Vigun09g188800.1

Transcript Overview


Name	Vigun09g188800.1
Unique Name	Vigun09g188800.1_Vu_IT97K-499-35_v1.1
Type	mRNA
Organism	Vigna unguiculata (cowpea)
Sequence length	863

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vu09	supercontig	Vu09:36335078..36338287 +	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	2019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot	2019-10-17

Orthologs

Syntenic blocks


Syntentic block	Assembly	Species
vuvuL317	Vigna unguiculata L. Walp IT97K-499-35 genome v1.1	Vigna unguiculata
psvuL101	Pisum sativum Cameor genome v1a	Pisum sativum
psvuL494	Pisum sativum Cameor genome v1a	Pisum sativum
psvuL499	Pisum sativum Cameor genome v1a	Pisum sativum
psvuL811	Pisum sativum Cameor genome v1a	Pisum sativum
pvvuL801	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
ccvuL0930	Cajanus cajan Asha genome v1.0	Cajanus cajan
anvuL0321	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0373	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
anvuL0770	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
asvuL278	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
asvuL537	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
vuzwsR672	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
tifvuL317	Vicia faba cv. Tiffany genome v1.0	Vicia faba
vfhvuL294	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vfhvuL444	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
vrvvuL189	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vrvvuL398	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
vssvuL419	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
canvuL321	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvuL403	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
canvuL654	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
avjvuL036	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
avjvuL478	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
carvuL335		Cicer arietinum
carvuL418		Cicer arietinum
carvuL665		Cicer arietinum
ccavuL336	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
ccavuL610	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
vuvumR740	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vuvumR750	Vigna umbellata FF25 genome v1.0	Vigna umbellata
vuvvaR801	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
vstvuL173	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vstvuL247	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
vasvuL188	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
vasvuL265	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
pvfvuL707	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
vuvunR527	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Orthologs


Gene/Transcript	Assembly	Species
rna-XM_014644776.2	Vigna radiata cv. VC1973A genome v6.0	Vigna radiata
Vfaba.Hedin2.R1.2g198760.1	Vicia faba inbred line Hedin/2 genome v1.0	Vicia faba
Psat5g019760.1	Pisum sativum Cameor genome v1a	Pisum sativum
XM_058924728.1	Vicia villosa cv. AU Merit genome v1.0	Vicia villosa
PvulFLAVERTChr09.1000716	Phaseolus vulgaris cv. Flavert genome v1.0	Phaseolus vulgaris
Vigan.02G105400.01	Vigna angularis cv. Shumari genome v1.a1	Vigna angularis
Cc_v2.0_06760.1	Cajanus cajan cv. Asha genome v2.0	Cajanus cajan
jg55709.t1	Vicia sativa cv. Studenica genome v1.0	Vicia sativa
rna-KK1_009344	Cajanus cajan Asha genome v1.0	Cajanus cajan
Phvul.009G113300.1	Phaseolus vulgaris G19833 genome v2.1	Phaseolus vulgaris
Va04G060140.1	Vigna angularis cv. Jingnong6 genome v1.7.1	Vigna angularis
Psat05G0063700-T1	Pisum sativum cv. Zhongwan6 genome v1.0	Pisum sativum
LR48_mrnaVigan04g205000	Vigna angularis Jingnong 6 genome v1.1	Vigna angularis
Vigst.02G081200.01	Vigna stipulacea acc. JP252948 genome v2.a1	Vigna stipulacea
rna-TanjilR_12577	Lupinus angustifolius L. Tanjil genome v1.0	Lupinus angustifolius
Vfaba.Tiffany.R1.2g161560.1	Vicia faba cv. Tiffany genome v1.0	Vicia faba
rna-XM_004501027.3	Cicer arietinum CDC Frontier NCBI RefSeq v1	Cicer arietinum
Vum_02G00865.1	Vigna umbellata FF25 genome v1.0	Vigna umbellata

Gene/transcripts from the same species that appear to represent the same gene


Gene/Transcript	Assembly	Species
Vigun09g188800.1	Vigna unguiculata L. Walp IT97K-499-35 genome v1.2	Vigna unguiculata

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
Vigun09g188800	Vigun09g188800_Vu_IT97K-499-35_v1.1	Vigna unguiculata	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g188800.1_Vu_IT97K-499-35_v1.1	Vigun09g188800.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	polypeptide
Vigun09g188800.1	Vigun09g188800.1_Vu_IT97K-499-35_v1.1-protein	Vigna unguiculata	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g188800.1.v1.1.five_prime_UTR.1	Vigun09g188800.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g188800.1.v1.1.CDS.1	Vigun09g188800.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g188800.1.v1.1.CDS.2	Vigun09g188800.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS
Vigun09g188800.1.v1.1.CDS.3	Vigun09g188800.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1	Vigna unguiculata	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
Vigun09g188800.1.v1.1.three_prime_UTR.1	Vigun09g188800.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1	Vigna unguiculata	three_prime_UTR

Homology

[Close]

BLAST of Vigun09g188800.1 vs. DB:Swiss
Match: ERG28_ARATH (Ergosterol biosynthetic protein 28 OS=Arabidopsis thaliana OX=3702 GN=At1g10030 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 7.801e-74
Identity = 104/129 (80.62%), Postives = 117/129 (90.70%), Query Frame = 1

Query:    1 MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSKTTMTEIHGRTFGTWTLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFAGTSIIWMLLQWNSHSKVHLKHS 387
            MKALG+WL+ VG+LRLASVWFGFF+IWALRLAVFS+TTM+E+HGRTFG WTLLTCTLC++CAFNLENKPLYLATFLSFIYALGHFLTEYL Y TM I NL+TVG FAGTSI+WMLL+WNS  + H K S
Sbjct:    1 MKALGYWLMVVGSLRLASVWFGFFNIWALRLAVFSQTTMSEVHGRTFGVWTLLTCTLCFLCAFNLENKPLYLATFLSFIYALGHFLTEYLFYQTMTIANLSTVGFFAGTSIVWMLLEWNSLEQPHSKLS 129

[Close]

BLAST of Vigun09g188800.1 vs. DB:Swiss
Match: ERG28_PONAB (Probable ergosterol biosynthetic protein 28 OS=Pongo abelii OX=9601 GN=ERG28 PE=2 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.491e-10
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1

Query:    1 MKALGWWLIAVGTLRLASVWFGFFDIWAL--RLAVFSKTTMTEIHGRTFGTWTLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFA 321
            +  L  WL+ V  + + +    F D   L  +L       +  +  RTFG WTLL+  +  +CA ++ NK LY  T  +F+ ALGHFL+E  +Y T       T+G+ A
Sbjct:    5 LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of Vigun09g188800.1 vs. DB:Swiss
Match: ERG28_HUMAN (Probable ergosterol biosynthetic protein 28 OS=Homo sapiens OX=9606 GN=ERG28 PE=1 SV=1)

HSP 1 Score: 57.7658 bits (138), Expect = 2.491e-10
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1

Query:    1 MKALGWWLIAVGTLRLASVWFGFFDIWAL--RLAVFSKTTMTEIHGRTFGTWTLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFA 321
            +  L  WL+ V  + + +    F D   L  +L       +  +  RTFG WTLL+  +  +CA ++ NK LY  T  +F+ ALGHFL+E  +Y T       T+G+ A
Sbjct:    5 LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVYGTAA----PTIGVLA 109

[Close]

BLAST of Vigun09g188800.1 vs. DB:Swiss
Match: ERG28_MOUSE (Probable ergosterol biosynthetic protein 28 OS=Mus musculus OX=10090 GN=Erg28 PE=2 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 6.524e-10
Identity = 36/109 (33.03%), Postives = 55/109 (50.46%), Query Frame = 1

Query:    1 MKALGWWLIAVGTLRLASVWFGFFDIWAL--RLAVFSKTTMTEIHGRTFGTWTLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNLTTVGIFA 321
            +  L  WL+ V  + + +    F D   L  +L       +  +  RTFG WTLL+  +  +CA ++ NK LY  T  +F+ ALGHFL+E  ++ T       TVG+ A
Sbjct:    5 LNVLRSWLVMVSIIAMGNTLQSFRDHTFLYEKLYTGKPNLVNGLQARTFGIWTLLSSVIRCLCAIDIHNKTLYHITLWTFLLALGHFLSELFVFGTAA----PTVGVLA 109

[Close]

BLAST of Vigun09g188800.1 vs. DB:Swiss
Match: ERG28_YEAST (Ergosterol biosynthetic protein 28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=ERG28 PE=1 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 8.246e-8
Identity = 29/91 (31.87%), Postives = 49/91 (53.85%), Query Frame = 1

Query:  103 SKTTMTEIHGRTFGTWTLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEI-KNLTTVGIFAGTSIIWMLLQWNSHSKV 372
              T  T +  RTFGTWT ++C + +  A  L    ++   F+S++ AL HF +E LI+ T ++ K      + + TS++WM  Q   ++ V
Sbjct:   56 KPTETTHLSARTFGTWTFISCVIRFYGAMYLNEPHIFELVFMSYMVALFHFGSELLIFRTCKLGKGFMGPLVVSTTSLVWMYKQREYYTGV 146

The following BLAST results are available for this feature:

BLAST of Vigun09g188800.1 vs. DB:Swiss

BLAST of Vigun09g188800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
ERG28_ARATH	7.801e-74	80.62	Ergosterol biosynthetic protein 28 OS=Arabidopsis ...	[more]
ERG28_PONAB	2.491e-10	33.03	Probable ergosterol biosynthetic protein 28 OS=Pon...	[more]
ERG28_HUMAN	2.491e-10	33.03	Probable ergosterol biosynthetic protein 28 OS=Hom...	[more]
ERG28_MOUSE	6.524e-10	33.03	Probable ergosterol biosynthetic protein 28 OS=Mus...	[more]
ERG28_YEAST	8.246e-8	31.87	Ergosterol biosynthetic protein 28 OS=Saccharomyce...	[more]

InterPro

Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005352	Erg28	PFAM	PF03694	Erg28	coord: 3..101 e-value: 9.3E-26 score: 90.4

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at Vu09:36335078..36338287+
coding sequence from alignment at Vu09:36335078..36338287+

mRNA sequence

>Vigun09g188800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g188800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g188800.1; organism=Vigna unguiculata; type=mRNA; length=863bp
CACAACCACGTTTAGGTTGCAAGTTTTCGGGTTTGGGGTTGTTTGAGACG
GCATCGTTTTAGGGAAGTGAAGTTGAAGTGACAGAGGAGACTGTAGAGGC
GCAGTGAGAGTTCAGTGAAGAGGATGAAGGCGTTGGGATGGTGGCTGATA
GCGGTGGGCACGCTTCGATTGGCTTCGGTGTGGTTCGGTTTCTTCGACAT
TTGGGCTCTTCGACTCGCCGTCTTCTCCAAAACCACAATGACTGAAATTC
ATGGGCGCACATTTGGAACTTGGACATTGTTGACCTGCACCCTTTGCTAT
ATTTGCGCATTCAACCTTGAAAATAAGCCTCTCTACCTGGCTACTTTCTT
GTCATTCATCTATGCATTGGGACATTTCTTGACAGAATACCTAATTTATC
ACACAATGGAGATTAAGAATCTAACTACTGTTGGCATATTTGCAGGAACA
TCGATAATATGGATGCTATTGCAGTGGAATTCTCACTCGAAAGTCCACTT
GAAACACTCTTAACAAGCAAAAAGAGATGGGGACAAAAGTGTAATATTAC
AATTGGTGGTGTTGGACGGTTTAAAATAGAAGAAGAGACACAGCTTTAGA
TATCTCTTTTTTTAGAATTTATTTATCGACATTTCGTGTTGATACAAACA
AGTTAGGGCACCTATTGCGGTTTACAATGTCATGGATGCTGCGCTTACTG
TATTAACCTATTCTTAAAATGCAAATCATTATTGTTTTTGCACTAGTTGA
TTTTAAGAGATGCGAACCCCGGTGTTTAGAATTTTGAAGATGAATTATAC
TTTTCTATGTAATCTGTTTAATGACCTTATATTGCTGAAGGGATTGCCTC
TGTAATTAGAAGC

protein sequence of Vigun09g188800.1_Vu_IT97K-499-35_v1.1

>Vigun09g188800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g188800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g188800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=130bp
MKALGWWLIAVGTLRLASVWFGFFDIWALRLAVFSKTTMTEIHGRTFGTW
TLLTCTLCYICAFNLENKPLYLATFLSFIYALGHFLTEYLIYHTMEIKNL
TTVGIFAGTSIIWMLLQWNSHSKVHLKHS*

mRNA from alignment at Vu09:36335078..36338287+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>Vigun09g188800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g188800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g188800.1; organism=Vigna unguiculata; type=mRNA; length=3210bp; location=Sequence derived from: Vu09:36335078..36338287+ (Vigna unguiculata
CACAACCACGTTTAGGTTGCAAGTTTTCGGGTTTGGGGTTGTTTGAGACG
GCATCGTTTTAGGGAAGTGAAGTTGAAGTGACAGAGGAGACTGTAGAGGC
GCAGTGAGAGTTCAGTGAAGAGGATGAAGGCGTTGGGATGGTGGCTGATA
GCGGTGGGCACGCTTCGATTGGCTTCGGTGTGGTTCGGTTTCTTCGACAT
TTGGGCTCTTCGACTCGCCGTCTTCTCCAAAACCACAAGTAACTAACTCT
TCTCTTTCCTCATCTTACTCCAACACACAAAGTTGCTTTCGCATTTCGTT
ACACAGATTTAGGCCATTGATTCATTCACTCACATCAATCAGTTGTAGTT
GTAAGTAGATATTCACTCGTTTCAATGGTAGATACTGTCGGTTGAGTGTG
TAGTGAGTTCTGCTACTTCATTTGCGTACTCTCGCTGTTTCAGCGTCTGC
AACGGTGCTTGTGTCATTAGATTTAATGAGTTTTCTGAGGTAGACAAGAT
AATCGAAGCGTTAGATCCGATGTATGGCAATGAGATCTTCTAGATCCCAA
TGCTCCGGATATTGTTATTCATCTTTTTTGGCTTTCACAAGGAAATGTCG
TTGTTCGCCCTTTTGCGTTTCACAAGCTGTCATCATGTTTCTAGAATAGG
CTCTACATTGGTTGCATCTTCATTTCTGGAATTCCTTTTTTCCATGCTAA
CTATGTGTATGCATCACGCAACCTCTTCAGTTTTTTCTTTTTTGAAAAAT
ATGAACTCCTTTTTGGCAATGCAGGAGGCGTTATTGATTTTTATATTACT
AGTTTACTTGAAGTAATTGCCTGGGTTAACTGCTGTGCATTATGTATTTG
ATTTCTACTCTCAAAAAATTTGTTTAGTTTTCCAAGAAGGTAGCTGACAA
CTAGTTGGGGGCTGTGCAAGGTACACAAAAGAGTTTAAATTGAGGGAGAG
GTTCTTAATGAGAAGAGAGGAAGATGAAACACTCTGTTCTGAATTATAAT
TTTGATATTTAGTTTTAGCTGGTCACATTTAGTTCTTACAATTTTGTGAC
TATATTTTCATCTAATAATTAACTGGCTTGTACCAAAGGTATGATATATC
ATTAAAAATGGCTTATATTACTCTGTCTACTTTTTATTGGTTTAGATATT
GTATGTGCACTGTTGTCTTACTAATATATAAAATATGTTACATCCTTAGT
TTGATTAATTGTAAAATTTTGGGACGATAGACTTAGTTTGAATAATTGTA
AGACTATGAGAAGTAAATATGAATAATTTAAATTAGTAGACTCTGATTGC
ACAAAAAATATAAGGGGAAAATAAATTGGCCCTTATCCATCATCGTAAAG
CATGGTTTTAGAATTTTGGAGTGGATGAAGGAAGCAATTGACCCATGAAA
TGCCATTATCATCTTGTCCACTGCATCTCATTTTCTTGCACAACCTTTTT
GAGCCCTGGTTTTAACCGGCCAGAGTCAGCTTTTGAACCTTGGCAACGTG
GTTTTGAAATTCGTTCACATGATCTTCCCAAGGCTACACATATCCTTTCC
TGAATAAAAAAGTTGTCTCAATTATAGCATATGAATCTTTCGAATTTAAA
GAGTGTGTTTGGATGGCCATTTAGGATCCACGTTCTCTTACCACATTTAG
GATACTCGTGATGTAGAGTGTGTTTGGTATCGCGTTTGGAATCTTAAATT
CACATTATAAATGTAAAAAATGTAAACTACTCAAAGTAGCATTTGCTTAT
AGATCAAATTGGACTTGATCCCACATTAAACCAAACATCCACTAAGTATA
TATTGCTTCAAGTTGGATACATACCCAGCACAAAAAAAAGCTGATAAAAA
ATGCTGAGTCCTTTTATCTACATTAACCCTCTCCCATGGAACATGTTTAT
GACATGATCACCCAATTAGTAAAAATAACTAAGCCTGCATTTTTAAGTTT
AGTTGAGTTCTTACCGTAAGTAATGTCCTCGACTGTATGAATAGACTTTG
TTTTCACCTTTTTGAAATTATACGATAAAGTTTTGTTACACATCTGATAT
GAGAATAGATTTTACAACTTCTGACAACATTCATTACAGCTTTTTATATA
TATATATATATATATATATATTATAATTTTAAACATAATCATGTGAATTT
CAAAATTATCAGAATTGACCAATTTATTCGTTATTGTAGTGACTGAAATT
CATGGGCGCACATTTGGAACTTGGACATTGTTGACCTGCACCCTTTGCTA
TATTTGCGCATTCAACCTTGAAAATAAGCCTCTCTACCTGGCTACTTTCT
TGTCATTCATCTATGCATTGGGACATTTCTTGACAGAATACCTAATTTAT
CACACAATGGAGATTAAGAATCTAACTACTGTTGGCATATTTGCAGGTAT
GATACTTTTTTCTCGTGCCCTATCAAATTGAGACGGGTTAAATTATTTGT
CTTTATTGTGTTTTATCTGTCAATTATATTTCTACAATCACGCTTCCCGT
GTTTAATTATAGGTGTCGATTTTCAGGCTTTCTTTTTACATCTTTATATT
TAATATGCTTGACTATTTCAGTTGTCTTTTCGTTGTGAACATTATTTGCT
ACTCTCTTTCTGCTCTCCCCTAAGTCAAAATACTTAAAGTAAGGAAAAGA
ATCTTGTACGCCATTATATGTCCTCTAGCCTTTCGGTCCATTATTATTCT
GAAACGACCTTGGCTTGACTTATTATTCCTCCTGTGTTGGCATTATTTAC
TTTAGTGATGAAATACATTATAACATCTTAGTTTATTAACAGGAACATCG
ATAATATGGATGCTATTGCAGTGGAATTCTCACTCGAAAGTCCACTTGAA
ACACTCTTAACAAGCAAAAAGAGATGGGGACAAAAGTGTAATATTACAAT
TGGTGGTGTTGGACGGTTTAAAATAGAAGAAGAGACACAGCTTTAGATAT
CTCTTTTTTTAGAATTTATTTATCGACATTTCGTGTTGATACAAACAAGT
TAGGGCACCTATTGCGGTTTACAATGTCATGGATGCTGCGCTTACTGTAT
TAACCTATTCTTAAAATGCAAATCATTATTGTTTTTGCACTAGTTGATTT
TAAGAGATGCGAACCCCGGTGTTTAGAATTTTGAAGATGAATTATACTTT
TCTATGTAATCTGTTTAATGACCTTATATTGCTGAAGGGATTGCCTCTGT
AATTAGAAGC

Coding sequence (CDS) from alignment at Vu09:36335078..36338287+

>Vigun09g188800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g188800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g188800.1; organism=Vigna unguiculata; type=CDS; length=390bp; location=Sequence derived from: Vu09:36335078..36338287+ (Vigna unguiculata
ATGAAGGCGTTGGGATGGTGGCTGATAGCGGTGGGCACGCTTCGATTGGC
TTCGGTGTGGTTCGGTTTCTTCGACATTTGGGCTCTTCGACTCGCCGTCT
TCTCCAAAACCACAATGACTGAAATTCATGGGCGCACATTTGGAACTTGG
ACATTGTTGACCTGCACCCTTTGCTATATTTGCGCATTCAACCTTGAAAA
TAAGCCTCTCTACCTGGCTACTTTCTTGTCATTCATCTATGCATTGGGAC
ATTTCTTGACAGAATACCTAATTTATCACACAATGGAGATTAAGAATCTA
ACTACTGTTGGCATATTTGCAGGAACATCGATAATATGGATGCTATTGCA
GTGGAATTCTCACTCGAAAGTCCACTTGAAACACTCTTAA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR005352	Erg28

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Search form

Vigun09g188800.1