTG
TGGAGTTACTTGTTGTCCCATTTATATATCTTTCAGTATATTATGTATGC
TTATAAAGACTTGGTATTTCAGTAGAAGAGATGTAATACATTGATTGACG
ATTGACATATAGTTGCTTTAGGTTACTGTGAGTTCAATTTAAATCTTTAA
ATTGAATGACACAGAAAAATATAATTATGGCAACTTGCACTCACAAAACT
CTGGTTCATCAATTTTATATTAATTTTTTATATTACTATTCTCTGTTTTC
TGTTTTCCAAGAAGAGATTATCATGTACCTATGCTATTTTGGCTTAAATT
ATTATGCTGATAAATGGAGTTAAGTGCAATAAGATAAGTATATGTTTGCC
CACATATAAAGGATATATAATAACATATTGATTATGGACCATCCATGAAC
TTTGATGACAAAAGAACTAATTTAATAACTTTGCTCTATTCGTGTACGGC
ATTGCTGTTTGACACAATCCTCCTGTATCTACACATTTATTCTGGTTATA
CTAAAAATGGCGTCGGCCTAGTTGCAATCTATGTGCTATATATTTAAAAT
GCTAGGGATGTGATTTACTTTGTCAAATTCATAGTGGATTTATGTTGAAC
TTTGGTTGTACAAGGGACTACATTCTTGGCTTGTATAACGAATGGTGCAA
CTTTCAATGATCTTATTGATAATCAGATTACATCCAGGTTAACTATAAAA
TGATACCATATTGGTGTGCATGATATTTTTAATTCGAGGGTTGAGATGCT
AAATGTAGGATAGGTAACACTTGATAATTTTTTTTTCTTTGTAGTTTAGT
ATAATACAGCATGGGATGACTCACCCTGCCAGATAAATGTCCTGAACAAT
AAATACTGTTTCTTGGTGATATCTTCAACACTGTATTTTGATTGTTATTA
TTATTTTATTGCAGAATGTGAAGAAACCATGTGATCTAGCTTTAGGCAAT
ACTTCAGATGATTGTTCCCAAGGACAGTGGGGAAATATTGTACTAAAGCA
TTTATATCAGTCATTAGGTGATGGCAATGGTGGTGTGGAGGGGTGCATAA
GGGAAGCACTTAATCCTAAACAAAATCATGCCACTACTGTTATGGTGGGT
TCTTAAGTCGGAACAATATATATCCTGCTTACTCAACTTACCCAAAAGTA
ATTTTTTTGCCACTTTATTTATGTCTCTTCTTATTTTGTCTGCAGGAAAC
CTTTATAATTGAAAAAGATGGTAAAAGATGCTCTTCGCAATCTGAGCTGC
TTTCTCATAGAACAGGGAAGGAAGCTAATCGACATGCAGATGTCATGTGT
AATGGATGTTCCAGTGAATTACCTGACCATGGTGTGACTGAGATGTGTCA
ACGTGTTCTATCTAATATCTTAACCACAGAAAAATTTCGCTCACTGTGTA
AGGCTTTGCTTGAAAATTTCCAGGGAATGAAGCCTGAAAGTGTATTTGAC
TTTACCATCATGAATTCAAGGATGAAGGAACAAGCTTATGAACAATCACC
AGCACTCTTCTTGTCAGATATTCAACAGGTAAATTATGCAGTCTCTTCAA
TTGAACAATTTCTTTACTCATATGTATATGGTGATTGGTACAAAATTTAA
AAATTGTTGGTCGCCAAATATCTGGTTTACCTAGACCCATGACGTTGAGG
TCTAAGTCTTGTAGCTAATGTTTGCACAATATTGTTATCAATATAATATT
GCTCTTATTTCTAGTTATTTTAATTAATGGAACTTCAATCACGAAGATTT
TAGCCATCAAATAATGTTTGGAGTTTGATCAGCTCTTAACTCTTCAGTGA
ACTGATGGTTTCTTTGGACTGTAAACTTGGTTTCAGTTTGTTAGGACAAG
ACCTCCTATTAAGAAGGTCTATTAAAGAAGAAACAAGGGAAAAGGAAAAT
AAAACTTATTGTTTTAATTAAAACAGCTGTAAACTATGTTAGTAGTTATG
ATGTTGAGAAGCTTGTATTTATAGGTGTGTTTTGGGGTTTTGGGGTGAGG
AATTGGAAAATTAGTTAATAGTGAGAGGATCCTGGACCCTTGAAGTGCCA
ATGGTTTTCTGTAGATATTTCTGAAACTTCTATACGAAATTCTCAGATTC
TTCGTTTGGGTTTTCTTGTTTCTGAGTTTCTGATACAGTTTCTATAAACT
GGTATCAGAGCTCTTTCTGGGCTCTGTGGATTATTACACATGGTGACTAC
AAGAATGATAGAATCACAAGGGGAAGCATTGGAGAAGTGTTTAGCAAATG
GGCTTCAGTTACCATAGGGTTTTGAAGCAAGATTAGATGCAAGATTAACC
CAAATGGCAGCAAATTTGGAATCCTGACTTGTGCAGTAGAATTCACGCAT
GGCATGGTTGGAAAATATTGTGGAAAGATTTGTGAAAGGACGTGGGAAAG
GTGCTAGTGCTGCAAATTCTATGAATCAGAGAGTCTCTGATGAAGCTACA
CAAGAAGAATTAGCGAGTGCAACATTCTTGGGAAACAAGAATTGTGAAAA
ACGAAGGTAGTTGGACATTCCTGTATTTGAAGGAGAAGATATTATGGGAT
GGATAGGAAAAGTTGAGCACTATTTCTGCTTGAGAGGGGTACAAGAAGAG
GAGAGAATGGAAGCGGTTATGGTGGCGATGGAAGACAATGCACTATCTTG
GTTTTAATGGTGGGAAGCATGCAACCCAAATCAGGTTTGGTTTGAAGAAT
GCTCTTATTCAAAGATTCCAACCGGTTTTGATGGGAATCGTTGTTGGCCT
TGAAGCAGGAGACCTCATTGATCAAATTCATCACTCAGTTTGAAAGATTC
GCTGGATTCATTAAAGGGTTGGTTGAGCAGTATTTGATGAGGATTTTTTC
CAATGGGTTATGGGAAGAGATTAGAGAAGAATTAAGGCTGTACAAGACTA
ACAATCTCTCGGAAATGATGAACAAAGCCCATGCTATTGAAGGGAATAAT
ATAGTTGTAGCAAAGGTAGTAGGGGATTATAGAGACACAGGAGGGGGTAT
AGGAGTTTTCTTATTCAAAGAGGAACAATGAATAGCAGCTTGTCCAAGAT
CAATGGCAGCAGCTAATTCAGCACCACTCAATTTATTGGCAGAGGCAAAT
TCTTTTTCTCAATCTGGTACTAGCAAGGCCAGTAATGAGGTAAAGGCTAA
CAATGATGGTCACAACAGAGGCAACTTTAAAAGGTTGACATAGTCAAAGC
TTCAAGCAAAAATAAAAAAAAATAATGTTTTCGCTGTCATGAAAAATATA
GCGTGAATCATGTTTGCAAGATCAAACAACTCAATATCCTGATGTTAATA
AAAGGGCATGAGGAAGATGAGCACGGAAATGAAGGAAATTTCTGCAATTG
TGGAATCTTGATGAGCCAGGTATTGTTAGGACATGACCTCCTATTATGAA
GGTCTAATAAAGAAGAAACAAGGGAAAAGGAAAATACAGCTGATTGTTTT
AATTATAATTTAAAACAAATGTAAAATATGTTAGTAGTTATGCAGTTGAG
AAGTTTGTATATATAGGTGTGTTTTGGGGTTCTTGGGGGATGATTTGGAA
AATTATTGAATAGTGGGAGGATCCTGGACCCTCGAAGTGCCAGTGGTGTT
TCTGTAAAGATTTCTAAAACTTCTATACGAAATTCCCAGATTCTTTATTT
GAGTTCTCTTTCTTGTTTCTGAGTTTCTATCTAGTTTCTATAACAGTTAA
ACTTGGAAGAAGGGCAAAATAATTTCATATTTTACCAAATAATTTATTTG
TAAAACTTTGTTGTGTCAGGTTGTTGGGTTTAGGGTTTGAAAAACTGATT
ATTTATGATATATTTATATCTATATCTATATATAGGCAGAGGATAGTGTG
CAACTGTGCTAGTACGCATGCATAGTTGACAAAATGATGTTATTTTTTAT
GGTTTGTACTTGTATTTGTACACGGTAGTGCTTTCAAGTATTTACTCGAG
TTTCTTGATATTCTTCTTTCATGTTGCTTGGGTGGGCTCATGTGTGCATT
TCATGTACCTTTTTCCTTTTGACTAATAGGTATGATTTGGGAAAAAGTCT
AGTAGTTCTTAATCTCAATTATAAGAATCTTAGGATTCATGATTAGAATC
TTTTGAGTCAGCTACATATCGATTTGTAGGAAGAATCTTAAATGATTTTG
TATGTCATGATATACATGAATAAATTTGTGCAAGTTTGTATCATCAAATA
TGAATTACATGATTCAATAATTCATTATTATATGGTTTTTTCTTTCATCA
GTAATCTTATATTGTCCATGAAAAGGAATTCGATGAGCAGTTTTTGAATT
TATCTTTTTCGATACTTCCATATTCCCACTACTTTATTTGTCATCCACTT
TTTCAACGTATGCACTTTATTTGGTTATTACTTTGCTATTTAACTGAAAT
CGATGAGGCTTCACAAACTCAACTGTTTGGTGTATTAATGGTATAACCAT
TGCACAAACTAACCATTGTACTTTCTGGTTGTTTTTGTATTAATTATACA
TTTAGGTTTGGGGAAAGCTTCAAGACACTGGTAACGAGATTGTTGCTCTT
GCCAAGAGCCTATCCAGCATTTCAACAACTTCCTACTCAGAGCTGGTAAA
AAAATTCTTTCAAAGCTCTTAAGTTTCATGATCTGTTTTGATTATGGATT
TTATTTTCTTCTTCCTGTGTATGTTGCTACTATCTGCTTTCCTTTTATTC
AAACCCTAGTTTTTCTTTACCTCTAGGTAGGAGTTTCAGCACCGAGCACA
TTTCGAGAGAAGCAGCCGGTAAGAGTTTTATAACTTTGATCTGATGTTTC
TTTAGATCATCATTAAGTTGTCAGATTTTCTGTCTTATCATCAAAATTTG
TTTTATGTTATGATATAGTTTGATACACATTGTTTTTGTTGTGATAAGTA
CAAATTATTGGATAGATGATATTTTGAGAAAATATTAAATAATACTGTAA
ATGCAATCCATCTTACCTTTTGATGGCTGGCAATCAGATAGGTATATGAT
TGTATAAAATTGAAAGGATTATCAAAGAAAAGTTTAAGAAAGTTTGCACA
TGGCATGGTGGAGACAAAATCGTATCTTTCCTTTTTTTGCTCTGTTTCGC
TGTAGCTGTAACACTTGGAGTGGGCAATTTCTGTTTCTGTTCATCAGCTT
TTGTTTGTCTGTTTTGCTGGCCATAGACCCGAAATTTCTTGGTTATGTGC
ATGTTTATCTTTTGGAAAATGTTATGTATGAAGCATGAAGGCATAGTTAT
ATCCCCATATGTGAACATACAATAATTATGTTGAAAATGTTTTAGTTAGA
TCACTATATTTTCTGAAATGGTCTGATAGCCAGCCATGCCTTGAGAGCAG
CGGGGCCAAAAGAAAAACATTGTCGCAGGCCCAATTAGCTGAAAGCTTAT
ATTGAGTAGAATCTGGTTGCAGAGGAGTGGGTAGTATCAATGGGACCGTT
ATATCTTCTGGTATCAAGAAGTCATCCTGACACGAGGACATGCGGAATAA
AAAACCTCAGTATGTATTAAGATCAATCAACGAGTGTTTGAGTTTGTTTA
CACAACATAAGAAAAATGGGTAGAATTACTGAAAATAAAATCTCCATCGT
TTACTAGAAATAGAAAATTCAGTGTATATGAAATTTGAGCCAGGTACTGC
AGCAGCATCAAAGAACCTGATGCAATTGTTCAGAAAAGAATCAGAATGTG
GAACTCAGAGGGAATATAGAGATGCAGAACAGAGAAATTTCAGAGAAAGC
ATACCATATGCATAGCCTCCCCCTAGAACACGTTGTTCCTTAGAAATACA
TTCTCTTTCTTACATCTCATGCTTTTCCTGTGCCCCTTTTCGTATGGATC
ATGTGTCATGTTCTTGAGTAACTGATTTTCCCTTGACGTCCAGCTCATCA
TTTATGATACTCATTGTTTTTGCACGTTACACATCCCTATTGGACTGGAA
ACGAATGAAATTACCCTAATTTAGTCTGTTTATTTTCTTTCTGCTTTAGT
GGAACCTAGTTGTGGGTCCTTGGTTCCTTCTTTCATTTTTATAACAGGCT
AAAATAGGGTAATTTCATTCACGTCCAATCCAATACAGGATAGAAGACCT
AACAATTCTATTGATACTACCCTACACCTGTACACTCCATATTCTATTCA
ATATAAGCTTTGAACCAATTGGGCCTGCTGCACGCCCTAAAGGCCTGCCT
GGCTATCATGGTCTAATTCAGCTTTATTTGCCAAAATTTTCTAAATGCAT
AATGGGATAGACTACTTGAAATTTAAGATAATGGTGCACTTCTGGTAAGT
GGTTCTAAGAACTAATTGTATCTATTTGAAACATGCTAGATTTTGCTAAC
TTTTGTTATGAATATGTTTAGAATGTTGCACTTGAAAATGCTTGCCATAT
ATCTGTACCGATTTCATTTGGTATTGTTAGTGTTTTTCTTGAAATGTTTA
TTAAAATGGTCTTGCAAATTGATTTAATCTTGTTACTTCAAACAGTCCTG
CAACGGAGAATTGGGCTTTCACGTGAAGCCAGAACAGACGCAAGACTGTG
CTATGCACAGAATCGGCAGTTGCAGCCGTTGTGGAGAGACGGCAGATGAT
AAAGACTGTTTGGTTTGTGATTCATGTGAGGAGATATACCATGTGTCCTG
TATTGAGCCGTCAGTGAAAGAAATAATACCCCACAAAAGCTGGTATTGTG
CCAAGTGTACTGCTAAAGGGATTGGATCTCCACATGAACATTGTGTACTA
TGTGAAAGGTTAAATGATGAACAGACCCCAAATGGCATAATTGGTGATGA
AAGCTTTCCTACCATTAAGGAAACAAAAAATGAATTTGAAGAAAATTCAA
ATTGCACCTCTGATGGGATTGAAGGTTCTATAGGTGAGAAAACAACACCC
ATTTGCAAAATTTGCAGAAATGAAGTGGATGGTAATAAGAGAAAAAAGGT
AAAAGTATGTGGCCATAGGTTTTGCCCCAACAAGTACTACCATGTAAGGT
GTTTAACAAAGAAGCAGTTAAAGTCATACGGTCACTGTTGGTACTGCCCT
TCTTGTATATGCTGTGTTTGCTTAATTGATCGAGATGATGATCAGATCGT
TATCTGTGATGGCTGTGATCGTGGCTATCACCTCTATTGCTTGACACCTC
CACAGTCTTCTATTCCAAGCGGGAAATGGTTCTGCAGACTCTGTGATGCT
GGGATACAAGCAATTCACAAGGCTAAAAAGGCTTATGAAAGTAACGAGCC
AAGCAGAAAAGGGAGAGATGCTGCTAAGCCAAAAGCTAAGCTTGATAAGA
AACACAGAAATAAACGAGCAAGAGAATTGGAAAGAGGTGGTGCAATGGAC
ATGCTATTAACAGCAGCCAATACTCTGAATTTTGAAGAGAAAGAGGCAGC
AATCCAAATTGAGTCGCAGACAACATGAATTTTGTGGAGATCTTTGTTTT
ATTTTACATTTGCTGTATTTTTGAATGACTGATATTTTGGTAGGCTGTAA
AACTGTTCAAGATCTCCTGACTTTTTTGATACATAACATGGAAAGACATG
ACTATAGAGGCTAAGCTCAAGGCATAATCTGAAACTGCTGTATTGTAAGT
AGGTCAGATACTGTATTATGGACATGGTTTATATGAATTTTATATTTGAC
TGCTATTCTTGTTTCGTTC

Coding sequence (CDS) from alignment at Vu09:32772935..32781903-

>Vigun09g160300.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g160300.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g160300.1; organism=Vigna unguiculata; type=CDS; length=1875bp; location=Sequence derived from: Vu09:32772935..32781903- (Vigna unguiculata
ATGGATATTGAGGTGACAATTAAAGATTATAATTGTGTTGCTGAAGAGGG
ACAACATTTGAATAGTGAAGCCATGAATGATGAGGTTGCAATTGCTCATG
CTAACGGGGTTGTTGGAGAGGTTAGTGTCCTGAAAAGTGAACCCTTTAGT
AATGGGGTGGCAGTTGGAGATAAAGGTGGCTCTGGTGGAGTGGAATGTTT
GCGAACTTATAAGAGACGTAAGAAGTCAAGTTCAAGAGGAAAAATTCAGG
AACAATGGGTAGCAGGCATGGCAACTGCAAGTGGAATAGCTGATCAGAAT
GTGAAGAAACCATGTGATCTAGCTTTAGGCAATACTTCAGATGATTGTTC
CCAAGGACAGTGGGGAAATATTGTACTAAAGCATTTATATCAGTCATTAG
GTGATGGCAATGGTGGTGTGGAGGGGTGCATAAGGGAAGCACTTAATCCT
AAACAAAATCATGCCACTACTGTTATGGAAACCTTTATAATTGAAAAAGA
TGGTAAAAGATGCTCTTCGCAATCTGAGCTGCTTTCTCATAGAACAGGGA
AGGAAGCTAATCGACATGCAGATGTCATGTGTAATGGATGTTCCAGTGAA
TTACCTGACCATGGTGTGACTGAGATGTGTCAACGTGTTCTATCTAATAT
CTTAACCACAGAAAAATTTCGCTCACTGTGTAAGGCTTTGCTTGAAAATT
TCCAGGGAATGAAGCCTGAAAGTGTATTTGACTTTACCATCATGAATTCA
AGGATGAAGGAACAAGCTTATGAACAATCACCAGCACTCTTCTTGTCAGA
TATTCAACAGGTTTGGGGAAAGCTTCAAGACACTGGTAACGAGATTGTTG
CTCTTGCCAAGAGCCTATCCAGCATTTCAACAACTTCCTACTCAGAGCTG
GTAGGAGTTTCAGCACCGAGCACATTTCGAGAGAAGCAGCCGTCCTGCAA
CGGAGAATTGGGCTTTCACGTGAAGCCAGAACAGACGCAAGACTGTGCTA
TGCACAGAATCGGCAGTTGCAGCCGTTGTGGAGAGACGGCAGATGATAAA
GACTGTTTGGTTTGTGATTCATGTGAGGAGATATACCATGTGTCCTGTAT
TGAGCCGTCAGTGAAAGAAATAATACCCCACAAAAGCTGGTATTGTGCCA
AGTGTACTGCTAAAGGGATTGGATCTCCACATGAACATTGTGTACTATGT
GAAAGGTTAAATGATGAACAGACCCCAAATGGCATAATTGGTGATGAAAG
CTTTCCTACCATTAAGGAAACAAAAAATGAATTTGAAGAAAATTCAAATT
GCACCTCTGATGGGATTGAAGGTTCTATAGGTGAGAAAACAACACCCATT
TGCAAAATTTGCAGAAATGAAGTGGATGGTAATAAGAGAAAAAAGGTAAA
AGTATGTGGCCATAGGTTTTGCCCCAACAAGTACTACCATGTAAGGTGTT
TAACAAAGAAGCAGTTAAAGTCATACGGTCACTGTTGGTACTGCCCTTCT
TGTATATGCTGTGTTTGCTTAATTGATCGAGATGATGATCAGATCGTTAT
CTGTGATGGCTGTGATCGTGGCTATCACCTCTATTGCTTGACACCTCCAC
AGTCTTCTATTCCAAGCGGGAAATGGTTCTGCAGACTCTGTGATGCTGGG
ATACAAGCAATTCACAAGGCTAAAAAGGCTTATGAAAGTAACGAGCCAAG
CAGAAAAGGGAGAGATGCTGCTAAGCCAAAAGCTAAGCTTGATAAGAAAC
ACAGAAATAAACGAGCAAGAGAATTGGAAAGAGGTGGTGCAATGGACATG
CTATTAACAGCAGCCAATACTCTGAATTTTGAAGAGAAAGAGGCAGCAAT
CCAAATTGAGTCGCAGACAACATGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001965	Znf_PHD
IPR013083	Znf_RING/FYVE/PHD
IPR019787	Znf_PHD-finger
IPR019786	Zinc_finger_PHD-type_CS
IPR001841	Znf_RING
IPR011011	Znf_FYVE_PHD

Search form

Vigun09g160300.1