Vigun09g198600.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.597e-16 Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402 VP+G+V V VG E+ RFV+ E L H F LL+++ +E+G+EQ GVLRIPC V VFE IL+ Sbjct: 38 VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILE 99
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.741e-14 Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402 VP+G+V V VG E+ RFV+ E L H F LL + +E+G+EQ GVL+IPC V VFE I++ Sbjct: 50 VPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIME 111
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 7.310e-14 Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESILKIVE 411 PKGY+AV VG +L RFVIP YL +F LL +AEEEFG++ G L IPC VF+ I + Sbjct: 17 APKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.027e-12 Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESI 396 PKGY+AV VG ++ RFVIP Y+ +F LL +AEEEFG++ G L IPC VF+ I Sbjct: 17 APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU10_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 1.796e-12 Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKI 405 VPKG+ V VG SR+++P +L H F LLR AEEEFGF+ L IPC+ F S++ + Sbjct: 48 VPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISM 110
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.159e-12 Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQ-TGVLRIPCEVSVFESILKIVE 411 V KGY+AV VG ++ RFVIP YL +F LL +AEEEFG+ G L IPC VF+ I + Sbjct: 25 VEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 2.793e-12 Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIV 408 VPKG+ V VG SR+++P +L H F LL+ AEEEFGF+ L IPC+ VF+++ ++ Sbjct: 43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 5.247e-12 Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESILKIVERK 417 PKGY+AV VG + RFVIP +L F LL +AEEEFG++ G L IPC +F+ I + + Sbjct: 25 APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSAQ 92
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 7.740e-12 Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1 Query: 217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402 VP G+V V VG + RFV+ E L H F LL + +E+G+ Q GVL IPC V VFE +++ Sbjct: 48 VPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVE 109
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 63.1586 bits (152), Expect = 7.994e-12 Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 1 Query: 214 VVPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIV 408 VP G+V V VG E+ RFV+ E + H F LL + +E+G+ Q GVL IPC V VFE +++ + Sbjct: 53 TVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETL 117 The following BLAST results are available for this feature:
BLAST of Vigun09g198600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=mRNA; length=869bpback to top protein sequence of Vigun09g198600.1_Vu_IT97K-499-35_v1.1 >Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=176bpback to top mRNA from alignment at Vu09:37349027..37349895+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=mRNA; length=869bp; location=Sequence derived from: Vu09:37349027..37349895+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:37349027..37349895+ >Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=CDS; length=528bp; location=Sequence derived from: Vu09:37349027..37349895+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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