Vigun09g173200.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP24_ARATH (Heavy metal-associated isoprenylated plant protein 24 OS=Arabidopsis thaliana OX=3702 GN=HIPP24 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 2.345e-79 Identity = 118/151 (78.15%), Postives = 136/151 (90.07%), Query Frame = 1 Query: 1 MGVQGTLEYFSDLLSSTXXXXXXXQMQTVALKI-RMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVADTANVSETTVDDRYVQIFSDENPNACSIM 450 MGV+GT+EY SDLL K+KKKK QMQTVAL++ R+DCEGC RK+KHVLSGVKG KSV+VD+K QK TVTGY++ KKVL+AA+STKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKV DTA+V+ETTVDD Y +FSDENPN+C+IM Sbjct: 1 MGVEGTMEYISDLLKKRKRKKKK-QMQTVALRVARIDCEGCERKIKHVLSGVKGVKSVDVDVKLQKVTVTGYIDPKKVLEAAKSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVPDTASVNETTVDDSYTIMFSDENPNSCAIM 150
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP23_ARATH (Heavy metal-associated isoprenylated plant protein 23 OS=Arabidopsis thaliana OX=3702 GN=HIPP23 PE=1 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 2.868e-52 Identity = 95/160 (59.38%), Postives = 117/160 (73.12%), Query Frame = 1 Query: 1 MGVQGTLEYFSDLLS-----STXXXXXXXQMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVADTANVSETTV-----DDRYVQIFSDENPNACSIM 450 MGV GTLEY S+L+ S K+KKKKQ QTV LK+RMDC+GC K+K+ LS +KG K+VE++ KQQK TV+GY +A KVLK A++T KK E+WPYVPY +VA PYI+QAYDKKAPP VRKV NV+ T+ D Y +FSD+NPNACSIM Sbjct: 1 MGVGGTLEYISELIGNGGSHSYGKRKKKKQFQTVELKVRMDCDGCVLKIKNSLSSLKGVKTVEINKKQQKVTVSGYADASKVLKKAKATGKKAEIWPYVPYNLVAQPYIAQAYDKKAPPGYVRKV--DPNVTTGTMAVYYDDPSYTSLFSDDNPNACSIM 158
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 5.108e-52 Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 1 Query: 13 GTLEYFSDLLS-----STXXXXXXXQMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQST-KKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVADTANVSETTVDDRYVQIFSDENPNACSIM 450 G L Y S+ S S +K+KK+K MQTV +K+++DC+GC RK+K+ +S +KGAKSVEV+ K K TV+GYV+ KKVLK QST KKK ELWPYVPYTMVA PY + AYDK+APP VRK ++ A + DD+ + +FSDENPNAC++M Sbjct: 2 GALNYLSEYFSNHFYVSIRKRKKRKVMQTVNIKVKIDCDGCERKIKNAVSSIKGAKSVEVNRKMHKVTVSGYVDPKKVLKTVQSTGKKKAELWPYVPYTMVAYPYAAGAYDKRAPPGFVRK-SEQAQAQPGSTDDKLMSLFSDENPNACTVM 152
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 5.792e-47 Identity = 80/152 (52.63%), Postives = 105/152 (69.08%), Query Frame = 1 Query: 1 MGVQGTL-EYFSDLLSSTXXXXXXXQMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVADTA-NVSETTVDDRYVQIFSDENPNACSIM 450 MG +L EY SD T+K++K+K MQTV +K++MDC+GC R+VK+ +S +KG KSVEV+ K K TV+GYVE KKVLK + T KK E+WPYVPY MVA PY YDKKAP VRK + + ++ Y+ +FSDENPNAC++M Sbjct: 1 MGALDSLSEYISDYFRVTRKRRKRKVMQTVNIKVKMDCDGCERRVKNAVSSMKGVKSVEVNRKIHKVTVSGYVEPKKVLKRIERTGKKAEIWPYVPYNMVAYPYAVGTYDKKAPAGYVRKSEQSQLQLLPGAPENHYISLFSDENPNACTVM 152
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX=3702 GN=HIPP26 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.409e-41 Identity = 77/154 (50.00%), Postives = 100/154 (64.94%), Query Frame = 1 Query: 13 GTLEYFSDLL--SSTXXXXXXXQMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVL-KAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVAD-----TANVSETTVDDRYVQIFSDENPNACSIM 450 G L++ S++ S K KK+KQ+QTV +K++MDCEGC RKV+ + G+KG SV ++ K K TV GYV+ KV+ + + T KKVELWPYVPY +VA+PY + YDKKAP VR+V D A S T V RY FSDENP AC +M Sbjct: 2 GVLDHVSEMFDCSHGHKIKKRKQLQTVEIKVKMDCEGCERKVRRSVEGMKGVSSVTLEPKAHKVTVVGYVDPNKVVARMSHRTGKKVELWPYVPYDVVAHPYAAGVYDKKAPSGYVRRVDDPGVSQLARASSTEV--RYTTAFSDENPAACVVM 153
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX=3702 GN=HIPP27 PE=1 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 5.249e-38 Identity = 67/133 (50.38%), Postives = 83/133 (62.41%), Query Frame = 1 Query: 73 QMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVL-KAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRK------VADTANVSETTVDDRYVQIFSDENPNACSIM 450 Q Q V +K++MDCEGC R+V+ + G+KG V VD KQ K TV G+V+ KV+ + T KK ELWPYVPY +V +PY AYDKKAPP VR VA A S V +Y FSD+NPNAC+IM Sbjct: 17 QFQKVEIKVKMDCEGCERRVRKSVEGMKGVSKVTVDPKQSKLTVEGFVQPSKVVHRVMHRTGKKAELWPYVPYEVVPHPYAPGAYDKKAPPGYVRNALADPLVAPLARASSFEV--KYTSAFSDDNPNACTIM 147
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP25_ARATH (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX=3702 GN=HIPP25 PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 2.657e-33 Identity = 62/152 (40.79%), Postives = 91/152 (59.87%), Query Frame = 1 Query: 13 GTLEYFSDLLS-STXXXXXXXQMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVL-KAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVADTANVSE----TTVDDRYVQIFSDENPNACSIM 450 G L++ S+ S K+ K +QTV +++ +DCEGC RKV+ L G++G + V ++ QK TV GYVE KV+ + T K+ EL+P+VPY +VA+PY S YD +AP VR +VS ++ + RY FSDEN +AC +M Sbjct: 2 GVLDHVSEYFDCSHGSSKRHKSLQTVDVRVLIDCEGCERKVRRALEGMRGIRDVTIEPNAQKVTVVGYVEPNKVVARIIHRTGKRAELYPFVPYDVVAHPYASGVYDNRAPTGYVRNTEYDPHVSRLARASSTEVRYTTAFSDENASACVVM 153
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana OX=3702 GN=HIPP21 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.660e-32 Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 1 Query: 13 GTLEYFSDLLSSTXXXXXXXQ--MQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPYVPYTMVANPYISQAYDKKAPPNMVRKVAD---TANVSETTVDDRYVQIFSDENPN-ACSIM 450 G +Y S S T K K+ +QTV +K++MDC+GC R+V++V+ +KG KSVEV+ KQ + TV G+V+ KVLK +ST KK E WPY+P MV P+ YDK+AP +R TAN E + YV +FSD+N + ACSIM Sbjct: 2 GAFDYISSFCSYTYANAKTKRKPLQTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGKKAEFWPYIPQHMVYYPFAPGMYDKRAPAGHIRNPTQSFPTANAPE----ENYVSLFSDDNVHAACSIM 149
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP28_ARATH (Heavy metal-associated isoprenylated plant protein 28 OS=Arabidopsis thaliana OX=3702 GN=HIPP28 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.511e-24 Identity = 56/151 (37.09%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 73 QMQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELW--PYVPYTMVA---------NPYISQAYDKKAPP------NMVRKVADTANVSETTVDDRYVQI--------FSDENPNACSIM 450 Q+QT+ +++ MDC GC +VK+ L ++G +VE+D+ QQK TVTGY + KKVLK + T ++ ELW PY P M NP A P N + D+ + S + I FSDENPNACSIM Sbjct: 9 QLQTIEMRVHMDCVGCESRVKNALQKMRGVDAVEIDMVQQKVTVTGYADQKKVLKKVRKTGRRAELWQLPYNPDHMGGSSSNGGYFYNPQGCNGPINHAAPVPTSSYNYYKHGYDSNDYSSYRHHPVHASIFSHQTGSKFSDENPNACSIM 159
BLAST of Vigun09g173200.1 vs. DB:Swiss
Match: HIP30_ARATH (Heavy metal-associated isoprenylated plant protein 30 OS=Arabidopsis thaliana OX=3702 GN=HIPP30 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.908e-23 Identity = 52/134 (38.81%), Postives = 78/134 (58.21%), Query Frame = 1 Query: 76 MQTVALKIRMDCEGCARKVKHVLSGVKGAKSVEVDLKQQKATVTGYVEAKKVLKAAQSTKKKVELWPY--VP--YTMVANPYISQAYDKKAPPNMVRK---VAD-TANVSETTV-DDRYVQIFSDENPNACSIM 450 +QT+ LK+RM C GC R VKH + ++G SVEV+L+ ++ TV GYVE KKVLKA + K+ E WPY +P +T + + + + N R ++D N+ T DD+ F+D+N +ACS+M Sbjct: 45 LQTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGKRAEFWPYPDMPRYFTSSDHYFKDTTREFRESYNYYRHGYNLSDRHGNIHVTNRGDDKMSNFFNDDNVHACSLM 178 The following BLAST results are available for this feature:
BLAST of Vigun09g173200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g173200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g173200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g173200.1; organism=Vigna unguiculata; type=mRNA; length=991bpback to top protein sequence of Vigun09g173200.1_Vu_IT97K-499-35_v1.1 >Vigun09g173200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g173200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g173200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=151bpback to top mRNA from alignment at Vu09:34339250..34340327+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g173200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g173200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g173200.1; organism=Vigna unguiculata; type=mRNA; length=1078bp; location=Sequence derived from: Vu09:34339250..34340327+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:34339250..34340327+ >Vigun09g173200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g173200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g173200.1; organism=Vigna unguiculata; type=CDS; length=453bp; location=Sequence derived from: Vu09:34339250..34340327+ (Vigna unguiculataback to top |