Vigun09g165800.2
|
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP_SOLLC (Filament-like plant protein (Fragment) OS=Solanum lycopersicum OX=4081 GN=FPP PE=1 SV=1) HSP 1 Score: 402.905 bits (1034), Expect = 2.167e-131 Identity = 265/522 (50.77%), Postives = 370/522 (70.88%), Query Frame = 1 Query: 376 KEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLMEVQSKSDFSNASSSTSIDFDKYQKVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNMA--------CRASTTSSLCCVESLKDGQSNTGER-TTVEIDTTKKSGSEPDIDELSCSDSWASALIAELDQFKNEKY--KQISSSSINIDLMDDFLEMERLAALPDTKNES-FIKESAVANDCIHEESSTREEFDASNRQIDXXXXXXXXXXXXXXXXXXXXXXSECVIEISQLKMREAETKLEELQRELENAYKSKQVLENELATMQSEAKSITAKVHLIEAEVDKEKAISVXXXXXXXXXXXXXXXXXXXXXFGSIT-SFSEMKLKQEDLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDTTSIPELSATPSLIARDGAVMLKSNSNGTYSTKRD 1902
KEDLVKQHAKVAEEAI+GWEKAENEV LK+Q++A +N TLE RV+HLD AL+ECVRQLRQ R+EQEK I DA+ +K +E+ES K LEKQL+++Q++ + A TS D D +++YLEKEN L+ EL + SE LE+RTIE +LSTQ AE ASKQ LESI K+ +LE ECR+L MA R+S SS V+S+ D QS++GER TV+ D K S E E SCS+SWASALIAELDQFKNEK K +++ SI ID+MDDFLEME+LAAL +T N++ + AV +D + E+ E+++ ++++ EL++KLEK + EK E++ +S+ +++S L+++E +T+LE LQ+EL+ +SK++LE +L M+ EA++++ + ++ EV+KEK++S E+E + ELE +L +K QE + + S SE+K+KQEDLA+AA KLAECQKTIASLG QL SLATLEDFL DT ++P +++A+ G + K + N T++ KRD
Sbjct: 1 KEDLVKQHAKVAEEAIAGWEKAENEVAVLKQQLDAAVQQNLTLEVRVSHLDGALKECVRQLRQARDEQEKMIQDAMAEK-NEMESEKTALEKQLLKLQTQVEAGKAEMPTSTDPDILVRLKYLEKENAALKIELVSCSEVLEIRTIERDLSTQAAETASKQQLESIKKLTKLEVECRKLQAMARKSSPFNDQRSSAVSSF-YVDSVTDSQSDSGERLNTVDNDALKMSKLETREYEPSCSNSWASALIAELDQFKNEKAMPKTLAACSIEIDMMDDFLEMEQLAALSETANKTPSVTSDAVPHDSPNIENPLAAEYNSISQRVVELEQKLEKIEAEKAELENAFNESQDALKVSSLQLKETQTRLEGLQKELDVVNESKELLEFQLYGMEVEARTMSVNIDSLKTEVEKEKSLSSEMEAKCHELENDLRKKSQEAEAQQTSGSNSELKIKQEDLAVAADKLAECQKTIASLGKQLQSLATLEDFLTDTANLP---GGGAVVAKAGGELWKLHVNETFTPKRD 517
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP1_ARATH (Filament-like plant protein 1 OS=Arabidopsis thaliana OX=3702 GN=FPP1 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.610e-79 Identity = 156/320 (48.75%), Postives = 211/320 (65.94%), Query Frame = 1 Query: 259 STDEDVNGAMISI---SKDRDVPDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLMEVQSKSDFSNASSSTSIDFDKYQKVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNMACRASTTSSLCCVESLKDGQSNTGERTTVEIDTTKKSGSEPDIDELSCSDSWASALIAELDQFKNEKYKQISSSSINIDLMDDFLEMERLAALPDT 1209
S D+++ +S+ ++ ++ D ++ ++EKLSAAL NVSAK+DLVKQH KVAEEA++GWEKAENEV LK+++EA +N LEDRV+HLD AL+ECVRQLRQ R+EQE+ I DAV+++T EL+SS+ +LE Q+ E +KS+ + Q E + KEN +LRHEL A E+LE+RTIE +LSTQ AE ASKQ L+SI KVA+LEAECR+ +A +++ + +S DG GER V SCSDSWAS+ + E ++ Q +SSSI +DLM DFLEMERL ALP+T
Sbjct: 37 SRDDEIQSPTVSLEVETEKEELKDSMKTLAEKLSAALANVSAKDDLVKQHVKVAEEAVAGWEKAENEVVELKEKLEAADDKNRVLEDRVSHLDGALKECVRQLRQARDEQEQRIQDAVIERTQELQSSRTSLENQIFETATKSE------------ELSQMAESVAKENVMLRHELLARCEELEIRTIERDLSTQAAETASKQQLDSIKKVAKLEAECRKFRMLAKSSASFNDHRSTDSHSDG----GERMDV-----------------SCSDSWASSTLIE------KRSLQGTSSSIELDLMGDFLEMERLVALPET 317 HSP 2 Score: 93.5893 bits (231), Expect = 2.124e-18 Identity = 82/225 (36.44%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 1399 SQLKMREAETKLEELQRELENAYKSKQVLENELATMQSEAKSITAKVHLIEAEVDKEKAISVXXXXXXXXXXXXXXXXXXXXXFGSITSFS-EMKLKQEDLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDTTSIPELSATPSLIARDGAVMLKSNSNGTYSTK------RDXXXXXXXXXXXXXXXXTNLP----KHDSEKSINGFVNLFSQTEIGLQLEI 2040
SQ+ ++E ETKL E+Q E++ + K +E++ M+++AK+ +AK+ +E ++ KE+ + + E LE + K SI S + E K+KQED+ AAGKLA CQKTIASLG QL SLATLEDFL DT IP A + + + K + N T+ T+ + + +S + SS ++ ++P + SEK+ NGF +F++++ G+ L I
Sbjct: 561 SQVCLQEIETKLGEIQTEMKLVNELKAEVESQTIAMEADAKTKSAKIESLEEDMRKER----FAFDELRRKCEALEEEISLHKENSIKSENKEPKIKQEDIETAAGKLANCQKTIASLGKQLQSLATLEDFLTDTPIIP--MAANGVSSSSNSESWKVHKNETFMTRNHPESIKPTKETSPSSSSSTASAAVSMPVSTNRGSSEKNRNGFATVFTRSKDGIHLAI 779
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP3_ARATH (Filament-like plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=FPP3 PE=3 SV=2) HSP 1 Score: 232.261 bits (591), Expect = 4.419e-66 Identity = 151/355 (42.54%), Postives = 218/355 (61.41%), Query Frame = 1 Query: 223 VTSHATENVNDGSTDEDVNGAMISISKDRDVPDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLMEVQSKSDFSNASSSTSIDFDKYQKVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNMACRASTTSSLCCVESLKDGQSNTGERTTVEIDTTKKSGSEPDIDELSCSDSWASALIAELDQFKNEKYKQISSSSINIDLMDDFLEMERLAALPDTK--------NESFIKESAVANDCIHE 1263
V+SH +E +D + ++++ + ++ ++E+LSAAL+NVS KEDL KQHAKVAEEA+SGWEKAENE +LK+Q++A T + S LEDR +HLDSAL+ECVRQL Q REEQ + I +A+ K E E++K+ LE ++ E+Q++ D +++S+ D Y K+E LEKEN+ L+ +L + SE++++RTIE +LSTQ AE ASKQ LE I K+ +LEAECR+L M R+ +S L +S D QS+ R + D +S SE I + S ++S++I LMDDFLEME+LAALP ++ N+ K +A N HE
Sbjct: 26 VSSH-SERFSDDQRSQSPELNSKPVTREEEATADIKILTERLSAALLNVSLKEDLAKQHAKVAEEAVSGWEKAENEAAALKQQLDASTSKVSALEDRNSHLDSALKECVRQLWQGREEQNQKIEEAINNKCKEWETTKSQLEARIEELQARQDV----TTSSVHEDLYPKLEALEKENSALKLQLLSKSEEVKIRTIERDLSTQAAESASKQQLEGIKKLTKLEAECRKLRVMVRRSDNSSDL---KSSIDNQSDYSGRVSFS-DNEMQSPSEKIIGKSSM------------------------ATSVDIGLMDDFLEMEKLAALPHSEPGRKHSESNKELEKSNAHVNQLKHE 347 HSP 2 Score: 65.855 bits (159), Expect = 8.296e-10 Identity = 60/157 (38.22%), Postives = 94/157 (59.87%), Query Frame = 1 Query: 1390 IEISQLKMREAETKLEELQREL----------ENAYKSK----QVLENELATMQSEAKSITAKVHLIEAEVDKEKAISVXXXXXXXXXXXXXXXXXXXXXFGSIT-----SFSEMKLKQE-DLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDT 1800
+E SQ +++E E KL ELQ L E+ K+ + +E+ L +++EA+S+ K+ +E +KE+A+S + ++ EL++E+ + KQE + T +LKQE +LA+AA K AECQ+TIASLG +L SLAT EDFLI++
Sbjct: 459 LETSQNRLKETERKLTELQTLLHLTKDAKEAAEDGLKAANGKTEAIESRLKDVEAEAESLILKIKSLEDVTEKERALSAKHNSKCNELQDEISKLKQELEHHQETEPAPNHIKGFELKQEKELAVAASKFAECQRTIASLGQRLQSLATFEDFLIES 615
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP2_ARATH (Filament-like plant protein 2 OS=Arabidopsis thaliana OX=3702 GN=FPP2 PE=2 SV=1) HSP 1 Score: 225.713 bits (574), Expect = 1.392e-63 Identity = 141/284 (49.65%), Postives = 180/284 (63.38%), Query Frame = 1 Query: 367 VSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLMEVQSKSDFSNASSSTSIDFDKYQKVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNMACRASTTSSLCCVESLKDGQSNTGERTTVEIDTTKKSGSEPDIDELSCSDSWA-SALIAELDQFKNEKYK----QISSSSINIDLMDDFLEMERLAALP 1203
+ +K++LVKQHAKVAE+A++GWEKAENEV LK+++E +N LEDRV+HLD AL+ECVRQLRQ R+EQEKNI AV + T EL S+ LEK+++E+Q +++ + + EN +LR E E LE+ IE +LSTQ AE ASKQHL+ I K+A+LEAECR+L +A +S+ SS V+S DG ER E SCSDSWA SA I+ELDQ KNEK Q ++SS IDLMDDFLEMERL ALP
Sbjct: 13 MDSKDELVKQHAKVAEDAVAGWEKAENEVVELKQKLEDAADKNIVLEDRVSHLDGALKECVRQLRQFRDEQEKNIQAAVTESTKELHSANTGLEKRVLELQKEAEAAKS-------------------ENMMLRREFLTQREDLEIVMIERDLSTQAAETASKQHLDIIKKLAKLEAECRKLRILAKTSSSLSSNQSVDSHSDGGR---ERV-----------------EGSCSDSWASSAFISELDQIKNEKGGNRSLQGTTSSTEIDLMDDFLEMERLVALP 257 HSP 2 Score: 81.2629 bits (199), Expect = 1.346e-14 Identity = 64/138 (46.38%), Postives = 86/138 (62.32%), Query Frame = 1 Query: 1399 SQLKMREAETKLEELQRELENAYKSKQVLENELATMQSEAKSITAKVHLIEAEVDKEKAISVXXXXXXXXXXXXXXXXXXXXXFGSITSFSEMKLKQEDLALAAGKLAECQKTIASLGNQLSSLATLEDFLIDTTSIP 1812
S++ +E E KLE ++REL+ A +SK E+ + M EAEV KE+ +S ++ + + EEEL R+ +E+ E K+KQED+A AAGK A+CQKTIASLG QL SLATLE+FLIDT SIP
Sbjct: 420 SRVCFQEVEMKLEAMKRELKLANESKTQAESRVTRM--------------EAEVRKERIVSDGLKEKCETFEEELRREIEEKTMIKREKV-EPKIKQEDIATAAGKFADCQKTIASLGKQLQSLATLEEFLIDTASIP 542
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP4_ARATH (Filament-like plant protein 4 OS=Arabidopsis thaliana OX=3702 GN=FPP4 PE=1 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 4.304e-39 Identity = 100/277 (36.10%), Postives = 163/277 (58.84%), Query Frame = 1 Query: 160 KIAVIPEDINDMSFIKPQSPEVTSHATENVNDGSTDEDVNGAMISISKDRDVPDGLRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLMEVQ-------------SKSDFSNASSSTSIDFDKYQ----------KVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNM 921
K A + E ++ + KP +++ N+N G DE V ++K + D ++++ KLS A ++ AKE LVKQH+KVAEEA++GWEKAE E ++LK +E +TL T+EDR HLD AL+EC+RQ+R +EE E+ +HD + KT+++++ +A E ++ E + S+S ++ I +K Q +E E+E L++E ++++LE+R E N+S ++AE A+KQHLE + K+A+LEAEC+RL +
Sbjct: 15 KTATVTEVVDQENGKKPSYIQISFDQYTNLN-GLKDE-VKSYEEKVTK---LEDQIKDLDLKLSTANADIVAKEVLVKQHSKVAEEAVTGWEKAEAEASALKTHLETITLAKLTVEDRAAHLDGALKECMRQIRSLKEENEQKLHDVIATKTNQMDNLRAEFESRIGEYEEELLRCGAENDALSRSLQERSNMLMRISEEKSQAESEIEHLKNNIESCEREINTLKYETHVITKELEIRNEEKNMSMRSAEAANKQHLEGVKKIAKLEAECQRLRTL 286
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP5_ARATH (Filament-like plant protein 5 OS=Arabidopsis thaliana OX=3702 GN=FPP5 PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 5.809e-37 Identity = 88/222 (39.64%), Postives = 139/222 (62.61%), Query Frame = 1 Query: 325 LRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLME------------------VQSKSD----FSNASSSTSIDFDKYQ-KVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNM 921
++++ EKL+ A ++ KE L+ QHAKVAEEA+SGWEKA+ E +LK+Q+E++TL T EDR +HLD AL+EC RQ+R +EE +K + D +L KT + + KA LE ++ E +Q +S+ S S D +K + ++ EKE + L+++L S+++E+R E N+S ++A++A+KQHLE + K+A+LEAEC RL +
Sbjct: 75 VKDLKEKLTLAHSEINTKESLILQHAKVAEEAVSGWEKADAETLALKRQLESVTLLKLTAEDRASHLDDALKECTRQIRIVKEESDKKLQDVILAKTSQWDKIKAELEGKIDELSEGLHRAASDNAALTRSLQERSEMIVRISEERSKAEADVEKLKTNLQLAEKEISYLKYDLHVASKEVEIRNEEKNMSLKSADIANKQHLEGVKKIAKLEAECHRLRGL 296
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP6_ARATH (Filament-like plant protein 6 OS=Arabidopsis thaliana OX=3702 GN=FPP6 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.627e-34 Identity = 84/222 (37.84%), Postives = 134/222 (60.36%), Query Frame = 1 Query: 325 LRNMSEKLSAALVNVSAKEDLVKQHAKVAEEAISGWEKAENEVTSLKKQVEALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLEKQLME------------------VQSKSDF----SNASSSTSIDFDKYQ-KVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRLTNM 921
+ +++EKLS A + KE LVKQH+KVAE+A+SGWEKA+ E +LK +E++TL T EDR HLD AL+EC+RQ+R +++ E +HD L KT ++E EK++ + +Q +S+ S S + + + +E E+E L++E+ +S++LE+R E N+ ++AE A+KQHLE + K+A+LEAEC+RL ++
Sbjct: 115 VEDLNEKLSVANEEIVTKEALVKQHSKVAEDAVSGWEKADAEALALKNTLESVTLSKLTAEDRAAHLDGALKECMRQIRNLKKDHEVKLHDVALSKTKQIEKMTMEFEKRMCDYEQELLRSAADSDALSRTLQERSNMLVKVSEEKSRADAEIETLKSNLEMCEREIKSLKYEVHVVSKELEIRNEEKNMCIRSAESANKQHLEGVKKIAKLEAECQRLRSL 336
BLAST of Vigun09g165800.2 vs. DB:Swiss
Match: FPP7_ARATH (Filament-like plant protein 7 OS=Arabidopsis thaliana OX=3702 GN=FPP7 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 9.657e-23 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 1 Query: 394 QHAKVAEEAISGWEKAENEVTSLKKQV-EALTLRNSTLEDRVTHLDSALRECVRQLRQTREEQEKNIHDAVLKKTHELESSKATLE-------KQLMEVQSKS---------------DFSNASSSTSIDFDKY-QKVEYLEKENTVLRHELQALSEKLELRTIEWNLSTQTAEMASKQHLESINKVARLEAECRRL 912
+H A+EAI GWEK + EV SLKK++ EAL ++ + E+R +H D+ L+ECV+QLR REEQE+ +HDA+ K + E E ++ K+L E + ++ D + +DF+ +E EKEN LR+E++ L ++LELR E S +TAE + K HLE++ KVA+LE+EC+RL
Sbjct: 51 KHETEAQEAIVGWEKTKAEVASLKKKLDEALNEKHRS-EERSSHTDAGLKECVQQLRFVREEQERRMHDALTKASQEYERRLIVIKTELAGSGKRLAEAEGENAQLSKALLAKNKTVEDLNRERDRIEVDFNSLVSSLESKEKENVSLRYEVRVLEKELELRNEEREFSRRTAEASHKLHLENVKKVAKLESECQRL 246 HSP 2 Score: 58.5362 bits (140), Expect = 1.729e-7 Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 1051 DELSCSDSWASALIAELDQFKNEKYKQIS----SSSINIDLMDDFLEMERLAALPDT 1209
D++SC+DSWASAL++ELD FKN+K S + + LMDDF EME+LA + T
Sbjct: 371 DKVSCADSWASALLSELDNFKNKKEMGTSLVGTPKAAEMKLMDDFAEMEKLAMVAST 427 The following BLAST results are available for this feature:
BLAST of Vigun09g165800.2 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 8 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g165800.2_Vu_IT97K-499-35_v1.1 ID=Vigun09g165800.2_Vu_IT97K-499-35_v1.1; Name=Vigun09g165800.2; organism=Vigna unguiculata; type=mRNA; length=2516bpback to top protein sequence of Vigun09g165800.2_Vu_IT97K-499-35_v1.1 >Vigun09g165800.2_Vu_IT97K-499-35_v1.1 ID=Vigun09g165800.2_Vu_IT97K-499-35_v1.1; Name=Vigun09g165800.2_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=681bpback to top mRNA from alignment at Vu09:33360797..33365130- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g165800.2_Vu_IT97K-499-35_v1.1 ID=Vigun09g165800.2_Vu_IT97K-499-35_v1.1; Name=Vigun09g165800.2; organism=Vigna unguiculata; type=mRNA; length=4334bp; location=Sequence derived from: Vu09:33360797..33365130- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:33360797..33365130- >Vigun09g165800.2_Vu_IT97K-499-35_v1.1 ID=Vigun09g165800.2_Vu_IT97K-499-35_v1.1; Name=Vigun09g165800.2; organism=Vigna unguiculata; type=CDS; length=2043bp; location=Sequence derived from: Vu09:33360797..33365130- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
|