Vigun09g171400.1

Transcript Overview


Name	Vigun09g171400.1
Unique Name	Vigun09g171400.1_Vu_IT97K-499-35_v1.1
Type	mRNA
Organism	Vigna unguiculata (cowpea)
Sequence length	1778

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vu09	supercontig	Vu09:34122890..34127649 +	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vuvuL368	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
psvuL177	Pisum sativum Cameor genome v1a	Pisum sativum
psvuL497	Pisum sativum Cameor genome v1a	Pisum sativum
psvuL505	Pisum sativum Cameor genome v1a	Pisum sativum
crvuL573	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum
pvvuL713	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
pvvuL787	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
caivuL0650	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
caivuL0660	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
cavuL455	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
ccvuL0470	Cajanus cajan Asha genome v1.0	Cajanus cajan
ccvuL0954	Cajanus cajan Asha genome v1.0	Cajanus cajan
anvuL0202	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0322	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0369	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0641	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0773	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL1209	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvuL537	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
vuzwsR640	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
vuzwsR675	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifvuL101	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuL093	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
tifvuL314	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuL291	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvuL405	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvuL409	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vssvuL831	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
vuvuaR455	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
vuvuaR463	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
canvuL404	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvuL478	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvuL150		Cicer arietinum
carvuL411		Cicer arietinum
ccavuL336	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavuL438	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vuvumR750	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vuvvaR807	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vuvvaR851	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvuL247	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvuL295	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvuL265	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvuL322	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvuL624	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
pvfvuL693	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vuvunR512	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata
vuvunR527	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
evm.model.Chr09.1971	Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0	Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_06578.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
rna-XM_014643106.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
LR48_mrnaVigan04g184200	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Ca_13272.1	Cicer arietinum ICC 4958 genome v2	Cicer arietinum
Ca_11174	Cicer arietinum CDC Frontier genome v1.0	Cicer arietinum
Psat5g135800.1	Pisum sativum Cameor genome v1a	Pisum sativum
Psat05G0394400-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
PvulFLAVERTChr09.280	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vigan.02G126600.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Vigst.02G096700.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
XM_058927698.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
Phvul.009G026300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Vfaba.Tiffany.R1.2g067960.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-TanjilR_12670	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
rna-KK1_009220	Cajanus cajan Asha genome v1.0	Cajanus cajan
jg52673.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
Vum_02G01035.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata
Va04G056600.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Vfaba.Hedin2.R1.2g083040.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Cr_12646.1	Cicer reticulatum L. PI489777 genome v1	Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigun09g171400.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigun09g171400	Vigun09g171400_Vu_IT97K-499-35_v1.1	Vigna unguiculata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g171400.1_Vu_IT97K-499-35_v1.1	Vigun09g171400.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	polypeptide
Vigun09g171400.1	Vigun09g171400.1_Vu_IT97K-499-35_v1.1-protein	Vigna unguiculata	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g171400.1.v1.1.five_prime_UTR.1	Vigun09g171400.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g171400.1.v1.1.CDS.1	Vigun09g171400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g171400.1.v1.1.CDS.2	Vigun09g171400.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g171400.1.v1.1.CDS.3	Vigun09g171400.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g171400.1.v1.1.three_prime_UTR.1	Vigun09g171400.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	three_prime_UTR

Homology

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_THEEB (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.558e-32
Identity = 69/160 (43.12%), Postives = 102/160 (63.75%), Query Frame = 1

Query:  376 LIQNVSSLSADKAT-------SKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGP 834
            L++ +++L A KA+          +Y+RL ADF+NFRKR+ +E+  ++   +  +I  LL +VDSFE  +   +  TE E+KI  SYQG+YKQ VE L+   VS +   GKPF+P  HEA+ RE + E  +G +I+E +RG++L DRVLR A VKV+  P
Sbjct:   76 LLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREATNEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP 235

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNSC (Protein GrpE OS=Synechococcus sp. (strain CC9605) OX=110662 GN=grpE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.376e-31
Identity = 68/164 (41.46%), Postives = 106/164 (64.63%), Query Frame = 1

Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
             +R  +L Q +S+L  +  T   +Y+R+ ADFDNFRKR  ++    Q D +++L+     ++L +VD+FE+ +QQ     E+ + +  SYQG+YKQ VEVL+   V+ +  VG+ F+P  HEA+ REES+EF + ++ +E +RG+    RVLR A VKVS+GPG
Sbjct:   44 ADRMQQLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRD----QDDMRKQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVGQEFDPNLHEAVLREESSEFAEDVVSEELQRGYHRDGRVLRHAMVKVSMGPG 203

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNPX (Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.022e-31
Identity = 68/171 (39.77%), Postives = 108/171 (63.16%), Query Frame = 1

Query:  337 EKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            E  +     R  +L   + +L  +  T + +Y+R+ ADFDNFRKR  ++    Q D +Q+L+     ++L +VD+FE+ +QQ    +E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA+ REESTE  + ++I+E +RG+ L  +VLR A VKVS+GPG
Sbjct:   36 EGSLTDPAERLQQLEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRD----QEDIRQQLVCSTLSEILPVVDNFERARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREESTEQPEDVVIEELQRGYHLNGKVLRHALVKVSMGPG 202

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMP (Protein GrpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4) OX=59919 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.650e-30
Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1

Query:  313 DENGVALIEKGIYSAVNRKNKLIQN---VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKS 849
            D+  + + ++ IY A + KN +  N   +  L  +  T K +YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  V + F+P  HEA+ RE S EF + III+E +RG+ L  +VLR A VKVS+GPG   S
Sbjct:   36 DKQTLEVDDENIY-AEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPSQEFNEDIIIEELQRGYHLEGKVLRHALVKVSMGPGQQNS 216

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNS9 (Protein GrpE OS=Synechococcus sp. (strain CC9902) OX=316279 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.239e-30
Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = 1

Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERP 882
             NR  +L Q ++SL  +    + +Y+R+ ADFDNFRKR  ++    Q D +Q+L+     ++L +VD+FE+ +QQ     E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA+ REE+ E  + I+ +E +RG+    RVLR A VKVS+GPG      S D + E+P
Sbjct:   48 ANRLQQLEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARD----QDDLRQQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREENQEHAEDIVCEELQRGYHRDGRVLRHAMVKVSMGPGPES---SSDAASEQP 219

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROM3 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.138e-30
Identity = 73/184 (39.67%), Postives = 110/184 (59.78%), Query Frame = 1

Query:  298 AFFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            A  N DE   +     +     R  +L Q  SSL  +  T + +Y+R+ ADFDNFRKR  ++    Q D + +LI     ++L +VD+FE+ +QQ +   E+ + +  SYQG+YKQ VEVL+   V+ +  VG+ F+P  HEA++RE S E  + ++ +E +RG+ L  RVLR A VKVS+GPG
Sbjct:   27 ASMNSDEGQPSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRD----QDDLRLQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFDPTLHEAVSREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPG 206

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROM9 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9312) OX=74546 GN=grpE PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.452e-29
Identity = 69/172 (40.12%), Postives = 107/172 (62.21%), Query Frame = 1

Query:  388 VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERPSTAAGID 903
            +  L  +  T K++YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  VG+ F+P  HEA+ RE S EFK+ +I++E +RG+ L  +VLR A VKVS+G G   S       +E+ +    ID
Sbjct:   63 LEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFKEDLIVEELQRGYHLEGKVLRHALVKVSMGHGQQNSQ----EEVEKDTVEEDID 230

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMM (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=grpE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.917e-29
Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 1

Query:  298 AFFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            A  N DE   +     +     R  +L Q  SSL  +  T + +Y+R+ ADFDNFRKR  +++  ++       + ++L +VD+FE+ +QQ +   E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA++RE S E  + ++ +E +RG+ L  RVLR A VKVS+GPG
Sbjct:   27 ASINSDEGQSSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFDPTLHEAVSREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPG 206

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMS (Protein GrpE OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=grpE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.973e-29
Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 1

Query:  388 VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKS 849
            +  L  +  T K++YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  VG+ F+P  HEA+ RE S +F++  II+E +RG+ L  +VLR A VKVS+GPG   S
Sbjct:   63 LEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEKFEEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNS 216

[Close]

BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_GLOVI (Protein GrpE OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=grpE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.168e-28
Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 1

Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSL 828
            + R ++L    S L    A  + +Y RL ADFDNFRKR+ +E+  +      +L++ +L + D+F++ +   +   E+E+K+  SYQ +Y+QF+ VL    V+ +  +G+PF+P QHEAI REES    +  ++ E ++G+LL D+VLRPA VKV++
Sbjct:   35 IARIDQLAAENSDLQKKLADYEQKYTRLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQPFDPAQHEAILREESAGVSQETVVAELQKGYLLADKVLRPAMVKVAI 191

The following BLAST results are available for this feature:

BLAST of Vigun09g171400.1 vs. DB:Swiss

BLAST of Vigun09g171400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
GRPE_THEEB	4.558e-32	43.13	Protein GrpE OS=Thermosynechococcus elongatus (str...	[more]
GRPE_SYNSC	3.376e-31	41.46	Protein GrpE OS=Synechococcus sp. (strain CC9605) ...	[more]
GRPE_SYNPX	9.022e-31	39.77	Protein GrpE OS=Synechococcus sp. (strain WH8102) ...	[more]
GRPE_PROMP	2.650e-30	40.66	Protein GrpE OS=Prochlorococcus marinus subsp. pas...	[more]
GRPE_SYNS9	3.239e-30	39.66	Protein GrpE OS=Synechococcus sp. (strain CC9902) ...	[more]
GRPE_PROM3	4.138e-30	39.67	Protein GrpE OS=Prochlorococcus marinus (strain MI...	[more]
GRPE_PROM9	1.452e-29	40.12	Protein GrpE OS=Prochlorococcus marinus (strain MI...	[more]
GRPE_PROMM	1.917e-29	37.78	Protein GrpE OS=Prochlorococcus marinus (strain MI...	[more]
GRPE_PROMS	3.973e-29	42.86	Protein GrpE OS=Prochlorococcus marinus (strain AS...	[more]
GRPE_GLOVI	1.168e-28	38.22	Protein GrpE OS=Gloeobacter violaceus (strain PCC ...	[more]

InterPro

Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 173..188 score: 26.37 coord: 255..274 score: 46.56 coord: 145..161 score: 45.22 coord: 228..243 score: 41.41
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 121..275 e-value: 2.0E-38 score: 131.7
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 231..274
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 65..276 score: 15.522
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 141..274 e-value: 6.86987E-42 score: 139.563
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 106..218 e-value: 1.5E-19 score: 71.7
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 126..219
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10		coord: 221..275 e-value: 2.4E-17 score: 64.4
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 222..276
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..65
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..303

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Vu09:34122890..34127649+
coding sequence from alignment at Vu09:34122890..34127649+

mRNA sequence

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=mRNA; length=1778bp
taaaaataaaacaaaGAAACTTGGTCTGGAGTTTGGAGAAACCACACAAA
TACGCATCCAAGAACATTCCAGAACCCACTGTCACACACTATCTCTGTTT
TGTTACGCTCTGACTGCTGAAGGAGCACAAGAGAAGAGAATCCATCAATG
GCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTCTAC
TCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATATCTT
TTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGAAGA
AACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGGAAATGATGAGAC
AGGTGAGACCCGGAAAGATTTCAGAGGGATAGACGGTGATGGAGATAAAA
AACCATTACCCAGTTTAATGGTCCTCGTTGAAGCATACAAAGAAGCCTTT
TTTAATGGTGATGAAAATGGTGTTGCTCTGATTGAAAAGGGAATATATTC
AGCTGTAAATAGAAAAAATAAATTGATTCAGAATGTATCAAGTTTATCAG
CAGACAAAGCTACTTCCAAGGATAGATATGTTCGATTACAAGCTGATTTT
GACAATTTTAGGAAAAGGTCCGACAAAGAAAGACTTAGCATCCAATCTGA
TGCCCAACAAGAACTCATTGAACAGCTTTTGTTGATGGTGGACAGTTTTG
AAAAAACAAAACAGCAAACTAAAGCAGCAACAGAGAAAGAGAAGAAAATT
GATGTTAGCTATCAAGGAATTTACAAACAATTTGTAGAGGTTCTGAGGAG
TCATCATGTTTCAGTGATAGCAACAGTGGGCAAGCCGTTTAATCCCTTGC
AACATGAAGCCATTGCACGTGAGGAGTCAACAGAGTTCAAGAAAGGGATT
ATAATTAAAGAAACACGACGTGGTTTCTTGCTCAGAGATCGAGTTCTAAG
GCCAGCCCAGGTGAAGGTTTCATTAGGTCCTGGAGCTACGAAATCTCCTG
TGTCTCCTGACAACTCCATGGAGCGACCTTCAACAGCTGCTGGAATAGAT
GAAAGATAGTCTCTTCAACTTTCTTACTTATTAAAAGTCTAGCTCCTCCT
GCAAACATGATGTCTTTACATTGGTCAACTTGAAATGCTTCTAGTATTCA
ATATTTTGGTACTTGGGCCGTAGGTGAGTGTAGTCCCTTGGACCTAGCAA
ATTTCACACCACACTTGAATTTTTGAGAAAGGGAATTAATTTTGTTCATG
AGAGAACAATGAGTTTCTTGTGTAATCCATTTTTAACCAAAAGCAAAAAA
ACGGTTCATTCTTGAGCTCTTCTGCCATTTTTTTTCCTTGTCTCAATACT
AAGAAAGCTAGACTGCAGGAACGCCTTGTAGCCAACCAAAAATCAACTGC
ATTTTGAGTTCTAAAGTGAAGCTCACATGGAGTAGAACTTGTAAGTGATA
GTAGTTGATTTTATTGAAGAGATTCACACTATGACTGGCTGTATGAAAAG
ATGATATTGGGAATCATGGTTTCACAGTATCATATTATGGTTCCTGGTCT
TTTGGTATTATGTGTTATGTTTATAACACGTCACAATTTTGATTAAGTTC
TTATCGTTCCTACCTTCTTGTTTGCACCTCTAATGTGTATTTTACATTAT
CATGGACATTGGTAAGTTCTTATACACTTGTATTTTTAATACTAGATAGT
CTTCATTAAATTATAGTGTCTTAAATACCAAGCTTATACGAAACTTACTG
TAAGTTGTCTTTTATGGGTATTGAGATT

protein sequence of Vigun09g171400.1_Vu_IT97K-499-35_v1.1

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=304bp
MATFLSNQSLLAPCPCSTPFSSNPFQTLKPKIISFSSRGFPSPLNSSPNR
RNPLKYSQGPPPTGNDETGETRKDFRGIDGDGDKKPLPSLMVLVEAYKEA
FFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQAD
FDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFEKTKQQTKAATEKEKK
IDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKG
IIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERPSTAAGI
DER*

mRNA from alignment at Vu09:34122890..34127649+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=mRNA; length=4760bp; location=Sequence derived from: Vu09:34122890..34127649+ (Vigna unguiculata
TAAAAATAAAACAAAGAAACTTGGTCTGGAGTTTGGAGAAACCACACAAA
TACGCATCCAAGAACATTCCAGAACCCACTGTCACACACTATCTCTGTTT
TGTTACGCTCTGACTGCTGAAGGAGCACAAGAGAAGAGAATCCATCAATG
GCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTCTAC
TCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATATCTT
TTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGAAGA
AACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGTACGCTCTCACTC
CTTCAAATCTTACACTCTTCTCATTTTTTTATAATTAATTATTCTTATTT
ACTGCTTATTGGATTCCTATCACGCCCCATTATATTGCTTCAAAATTATT
AATCACCAGAGAGTCAATTGAATCAAAACATGAGAGTCAGCATTTTCCTT
TTTGTAATTTCTAATAAATTTCATATAGTAAGAGGGGGTGAGTTAAAAAT
GGATTATTGTGTTGCTTGCATTTCTTATAGTCTTAATAGACATTGAATCC
TCAATGTTTATTAATTGCCTTCTTGTACCTCTGATGCTTGGTCTCTTCCA
CTATCGATTGCAGGAGGGTATCCTTATACAAAAATAAAATAAAATAGAAC
AATAGTGTTACTTAAAATTTCCCATTTTATTTTATTTTTATAAATATTGT
TGTTACCCTTCAGAACTGCATGTGGTCAAAGTACTAGCTTTCGTAATGTT
TGTTAAGTTTAAGGTGCAGTTGGATATTTTTGTTTCATTTGTTGAAGATG
CTATGTTTTATATTTATGTACCTAACCTAGCCAAATCTTCTCTCTTTTGT
CCTTCCTAGGGAAATGATGAGACAGGTGAGACCCGGAAAGATTTCAGAGG
GATAGACGGTGATGGAGATAAAAAACCATTACCCAGTTTAATGGTCCTCG
TTGAAGCATACAAAGAAGCCTTTTTTAATGGTGATGAAAATGGTGTTGCT
CTGATTGAAAAGGGAATATATTCAGCTGTAAATAGAAAAAATAAATTGAT
TCAGAATGTATCAAGTTTATCAGCAGACAAAGCTACTTCCAAGGATAGAT
ATGTTCGATTACAAGCTGATTTTGACAATTTTAGGAAAAGGTCCGACAAA
GAAAGACTTAGCATCCAATCTGATGCCCAACAAGAACTCATTGAACAGCT
TTTGTTGATGGTGGACAGTTTTGAAAAAACAAAACAGCAAACTAAAGCAG
CAACAGAGAAAGAGAAGAAAATTGATGTTAGCTATCAAGGAATTTACAAA
CAATTTGTAGAGGTTCTGAGGAGTCATCATGTTTCAGTGATAGCAACAGT
GGGCAAGCCGTTTAATCCCTTGGTAAGTTAAATTTACAAAAACCTTTGGT
CTTGTGTGCGGAATTTCTTTCCTTTTGTTCTGAGTTGCTACTTGATGACT
GTGAAATCCAACAAATTCTATTGCTACTCTACACAAAACAAATAATTTGA
GTATAATGGTGCCATAGGAAATGAAATTAGGTAAAATAATAATTAAACCA
ATGAGCAAAATAATGTAAATGATGAAATTCAATAATGTAATCTTAACACT
GATCATAAACAGTTTCAAATGGCAATCTATGGTAACACACCTCAGCTGCG
GGGACAGCCATGATGTGTGTTTATTCCCAAAAGGCCTCTGAAGACGTTTG
AGCTTGTTTGGAACGGGGGTTAAAATTTTTGGGATTTGAATTTCCCAAAA
GTGAAAGCTTAAACTGTAGTGTAGTGAAAATGATAAAGATGACTTGGATT
TTGAAGGTTATGACCCTTGTATTTATCTCCATCACCGTCTATCCCTCTGA
CTTTTCATGATTTATTATGAGTGCCATGAATTTTTAATAATTTTTAAGAA
GTTATATGTCCATAGTATGCAGTATAAGCTATATAAATAAATTTAGGAAT
AATGACTATCCGACTATAGCATTTTTTCAGATTTAAGATGGACCTTTTTA
CCTTTAAATATTTTGTTCTAGTTGTGAACAAGCTTTAACAATCCATGCTT
TGCTACTTTTTTGATGAGCAAACTCATTGGTCATTTCCTTTATTAAAAAA
CAACCCTAGAAAAAAAATTAGGATTTAGTATACCAGTAGCCTTAAAATTA
GAGACAGATTTCTAGCCAACAATGTTGGTATTGCAAACAATTTCGATGCA
TCAATTTCTTTTGCTGTGTTCGATGCTAGACGATCATTTTCTCAAGCTTT
TACTTATGTCAATGAGTGAGAACAGTAGTAGATTTAGTTCAAGAGTTTGA
TCTTCCCCCAAAAAAAAGGGATATAGAGGGGTAAGGGTCCTTTCTTTTGT
TGTTGCACTGAACTAAGTAAGTGTCCTCTTCTCAGAGAGGAGGAGTTGCC
TAAACCTAAAGGATTAGTTCCTCGAGTCTAGTTAGCTCGACAGCTTAACA
CGAATAACGCGCGAGCTTTCCTCGACTATAGCGCGAGTAGAGTCACCACC
TACCACTAAAAGGAAAAGGAAGTGCAGTGATTTCAGGATACACGGATATA
ATTTCTTATACTTGCCCTTTTTTTCTTTAAAAAGGCGTTCATTGATCTGT
AATTTTCTAGGAGTCTGGATCAAATAAATATGTAGAGTACCTTGTACAAT
GAGTGATTAAATTTGGGAGCAGCTTTGCTCTTTAGGTCACTTTATTATAA
TTTGCTTTTAGGGAGATATTGCATCAGTATTGCAATATTTGAATCACTAT
TTACTTCCTTTTGGTTTTGGATTTATGGTGATAAGGTGCACAACTGCTCA
TGATGCACTTGGTCTCACAACTAACATTTTTAATTGATAAAAAAAATCCA
TTAAATGGGATGTTATATCTAATGCCTTGACGAGGTCAGGTTGAAATTAA
ATTTTTGGCCCTTGTCTGTTTTCTGTTCAACAACAATTTTCTCTTTTCTA
CTCTCCGAACATTTGAAAGTGTTTGTTCCCAAAGCAAAATTCTGTTTCTA
AAAGAGTGGTGTCTTGATTCCTGAACAGAGCACCTTAAGAAAATAGAAAG
AAAAATAGGATGAGATAAGATCTTTGTTTTGGAAATACTTATCAGAACTT
TTTGAACAAGAAATTAATTACTGAGGAGGGTGAAATTGTTTTATAAAACG
TGAAACAAAAAGGGGAGAGGGGAATTAACGGACTCTAGGTTTTTTCTTTT
AATTTTCTTATAGCAAGTGTGATTCTTCTATTGGTTGTCCCATGACAATC
CCCAAGATTACACATTGCCTTTGAACCGAACTCTTGTGGTAAAGGAACAC
AGGTTGAACTTTAAACATATAATCCACTATGGGTAACTACGGTAAACACC
TTTGAGATTTGTGTTTATGAATTATTACACTTGCATTCTTTTTTATTGAA
AAATTGCACTGACCTTCTCTACTCATTTCTGTTATTTTGAGCTATCATGG
GTATGGTTCATGCGTAGAAATTGGTAGATATGTGTACTATTTTTTTAATA
ACAGGTGTCACGTGTAAAAATAATGCATGAGGTAGGGACGAGGGTGGAAT
TTTCCGATCAGGAAAGGTTAAGTGTGAAATATTGTTGTATTCATAGGTTT
GGCTGGTTTGATTTTCCTCATTTTACCCATCTTAAGAGAGTTTTCATTGC
AATATAAGCTTGAAACTAAAATGTGTGGTTTGTTCCTGCTTGTTGAAGAC
ATTTTAATGAAACCTTAGAGAAAGTTACCACGTAGTGACTTGGCTATTGT
TTAATCTGTTTGTGGTTTACTTTTGTCACAGCAACATGAAGCCATTGCAC
GTGAGGAGTCAACAGAGTTCAAGAAAGGGATTATAATTAAAGAAACACGA
CGTGGTTTCTTGCTCAGAGATCGAGTTCTAAGGCCAGCCCAGGTGAAGGT
TTCATTAGGTCCTGGAGCTACGAAATCTCCTGTGTCTCCTGACAACTCCA
TGGAGCGACCTTCAACAGCTGCTGGAATAGATGAAAGATAGTCTCTTCAA
CTTTCTTACTTATTAAAAGTCTAGCTCCTCCTGCAAACATGATGTCTTTA
CATTGGTCAACTTGAAATGCTTCTAGTATTCAATATTTTGGTACTTGGGC
CGTAGGTGAGTGTAGTCCCTTGGACCTAGCAAATTTCACACCACACTTGA
ATTTTTGAGAAAGGGAATTAATTTTGTTCATGAGAGAACAATGAGTTTCT
TGTGTAATCCATTTTTAACCAAAAGCAAAAAAACGGTTCATTCTTGAGCT
CTTCTGCCATTTTTTTTCCTTGTCTCAATACTAAGAAAGCTAGACTGCAG
GAACGCCTTGTAGCCAACCAAAAATCAACTGCATTTTGAGTTCTAAAGTG
AAGCTCACATGGAGTAGAACTTGTAAGTGATAGTAGTTGATTTTATTGAA
GAGATTCACACTATGACTGGCTGTATGAAAAGATGATATTGGGAATCATG
GTTTCACAGTATCATATTATGGTTCCTGGTCTTTTGGTATTATGTGTTAT
GTTTATAACACGTCACAATTTTGATTAAGTTCTTATCGTTCCTACCTTCT
TGTTTGCACCTCTAATGTGTATTTTACATTATCATGGACATTGGTAAGTT
CTTATACACTTGTATTTTTAATACTAGATAGTCTTCATTAAATTATAGTG
TCTTAAATACCAAGCTTATACGAAACTTACTGTAAGTTGTCTTTTATGGG
TATTGAGATT

Coding sequence (CDS) from alignment at Vu09:34122890..34127649+

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=CDS; length=912bp; location=Sequence derived from: Vu09:34122890..34127649+ (Vigna unguiculata
ATGGCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTC
TACTCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATAT
CTTTTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGA
AGAAACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGGAAATGATGA
GACAGGTGAGACCCGGAAAGATTTCAGAGGGATAGACGGTGATGGAGATA
AAAAACCATTACCCAGTTTAATGGTCCTCGTTGAAGCATACAAAGAAGCC
TTTTTTAATGGTGATGAAAATGGTGTTGCTCTGATTGAAAAGGGAATATA
TTCAGCTGTAAATAGAAAAAATAAATTGATTCAGAATGTATCAAGTTTAT
CAGCAGACAAAGCTACTTCCAAGGATAGATATGTTCGATTACAAGCTGAT
TTTGACAATTTTAGGAAAAGGTCCGACAAAGAAAGACTTAGCATCCAATC
TGATGCCCAACAAGAACTCATTGAACAGCTTTTGTTGATGGTGGACAGTT
TTGAAAAAACAAAACAGCAAACTAAAGCAGCAACAGAGAAAGAGAAGAAA
ATTGATGTTAGCTATCAAGGAATTTACAAACAATTTGTAGAGGTTCTGAG
GAGTCATCATGTTTCAGTGATAGCAACAGTGGGCAAGCCGTTTAATCCCT
TGCAACATGAAGCCATTGCACGTGAGGAGTCAACAGAGTTCAAGAAAGGG
ATTATAATTAAAGAAACACGACGTGGTTTCTTGCTCAGAGATCGAGTTCT
AAGGCCAGCCCAGGTGAAGGTTTCATTAGGTCCTGGAGCTACGAAATCTC
CTGTGTCTCCTGACAACTCCATGGAGCGACCTTCAACAGCTGCTGGAATA
GATGAAAGATAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR000740	GrpE
IPR013805	GrpE_coiled_coil
IPR009012	GrpE_head

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

Vocabulary: **Molecular Function**
Term	Definition
GO:0051087	protein-folding chaperone binding
GO:0042803	protein homodimerization activity
GO:0000774	adenyl-nucleotide exchange factor activity

Search form

Vigun09g171400.1