Vigun09g162600.1

Transcript Overview
NameVigun09g162600.1
Unique NameVigun09g162600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1738
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:33026176..33032173 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL369Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL383Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL493Pisum sativum Cameor genome v1aPisum sativum
crvuL456Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL561Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL579Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL802Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL812Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0631Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0635Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL441Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL443Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0936Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0943Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0203Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0322Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0642Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0771Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1209Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL724Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR673Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR692Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR695Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL327Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL335Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL303Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL311Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL466Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL440Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL400Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL466Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL422Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL428Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL584Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR462Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL320Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL409Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL411Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL614Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL334Cicer arietinum
carvuL416Cicer arietinum
carvuL419Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL343Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL438Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR723Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR769Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR771Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR813Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR827Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL296Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL301Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL316Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL061Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL708Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL717Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR513Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
LR48_mrnaVigan04g174400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_009158Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_13984.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Psat05G0259600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.02G104200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_004502461.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Va04G054530.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vum_02G01142.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Hedin2.R1.2g121640.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat5g085800.1Pisum sativum Cameor genome v1aPisum sativum
rna-TanjilR_09191Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Ca_13920.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigan.02G138500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr09.2054.1.6211317bVigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
rna-XM_014644582.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vfaba.Tiffany.R1.2g099560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_03871Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
XM_058925531.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
PvulFLAVERTChr09.1000798Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
jg53870.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g162600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g162600Vigun09g162600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g162600.1Vigun09g162600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g162600.1_Vu_IT97K-499-35_v1.1Vigun09g162600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g162600.1.v1.1.five_prime_UTR.1Vigun09g162600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR
Vigun09g162600.1.v1.1.five_prime_UTR.2Vigun09g162600.1.v1.1.five_prime_UTR.2_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g162600.1.v1.1.CDS.1Vigun09g162600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.2Vigun09g162600.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.3Vigun09g162600.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.4Vigun09g162600.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.5Vigun09g162600.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.6Vigun09g162600.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.7Vigun09g162600.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.8Vigun09g162600.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.9Vigun09g162600.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.10Vigun09g162600.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.11Vigun09g162600.1.v1.1.CDS.11_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g162600.1.v1.1.CDS.12Vigun09g162600.1.v1.1.CDS.12_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g162600.1.v1.1.three_prime_UTR.1Vigun09g162600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC2_ORYSJ (Replication factor C subunit 2 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC2 PE=2 SV=1)

HSP 1 Score: 533.487 bits (1373), Expect = 0.000e+0
Identity = 263/334 (78.74%), Postives = 296/334 (88.62%), Query Frame = 1
Query:    7 SSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTMKAFSNIPEEFAY 1008
            SSQ WVEKYRPRQVKDVA+QEEV+RVLT TL+T   PHMLFYGPPGTGKTTTALAIA QL+GPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG S RK GY CPP+KII+LDEADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSE +MS+RIL+IC EEGL LD  AL+TLS+IS+GDLRRAITYLQSAARLFGSSISS +LISVSG +PE VV+++L +C+SG FD ANKEVNN IA+GYP SQ+++Q  + IV  +D+ DEQKARI KKLGEADKCLVDGADEYLQLL V S T++A  ++P+   +
Sbjct:    7 SSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTALAIAYQLYGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG-SARKGGYPCPPYKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDAQALATLSTISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIPEDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVNADDIPDEQKARICKKLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF 339          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC4_ARATH (Replication factor C subunit 4 OS=Arabidopsis thaliana OX=3702 GN=RFC4 PE=2 SV=1)

HSP 1 Score: 527.324 bits (1357), Expect = 0.000e+0
Identity = 258/335 (77.01%), Postives = 297/335 (88.66%), Query Frame = 1
Query:    1 MQSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVE-ENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTMKAFSNIPEEF 1002
            +QSSQ WVEKYRP+QVKDVA+QEEV+RVLTNTL+T  CPHMLFYGPPGTGKTTTALAIA QLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVG++ R++GY CP FKII+LDEADSMTEDAQNALRRTMETYSKVTRFFFICNY+SRIIEPLASRCAKFRFKPLSE +MS+RIL+IC EEGL LD  ALSTLSSIS GDLRRAITYLQSA RLFGS+I+S +L++VSGVVP +VV  +  AC+SG+FD ANKEV+N +AEGYPASQ++ QLF+ + E ++D++D QKA+I K L E DK LVDGADEYLQLL V S+T+ A S + ++F
Sbjct:    5 LQSSQPWVEKYRPKQVKDVAHQEEVVRVLTNTLQTADCPHMLFYGPPGTGKTTTALAIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGSNHRQSGYPCPSFKIIILDEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSNRILHICNEEGLSLDGEALSTLSSISQGDLRRAITYLQSATRLFGSTITSTDLLNVSGVVPLEVVNKLFTACKSGDFDIANKEVDNIVAEGYPASQIINQLFDIVAEADSDITDMQKAKICKCLAETDKRLVDGADEYLQLLDVASSTICALSEMAQDF 339          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC4_HUMAN (Replication factor C subunit 4 OS=Homo sapiens OX=9606 GN=RFC4 PE=1 SV=2)

HSP 1 Score: 371.318 bits (952), Expect = 5.502e-127
Identity = 182/324 (56.17%), Postives = 240/324 (74.07%), Query Frame = 1
Query:   19 WVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLF-GXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTMKAFSN 987
            WVEKYRP+ V +VA+QEEV+ VL  +LE    P++LFYGPPGTGKT+T LA AR+LFGPEL++ RVLELNASD+RGI VVR K+K+FA + V  S R +G  CPPFKI++LDEADSMT  AQ ALRRTME  SK TRF  ICNYVSRIIEPL SRC+KFRFKPLS+ I   R+L I K+E + +    ++ L  +S GDLR+AIT+LQSA RL  G  I+ + +  ++GV+P + ++ V  AC+SG+FD     V + I EG+ A+Q++ QL + +V EN+LSD+QK+ I++KL E DKCL DGADE+LQL+++ +  M+  S 
Sbjct:   40 WVEKYRPKCVDEVAFQEEVVAVLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGS-RSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKIDGVFAACQSGSFDKLEAVVKDLIDEGHAATQLVNQLHDVVV-ENNLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATVMQQLSQ 361          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC4_MOUSE (Replication factor C subunit 4 OS=Mus musculus OX=10090 GN=Rfc4 PE=1 SV=1)

HSP 1 Score: 369.777 bits (948), Expect = 1.694e-126
Identity = 179/324 (55.25%), Postives = 237/324 (73.15%), Query Frame = 1
Query:   19 WVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLF-GXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTMKAFSN 987
            WVEKYRP+ V +VA+Q+EV+ VL  +LE    P++LFYGPPGTGKT+T LA AR+LFGPEL++ RVLELNASD+RGI VVR K+K+FA + V  S R +G  CPPFKI++LDEADSMT  AQ ALRRTME  SK TRF  ICNYVSRIIEPL SRC+KFRFKPLS+ I   R+L I ++E + +    ++ L  IS GDLR+AIT+LQSA RL  G  +S + +  ++GV+P   ++ +  AC SG+FD     V N I EG+ A+Q++ QL +AI+E  +LSD+ K+ I++KL E DKCL DGADE+LQL+++ +  M+  + 
Sbjct:   40 WVEKYRPKCVDEVAFQDEVVAVLRKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGS-RSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQERLLDIAEKENVKIGNEEIAYLVKISEGDLRKAITFLQSATRLTGGKEVSEDVITDIAGVIPAATIDGIFTACHSGSFDKLEAVVKNLIDEGHAATQLVNQLHDAIIENENLSDKHKSIITEKLAEVDKCLADGADEHLQLMSLCATVMQQLTQ 362          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC4_DICDI (Probable replication factor C subunit 4 OS=Dictyostelium discoideum OX=44689 GN=rfc4 PE=3 SV=1)

HSP 1 Score: 352.829 bits (904), Expect = 4.621e-120
Identity = 167/328 (50.91%), Postives = 234/328 (71.34%), Query Frame = 1
Query:    4 QSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSNTMKAFSN 987
            + ++ WV KYRP+ V DV+YQE+VI  L  +L TG+ PH+LFYGPPGTGKT+T LAIA  ++GPEL K RVLELNASD+RGI VVRTKIK+FA  AV  +          FK+I+LDEADSMT DAQ ALRRT+ET SK TRF  +CNY+SRII+PLASRCAKFRFKPL  V    R+ +I ++EG+  + +    +  +S+GD+R+AITYLQSA R F + IS + + +++G +P ++++ ++  C+  +FD     V + IA+GYP SQ+++QLF+ ++   DL+  QK+ I+ K+G  D+ L+DG++E+LQL  + S  MK  +N
Sbjct:    7 KDTEPWVAKYRPKTVDDVSYQEDVISALKKSLNTGNLPHLLFYGPPGTGKTSTILAIAMDIYGPELMKQRVLELNASDERGIEVVRTKIKNFAGYAVNKTTTGTSNPGATFKLIILDEADSMTTDAQAALRRTIETTSKTTRFCLLCNYISRIIDPLASRCAKFRFKPLDTVATIERLKFISQQEGIKCEESVYQAIQVVSNGDMRKAITYLQSAFRFFANKISEDVIYNIAGSLPPQLIKQLVDCCKKNSFDRLQSMVQSIIAQGYPVSQVISQLFDYVLTTKDLNQSQKSHITMKIGNVDRNLIDGSEEFLQLFDLSSYIMKQLNN 334          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC2_SCHPO (Replication factor C subunit 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rfc2 PE=1 SV=1)

HSP 1 Score: 317.775 bits (813), Expect = 2.552e-106
Identity = 157/322 (48.76%), Postives = 224/322 (69.57%), Query Frame = 1
Query:    4 QSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLF-GXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVSN 966
            + S  WVE YRP+ +  V+ QE  ++VL  TL + + PHMLFYG PGTGKT+T LA++R+LFGP+L KSRVLELNASD+RGI+++R K+K FA   V  + + +GY CPPFKII+LDEADSMT+DAQ ALRRTME+Y+++TRF  ICNY++RII+PL+SRC+K+RFKPL    M  R+ +I  ++ + ++   ++ L   S GD+R+AIT+LQSAA L  G+ I+  ++  ++G VP  ++ ++L    + N         +  AEGY    +L+QL + +++E  LS   K +I  KL E DK L DGADE LQLL ++S+
Sbjct:   16 KKSIPWVELYRPKTLDQVSSQESTVQVLKKTLLSNNLPHMLFYGSPGTGKTSTILALSRELFGPQLMKSRVLELNASDERGISIIREKVKSFAKTTV--TNKVDGYPCPPFKIIILDEADSMTQDAQAALRRTMESYARITRFCLICNYMTRIIDPLSSRCSKYRFKPLDNENMVKRLEFIAADQAVSMEPGVVNALVECSGGDMRKAITFLQSAANLHQGTPITISSVEELAGAVPYNIIRSLLDTAYTKNVSNIETLSRDVAAEGYSTGIILSQLHDVLLKEETLSSPVKYKIFMKLSEVDKRLNDGADETLQLLDLLSS 335          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC2_YEAST (Replication factor C subunit 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RFC2 PE=1 SV=1)

HSP 1 Score: 312.768 bits (800), Expect = 3.728e-104
Identity = 156/325 (48.00%), Postives = 221/325 (68.00%), Query Frame = 1
Query:    7 SSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGTSKRKN--GYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLF-----GXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVV 960
            + Q WVEKYRP+ + +V  Q+  + VL  TL++ + PHMLFYGPPGTGKT+T LA+ ++L+GP+L KSR+LELNASD+RGI++VR K+K+FA + V    + +   Y CPP+KII+LDEADSMT DAQ+ALRRTMETYS VTRF  ICNYV+RII+PLASRC+KFRFK L       R+ +I ++E +  D   L  +  IS GDLRR IT LQSA++       G +I+S  +  ++GVVP  ++  +++  +SG+FD   K VN F+  G+ A+ ++ QL E  +  ++     K +IS  L   D  L +G +E++QLL ++
Sbjct:   23 AQQPWVEKYRPKNLDEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELYGPDLMKSRILELNASDERGISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLASRCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYITNDNFDTNFKNQISWLLFTTDSRLNNGTNEHIQLLNLL 347          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFC2_PHANO (Replication factor C subunit 2 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=RFC2 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.030e-103
Identity = 171/366 (46.72%), Postives = 230/366 (62.84%), Query Frame = 1
Query:   13 QQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFA----AVA----VGTSKRKNG----------YLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXX-----------------------------XGVVPEKVVEAVLQ------ACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLL 951
            Q WVEKYRP+ + +V  Q+  I++L+ TL++ + PHMLFYGPPGTGKT+T LA+A+QL+GPEL KSRVLELNASD+RGI++VR K+KDFA    +VA    V T  +  G          Y CPPFKIIVLDEADSMT+DAQ+ALRRTMETYS++TRF  +CNYV+RII+PLASRC+KFRFK L +     R+  I K E + LD      L  ++ GDLR+AIT+LQSAARL G++ ++     V                             +GV+P   + +         A +S  ++   K V N IAEG+ ASQ ++QL+E ++ +  + D +K R++    E DK LVDG DE+L +L
Sbjct:   33 QPWVEKYRPKTLSEVTAQDNTIQILSRTLQSSNLPHMLFYGPPGTGKTSTILALAKQLYGPELMKSRVLELNASDERGISIVRQKVKDFARQQLSVAPTYNVMTEDKDGGEAKMVRYRDKYSCPPFKIIVLDEADSMTQDAQSALRRTMETYSRMTRFCLVCNYVTRIIDPLASRCSKFRFKSLDQGNAVRRVDDIAKLEDVKLDAGVSEELVRVADGDLRKAITFLQSAARLVGATQTAGRKKKVVVDDEDEMDIDPPSAPSKTTISLEQIAEIAGVIPAPTLASFSDALFPKSAAKSIRYNEIAKVVENMIAEGWSASQTVSQLYEQVMFDERVEDIKKVRLAGVFSETDKRLVDGGDEHLAVL 398          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFCS_ARCFU (Replication factor C small subunit OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) OX=224325 GN=rfcS PE=1 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 2.683e-85
Identity = 148/323 (45.82%), Postives = 202/323 (62.54%), Query Frame = 1
Query:    1 MQSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVA-VGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAE-GYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQLLAVVS 963
            M++ + WVEKYRPR + +V  Q+EVI+ L   +E  + PH+LF GPPGTGKT TA+A+AR LFG E ++   +E+NASD+RGI+VVR KIK+FA  A +G +         PFKII LDEAD++T DAQ ALRRTME YSK  RF   CNYVSRIIEP+ SRCA FRFKP+ +  M  R+L IC++EG+ +    L  L  IS GD R+AI  LQ AA +     +       +   PE++ E ++Q    GNF  A + ++  + E G     ++ QLF  I+    + D  K ++  KLGE D  L +GA+E +QL A ++
Sbjct:    1 MENFEIWVEKYRPRTLDEVVGQDEVIQRLKGYVERKNIPHLLFSGPPGTGKTATAIALARDLFG-ENWRDNFIEMNASDERGIDVVRHKIKEFARTAPIGGA---------PFKIIFLDEADALTADAQAALRRTMEMYSKSCRFILSCNYVSRIIEPIQSRCAVFRFKPVPKEAMKKRLLEICEKEGVKITEDGLEALIYISGGDFRKAINALQGAAAIGEVVDADTIYQITATARPEEMTE-LIQTALKGNFMEARELLDRLMVEYGMSGEDIVAQLFREII-SMPIKDSLKVQLIDKLGEVDFRLTEGANERIQLDAYLA 311          
BLAST of Vigun09g162600.1 vs. DB:Swiss
Match: RFCS1_PYRIL (Replication factor C small subunit 1 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189 / GEO3) OX=384616 GN=rfcS1 PE=3 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 1.393e-77
Identity = 132/311 (42.44%), Postives = 189/311 (60.77%), Query Frame = 1
Query:   19 WVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTGKTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVA-VGTSKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNYVSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSSISHGDLRRAITYLQSAARLFGXXXXXXXXXXXXGVVPEKVVEAVLQACRSGNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLGEADKCLVDGADEYLQL 948
            W EKYRPR   +V   EEV   L   +++G+ PH+LFYGPPGTGKTT AL +AR+L+G E ++   LELNASD+RGINV+R ++K+FA  A VG +         PFK+++LDEAD+MT DAQ ALRR ME Y++ TRF  + NYVSRII+P+ SRCA FRF P+   +M+ R+ YI K EG+ +   A+  +  +S GD+R+AI  LQ AA        +    + + + P  +VE +     SG++  A +++   +     A     + F+  +    L DE KA +++ L + D  L  GADE +QL
Sbjct:    6 WFEKYRPRSFDEVVDLEEVKSRLREFVKSGNMPHLLFYGPPGTGKTTMALVLARELYG-EYWRENTLELNASDERGINVIRERVKEFARTAPVGKA---------PFKLVILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSRIIDPIISRCAVFRFSPMPRHLMAERLKYIAKSEGVEVKEDAIDLIYELSEGDMRKAINILQVAAATNKIVDRNVVAAAAAAIRPTDIVE-LFNLALSGDYLKAREKMRELMYVKGVAGVDFIRAFQRELIRMSLDDETKAEVAELLADVDYRLTQGADEEIQL 305          
The following BLAST results are available for this feature:
BLAST of Vigun09g162600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RFC2_ORYSJ0.000e+078.74Replication factor C subunit 2 OS=Oryza sativa sub... [more]
RFC4_ARATH0.000e+077.01Replication factor C subunit 4 OS=Arabidopsis thal... [more]
RFC4_HUMAN5.502e-12756.17Replication factor C subunit 4 OS=Homo sapiens OX=... [more]
RFC4_MOUSE1.694e-12655.25Replication factor C subunit 4 OS=Mus musculus OX=... [more]
RFC4_DICDI4.621e-12050.91Probable replication factor C subunit 4 OS=Dictyos... [more]
RFC2_SCHPO2.552e-10648.76Replication factor C subunit 2 OS=Schizosaccharomy... [more]
RFC2_YEAST3.728e-10448.00Replication factor C subunit 2 OS=Saccharomyces ce... [more]
RFC2_PHANO1.030e-10346.72Replication factor C subunit 2 OS=Phaeosphaeria no... [more]
RFCS_ARCFU2.683e-8545.82Replication factor C small subunit OS=Archaeoglobu... [more]
RFCS1_PYRIL1.393e-7742.44Replication factor C small subunit 1 OS=Pyrobaculu... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 37..186
e-value: 8.6E-14
score: 61.8
NoneNo IPR availableGENE3D1.20.272.10coord: 236..326
e-value: 1.1E-31
score: 111.0
NoneNo IPR availableGENE3D3.40.50.300coord: 1..170
e-value: 3.7E-54
score: 185.0
NoneNo IPR availableGENE3D1.10.8.60coord: 172..235
e-value: 7.8E-16
score: 59.0
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 170..229
e-value: 1.77674E-13
score: 62.5465
NoneNo IPR availableCDDcd00009AAAcoord: 22..162
e-value: 2.3672E-26
score: 100.298
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 41..168
e-value: 2.1E-17
score: 63.8
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 236..321
e-value: 2.4E-23
score: 82.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..228
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 236..321

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g162600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162600.1; organism=Vigna unguiculata; type=mRNA; length=1738bp
CCTCCTTACCCAAATAATTGGGACCCTAATATCAAAATAAGAACAGAAAA
CCCTCACCCCCTAAACCCTTTTCCTCTATTTACTAATTCCCAATTTATTT
CACCCTTCCGTTTCAGACTCGCGATTGTGATATTTTCTTCGTTCCTTTGA
CTCGTTGCGTGCTCGCTCGGCGGTTCTCGTCGTTCCACTGAAGGGTTCCA
TTTCAGTCATATAATCTGTGCGTGAAAATAGACTGTGCCAATCATGCAGA
GCTCTCAGCAATGGGTCGAGAAATACCGACCGAGGCAAGTGAAAGATGTT
GCGTACCAAGAGGAAGTTATTCGAGTTCTAACAAATACACTTGAAACTGG
AAGTTGCCCCCACATGCTCTTCTATGGTCCTCCCGGCACTGGAAAAACAA
CTACTGCCCTTGCAATTGCCCGTCAGCTTTTCGGGCCTGAGCTCTACAAG
TCTAGGGTGCTGGAGCTGAATGCAAGTGATGATAGAGGGATTAATGTTGT
TCGTACAAAAATAAAAGATTTTGCTGCTGTGGCTGTTGGTACTTCTAAGC
GTAAGAATGGTTATCTTTGTCCTCCATTTAAGATTATTGTTCTAGATGAG
GCTGATTCAATGACAGAAGATGCTCAGAATGCCCTGAGGCGTACAATGGA
AACGTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTATGTGAGCA
GGATTATAGAACCGCTTGCTTCAAGGTGTGCAAAATTCAGGTTCAAGCCA
TTGTCAGAAGTAATCATGAGCAGCCGGATATTGTACATATGCAAAGAAGA
GGGACTCTATCTTGATACTGCGGCTCTTTCAACCCTTAGTTCTATTTCTC
ATGGAGATCTTCGCCGGGCAATCACATACTTGCAGTCTGCAGCTCGCTTA
TTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCTGGGGTTGT
TCCAGAAAAAGTTGTGGAGGCAGTTCTTCAAGCTTGCAGAAGTGGTAATT
TTGATTTCGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGGATATCCA
GCTTCTCAAATGCTTACTCAGTTATTTGAAGCCATTGTTGAAGAAAATGA
TCTATCAGATGAACAGAAAGCAAGAATATCCAAGAAGCTGGGTGAAGCTG
ATAAGTGTCTAGTTGACGGTGCTGATGAATACTTGCAACTTCTTGCTGTG
GTCAGCAATACAATGAAGGCTTTTAGCAACATCCCAGAAGAATTTGCTTA
CGAGTGTTAGATATTAGATAGTCAGCATATCGGAAGGATCAATTATTCTG
CTATAAAGAAAAAGAAACATGTTTAGTTGAGATTTGGTGTCCGTTGTTAA
CTATTATGTGAATTGGACTGTGAAAATCCGGAGTGGATTACTAGACAGTA
GCTTGGACATTCTTGAGTACAAAATTGACGCGGCAGAAGATAAAACGAAT
ACATAGCGTATCAATTTTCTGTTTTTGCACTTAAATATTTAAAGCAGTTA
AAGCACTTCATTTCCGTCTCATCCCAGAACGAATTCAATGCAATTGTTCA
ATTCAAGGTCAGCGGGAACTCATTTCGTTTGACATCTTACTCATTTGTTT
TATTCAGCATAAAATCTGATGTAGAAGCGTAGTACGCATTCGTGGCTATT
CATCTTGTTAATTGCAACGCTGTATTTGTAATATAAGTTAATTGAGAACA
TGACTATGATTGTTTTTTGAAACGTGGATGAACTCGTA
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protein sequence of Vigun09g162600.1_Vu_IT97K-499-35_v1.1

>Vigun09g162600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=339bp
MQSSQQWVEKYRPRQVKDVAYQEEVIRVLTNTLETGSCPHMLFYGPPGTG
KTTTALAIARQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAAVAVGT
SKRKNGYLCPPFKIIVLDEADSMTEDAQNALRRTMETYSKVTRFFFICNY
VSRIIEPLASRCAKFRFKPLSEVIMSSRILYICKEEGLYLDTAALSTLSS
ISHGDLRRAITYLQSAARLFGSSISSENLISVSGVVPEKVVEAVLQACRS
GNFDFANKEVNNFIAEGYPASQMLTQLFEAIVEENDLSDEQKARISKKLG
EADKCLVDGADEYLQLLAVVSNTMKAFSNIPEEFAYEC*
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mRNA from alignment at Vu09:33026176..33032173+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g162600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162600.1; organism=Vigna unguiculata; type=mRNA; length=5998bp; location=Sequence derived from: Vu09:33026176..33032173+ (Vigna unguiculata
CCTCCTTACCCAAATAATTGGGACCCTAATATCAAAATAAGAACAGAAAA CCCTCACCCCCTAAACCCTTTTCCTCTATTTACTAATTCCCAATTTATTT CACCCTTCCGTTTCAGACTCGCGATTGTGATATTTTCTTCGTTCCTTTGA CTCGTTGCGTGCTCGCTCGGCGGTTCTCGTCGTTCCACTGAAGGGTTCCA TTTCAGTCATATAATCTGGTATTTTATTATTCTCTCATTCTCATAATCTT CCTATTCGAATGTTATTATCAGTGTTTATTTTTTGCATTTCATTCACTGT CTCAGTGCTTGCCTTCGTAATTGTTTGTACTTGCTGCATGTATGATTGCC CTCTTAGTACATCAGATACACTCAAAATTTTATAAGATGTTTTAAGACGC AATAGAAGTCACAAATTCGATTATGCACTAAAATATGTATACATATTCTA TTGCGTCCATTTTTGTTACAAAACAAGAAGTTTCCTATTGGAAGGCTTAG CAGCAGGTTTCTCACAACTGGGTCTGGTTTTAAGTTCTTATGCACCAAAT GAAGATAGTAACTGTTAAGAATCTGGCATGAAGACACCTCATTTTCCTAT ATTATGACATGCAGCCTCCTAGTAGCTATTTATATTGCTATTTGTATGTT TTATTGTCTCATATGATACTTTCTTGATATGTTATTGCCTTGATATTTGC TGTTTCTAAACTTTTACTTTTTCTTTTAAATAGTGCGTGAAAATAGACTG TGCCAATCATGCAGAGCTCTCAGCAATGGGTCGAGAAATAGTAACATAAG TTCTCTTTCAATTATTTCTATATCTTATTTTGTACAAATCTAATTTTGCC TGCTGTAACCCAGCCGACCGAGGCAAGTGAAAGATGTTGCGTACCAAGAG GAAGTTATTCGAGTTCTAACAAATACACTTGAAACTGGAAGTGTAATTAC CCTTTCTGAACGCCTATTTCTCCTTTTCCTCCTCTTCTTCCTCACTGAAT CAAGTTAATCTTCTATTGCAGTGCCCCCACATGCTCTTCTATGGTCCTCC CGGCACTGGAAAAACAACTACTGCCCTTGCAATTGCCCGTCAGCTTTTCG GGTATCCCTCTCTGGTTTTATTTTCACAATTATAAGATAGCTTGCTTATT TCTAGCTGTCATGTCAATTTCTTAATTCTGTTGTGTGACTTGTGAAACCT TAATTCTGTCGTGTCACTTTTGCTCTCGTAAATAAAAGTAAACAGAGCTA CTAAATAATAACTAATCAAGAATCCAAGATTAACTATTTACATAATAGAA ACCAAAATGATATGAACTCTCTGTTAAAACTTTCTCTTAATATATACTTT GTCACTCTTAAAAGTATTTCTGTAAACCTTTGCTAGTTCAGTTACACCAT GAAATCATTTACTGAGAAAAAAAGGAAATGAAATATGATTTAAGGAATAC CTTAAGTTCAAATATTTTCACAAAAGTTATATGACCCAATTTCTGAATGT TATATGTGTACACTACTTTTGAATTCTTGACATGTTGAGTCATAGGGATC CACAGACTATGCAAATTGTGCATCACTTTAATAGCAACTTATGGTAATAA ATTTACCAGGAATGTTTTTTGATCAACTGTTAGAAATGAAAGAATAGTGT AATGCTATAGAGGATCATTTGAGGATTGAATTTACCAAAATGTCAATTTT GTTTGTTTTATGAGTTGGGATTCACAGACAGTAAAAATGATGCTGTTTTC TTCCTTAAGCTAACCTGTTGTGCTAATGGGTACAATGGCACATGTAATGT AATTTGTAACAACTATATATGACAGGCCTGAGCTCTACAAGTCTAGGGTG CTGGAGCTGAATGCAAGTGATGATAGAGGGATTAATGTTGTTCGTACAAA AATAAAAGATTTTGCTGCTGTGGCTGTTGGTACTTCTAAGCGTAAGAAGT ATGTGAAATCTAATTCTCTTAAGATTCTTTCCTCCTCCTTTCTCCGCTTG TAAGATCTGTATGACTTCCTCTTTGTTATGGTGTTTATATATTTCAGTGG TTATCTTTGTCCTCCATTTAAGATTATTGTTCTAGATGAGGCTGATTCAA TGACAGAAGATGCTCAGGCATGTTTGCTATGTTTTTCATTTCTGCTATGT TTTTCATTTCTAACGTTGCTTGTCTCAAAGTGTTTGCTTTCACACAACCT TCAATTGCTGTACAGAATGCCCTGAGGCGTACAATGGAAACGTACTCTAA AGTTACAAGGTTCTTTTTTATATGCAACTATGTGAGCAGGTATCTTTCTT TCATGCTAATATGTACTGTTTATTTTGTTAATCTATATCTTTTAGGAGCT AATGAGTATTATAGTTACCATGATAACAGTAATTAATCCAAATAATGCCA TGGAATGGCTGGCTCCAAAAACGGTATGGCTTTTAAAAAAAAATTTGGTT ACCTTTTTTCAATGAGAAAGTATGTTTTCTATATTTGGTTACTTTTTTTT GGCAACACTGTTTTCTGGGAATAGATATTTACCCTGTTTTCCAAAAGCAT TCGTATAGCGAGAAGAAAATCTAACTTTCTTTAGTTAAATGGAAAGTTTT TAATGGAGAAAAGAATATCATATTATTTTATTAAATCGTTTAATGTGGTA ATAAATTAAAGAATTCAGTAAAAGTGACATTACTCTTTGAATTATAGGAA ACTTGTATAAATATTTCTGGTAAAATATTTGATCAACGAAGTAAAACTCA TCATTCATGTGAATCATAATTCTCAAGGTTGATATTTCTCAGGAACCATG GTTCCTGAGTATGAAAATTTTCTTTGGTATCACACGCCATGTTAATGTAA TATATTGATAGTCCTTTTCCTTTTGTTATTCTTGTACTTTCCAAGGATAT GAGACATAGCTTCATATATGGTTGTCATTTTTTTCATAGGATTATAGAAC CGCTTGCTTCAAGGTGTGCAAAATTCAGGTTCAAGCCATTGTCAGAAGTA ATCATGAGCAGCCGGATATTGTACATATGCAAAGAAGAGGGACTCTATCT TGATACTGCGGTGAGAACCTTATGGACTATTTAGTTCAGTGGATGGGAAG GGAAGGAAGAGGAGGGGTTTTGATTAGATACCCCGTATGGTTAAGAGGAA GGGAGGGGAGGGATATCAATGTAGAGGATAAGCAACTCTTTTCTTGTTTG GCTCATGAGGGGAGGGGACAGATTTTTAAAATTAATTTACTTTCATTTCC TTGTTATTTTGTGTTCCAAAGTGTAAATAAGATTATTTTTTTCCATACAT TTTAAATGTTTTAAATTACTTGTGTTCCCCTTCAAATCAGCCGAATGTTG GAGGGGAGCAAAAATTGAATGAGGGATTTTGCTCCCCTCCATTCCCAATC CATCCCCTCTTACAAATTGAATCAAATTAGAAATTTAATTTAAATCAACC CCTTCAACACCCCATTCAATTTCTCTCCATCCCAATGCCATGTCAGTGCT CGCACAATGTAATGTTATTCCTAAAGTTTTCAGTCATTTATCTATAAAGG TTTTGTTAGATCGTAATGGGTTATTTTACATACCATTGCTTCCACAGGCT CTTTCAACCCTTAGTTCTATTTCTCATGGAGATCTTCGCCGGGCAATCAC ATACTTGCAGGTGAGGTGCATTTCCTGATCAACACACTCAATTTTCGAAC ATTTAAGTTATATCTATAAATGATTATTTTGCTATTGCATGTTGCCTGAT TTTTAGGACATGCTTTCATTTTTTTTTTTATTTATATCTGGTGCTGAATC AACTATTAACATCAATGGAAAGTTGATGTGGTGATGAGGGCAAATGTTCA TTGCTGATATGAGAGGGGAGCCTGTATTATGAATTAAATTTGTTTGATTG TAGGAATGTATGCTTTCATCTTTATGCTTTTCTTGTAATGGCATAAGAAT AAAATTCAACGGAAAGATGCAGTGGAGAGTATAAAACACTAGGCTGGTAA GAGATGAGGGCCTCTTGTTAAGACTTTCTGTTGAAACTTGGTAGAACATA GATGTGTTATGATTTGGGTATTATTTGCGACCTGTTCTATCCTTTTAAAA ATATTTTTATGGGGCTCTCCTTCCTACTGGTTTCCATGTAGATTTTTTTT TTCACTTCATGCATAACCAATTTATTAGCATAAACTATAAAATTAAATTA TCTTGTGTGCTATGAGTTAATACATATAATGCTATCACCAGGAAATGTAA ATTGTTTTAATCAAGGCAGTCCTACTGAAAATAGAGGAATTGTGTGTATA CTTTTTTAATTTTTGAGCTAACTTGGTATTTAACATTGCAGTCTGCAGCT CGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCTGG GGTAGGTTGTGGCACCACCTTCCTGCGACTTTTTCTTTCCTATTTTCAAA GGAAACACTGTAATAATAGATTAAAGTTGTTTATAACATTATTTTGTATG TTTTATTGTATGTATGATGATGGGCTCGAGGATTAAATGACAATTATTGA CTGAAGGACCAGGATTTTGAATTGAAGTTTTGGATTTACTTTATCATGTG ATTTTCACTCTTGCTTTTTTAAGAATATAGATAAAGGGTTTTTAACTTGT CCTGGTAGTGTGTTGTCTTGATATATAAGTTCACAAAATTAGCCATGTAT TTGAAATTTTATGAAAGCATTGGAAGTCAATGTTGCATATATTCCTTGAT GTGGCCTCCTATTTGGGGTCTTCTCTTCAAGCTGTGTGCCACTTTTTTGC GTCCTTAACTAGTTTTCATTCCAATTTGTTGTTTTGTGACATCATTTTTG GTGACTATGTACTAGAGCACCTCTTTATCTCCGTTCCTGTTTGTCTGGAC TTTCTAAAATCTCAATCAATATACCAGGTTGTTCCAGAAAAAGTTGTGGA GGCAGTTCTTCAAGCTTGCAGAAGTGGTAATTTTGATTTCGCAAACAAGG AAGTCAACAATTTCATTGCAGAGGGATATCCAGCTTCTCAAATGCTTACT CAGGTATTTATATGTTTGTTTCTGTTTTATTGGGCCAGTTTCGTTAAGAT TTCTACTGTAACTTATTTGAGTTTTGTTTTACTTTTTGTTTTTCCAGTTA TTTGAAGCCATTGTTGAAGAAAATGATCTATCAGATGAACAGAAAGCAAG AATATCCAAGAAGCTGGGTGAAGCTGATAAGGTTATTTATGACTCTTCCG GAATTAATTACACACACTACTTCCCCCCTTCCTATTTACTGTTCCTGGAC ATGATTTTACCACATTTTCTTGGTGTTTTTAACTTTTTAGAACTTCTAAA TTTCAGTGAAGTGCAATTGCCTGTTTTTTCTTCAATTCTCACTTGTTGCT TTTATGGAATTGCAGTGTCTAGTTGACGGTGCTGATGAATACTTGCAACT TCTTGCTGTGGTCAGCAATACAATGAAGGCTTTTAGCAACATCCCAGAAG AATTTGCTTACGAGTGTTAGATATTAGATAGTCAGCATATCGGAAGGATC AATTATTCTGCTATAAAGAAAAAGAAACATGTTTAGTTGAGATTTGGTGT CCGTTGTTAACTATTATGTGAATTGGACTGTGAAAATCCGGAGTGGATTA CTAGACAGTAGCTTGGACATTCTTGAGTACAAAATTGACGCGGCAGAAGA TAAAACGAATACATAGCGTATCAATTTTCTGTTTTTGCACTTAAATATTT AAAGCAGTTAAAGCACTTCATTTCCGTCTCATCCCAGAACGAATTCAATG CAATTGTTCAATTCAAGGTCAGCGGGAACTCATTTCGTTTGACATCTTAC TCATTTGTTTTATTCAGCATAAAATCTGATGTAGAAGCGTAGTACGCATT CGTGGCTATTCATCTTGTTAATTGCAACGCTGTATTTGTAATATAAGTTA ATTGAGAACATGACTATGATTGTTTTTTGAAACGTGGATGAACTCGTA
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Coding sequence (CDS) from alignment at Vu09:33026176..33032173+

>Vigun09g162600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g162600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g162600.1; organism=Vigna unguiculata; type=CDS; length=1017bp; location=Sequence derived from: Vu09:33026176..33032173+ (Vigna unguiculata
ATGCAGAGCTCTCAGCAATGGGTCGAGAAATACCGACCGAGGCAAGTGAA
AGATGTTGCGTACCAAGAGGAAGTTATTCGAGTTCTAACAAATACACTTG
AAACTGGAAGTTGCCCCCACATGCTCTTCTATGGTCCTCCCGGCACTGGA
AAAACAACTACTGCCCTTGCAATTGCCCGTCAGCTTTTCGGGCCTGAGCT
CTACAAGTCTAGGGTGCTGGAGCTGAATGCAAGTGATGATAGAGGGATTA
ATGTTGTTCGTACAAAAATAAAAGATTTTGCTGCTGTGGCTGTTGGTACT
TCTAAGCGTAAGAATGGTTATCTTTGTCCTCCATTTAAGATTATTGTTCT
AGATGAGGCTGATTCAATGACAGAAGATGCTCAGAATGCCCTGAGGCGTA
CAATGGAAACGTACTCTAAAGTTACAAGGTTCTTTTTTATATGCAACTAT
GTGAGCAGGATTATAGAACCGCTTGCTTCAAGGTGTGCAAAATTCAGGTT
CAAGCCATTGTCAGAAGTAATCATGAGCAGCCGGATATTGTACATATGCA
AAGAAGAGGGACTCTATCTTGATACTGCGGCTCTTTCAACCCTTAGTTCT
ATTTCTCATGGAGATCTTCGCCGGGCAATCACATACTTGCAGTCTGCAGC
TCGCTTATTTGGATCTTCAATTTCTTCAGAGAATCTGATTTCTGTGTCTG
GGGTTGTTCCAGAAAAAGTTGTGGAGGCAGTTCTTCAAGCTTGCAGAAGT
GGTAATTTTGATTTCGCAAACAAGGAAGTCAACAATTTCATTGCAGAGGG
ATATCCAGCTTCTCAAATGCTTACTCAGTTATTTGAAGCCATTGTTGAAG
AAAATGATCTATCAGATGAACAGAAAGCAAGAATATCCAAGAAGCTGGGT
GAAGCTGATAAGTGTCTAGTTGACGGTGCTGATGAATACTTGCAACTTCT
TGCTGTGGTCAGCAATACAATGAAGGCTTTTAGCAACATCCCAGAAGAAT
TTGCTTACGAGTGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003959ATPase_AAA_core
IPR013748Rep_factorC_C
IPR027417P-loop_NTPase
IPR008921DNA_pol3_clamp-load_cplx_C
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication