Vigun09g160900.3
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: TCHQD_ARATH (Glutathione S-transferase TCHQD OS=Arabidopsis thaliana OX=3702 GN=TCHQD PE=2 SV=1) HSP 1 Score: 381.333 bits (978), Expect = 1.390e-133 Identity = 179/267 (67.04%), Postives = 229/267 (85.77%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVIGRYFDGWKKHKTLVKTWCFVRIRSLLKRY 801 MQLYHHP+ +DSQ+VRLALEEK IDYTS+HVNP+TGK++D SFF+MNP +LPVF+NGSHI+ TI+II+Y+ERIA SSG E+ + N+EV+EWM+K++EW K F+L+++P+ R+YVSKFLR VVIARM+E P+LA AYHRKL+EAY TE+++KD L RSK+HL+RLLDE E +L T YLAG EF+MADVMLIPVL+RL LLDLE+EYI+ R N+AEYW LV++RPSY+KVIGRYF+GW+K+ TLVKTW FVR+RSLL++Y Sbjct: 1 MQLYHHPYSIDSQRVRLALEEKGIDYTSYHVNPITGKHMDPSFFRMNPNAKLPVFRNGSHIILDTIEIIEYLERIAEVSSGIEDATF-NREVVEWMRKIREWESKLFTLAHIPDNRRLYVSKFLRMVVIARMAESPDLASAYHRKLREAYDTEDKLKDPGALRRSKDHLLRLLDEVETKLEGTTYLAGNEFSMADVMLIPVLARLSLLDLEEEYISSRKNLAEYWALVRRRPSYKKVIGRYFNGWRKYATLVKTWMFVRVRSLLRKY 266
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: PCPC_SPHCR (Tetrachloro-P-hydroquinone reductive dehalogenase OS=Sphingobium chlorophenolicum OX=46429 GN=pcpC PE=1 SV=3) HSP 1 Score: 82.0333 bits (201), Expect = 3.057e-17 Identity = 59/249 (23.69%), Postives = 118/249 (47.39%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVN-PVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLS--NVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVIGRYFDGWK 738 + LY++ + S K RLA+EE +DY V+ +N + + ++N +P G ++ + +I+ +E + G NK ++W QK + N + + VP + +++ R A + PEL Y + D+D + +++ L + LDE + L++ P++AG +++AD+M +L+R+ +L++ +I+ RPN+ Y+ ++ R S+ R WK Sbjct: 4 VSLYNYTMSICSMKTRLAMEEFGVDYDDKQVDIGFALENFEPDYVRLNEKAVVPTLVVGDRVVTNSYNIV--LEAAKLGKVGIPADPVENKAALDWFQKGDQVNFQVITYGHKGVPRGDELLIARRERAKEYA--EKYPELRSIYQAAHDRIVEHGNCAYDADTVAQAEVDLQKRLDELDAHLADKPFIAGSNYSIADIMWTVLLARIEMLNM-TAWISERPNLLAYYQRMKARRSFE--TARVMPNWK 245
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GDAP1_HUMAN (Ganglioside-induced differentiation-associated protein 1 OS=Homo sapiens OX=9606 GN=GDAP1 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.439e-14 Identity = 74/271 (27.31%), Postives = 121/271 (44.65%), Query Frame = 1 Query: 7 LYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLS--------------NVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSK-EHLVRLLDEAEKQLSET-----------------PYLAGQEFTMADVMLIPVLSRLVLLDL-EKEYITG-RPNIAEYWVLVQQRPSYRKVIG 717 LYH SQKVRL + EK++ H V+ ++ + F ++N G +PV +G +I+ + II Y+E+ F +KE + + +VQ + SL V Y + +R + SE +LA + L+EAY +++ S +L ++L ++LDE EK L + P+L G+ FT+ADV L L RL L + + G RPN+ Y+ V +R ++ KV+G Sbjct: 28 LYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQ--TFLDERTPRLMPDKESM-YYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRSQIGNTESELKKLA-EENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGQQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGNGKRPNLETYYERVLKRKTFNKVLG 294
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GDAP1_MOUSE (Ganglioside-induced differentiation-associated protein 1 OS=Mus musculus OX=10090 GN=Gdap1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.688e-13 Identity = 71/272 (26.10%), Postives = 120/272 (44.12%), Query Frame = 1 Query: 7 LYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQE---------------WNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSK-EHLVRLLDEAEKQLSET-----------------PYLAGQEFTMADVMLIPVLSRLVLLDL-EKEYITG-RPNIAEYWVLVQQRPSYRKVIG 717 LYH SQKVRL + EK++ H V+ ++ + F ++N G +PV +G +I+ + II Y+E+ + + +Q +E +P+ S +P Y + +R + SE +LA + L+EAY +++ S +L ++L ++LDE EK L + P+L G+ FT+ADV L L RL L + + G RPN+ Y+ V +R ++ KV+G Sbjct: 28 LYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSAGEVPVLVHGENIICEATQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIP----AYATTRIRSQIGNTESELKKLA-EENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPEEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLETYYERVLKRKTFNKVLG 294
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GSTF2_ARATH (Glutathione S-transferase F2 OS=Arabidopsis thaliana OX=3702 GN=GSTF2 PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 3.544e-12 Identity = 59/237 (24.89%), Postives = 104/237 (43.88%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKV 711 ++++ HP + +++V +AL EK++D+ HV G++ F NP G++P F++G L+++ I QYI + +Q + +Y ++ + V V ++++ Y EA EE K L ++LD E +L E YLAG+ FT+ D+ IP + L L K+ T RP + E+ + +RP+ KV Sbjct: 4 IKVFGHPASIATRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAH------------RYENQGTNLLQTDSKNISQYAIMA-----IGMQVEDHQFDPVASKLAFEQIFKSIYGLTTDEAVVAEEEAK-----------LAKVLDVYEARLKEFKYLAGETFTLTDLHHIPAIQYL-LGTPTKKLFTERPRVNEWVAEITKRPASEKV 211
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GSTF6_ARATH (Glutathione S-transferase F6 OS=Arabidopsis thaliana OX=3702 GN=GSTF6 PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 1.765e-11 Identity = 59/243 (24.28%), Postives = 107/243 (44.03%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPEL--AGA---YHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVI 714 ++++ HP +++V +AL EK++D+ HV G++ F NP G++P F++G ++++ I QYI E++ K +L + K + + + E E G+ + + LK Y D V+ + L ++LD E +L E+ YLA FT+ D+ IPV+ L L K+ RP+++ + + RPS +KV+ Sbjct: 4 IKVFGHPASTATRRVLIALHEKNVDFEFVHVELKDGEHKKEPFILRNPFGKVPAFEDGDFKIFESRAITQYI--------------------------AHEFSDKGNNL--------LSTGKDMAIIAMGIEIESHEFDPVGSKLVWEQVLKPLYGM---TTDKTVVEEEEAKLAKVLDVYEHRLGESKYLASDHFTLVDLHTIPVIQYL-LGTPTKKLFDERPHVSAWVADITSRPSAQKVL 208
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GSTF3_ARATH (Glutathione S-transferase F3 OS=Arabidopsis thaliana OX=3702 GN=GSTF3 PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.196e-11 Identity = 60/238 (25.21%), Postives = 106/238 (44.54%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVI 714 ++++ HP +++V +AL EK++D+ HV G++ F NP G++P F++G L+++ I QYI + ++ K N +++ ++ I V V ++++ Y +A EE K + VL D E +L E YLAG+ FT+ D+ IPV+ L L K+ T RP + E+ + +RP+ KV+ Sbjct: 4 IKVFGHPASTSTRRVLIALHEKNLDFELVHVELKDGEHKKEPFLSRNPFGQVPAFEDGDLKLFESRAITQYIAH---------RYENQGTNLLPADSK----NIAQYAIMSI----GIQVEAHQFDPVASKLAWEQVFKFNYGLNTDQAVVAEEEAKLAKVL-----------DVYEARLKEFKYLAGETFTLTDLHHIPVIQYL-LGTPTKKLFTERPRVNEWVAEITKRPASEKVL 212
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus OX=35626 PE=1 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 9.263e-11 Identity = 57/241 (23.65%), Postives = 100/241 (41.49%), Query Frame = 1 Query: 1 MQLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIE--WMQ-KVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVI 714 M+L+ +V L+EK +D+ VN G + F +NP G++P F++G L+++ I QYI + K I WM+ + Q+++P SK +VI M V D + ++E L ++LD E +L ++ YL G FT+AD+ P ++ L+ + K RP+++ + + RP++ K I Sbjct: 3 MKLHGPAMSPAVMRVIATLKEKDLDFELVPVNMQAGDHKKEPFITLNPFGQVPAFEDGDLKLFESRAITQYIAHTYADKGNQLLANDPKKMAIMSVWMEVESQKFDP--------------VASKLTFEIVIKPMLGM--------------------VTDDAAVAENEEKLGKVLDVYESRLKDSKYLGGDSFTLADLHHAPAMNYLMGTKV-KSLFDSRPHVSAWCADILARPAWSKAI 208
BLAST of Vigun09g160900.3 vs. DB:Swiss
Match: GSTF4_ARATH (Glutathione S-transferase F4 OS=Arabidopsis thaliana OX=3702 GN=GSTF4 PE=2 SV=1) HSP 1 Score: 55.4546 bits (132), Expect = 8.560e-8 Identity = 59/256 (23.05%), Postives = 104/256 (40.62%), Query Frame = 1 Query: 4 QLYHHPFDLDSQKVRLALEEKSIDYTSHHVNPVTGKNLDSSFFKMNPGGRLPVFQNGSHILYKTIDIIQYIERIAVFXXXXXXXXXXNKEVIEWMQKVQEWNPKYFSLSNVPEKYRIYVSKFLRRVVIARMSECPELAGAYHRKLKEAYQTEERVKDSDVLIRSKEHLVRLLDEAEKQLSETPYLAGQEFTMADVMLIPVLSRLVLLDLEKEYITGRPNIAEYWVLVQQRPSYRKVIGRYF--DGWKKHKTLVKTW 765 +++ PF ++++V L EK + Y V TG++ F +NP G++PVF++GS LY++ I QYI + S N E M + W + A + P + + +K Y E D ++ ++ L ++L+ EK+L E+ +LA FT+ D+ +P + +Y+ G P L ++R RK + + WK K+W Sbjct: 28 KVHGDPFSTNTRRVLAVLHEKRLSYEPITVKLQTGEHKTEPFLSLNPFGQVPVFEDGSVKLYESRAITQYI----AYVHSSRGTQLLNLRSHETMATLTMWME-----------------------IEAHQFDPPASKLTWEQVIKPIYGLE---TDQTIVKENEAILEKVLNIYEKRLEESRFLACNSFTLVDLHHLPNI----------QYLLGTPTKK----LFEKRSKVRKWVDEITSREAWKMACDQEKSW 239 The following BLAST results are available for this feature:
BLAST of Vigun09g160900.3 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 9
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g160900.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g160900.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g160900.3; organism=Vigna unguiculata; type=mRNA; length=1525bpback to top protein sequence of Vigun09g160900.3_Vu_IT97K-499-35_v1.1 >Vigun09g160900.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g160900.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g160900.3_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=268bpback to top mRNA from alignment at Vu09:32832794..32836115+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g160900.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g160900.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g160900.3; organism=Vigna unguiculata; type=mRNA; length=3322bp; location=Sequence derived from: Vu09:32832794..32836115+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:32832794..32836115+ >Vigun09g160900.3_Vu_IT97K-499-35_v1.1 ID=Vigun09g160900.3_Vu_IT97K-499-35_v1.1; Name=Vigun09g160900.3; organism=Vigna unguiculata; type=CDS; length=804bp; location=Sequence derived from: Vu09:32832794..32836115+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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