Vigun09g174100.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ6_ARATH (FCS-Like Zinc finger 6 OS=Arabidopsis thaliana OX=3702 GN=FLZ6 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.391e-39 Identity = 80/174 (45.98%), Postives = 99/174 (56.90%), Query Frame = 1
Query: 1 MLLGKRPRPPMKRTTSMSEITFDLNTTLDEDVQNNPVKGGLGPDPWTKHPPPVGSNG-------------LDQSRVWALVSPR-NHRRHSEDSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVAATPSGSQVRSTKGETLVAL 480
MLLGKR RPP+ RTTS+SEI FDLN + + N P P GSNG LDQ R+ ++V+PR N RRHS D + FLR C LC+R LVP RDIYMYRGD AFCSSECR++QM QDERK+ K +K+ P ++ + KG A+
Sbjct: 1 MLLGKRQRPPINRTTSLSEIKFDLNLPSESEPSNQQ-------KPTVASP--YGSNGQAVTAAVDQNRGFLDQ-RLLSMVTPRGNLRRHSGDFSDAGHFLRSCALCERLLVPGRDIYMYRGDKAFCSSECRQEQMAQDERKEKGKSAAPAKEPAVTAP--ARAKPGKGRAAAAV 162
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ5_ARATH (FCS-Like Zinc finger 5 OS=Arabidopsis thaliana OX=3702 GN=FLZ5 PE=1 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.117e-36 Identity = 76/151 (50.33%), Postives = 98/151 (64.90%), Query Frame = 1
Query: 1 MLLGKRPRPPMKRTTSMSEITFDLNTTLDEDVQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVWALVSPR-NHRRHSEDSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVA-ATPSGSQV 447
MLLGKR RPP+KRTTS+SEI FDLN +++ ++ ++ + D + V LDQ R+ A+VSPR RRHS D ++ +FLR C LCKR LV RDIYMYRGD AFCS ECR++Q+ DERK+ K V S VA T +G +V
Sbjct: 1 MLLGKRQRPPIKRTTSLSEIKFDLNQPSEQEPSDHQIQL-VNVDEHRQ----VHQRLLDQ-RLLAMVSPRGTQRRHSSD--YSEDFLRSCSLCKRLLVHGRDIYMYRGDRAFCSLECRQQQITVDERKEKKKGSVRSTIVVATGTTTGERV 143
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ7_ARATH (FCS-Like Zinc finger 7 OS=Arabidopsis thaliana OX=3702 GN=FLZ7 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.056e-25 Identity = 56/145 (38.62%), Postives = 75/145 (51.72%), Query Frame = 1
Query: 1 MLLGKRPRPPMKRTTSMSEITFDLN----TTLDEDVQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVWALVSPRNHRRHSE---DSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKK 414
MLLG RPRP M+RT S++ IT +++ D DV V GG ++ +SP NH+R+ + FL C CKR L P RDIYMY+GD+AFCS ECRE+QM+ DE K N+ ++ K
Sbjct: 1 MLLGNRPRPQMQRTASITRITIEVDGDQTAGQDSDVSMTVVDGG-------------------ENYAQRFLSPVNHQRNERKYGGRSSPSSFLVNCGFCKRGLAPGRDIYMYKGDAAFCSIECREQQMEHDEGKTRNRVVLSPSK 126
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: IRM1_ARATH (Protein INCREASED RESISTANCE TO MYZUS PERSICAE 1 OS=Arabidopsis thaliana OX=3702 GN=IRM1 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.347e-18 Identity = 53/139 (38.13%), Postives = 66/139 (47.48%), Query Frame = 1
Query: 1 MLLGKRPRPPMKRTTSMSEITFDLNTTLDEDVQNNPVKGGLGPDPWTKHPPPVGSNGLDQSRVWALVSPRNHRRHSEDSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQ 417
M+LGKR +KRTTSM IT D T D D T H P H +++ +FL+ C LC R L RDIYMYRG++AFCS ECREKQ+K DE+K K G + K+
Sbjct: 1 MVLGKRHGSLIKRTTSMKMITLDTPTIYD---------ASQPSDHLTFHQHP-------------------HNPMVVMASNYDDFLKTCSLCNRSLCHHRDIYMYRGNNAFCSLECREKQIKLDEKK--AKTGFVTSKK 109
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ15_ARATH (FCS-Like Zinc finger 15 OS=Arabidopsis thaliana OX=3702 GN=FLZ15 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.008e-15 Identity = 34/55 (61.82%), Postives = 40/55 (72.73%), Query Frame = 1
Query: 211 NHRRHSEDSAHTPEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDE 375
N RR +DS FL CFLC+R+L+PA+DIYMY+GD AFCS ECR KQM DE
Sbjct: 58 NLRRCYQDSG----FLEHCFLCRRKLLPAKDIYMYKGDRAFCSVECRSKQMIMDE 108
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ2_ARATH (FCS-Like Zinc finger 2 OS=Arabidopsis thaliana OX=3702 GN=FLZ2 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.183e-14 Identity = 35/71 (49.30%), Postives = 46/71 (64.79%), Query Frame = 1
Query: 247 PEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVAATPSGSQVRSTK 459
P FL CFLCK+RL RDI+MYRGD+ FCS ECRE+Q+++DE K+ KKQ +T + R+ K
Sbjct: 74 PHFLDSCFLCKKRLGDNRDIFMYRGDTPFCSEECREEQIERDEAKE--------KKQSLSTSVKAMRRNEK 136
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ1_ARATH (FCS-Like Zinc finger 1 OS=Arabidopsis thaliana OX=3702 GN=FLZ1 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 1.377e-12 Identity = 28/46 (60.87%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 247 PEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKD 384
P FL CFLCK+ L RDIYMYRGD+ FCS ECR++Q+++DE K+
Sbjct: 95 PHFLDSCFLCKKPLGDNRDIYMYRGDTPFCSEECRQEQIERDEAKE 140
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ3_ARATH (FCS-Like Zinc finger 3 OS=Arabidopsis thaliana OX=3702 GN=FLZ3 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 2.312e-12 Identity = 26/46 (56.52%), Postives = 34/46 (73.91%), Query Frame = 1
Query: 247 PEFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKD 384
P FL C LC++ L DI+MYRGD AFCS+ECRE+Q++ DE K+
Sbjct: 14 PHFLESCSLCRKHLGLNSDIFMYRGDKAFCSNECREEQIESDEAKE 59
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ13_ARATH (FCS-Like Zinc finger 13 OS=Arabidopsis thaliana OX=3702 GN=FLZ13 PE=1 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 9.310e-12 Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 250 EFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKDNNKCGVASKKQVAATPSGSQVRSTKG 462
EFL C LCK++L +DIYMY+G+ FCS+ECR Q+ DER++ K V+ V ++P + R + G
Sbjct: 149 EFLSSCCLCKKKL-QGKDIYMYKGEMGFCSAECRSVQIMNDERQEQCKTQVSRNADVLSSPYAAGQRLSAG 218
BLAST of Vigun09g174100.1 vs. DB:Swiss
Match: FLZ8_ARATH (FCS-Like Zinc finger 8 OS=Arabidopsis thaliana OX=3702 GN=FLZ8 PE=1 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 6.006e-11 Identity = 35/89 (39.33%), Postives = 48/89 (53.93%), Query Frame = 1
Query: 124 GPDPWTKHPPPVGSNGLDQSRVWALVSPRNHRRHSEDSAHTP--EFLRVCFLCKRRLVPARDIYMYRGDSAFCSSECREKQMKQDERKD 384
GP+P T H + N + +S+ + + + DS ++P FL C CK+ L P DI+MYRGD AFCSSECR +M E D
Sbjct: 180 GPNPRTIH---IFDNCIVESQPGVVFFRSSDPVNESDSDYSPPDSFLSCCCNCKKSLGPRDDIFMYRGDRAFCSSECRSIEMMMSEEND 265 The following BLAST results are available for this feature:
BLAST of Vigun09g174100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g174100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g174100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g174100.1; organism=Vigna unguiculata; type=mRNA; length=1243bpback to top protein sequence of Vigun09g174100.1_Vu_IT97K-499-35_v1.1 >Vigun09g174100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g174100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g174100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=161bpback to top mRNA from alignment at Vu09:34520984..34522312- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g174100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g174100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g174100.1; organism=Vigna unguiculata; type=mRNA; length=1329bp; location=Sequence derived from: Vu09:34520984..34522312- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:34520984..34522312- >Vigun09g174100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g174100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g174100.1; organism=Vigna unguiculata; type=CDS; length=483bp; location=Sequence derived from: Vu09:34520984..34522312- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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