Vigun09g161200.1

Transcript Overview
NameVigun09g161200.1
Unique NameVigun09g161200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1360
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:32858200..32861965 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL369Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL383Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL493Pisum sativum Cameor genome v1aPisum sativum
psvuL646Pisum sativum Cameor genome v1aPisum sativum
pvvuL064Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL456Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL561Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL579Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL802Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL812Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0631Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0635Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL441Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL443Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0943Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0771Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1209Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL726Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR673Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR692Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR695Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL327Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL335Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL311Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL466Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL440Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL400Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL466Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL422Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL428Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL584Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR459Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL320Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL409Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL411Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL614Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL334Cicer arietinum
carvuL416Cicer arietinum
carvuL419Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL343Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL438Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR769Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR771Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR813Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR827Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL301Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL316Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL061Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL708Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL717Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR513Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Cc_v2.0_11535.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr01.452Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
XM_058927379.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr09.888Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
rna-TanjilR_19933Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13936.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
jg53896.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigst.02G105700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va04G054000.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Cr_13969.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigst.03G131900.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.2g122800.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vigan.03G211800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigan.02G141200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Phvul.001G068200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.2g100440.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Va07G057670.2Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan07g224600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
LR48_mrnaVigan04g172300Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Cr_08011.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_03887Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat05G0257300-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_13111Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr09.2067Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_004498302.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-KK1_009205Cajanus cajan Asha genome v1.0Cajanus cajan
evm.model.Chr08.10Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_02G01157.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vum_03G01457.1Vigna umbellata FF25 genome v1.0Vigna umbellata
rna-XM_014648736.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Phvul.009G130000.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g072700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g072700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g161200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g161200Vigun09g161200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g161200.1Vigun09g161200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g161200.1_Vu_IT97K-499-35_v1.1Vigun09g161200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g161200.1.v1.1.CDS.7Vigun09g161200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.6Vigun09g161200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.5Vigun09g161200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.4Vigun09g161200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.3Vigun09g161200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.2Vigun09g161200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g161200.1.v1.1.CDS.1Vigun09g161200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g161200.1.v1.1.three_prime_UTR.1Vigun09g161200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g161200.1.v1.1.five_prime_UTR.1Vigun09g161200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: MADS2_PETHY (Floral homeotic protein PMADS 2 OS=Petunia hybrida OX=4102 GN=PMADS2 PE=2 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 2.719e-87
Identity = 125/176 (71.02%), Postives = 149/176 (84.66%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQHLALESVGNM 528
            MGRGKIEIKRIENSSNRQVTYSKR+NGI+KKAKEI+VLCDA+VSLIIFG SGKMHEY SPSTTL D+LD YQ+ SG+ LWDAKHENLSNEIDR+KKEND+MQ++LRHLKGEDI SLN+KELM LE+ L NGL+ +  K+ E+ RM ++N +ILEE++K+L + L Q       GNM
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGIIKKAKEITVLCDAKVSLIIFGNSGKMHEYCSPSTTLPDMLDGYQKTSGRRLWDAKHENLSNEIDRIKKENDNMQVKLRHLKGEDINSLNHKELMVLEEGLTNGLSSISAKQSEILRMVRKNDQILEEEHKQLQYALHQKEMAAMGGNM 176
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus OX=4151 GN=GLO PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 4.129e-87
Identity = 120/166 (72.29%), Postives = 146/166 (87.95%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQ 498
            MGRGKIEIKRIENSSNRQVTYSKR+NGI+KKAKEISVLCDA VS+IIF +SGKMHE+ SPSTTL+D+LD Y + SGK LWD KHE+L NEI+R+KKENDSMQIELRHLKGEDIT+LNYKELM LEDALENG + ++ K++E  RM +++ +++EE+N+ L F L+Q
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGKRLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLEDALENGTSALKNKQMEFVRMMRKHNEMVEEENQSLQFKLRQ 166
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum OX=4097 GN=GLO PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 2.451e-79
Identity = 114/166 (68.67%), Postives = 145/166 (87.35%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQ 498
            MGRGKIEIKRIENSSNRQVTYSKR+NGILKKAKEISVLCDA+VS+IIF +SGKMHE+   ST+L+DILD+Y + +G+ LWDAKHENL NEI+++KK+ND+MQIELRHLKGEDITSLN++ELM LEDAL+NGL  +R K+ ++ RM ++  + +EE+  +LN+ L+Q
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--SSTSLVDILDQYHKLTGRRLWDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLLRMMRKKTQSMEEEQDQLNWQLRQ 164
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida OX=4102 GN=FBP1 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.737e-78
Identity = 116/166 (69.88%), Postives = 143/166 (86.14%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQ 498
            MGRGKIEIKRIENSSNRQVTYSKR+NGILKKAKEISVLCDA+VS+IIF +SGKMHE+   ST+L+DILD+Y + +G+ L DAKHENL NEI+++KK+ND+MQIELRHLKGEDITSLN++ELM LEDALENGL  +R K+ EV RM ++  + +EE+  +LN  L+Q
Sbjct:    1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEF--SSTSLVDILDQYHKLTGRRLLDAKHENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVLRMMRKKTQSMEEEQDQLNCQLRQ 164
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: PIST_ARATH (Floral homeotic protein PISTILLATA OS=Arabidopsis thaliana OX=3702 GN=PI PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.338e-74
Identity = 108/167 (64.67%), Postives = 140/167 (83.83%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQH 501
            MGRGKIEIKRIEN++NR VT+SKR+NG++KKAKEI+VLCDA+V+LIIF ++GKM +Y  PS  L  +LD+YQ+ SGK LWDAKHENLSNEIDR+KKENDS+Q+ELRHLKGEDI SLN K LMA+E A+E+GL+ VR+ ++E+    +RN K++ E+ ++L F LQQ 
Sbjct:    1 MGRGKIEIKRIENANNRVVTFSKRRNGLVKKAKEITVLCDAKVALIIFASNGKMIDYCCPSMDLGAMLDQYQKLSGKKLWDAKHENLSNEIDRIKKENDSLQLELRHLKGEDIQSLNLKNLMAVEHAIEHGLDKVRDHQMEILISKRRNEKMMAEEQRQLTFQLQQQ 167
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS2 PE=2 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 1.082e-68
Identity = 106/171 (61.99%), Postives = 139/171 (81.29%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNF-LLQQHLAL 510
            MGRGKIEIKRIENS+NRQVT+SKR++GILKKA+EISVLCDA+V ++IF ++GK+++Y SP T+L  IL++YQ  SGK LWD KH++LS EIDR+KKEND+MQIELRHLKGED+ SL  KEL+ +E+AL+NG+  V +K ++      R  K+LE++NK L F L QQ +AL
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGIVNVNDKLMDHWERHVRTDKMLEDENKLLAFKLHQQDIAL 171
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS4 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 9.363e-68
Identity = 104/171 (60.82%), Postives = 136/171 (79.53%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTT-----LIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNGKILEEQNKELNFLLQQ 498
            MGRGKIEIKRIENS+NRQVT+SKR+ GILKKA+EI VLCDA+V ++IF ++GK+ +Y +P TT     L  IL++YQ  SGK LWD KH++LS EIDR+KKEND+MQIELRH+KGED+ SL  KEL+A+E+AL NG   +R+K ++  RM KRN K+LE+++K L F + Q
Sbjct:    1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQ 171
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS16 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 4.813e-48
Identity = 74/142 (52.11%), Postives = 103/142 (72.54%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEV 426
            MGRGKIEIKRIEN++NRQVTYSKR+ GI+KKA+E++VLCDAQV++I+F ++GK HE+ SPST +  I DRYQ+A G +LW  ++EN+   +  LK  N +++ E+R   GED+  L + EL  LE  ++  L  VR +K  V
Sbjct:    1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGKYHEFCSPSTDIKGIFDRYQQAIGTSLWIEQYENMQRTLSHLKDINRNLRTEIRQRMGEDLDGLEFDELRGLEQNVDAALKEVRHRKYHV 142
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: GGM13_GNEGN (MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN=GGM13 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.959e-47
Identity = 85/178 (47.75%), Postives = 123/178 (69.10%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRM----FKRNGKILEEQNKELNFLL-QQHLALESV 519
            MGRGKIEIKRIEN++NRQVT+SKR+ G+LKKA E+SVLCDA++ LIIF +SGK+ EY S S+++  I++RYQ+ SG  + +  +++L  E+ R+K EN+ +Q  +R + GED+TSL   EL  L   LE+  + VR +K ++        +R  +ILE+QN  L  LL +Q  A+E V
Sbjct:    1 MGRGKIEIKRIENTTNRQVTFSKRRGGLLKKAHELSVLCDAELGLIIFSSSGKLFEYSSASSSMKKIIERYQKVSGARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELHHLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHLCRLLAEQQAAVEGV 178
[Close]
BLAST of Vigun09g161200.1 vs. DB:Swiss
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida OX=4102 GN=PMADS1 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 9.433e-44
Identity = 68/142 (47.89%), Postives = 104/142 (73.24%), Query Frame = 1 
Query:    1 MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGASGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDSMQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEV 426
            M RGKI+IKRIEN +NRQVTYSKR+NG+ KKA E++VLCDA+VS+I+  ++GK+HE+ISPS T   + D YQ+  G  LW++ +E +  ++ +LK+ N +++ E+R   GE +  LNY++L  L + ++N L  +RE+K +V
Sbjct:    1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVGVDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEELMENVDNSLKLIRERKYKV 142
The following BLAST results are available for this feature:
BLAST of Vigun09g161200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
MADS2_PETHY2.719e-8771.02Floral homeotic protein PMADS 2 OS=Petunia hybrida... [more]
GLOB_ANTMA4.129e-8772.29Floral homeotic protein GLOBOSA OS=Antirrhinum maj... [more]
GLOB_TOBAC2.451e-7968.67Floral homeotic protein GLOBOSA OS=Nicotiana tabac... [more]
FBP1_PETHY1.737e-7869.88Floral homeotic protein FBP1 OS=Petunia hybrida OX... [more]
PIST_ARATH7.338e-7464.67Floral homeotic protein PISTILLATA OS=Arabidopsis ... [more]
MADS2_ORYSJ1.082e-6861.99MADS-box transcription factor 2 OS=Oryza sativa su... [more]
MADS4_ORYSJ9.363e-6860.82MADS-box transcription factor 4 OS=Oryza sativa su... [more]
MAD16_ORYSJ4.813e-4852.11MADS-box transcription factor 16 OS=Oryza sativa s... [more]
GGM13_GNEGN1.959e-4747.75MADS-box protein GGM13 OS=Gnetum gnemon OX=3382 GN... [more]
MADS1_PETHY9.433e-4447.89Floral homeotic protein PMADS 1 OS=Petunia hybrida... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..111
NoneNo IPR availableCOILSCoilCoilcoord: 153..173
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 71.2
coord: 3..23
score: 69.24
coord: 38..59
score: 51.97
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
e-value: 9.3E-40
score: 148.1
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
e-value: 2.8E-23
score: 81.2
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 1..61
score: 31.931
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 82..161
e-value: 8.2E-20
score: 70.8
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 84..170
score: 14.431
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 13..78
e-value: 3.5E-24
score: 86.1
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 2..96
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 2..80
e-value: 4.53077E-41
score: 131.135

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g161200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g161200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g161200.1; organism=Vigna unguiculata; type=mRNA; length=1360bp
CTCCAATTCATCATATCTATGGTCTTCCATTAATTTGATGGATAAGCTTG
AGCCTTCTCCTTTCCATTGTGGTTGCAACATTTTCATTGTTTTCCCCTAT
ACCCTTTTACACATTACTTTAAAAAGCTTTTATTCCTTGCACACAAATGG
GAATAATAATCCTTTCCTTTCGATTTGATGGTTGAGCACCCCACAACCAG
TTTCCACTACCTGTCATTCAAACCCTAGAAAACTTAATCACTCACACCAC
TTAATTAAACCCTAATAAAAATCCACCTACGTACGTACTCTTGGAAACTC
ATTGCAAAGGAATAACCAAGGGTTAAGAAAATGGATCACCAAGAAATTAC
ACAAAACCAGATTAATAAACGTGAAATAAAGGCATGCAGTTGAATTGGCT
TTGTCACAAACCCTTAAACAAACACTTTCTTTCTGTGCCACTGAGAAAGT
TGTTCATCCACAAACCCATAATGGAATGCTCCGCTATTACTTTTCTTGGT
GCTTGCTATATACCCTCTTTTTCTCCCCACTTCTTCATTCACTGCAGTTA
TTAAGAAACAAAAGGGATAGAGAGAAAATAAAGAAGAGAAAGGTTGAGAG
AGTTTGTGAGAGATGGGGAGGGGTAAGATTGAGATCAAAAGGATTGAGAA
CTCAAGCAACAGGCAAGTTACATATTCCAAGAGGAAGAACGGGATCCTCA
AGAAGGCAAAGGAAATTAGTGTTCTTTGTGATGCTCAAGTTTCCCTTATC
ATCTTTGGTGCCTCTGGAAAGATGCACGAATACATCAGCCCCTCCACCAC
GTTGATTGACATCCTAGACAGATACCAAAGAGCCTCTGGGAAGACCCTCT
GGGATGCCAAACATGAGAACCTCAGCAATGAAATCGATAGACTCAAAAAG
GAGAATGACAGCATGCAAATTGAGCTCAGGCACTTGAAAGGGGAGGACAT
TACGTCACTGAATTACAAGGAACTGATGGCTCTGGAGGATGCCCTTGAAA
ATGGCCTCAATGGCGTCCGTGAGAAAAAGGTGGAAGTGCACAGGATGTTC
AAGAGAAATGGCAAGATTTTGGAGGAGCAAAATAAGGAACTCAATTTCCT
TCTGCAACAACATTTGGCATTAGAAAGCGTTGGAAACATGCATGGACAGT
GGATTTGACAATATGATCAATTCCTATATAATGTAGATTAATGGCTGCTG
TTGTGAAATTAATTCTGGTGAAAGCCTTGTATAACTTATATAATGTCCTA
TTTCCATCTATTTATTATAGACTCTGAAACTTGTTATACCATGATGATTG
AATTTGGATTATATAACACTATTAATTAGTATGTTTTGTGATTCATGATA
TAATGTTAAT
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protein sequence of Vigun09g161200.1_Vu_IT97K-499-35_v1.1

>Vigun09g161200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g161200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g161200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=182bp
MGRGKIEIKRIENSSNRQVTYSKRKNGILKKAKEISVLCDAQVSLIIFGA
SGKMHEYISPSTTLIDILDRYQRASGKTLWDAKHENLSNEIDRLKKENDS
MQIELRHLKGEDITSLNYKELMALEDALENGLNGVREKKVEVHRMFKRNG
KILEEQNKELNFLLQQHLALESVGNMHGQWI*
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mRNA from alignment at Vu09:32858200..32861965-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g161200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g161200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g161200.1; organism=Vigna unguiculata; type=mRNA; length=3766bp; location=Sequence derived from: Vu09:32858200..32861965- (Vigna unguiculata
CTCCAATTCATCATATCTATGGTCTTCCATTAATTTGATGGATAAGCTTG
AGCCTTCTCCTTTCCATTGTGGTTGCAACATTTTCATTGTTTTCCCCTAT
ACCCTTTTACACATTACTTTAAAAAGCTTTTATTCCTTGCACACAAATGG
GAATAATAATCCTTTCCTTTCGATTTGATGGTTGAGCACCCCACAACCAG
TTTCCACTACCTGTCATTCAAACCCTAGAAAACTTAATCACTCACACCAC
TTAATTAAACCCTAATAAAAATCCACCTACGTACGTACTCTTGGAAACTC
ATTGCAAAGGAATAACCAAGGGTTAAGAAAATGGATCACCAAGAAATTAC
ACAAAACCAGATTAATAAACGTGAAATAAAGGCATGCAGTTGAATTGGCT
TTGTCACAAACCCTTAAACAAACACTTTCTTTCTGTGCCACTGAGAAAGT
TGTTCATCCACAAACCCATAATGGAATGCTCCGCTATTACTTTTCTTGGT
GCTTGCTATATACCCTCTTTTTCTCCCCACTTCTTCATTCACTGCAGTTA
TTAAGAAACAAAAGGGATAGAGAGAAAATAAAGAAGAGAAAGGTTGAGAG
AGTTTGTGAGAGATGGGGAGGGGTAAGATTGAGATCAAAAGGATTGAGAA
CTCAAGCAACAGGCAAGTTACATATTCCAAGAGGAAGAACGGGATCCTCA
AGAAGGCAAAGGAAATTAGTGTTCTTTGTGATGCTCAAGTTTCCCTTATC
ATCTTTGGTGCCTCTGGAAAGATGCACGAATACATCAGCCCCTCCACCAC
GTAATTATAAGGACTTCTTTCACTTCTTCATCTTTGCTTTTCTAGATTCC
TGCTTTTCTTTTTGTTTCATCAAGAACAGTGCAGAATAACTCACATATTT
TTCTTTCTGGTTTGTAACTTGGATCTTTTCATTGGTTAAGGTTGATTGAC
ATCCTAGACAGATACCAAAGAGCCTCTGGGAAGACCCTCTGGGATGCCAA
ACATGAGGTATATTATATACATAGCTAGGTTTTTTTTCTTCTTTATGAAG
AACAAACTAAGTAGTTTTTGTTTGATTTCCCTCTGGGATGCCAAACATGC
ATATATGTTGTTGTTTTTCTTAAAATATGTTCAGTTCCAAGAACCAGTGA
TTCTGTGATTAGATCTAGATTTGGAACATGTACGCTGTTTTCCTATGTGT
CTTTATGAACAGATCTGACTATAAAACAATATTATGAACTCGCTTAATTC
CTTTTCTTTGCAAAAGTTTCAAAAGCTGAATGGTATACAAAGATGTGACA
AATATGTCTCTATTCCTAGCTAGGTCGATGGATCTCTCTCTTGACTACAC
GTTTCTTCACTGACATATTCAAACCAGCCACTAGCTAGACCCAGATCTAC
TGCAAATAATGTTCATTTATTTGATAAATTTTCCTTTCAACTCCATTTTT
TTTGTCTTTCTTTCTGAGCTAGGAGTTTACACAATATTGTTGTTGAACTC
ACTGCAGAACCTCAGCAATGAAATCGATAGACTCAAAAAGGAGAATGACA
GCATGCAAATTGAGCTCAGGTAAATGTGTAAATAAACATTAATTATTGCA
CCTTGATTATATGTATATATCCAACGTCATCTCTTAATTAATTATTACTG
ATTAAGTGTATATATTTATATTTCAGGCACTTGAAAGGGGAGGACATTAC
GTCACTGAATTACAAGGAACTGATGGCTCTGGAGGATGCCCTTGAAAATG
GCCTCAATGGCGTCCGTGAGAAAAAGGCAATCATATTTTAATGATTACAT
TTCATTGTTGGTTATGAAACATATGAAACACAGAAAACAAGTTTCCTCAA
ACCTTGTCTTGTTTGTGCCACAGGTGGAAGTGCACAGGATGTTCAAGAGA
AATGTACGTAGGTTTTTTTTCGAATTTGGATTCTATGTGATTTTTTGTGC
TGTTTCTCTATTGTGTCTTTATAATACACTAATTATCACTAATTTTAACA
TTTTAAAATATATTAAAAGAATATTTAAAATATTAATACAGTATACTTTT
AATACTCAGCAAAAAACAGCACAAAAAAACCAGTAAAGAAACATGACTCG
TTTTTTTAACACTGTATACGATGAAGAGTTCATCGTCATAAGTCCAATAT
ATCTACCTTTTTAAATAAGAAATATTGATTTCTGTATGTTATTCTTATCT
TTTGTGATAATTAATTATTTTCACTTGGTGCTGTTGACATATCTGGTATC
ATAATCATAATATATAAAAGTATTACATATACTATTGTTTAATACCTTTG
ATATATTTTGATATTGGTCAGGGCAAGATTTTGGAGGAGCAAAATAAGGA
ACTCAATTTCCTTCTGGTAAGTTGCAACCTGTGTGCGTGCATTAATTCTA
ACACTCATATTTCTAATTTGTATCCATATCATTGGTATCATATATGTTTA
ATAGTGTGTTTGATTTTTAACTAAAATGCATTTCTCTTCAAGTTTTCTAA
ACTTAATTACATTTATATATTATATATGTGTGTGTATTTTGGAGCATATG
ATTAAAAATAATAATTTGCATGATTTGAATTCAAAGTTATTTGTGATTGT
GAAAAGAAATCTCATAGAGGGATGAGAGAGGCTTGATGTGGATGAACTAA
ATAAAGTTGAAGATTTTTATATGAAATACTGTATTTATAGAAAGAAAAAA
AGAGATAAGAGAATGAATGCAAAGAGAGATATAAAGAAATTATTTAAATT
GTACTTATTTTTTTTTAAACTATTTTTGCCAAAAAAAATCTTTTAAATTA
AATCAATTTATTTTTGCTAAAGTAGTGTTTTTCATTTGTGAGATAAAGGT
TGCCGCATTTTTAACTATTTTAAGTTGTAAAATTTAACCTATTATCAAAT
TGATGGTAATACTGAAAAGGATCTTATACATTGTGAAATTTGTGTGAACA
CTGATCAAGCTCCATGAACAACCAGGAAAAAAAATTGATACGTATTAGAT
TTTTGTTTTTAATTTTAATTTGTTAGGTGCATTCATTTTGCGTCATTTGT
AGTTGAAGAACAAATTGAATTTTGTGGTTTTCATATAAAAAAAAAATACA
ATAATACAAACTTGTCTTATAAAATCAGAAGCAATCTTTTTATTTTGGGA
TAATCATATTAATTGAAATTTAAAAGATAGTTTTTTTAAAAAATAAGTAA
GCTTATTACTCATGAATAAAAAACCTATATTACCTTAAAAAATCGCTTTA
TATAAGCCTATTTATGAGGCACTTCTATATGTTACTCATGAATATATACA
TATGACACTTCATCACCAGATCAGAAGCAAAACTTATAAATCATTTATTT
CTATCTTTTATCACATTTTCTATACTTGTCTCACATCTTAATAGATATAT
TAGCTAGCTATTATCATCTCGTGAAGGAAATTTATAGCATAGTCCTTACA
GAAAAGTTCATGAACTATGAAACTAACACTTATTTTAAATGTTGTGTATG
TGTTTTACAGCAACAACATTTGGCATTAGAAAGCGTTGGAAACATGCATG
GACAGTGGATTTGACAATATGATCAATTCCTATATAATGTAGATTAATGG
CTGCTGTTGTGAAATTAATTCTGGTGAAAGCCTTGTATAACTTATATAAT
GTCCTATTTCCATCTATTTATTATAGACTCTGAAACTTGTTATACCATGA
TGATTGAATTTGGATTATATAACACTATTAATTAGTATGTTTTGTGATTC
ATGATATAATGTTAAT
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Coding sequence (CDS) from alignment at Vu09:32858200..32861965-

>Vigun09g161200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g161200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g161200.1; organism=Vigna unguiculata; type=CDS; length=546bp; location=Sequence derived from: Vu09:32858200..32861965- (Vigna unguiculata
ATGGGGAGGGGTAAGATTGAGATCAAAAGGATTGAGAACTCAAGCAACAG
GCAAGTTACATATTCCAAGAGGAAGAACGGGATCCTCAAGAAGGCAAAGG
AAATTAGTGTTCTTTGTGATGCTCAAGTTTCCCTTATCATCTTTGGTGCC
TCTGGAAAGATGCACGAATACATCAGCCCCTCCACCACGTTGATTGACAT
CCTAGACAGATACCAAAGAGCCTCTGGGAAGACCCTCTGGGATGCCAAAC
ATGAGAACCTCAGCAATGAAATCGATAGACTCAAAAAGGAGAATGACAGC
ATGCAAATTGAGCTCAGGCACTTGAAAGGGGAGGACATTACGTCACTGAA
TTACAAGGAACTGATGGCTCTGGAGGATGCCCTTGAAAATGGCCTCAATG
GCGTCCGTGAGAAAAAGGTGGAAGTGCACAGGATGTTCAAGAGAAATGGC
AAGATTTTGGAGGAGCAAAATAAGGAACTCAATTTCCTTCTGCAACAACA
TTTGGCATTAGAAAGCGTTGGAAACATGCATGGACAGTGGATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
IPR036879TF_MADSbox_sf
IPR033896MADS_MEF2-like
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700DNA-binding transcription factor activity
GO:0000977RNA polymerase II transcription regulatory region sequence-specific DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription
GO:0045944positive regulation of transcription by RNA polymerase II