Vigun09g171400.1

Transcript Overview
NameVigun09g171400.1
Unique NameVigun09g171400.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1778
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:34122890..34127649 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL368Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL177Pisum sativum Cameor genome v1aPisum sativum
psvuL497Pisum sativum Cameor genome v1aPisum sativum
psvuL505Pisum sativum Cameor genome v1aPisum sativum
crvuL573Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL713Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL787Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuL0650Cicer arietinum ICC 4958 genome v2Cicer arietinum
caivuL0660Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL455Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0470Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL0954Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0202Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0322Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0369Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0641Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0773Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1209Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL537Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR640Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR675Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL101Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL093Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL314Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL291Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL405Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL409Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL831Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR455Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL404Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL150Cicer arietinum
carvuL411Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL438Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR807Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR851Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL295Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL322Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL624Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL693Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR512Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr09.1971Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_06578.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_014643106.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
LR48_mrnaVigan04g184200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Ca_13272.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Ca_11174Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat5g135800.1Pisum sativum Cameor genome v1aPisum sativum
Psat05G0394400-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
PvulFLAVERTChr09.280Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigan.02G126600.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.02G096700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058927698.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.009G026300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vfaba.Tiffany.R1.2g067960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_12670Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_009220Cajanus cajan Asha genome v1.0Cajanus cajan
jg52673.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vum_02G01035.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va04G056600.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.2g083040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Cr_12646.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g171400.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g171400Vigun09g171400_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g171400.1_Vu_IT97K-499-35_v1.1Vigun09g171400.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide
Vigun09g171400.1Vigun09g171400.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g171400.1.v1.1.five_prime_UTR.1Vigun09g171400.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g171400.1.v1.1.CDS.1Vigun09g171400.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g171400.1.v1.1.CDS.2Vigun09g171400.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g171400.1.v1.1.CDS.3Vigun09g171400.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g171400.1.v1.1.three_prime_UTR.1Vigun09g171400.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_THEEB (Protein GrpE OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=grpE PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 4.558e-32
Identity = 69/160 (43.12%), Postives = 102/160 (63.75%), Query Frame = 1 
Query:  376 LIQNVSSLSADKAT-------SKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGP 834
            L++ +++L A KA+          +Y+RL ADF+NFRKR+ +E+  ++   +  +I  LL +VDSFE  +   +  TE E+KI  SYQG+YKQ VE L+   VS +   GKPF+P  HEA+ RE + E  +G +I+E +RG++L DRVLR A VKV+  P
Sbjct:   76 LLEQIAALEAAKASLSQVVEERNSQYIRLAADFENFRKRTQREKEELELQIKCSVIADLLPVVDSFELARTHIQTETEAEEKIHRSYQGVYKQLVECLKRIGVSAMQAKGKPFDPNLHEAVLREATNEHPEGTVIEELKRGYMLGDRVLRHAMVKVAAPP 235
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNSC (Protein GrpE OS=Synechococcus sp. (strain CC9605) OX=110662 GN=grpE PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 3.376e-31
Identity = 68/164 (41.46%), Postives = 106/164 (64.63%), Query Frame = 1 
Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
             +R  +L Q +S+L  +  T   +Y+R+ ADFDNFRKR  ++    Q D +++L+     ++L +VD+FE+ +QQ     E+ + +  SYQG+YKQ VEVL+   V+ +  VG+ F+P  HEA+ REES+EF + ++ +E +RG+    RVLR A VKVS+GPG
Sbjct:   44 ADRMQQLEQELSALKQEHDTLNSQYMRIAADFDNFRKRQSRD----QDDMRKQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVEVLKQQGVARMDVVGQEFDPNLHEAVLREESSEFAEDVVSEELQRGYHRDGRVLRHAMVKVSMGPG 203
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNPX (Protein GrpE OS=Synechococcus sp. (strain WH8102) OX=84588 GN=grpE PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 9.022e-31
Identity = 68/171 (39.77%), Postives = 108/171 (63.16%), Query Frame = 1 
Query:  337 EKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            E  +     R  +L   + +L  +  T + +Y+R+ ADFDNFRKR  ++    Q D +Q+L+     ++L +VD+FE+ +QQ    +E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA+ REESTE  + ++I+E +RG+ L  +VLR A VKVS+GPG
Sbjct:   36 EGSLTDPAERLQQLEHELQTLKQEHETLQSQYMRIAADFDNFRKRQSRD----QEDIRQQLVCSTLSEILPVVDNFERARQQLNPESEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQLFDPTLHEAVLREESTEQPEDVVIEELQRGYHLNGKVLRHALVKVSMGPG 202
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMP (Protein GrpE OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4) OX=59919 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 2.650e-30
Identity = 74/182 (40.66%), Postives = 113/182 (62.09%), Query Frame = 1 
Query:  313 DENGVALIEKGIYSAVNRKNKLIQN---VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKS 849
            D+  + + ++ IY A + KN +  N   +  L  +  T K +YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  V + F+P  HEA+ RE S EF + III+E +RG+ L  +VLR A VKVS+GPG   S
Sbjct:   36 DKQTLEVDDENIY-AEDLKNTITNNDARLEQLEKEHETLKSQYVRIAADFDNFRKRQSRDQDDLKVQLVSKALTAILPIVDNFERARQQLKPESEEAQTLHRSYQGLYKQLVEVLKQQGVSPMRVVAQQFDPKLHEAVLREPSQEFNEDIIIEELQRGYHLEGKVLRHALVKVSMGPGQQNS 216
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_SYNS9 (Protein GrpE OS=Synechococcus sp. (strain CC9902) OX=316279 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 3.239e-30
Identity = 71/179 (39.66%), Postives = 110/179 (61.45%), Query Frame = 1 
Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERP 882
             NR  +L Q ++SL  +    + +Y+R+ ADFDNFRKR  ++    Q D +Q+L+     ++L +VD+FE+ +QQ     E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA+ REE+ E  + I+ +E +RG+    RVLR A VKVS+GPG      S D + E+P
Sbjct:   48 ANRLQQLEQELNSLKQEHEAVQSQYMRIAADFDNFRKRQARD----QDDLRQQLVCSTLTEILPVVDNFERARQQLNPEGEEAQALHRSYQGLYKQLVDVLKQQGVARMEVVGQEFDPTLHEAVLREENQEHAEDIVCEELQRGYHRDGRVLRHAMVKVSMGPGPES---SSDAASEQP 219
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROM3 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9303) OX=59922 GN=grpE PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 4.138e-30
Identity = 73/184 (39.67%), Postives = 110/184 (59.78%), Query Frame = 1 
Query:  298 AFFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELI----EQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            A  N DE   +     +     R  +L Q  SSL  +  T + +Y+R+ ADFDNFRKR  ++    Q D + +LI     ++L +VD+FE+ +QQ +   E+ + +  SYQG+YKQ VEVL+   V+ +  VG+ F+P  HEA++RE S E  + ++ +E +RG+ L  RVLR A VKVS+GPG
Sbjct:   27 ASMNSDEGQPSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRD----QDDLRLQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVEVLKQLGVASMRVVGQAFDPTLHEAVSREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPG 206
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROM9 (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9312) OX=74546 GN=grpE PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.452e-29
Identity = 69/172 (40.12%), Postives = 107/172 (62.21%), Query Frame = 1 
Query:  388 VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERPSTAAGID 903
            +  L  +  T K++YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  VG+ F+P  HEA+ RE S EFK+ +I++E +RG+ L  +VLR A VKVS+G G   S       +E+ +    ID
Sbjct:   63 LEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKVQLVSKTLTAILPIVDNFERARQQLKPESEEAQALHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPNLHEAVLREPSEEFKEDLIVEELQRGYHLEGKVLRHALVKVSMGHGQQNSQ----EEVEKDTVEEDID 230
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMM (Protein GrpE OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=grpE PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.917e-29
Identity = 68/180 (37.78%), Postives = 108/180 (60.00%), Query Frame = 1 
Query:  298 AFFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPG 837
            A  N DE   +     +     R  +L Q  SSL  +  T + +Y+R+ ADFDNFRKR  +++  ++       + ++L +VD+FE+ +QQ +   E+ + +  SYQG+YKQ V+VL+   V+ +  VG+ F+P  HEA++RE S E  + ++ +E +RG+ L  RVLR A VKVS+GPG
Sbjct:   27 ASINSDEGQSSAQSAPLADNEARLQQLEQEHSSLREEHETLRSQYMRIAADFDNFRKRQSRDQDDLRFQLICTTLSEILPVVDNFERARQQLEPQGEEAQALHRSYQGLYKQLVDVLKQMGVASMRVVGQVFDPTLHEAVSREPSEEHPEDVVTEELQRGYHLNGRVLRHALVKVSMGPG 206
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_PROMS (Protein GrpE OS=Prochlorococcus marinus (strain AS9601) OX=146891 GN=grpE PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 3.973e-29
Identity = 66/154 (42.86%), Postives = 101/154 (65.58%), Query Frame = 1 
Query:  388 VSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSLGPGATKS 849
            +  L  +  T K++YVR+ ADFDNFRKR  +++  ++     + +  +L +VD+FE+ +QQ K  +E+ + +  SYQG+YKQ VEVL+   VS +  VG+ F+P  HEA+ RE S +F++  II+E +RG+ L  +VLR A VKVS+GPG   S
Sbjct:   63 LEQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERARQQLKPESEEAQSLHRSYQGLYKQLVEVLKQQGVSPMRVVGQQFDPSLHEAVLREPSEKFEEDFIIEELQRGYHLEGKVLRHALVKVSMGPGKQNS 216
[Close]
BLAST of Vigun09g171400.1 vs. DB:Swiss
Match: GRPE_GLOVI (Protein GrpE OS=Gloeobacter violaceus (strain PCC 7421) OX=251221 GN=grpE PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.168e-28
Identity = 60/157 (38.22%), Postives = 99/157 (63.06%), Query Frame = 1 
Query:  358 VNRKNKLIQNVSSLSADKATSKDRYVRLQADFDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFXXXXXXXXXXXXXXXXIDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKGIIIKETRRGFLLRDRVLRPAQVKVSL 828
            + R ++L    S L    A  + +Y RL ADFDNFRKR+ +E+  +      +L++ +L + D+F++ +   +   E+E+K+  SYQ +Y+QF+ VL    V+ +  +G+PF+P QHEAI REES    +  ++ E ++G+LL D+VLRPA VKV++
Sbjct:   35 IARIDQLAAENSDLQKKLADYEQKYTRLMADFDNFRKRTQREKDELAYFVSAKLLKDILPVFDNFDRARAFAQPDNEREEKLHNSYQQVYRQFLSVLEKMGVTAMEAIGQPFDPAQHEAILREESAGVSQETVVAELQKGYLLADKVLRPAMVKVAI 191
The following BLAST results are available for this feature:
BLAST of Vigun09g171400.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
GRPE_THEEB4.558e-3243.13Protein GrpE OS=Thermosynechococcus elongatus (str... [more]
GRPE_SYNSC3.376e-3141.46Protein GrpE OS=Synechococcus sp. (strain CC9605) ... [more]
GRPE_SYNPX9.022e-3139.77Protein GrpE OS=Synechococcus sp. (strain WH8102) ... [more]
GRPE_PROMP2.650e-3040.66Protein GrpE OS=Prochlorococcus marinus subsp. pas... [more]
GRPE_SYNS93.239e-3039.66Protein GrpE OS=Synechococcus sp. (strain CC9902) ... [more]
GRPE_PROM34.138e-3039.67Protein GrpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROM91.452e-2940.12Protein GrpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROMM1.917e-2937.78Protein GrpE OS=Prochlorococcus marinus (strain MI... [more]
GRPE_PROMS3.973e-2942.86Protein GrpE OS=Prochlorococcus marinus (strain AS... [more]
GRPE_GLOVI1.168e-2838.22Protein GrpE OS=Gloeobacter violaceus (strain PCC ... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000740GrpE nucleotide exchange factorPRINTSPR00773GRPEPROTEINcoord: 173..188
score: 26.37
coord: 255..274
score: 46.56
coord: 145..161
score: 45.22
coord: 228..243
score: 41.41
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 121..275
e-value: 2.0E-38
score: 131.7
IPR000740GrpE nucleotide exchange factorPROSITEPS01071GRPEcoord: 231..274
IPR000740GrpE nucleotide exchange factorHAMAPMF_01151GrpEcoord: 65..276
score: 15.522
IPR000740GrpE nucleotide exchange factorCDDcd00446GrpEcoord: 141..274
e-value: 6.86987E-42
score: 139.563
IPR013805GrpE nucleotide exchange factor, coiled-coilGENE3D3.90.20.20coord: 106..218
e-value: 1.5E-19
score: 71.7
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 126..219
IPR009012GrpE nucleotide exchange factor, headGENE3D2.30.22.10coord: 221..275
e-value: 2.4E-17
score: 64.4
IPR009012GrpE nucleotide exchange factor, headSUPERFAMILY51064Head domain of nucleotide exchange factor GrpEcoord: 222..276
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..303

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=mRNA; length=1778bp
taaaaataaaacaaaGAAACTTGGTCTGGAGTTTGGAGAAACCACACAAA
TACGCATCCAAGAACATTCCAGAACCCACTGTCACACACTATCTCTGTTT
TGTTACGCTCTGACTGCTGAAGGAGCACAAGAGAAGAGAATCCATCAATG
GCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTCTAC
TCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATATCTT
TTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGAAGA
AACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGGAAATGATGAGAC
AGGTGAGACCCGGAAAGATTTCAGAGGGATAGACGGTGATGGAGATAAAA
AACCATTACCCAGTTTAATGGTCCTCGTTGAAGCATACAAAGAAGCCTTT
TTTAATGGTGATGAAAATGGTGTTGCTCTGATTGAAAAGGGAATATATTC
AGCTGTAAATAGAAAAAATAAATTGATTCAGAATGTATCAAGTTTATCAG
CAGACAAAGCTACTTCCAAGGATAGATATGTTCGATTACAAGCTGATTTT
GACAATTTTAGGAAAAGGTCCGACAAAGAAAGACTTAGCATCCAATCTGA
TGCCCAACAAGAACTCATTGAACAGCTTTTGTTGATGGTGGACAGTTTTG
AAAAAACAAAACAGCAAACTAAAGCAGCAACAGAGAAAGAGAAGAAAATT
GATGTTAGCTATCAAGGAATTTACAAACAATTTGTAGAGGTTCTGAGGAG
TCATCATGTTTCAGTGATAGCAACAGTGGGCAAGCCGTTTAATCCCTTGC
AACATGAAGCCATTGCACGTGAGGAGTCAACAGAGTTCAAGAAAGGGATT
ATAATTAAAGAAACACGACGTGGTTTCTTGCTCAGAGATCGAGTTCTAAG
GCCAGCCCAGGTGAAGGTTTCATTAGGTCCTGGAGCTACGAAATCTCCTG
TGTCTCCTGACAACTCCATGGAGCGACCTTCAACAGCTGCTGGAATAGAT
GAAAGATAGTCTCTTCAACTTTCTTACTTATTAAAAGTCTAGCTCCTCCT
GCAAACATGATGTCTTTACATTGGTCAACTTGAAATGCTTCTAGTATTCA
ATATTTTGGTACTTGGGCCGTAGGTGAGTGTAGTCCCTTGGACCTAGCAA
ATTTCACACCACACTTGAATTTTTGAGAAAGGGAATTAATTTTGTTCATG
AGAGAACAATGAGTTTCTTGTGTAATCCATTTTTAACCAAAAGCAAAAAA
ACGGTTCATTCTTGAGCTCTTCTGCCATTTTTTTTCCTTGTCTCAATACT
AAGAAAGCTAGACTGCAGGAACGCCTTGTAGCCAACCAAAAATCAACTGC
ATTTTGAGTTCTAAAGTGAAGCTCACATGGAGTAGAACTTGTAAGTGATA
GTAGTTGATTTTATTGAAGAGATTCACACTATGACTGGCTGTATGAAAAG
ATGATATTGGGAATCATGGTTTCACAGTATCATATTATGGTTCCTGGTCT
TTTGGTATTATGTGTTATGTTTATAACACGTCACAATTTTGATTAAGTTC
TTATCGTTCCTACCTTCTTGTTTGCACCTCTAATGTGTATTTTACATTAT
CATGGACATTGGTAAGTTCTTATACACTTGTATTTTTAATACTAGATAGT
CTTCATTAAATTATAGTGTCTTAAATACCAAGCTTATACGAAACTTACTG
TAAGTTGTCTTTTATGGGTATTGAGATT
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protein sequence of Vigun09g171400.1_Vu_IT97K-499-35_v1.1

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=304bp
MATFLSNQSLLAPCPCSTPFSSNPFQTLKPKIISFSSRGFPSPLNSSPNR
RNPLKYSQGPPPTGNDETGETRKDFRGIDGDGDKKPLPSLMVLVEAYKEA
FFNGDENGVALIEKGIYSAVNRKNKLIQNVSSLSADKATSKDRYVRLQAD
FDNFRKRSDKERLSIQSDAQQELIEQLLLMVDSFEKTKQQTKAATEKEKK
IDVSYQGIYKQFVEVLRSHHVSVIATVGKPFNPLQHEAIAREESTEFKKG
IIIKETRRGFLLRDRVLRPAQVKVSLGPGATKSPVSPDNSMERPSTAAGI
DER*
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mRNA from alignment at Vu09:34122890..34127649+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=mRNA; length=4760bp; location=Sequence derived from: Vu09:34122890..34127649+ (Vigna unguiculata
TAAAAATAAAACAAAGAAACTTGGTCTGGAGTTTGGAGAAACCACACAAA
TACGCATCCAAGAACATTCCAGAACCCACTGTCACACACTATCTCTGTTT
TGTTACGCTCTGACTGCTGAAGGAGCACAAGAGAAGAGAATCCATCAATG
GCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTCTAC
TCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATATCTT
TTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGAAGA
AACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGTACGCTCTCACTC
CTTCAAATCTTACACTCTTCTCATTTTTTTATAATTAATTATTCTTATTT
ACTGCTTATTGGATTCCTATCACGCCCCATTATATTGCTTCAAAATTATT
AATCACCAGAGAGTCAATTGAATCAAAACATGAGAGTCAGCATTTTCCTT
TTTGTAATTTCTAATAAATTTCATATAGTAAGAGGGGGTGAGTTAAAAAT
GGATTATTGTGTTGCTTGCATTTCTTATAGTCTTAATAGACATTGAATCC
TCAATGTTTATTAATTGCCTTCTTGTACCTCTGATGCTTGGTCTCTTCCA
CTATCGATTGCAGGAGGGTATCCTTATACAAAAATAAAATAAAATAGAAC
AATAGTGTTACTTAAAATTTCCCATTTTATTTTATTTTTATAAATATTGT
TGTTACCCTTCAGAACTGCATGTGGTCAAAGTACTAGCTTTCGTAATGTT
TGTTAAGTTTAAGGTGCAGTTGGATATTTTTGTTTCATTTGTTGAAGATG
CTATGTTTTATATTTATGTACCTAACCTAGCCAAATCTTCTCTCTTTTGT
CCTTCCTAGGGAAATGATGAGACAGGTGAGACCCGGAAAGATTTCAGAGG
GATAGACGGTGATGGAGATAAAAAACCATTACCCAGTTTAATGGTCCTCG
TTGAAGCATACAAAGAAGCCTTTTTTAATGGTGATGAAAATGGTGTTGCT
CTGATTGAAAAGGGAATATATTCAGCTGTAAATAGAAAAAATAAATTGAT
TCAGAATGTATCAAGTTTATCAGCAGACAAAGCTACTTCCAAGGATAGAT
ATGTTCGATTACAAGCTGATTTTGACAATTTTAGGAAAAGGTCCGACAAA
GAAAGACTTAGCATCCAATCTGATGCCCAACAAGAACTCATTGAACAGCT
TTTGTTGATGGTGGACAGTTTTGAAAAAACAAAACAGCAAACTAAAGCAG
CAACAGAGAAAGAGAAGAAAATTGATGTTAGCTATCAAGGAATTTACAAA
CAATTTGTAGAGGTTCTGAGGAGTCATCATGTTTCAGTGATAGCAACAGT
GGGCAAGCCGTTTAATCCCTTGGTAAGTTAAATTTACAAAAACCTTTGGT
CTTGTGTGCGGAATTTCTTTCCTTTTGTTCTGAGTTGCTACTTGATGACT
GTGAAATCCAACAAATTCTATTGCTACTCTACACAAAACAAATAATTTGA
GTATAATGGTGCCATAGGAAATGAAATTAGGTAAAATAATAATTAAACCA
ATGAGCAAAATAATGTAAATGATGAAATTCAATAATGTAATCTTAACACT
GATCATAAACAGTTTCAAATGGCAATCTATGGTAACACACCTCAGCTGCG
GGGACAGCCATGATGTGTGTTTATTCCCAAAAGGCCTCTGAAGACGTTTG
AGCTTGTTTGGAACGGGGGTTAAAATTTTTGGGATTTGAATTTCCCAAAA
GTGAAAGCTTAAACTGTAGTGTAGTGAAAATGATAAAGATGACTTGGATT
TTGAAGGTTATGACCCTTGTATTTATCTCCATCACCGTCTATCCCTCTGA
CTTTTCATGATTTATTATGAGTGCCATGAATTTTTAATAATTTTTAAGAA
GTTATATGTCCATAGTATGCAGTATAAGCTATATAAATAAATTTAGGAAT
AATGACTATCCGACTATAGCATTTTTTCAGATTTAAGATGGACCTTTTTA
CCTTTAAATATTTTGTTCTAGTTGTGAACAAGCTTTAACAATCCATGCTT
TGCTACTTTTTTGATGAGCAAACTCATTGGTCATTTCCTTTATTAAAAAA
CAACCCTAGAAAAAAAATTAGGATTTAGTATACCAGTAGCCTTAAAATTA
GAGACAGATTTCTAGCCAACAATGTTGGTATTGCAAACAATTTCGATGCA
TCAATTTCTTTTGCTGTGTTCGATGCTAGACGATCATTTTCTCAAGCTTT
TACTTATGTCAATGAGTGAGAACAGTAGTAGATTTAGTTCAAGAGTTTGA
TCTTCCCCCAAAAAAAAGGGATATAGAGGGGTAAGGGTCCTTTCTTTTGT
TGTTGCACTGAACTAAGTAAGTGTCCTCTTCTCAGAGAGGAGGAGTTGCC
TAAACCTAAAGGATTAGTTCCTCGAGTCTAGTTAGCTCGACAGCTTAACA
CGAATAACGCGCGAGCTTTCCTCGACTATAGCGCGAGTAGAGTCACCACC
TACCACTAAAAGGAAAAGGAAGTGCAGTGATTTCAGGATACACGGATATA
ATTTCTTATACTTGCCCTTTTTTTCTTTAAAAAGGCGTTCATTGATCTGT
AATTTTCTAGGAGTCTGGATCAAATAAATATGTAGAGTACCTTGTACAAT
GAGTGATTAAATTTGGGAGCAGCTTTGCTCTTTAGGTCACTTTATTATAA
TTTGCTTTTAGGGAGATATTGCATCAGTATTGCAATATTTGAATCACTAT
TTACTTCCTTTTGGTTTTGGATTTATGGTGATAAGGTGCACAACTGCTCA
TGATGCACTTGGTCTCACAACTAACATTTTTAATTGATAAAAAAAATCCA
TTAAATGGGATGTTATATCTAATGCCTTGACGAGGTCAGGTTGAAATTAA
ATTTTTGGCCCTTGTCTGTTTTCTGTTCAACAACAATTTTCTCTTTTCTA
CTCTCCGAACATTTGAAAGTGTTTGTTCCCAAAGCAAAATTCTGTTTCTA
AAAGAGTGGTGTCTTGATTCCTGAACAGAGCACCTTAAGAAAATAGAAAG
AAAAATAGGATGAGATAAGATCTTTGTTTTGGAAATACTTATCAGAACTT
TTTGAACAAGAAATTAATTACTGAGGAGGGTGAAATTGTTTTATAAAACG
TGAAACAAAAAGGGGAGAGGGGAATTAACGGACTCTAGGTTTTTTCTTTT
AATTTTCTTATAGCAAGTGTGATTCTTCTATTGGTTGTCCCATGACAATC
CCCAAGATTACACATTGCCTTTGAACCGAACTCTTGTGGTAAAGGAACAC
AGGTTGAACTTTAAACATATAATCCACTATGGGTAACTACGGTAAACACC
TTTGAGATTTGTGTTTATGAATTATTACACTTGCATTCTTTTTTATTGAA
AAATTGCACTGACCTTCTCTACTCATTTCTGTTATTTTGAGCTATCATGG
GTATGGTTCATGCGTAGAAATTGGTAGATATGTGTACTATTTTTTTAATA
ACAGGTGTCACGTGTAAAAATAATGCATGAGGTAGGGACGAGGGTGGAAT
TTTCCGATCAGGAAAGGTTAAGTGTGAAATATTGTTGTATTCATAGGTTT
GGCTGGTTTGATTTTCCTCATTTTACCCATCTTAAGAGAGTTTTCATTGC
AATATAAGCTTGAAACTAAAATGTGTGGTTTGTTCCTGCTTGTTGAAGAC
ATTTTAATGAAACCTTAGAGAAAGTTACCACGTAGTGACTTGGCTATTGT
TTAATCTGTTTGTGGTTTACTTTTGTCACAGCAACATGAAGCCATTGCAC
GTGAGGAGTCAACAGAGTTCAAGAAAGGGATTATAATTAAAGAAACACGA
CGTGGTTTCTTGCTCAGAGATCGAGTTCTAAGGCCAGCCCAGGTGAAGGT
TTCATTAGGTCCTGGAGCTACGAAATCTCCTGTGTCTCCTGACAACTCCA
TGGAGCGACCTTCAACAGCTGCTGGAATAGATGAAAGATAGTCTCTTCAA
CTTTCTTACTTATTAAAAGTCTAGCTCCTCCTGCAAACATGATGTCTTTA
CATTGGTCAACTTGAAATGCTTCTAGTATTCAATATTTTGGTACTTGGGC
CGTAGGTGAGTGTAGTCCCTTGGACCTAGCAAATTTCACACCACACTTGA
ATTTTTGAGAAAGGGAATTAATTTTGTTCATGAGAGAACAATGAGTTTCT
TGTGTAATCCATTTTTAACCAAAAGCAAAAAAACGGTTCATTCTTGAGCT
CTTCTGCCATTTTTTTTCCTTGTCTCAATACTAAGAAAGCTAGACTGCAG
GAACGCCTTGTAGCCAACCAAAAATCAACTGCATTTTGAGTTCTAAAGTG
AAGCTCACATGGAGTAGAACTTGTAAGTGATAGTAGTTGATTTTATTGAA
GAGATTCACACTATGACTGGCTGTATGAAAAGATGATATTGGGAATCATG
GTTTCACAGTATCATATTATGGTTCCTGGTCTTTTGGTATTATGTGTTAT
GTTTATAACACGTCACAATTTTGATTAAGTTCTTATCGTTCCTACCTTCT
TGTTTGCACCTCTAATGTGTATTTTACATTATCATGGACATTGGTAAGTT
CTTATACACTTGTATTTTTAATACTAGATAGTCTTCATTAAATTATAGTG
TCTTAAATACCAAGCTTATACGAAACTTACTGTAAGTTGTCTTTTATGGG
TATTGAGATT
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Coding sequence (CDS) from alignment at Vu09:34122890..34127649+

>Vigun09g171400.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g171400.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g171400.1; organism=Vigna unguiculata; type=CDS; length=912bp; location=Sequence derived from: Vu09:34122890..34127649+ (Vigna unguiculata
ATGGCTACTTTCCTCTCCAATCAATCTCTGTTGGCTCCTTGTCCTTGTTC
TACTCCCTTCTCTTCAAACCCCTTTCAAACCCTAAAACCCAAAATCATAT
CTTTTTCATCTCGTGGGTTTCCAAGTCCCCTAAATTCCTCTCCCAATCGA
AGAAACCCGTTGAAGTATTCTCAAGGTCCCCCTCCAACTGGAAATGATGA
GACAGGTGAGACCCGGAAAGATTTCAGAGGGATAGACGGTGATGGAGATA
AAAAACCATTACCCAGTTTAATGGTCCTCGTTGAAGCATACAAAGAAGCC
TTTTTTAATGGTGATGAAAATGGTGTTGCTCTGATTGAAAAGGGAATATA
TTCAGCTGTAAATAGAAAAAATAAATTGATTCAGAATGTATCAAGTTTAT
CAGCAGACAAAGCTACTTCCAAGGATAGATATGTTCGATTACAAGCTGAT
TTTGACAATTTTAGGAAAAGGTCCGACAAAGAAAGACTTAGCATCCAATC
TGATGCCCAACAAGAACTCATTGAACAGCTTTTGTTGATGGTGGACAGTT
TTGAAAAAACAAAACAGCAAACTAAAGCAGCAACAGAGAAAGAGAAGAAA
ATTGATGTTAGCTATCAAGGAATTTACAAACAATTTGTAGAGGTTCTGAG
GAGTCATCATGTTTCAGTGATAGCAACAGTGGGCAAGCCGTTTAATCCCT
TGCAACATGAAGCCATTGCACGTGAGGAGTCAACAGAGTTCAAGAAAGGG
ATTATAATTAAAGAAACACGACGTGGTTTCTTGCTCAGAGATCGAGTTCT
AAGGCCAGCCCAGGTGAAGGTTTCATTAGGTCCTGGAGCTACGAAATCTC
CTGTGTCTCCTGACAACTCCATGGAGCGACCTTCAACAGCTGCTGGAATA
GATGAAAGATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil
IPR009012GrpE_head
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051087protein-folding chaperone binding
GO:0042803protein homodimerization activity
GO:0000774adenyl-nucleotide exchange factor activity