Vigun09g198600.1

Transcript Overview
NameVigun09g198600.1
Unique NameVigun09g198600.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length869
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:37349027..37349895 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL377Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL494Pisum sativum Cameor genome v1aPisum sativum
psvuL499Pisum sativum Cameor genome v1aPisum sativum
psvuL502Pisum sativum Cameor genome v1aPisum sativum
psvuL649Pisum sativum Cameor genome v1aPisum sativum
crvuL453Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL556Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL347Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0949Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0370Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0770Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0778Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL538Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL715Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR699Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL328Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL305Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL461Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL435Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL398Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL417Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL419Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL594Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR450Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR453Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL316Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL606Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL447Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR761Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR795Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR801Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR809Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL309Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Psat06G0093000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg35887.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014645269.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058924659.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Va04G061740.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_004498495.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vfaba.Hedin2.R1.3g199040.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Vfaba.Tiffany.R1.2g154000.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.02G093500.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-TanjilR_15715Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
jg55546.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Cr_09716.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
LR48_mrnaVigan04g207600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigst.02G071800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_02G00767.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_11009Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Psat5g024720.1Pisum sativum Cameor genome v1aPisum sativum
Vfaba.Tiffany.R1.3g163960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-TanjilR_32954Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
evm.model.Chr08.2048Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Hedin2.R1.2g190320.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
evm.model.Chr09.1715Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
XM_058868777.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.009G103800.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cc_v2.0_06853.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-KK1_009369Cajanus cajan Asha genome v1.0Cajanus cajan
Cc_v2.0_11264.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
PvulFLAVERTChr09.1000667Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g198600.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g198600Vigun09g198600_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g198600.1Vigun09g198600.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g198600.1_Vu_IT97K-499-35_v1.1Vigun09g198600.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g198600.1.v1.1.five_prime_UTR.1Vigun09g198600.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g198600.1.v1.1.CDS.1Vigun09g198600.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g198600.1.v1.1.three_prime_UTR.1Vigun09g198600.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.597e-16
Identity = 34/62 (54.84%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402
            VP+G+V V VG E+ RFV+  E L H  F  LL+++ +E+G+EQ GVLRIPC V VFE IL+
Sbjct:   38 VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERILE 99          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU72_ARATH (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.741e-14
Identity = 32/62 (51.61%), Postives = 43/62 (69.35%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402
            VP+G+V V VG E+ RFV+  E L H  F  LL  + +E+G+EQ GVL+IPC V VFE I++
Sbjct:   50 VPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCHVLVFERIME 111          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 7.310e-14
Identity = 33/66 (50.00%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESILKIVE 411
             PKGY+AV VG +L RFVIP  YL   +F  LL +AEEEFG++   G L IPC   VF+ I   + 
Sbjct:   17 APKGYLAVYVGEKLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQCITSCLN 82          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.027e-12
Identity = 31/61 (50.82%), Postives = 40/61 (65.57%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESI 396
             PKGY+AV VG ++ RFVIP  Y+   +F  LL +AEEEFG++   G L IPC   VF+ I
Sbjct:   17 APKGYLAVYVGEKMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU10_ARATH (Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabidopsis thaliana OX=3702 GN=SAUR10 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 1.796e-12
Identity = 29/63 (46.03%), Postives = 39/63 (61.90%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKI 405
            VPKG+  V VG   SR+++P  +L H  F  LLR AEEEFGF+    L IPC+   F S++ +
Sbjct:   48 VPKGHFPVYVGPNRSRYIVPISWLHHSEFQTLLRLAEEEFGFDHDMGLTIPCDEVFFRSLISM 110          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.159e-12
Identity = 32/66 (48.48%), Postives = 40/66 (60.61%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQ-TGVLRIPCEVSVFESILKIVE 411
            V KGY+AV VG ++ RFVIP  YL   +F  LL +AEEEFG+    G L IPC   VF+ I   + 
Sbjct:   25 VEKGYLAVYVGEKMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHITSFLN 90          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU50_ARATH (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.793e-12
Identity = 28/64 (43.75%), Postives = 41/64 (64.06%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIV 408
            VPKG+  V VG   SR+++P  +L H  F  LL+ AEEEFGF+    L IPC+  VF+++  ++
Sbjct:   43 VPKGHFPVYVGENRSRYIVPISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata OX=3916 GN=ARG7 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 5.247e-12
Identity = 30/68 (44.12%), Postives = 40/68 (58.82%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQT-GVLRIPCEVSVFESILKIVERK 417
             PKGY+AV VG  + RFVIP  +L    F  LL +AEEEFG++   G L IPC   +F+ I   +  +
Sbjct:   25 APKGYLAVYVGENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSAQ 92          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU40_ARATH (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.740e-12
Identity = 29/62 (46.77%), Postives = 39/62 (62.90%), Query Frame = 1
Query:  217 VPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILK 402
            VP G+V V VG +  RFV+  E L H  F  LL  + +E+G+ Q GVL IPC V VFE +++
Sbjct:   48 VPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKGVLHIPCNVFVFEQVVE 109          
BLAST of Vigun09g198600.1 vs. DB:Swiss
Match: SAU41_ARATH (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 7.994e-12
Identity = 29/65 (44.62%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  214 VVPKGYVAVCVGVELSRFVIPTEYLGHKAFHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIV 408
             VP G+V V VG E+ RFV+  E + H  F  LL  + +E+G+ Q GVL IPC V VFE +++ +
Sbjct:   53 TVPAGHVPVYVGEEMERFVVSAELMNHPIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETL 117          
The following BLAST results are available for this feature:
BLAST of Vigun09g198600.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
SAU71_ARATH2.597e-1654.84Auxin-responsive protein SAUR71 OS=Arabidopsis tha... [more]
SAU72_ARATH1.741e-1451.61Auxin-responsive protein SAUR72 OS=Arabidopsis tha... [more]
AX15A_SOYBN7.310e-1450.00Auxin-induced protein 15A OS=Glycine max OX=3847 P... [more]
AXX15_SOYBN1.027e-1250.82Auxin-induced protein X15 OS=Glycine max OX=3847 P... [more]
SAU10_ARATH1.796e-1246.03Protein SMALL AUXIN UP-REGULATED RNA 10 OS=Arabido... [more]
AX6B_SOYBN2.159e-1248.48Auxin-induced protein 6B OS=Glycine max OX=3847 PE... [more]
SAU50_ARATH2.793e-1243.75Auxin-responsive protein SAUR50 OS=Arabidopsis tha... [more]
ARG7_VIGRR5.247e-1244.12Indole-3-acetic acid-induced protein ARG7 OS=Vigna... [more]
SAU40_ARATH7.740e-1246.77Auxin-responsive protein SAUR40 OS=Arabidopsis tha... [more]
SAU41_ARATH7.994e-1244.62Auxin-responsive protein SAUR41 OS=Arabidopsis tha... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 23..135
e-value: 6.1E-27
score: 93.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..49

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=mRNA; length=869bp
AACCTATTTCAACCAGGTTCAGTTCTATTGTCCCATAATAACCCTAACCC
AACCCTTCTCATAGGGTTTCACCAACATGGATCCTACTAAGAAACCCAAC
AAGATCAGGGACATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAG
GGTTGCAAACTCTTCAAGAACAAGCAGcaacagcaacagcaacaacaaca
acaacaacaacaGTAACACCAGCAGAAGCATAAAATTTCTGAAAAGAACA
CTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAA
GGGCTACGTTGCTGTTTGTGTTGGCGTGGAGCTTAGCAGGTTCGTTATAC
CAACCGAGTATTTGGGTCACAAAGCCTTTCACATGTTGCTCAGAGAAGCT
GAGGAAGAGTTCGGGTTTGAACAAACCGGGGTTCTCAGAATCCCTTGTGA
AGTTTCCGTGTTCGAGAGTATCTTGAAGATAGTGGAGCGAAAGGACAGGT
TTTTCACTCAGAAATGCAGGTTTAGCATTGAGAAAATGATGGGTTACTGT
TCCTCCAACAACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAG
ATAGTTTAGGATTTTCACAATTTTTATACAttttttttttgttttctctt
tcttttgttctttGTGGAAGCCGAGAGGGTTCCGAGAAATTCATCAGTTA
CAACTGAGAGAAGAGAACCCTCTAAGCAAAGAATGCAACTTTTCATTGTC
CAAATCATGTATGTCAGGCAATTTTGGACTGGTGATGATAAGACAAAAAG
CTTTCACAGATGACAAATCTGAGTACTACTTACTGATTTTTTTATTCTGG
AATAGAAAGTTTTGTTATT
back to top

protein sequence of Vigun09g198600.1_Vu_IT97K-499-35_v1.1

>Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=176bp
MDPTKKPNKIRDIVRLQQILKKWRRVANSSRTSSNSNSNNNNNNNSNTSR
SIKFLKRTLSLSEREGGGSSSVVPKGYVAVCVGVELSRFVIPTEYLGHKA
FHMLLREAEEEFGFEQTGVLRIPCEVSVFESILKIVERKDRFFTQKCRFS
IEKMMGYCSSNNLAYSHQPQSPMCR*
back to top

mRNA from alignment at Vu09:37349027..37349895+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=mRNA; length=869bp; location=Sequence derived from: Vu09:37349027..37349895+ (Vigna unguiculata
AACCTATTTCAACCAGGTTCAGTTCTATTGTCCCATAATAACCCTAACCC AACCCTTCTCATAGGGTTTCACCAACATGGATCCTACTAAGAAACCCAAC AAGATCAGGGACATAGTGAGGCTTCAACAGATTCTTAAGAAATGGAGAAG GGTTGCAAACTCTTCAAGAACAAGCAGCAACAGCAACAGCAACAACAACA ACAACAACAACAGTAACACCAGCAGAAGCATAAAATTTCTGAAAAGAACA CTTTCTCTGTCTGAACGTGAGGGAGGAGGATCGAGCAGTGTTGTTCCCAA GGGCTACGTTGCTGTTTGTGTTGGCGTGGAGCTTAGCAGGTTCGTTATAC CAACCGAGTATTTGGGTCACAAAGCCTTTCACATGTTGCTCAGAGAAGCT GAGGAAGAGTTCGGGTTTGAACAAACCGGGGTTCTCAGAATCCCTTGTGA AGTTTCCGTGTTCGAGAGTATCTTGAAGATAGTGGAGCGAAAGGACAGGT TTTTCACTCAGAAATGCAGGTTTAGCATTGAGAAAATGATGGGTTACTGT TCCTCCAACAACCTTGCTTATTCTCATCAACCTCAAAGTCCAATGTGCAG ATAGTTTAGGATTTTCACAATTTTTATACATTTTTTTTTTGTTTTCTCTT TCTTTTGTTCTTTGTGGAAGCCGAGAGGGTTCCGAGAAATTCATCAGTTA CAACTGAGAGAAGAGAACCCTCTAAGCAAAGAATGCAACTTTTCATTGTC CAAATCATGTATGTCAGGCAATTTTGGACTGGTGATGATAAGACAAAAAG CTTTCACAGATGACAAATCTGAGTACTACTTACTGATTTTTTTATTCTGG AATAGAAAGTTTTGTTATT
back to top

Coding sequence (CDS) from alignment at Vu09:37349027..37349895+

>Vigun09g198600.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g198600.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g198600.1; organism=Vigna unguiculata; type=CDS; length=528bp; location=Sequence derived from: Vu09:37349027..37349895+ (Vigna unguiculata
ATGGATCCTACTAAGAAACCCAACAAGATCAGGGACATAGTGAGGCTTCA
ACAGATTCTTAAGAAATGGAGAAGGGTTGCAAACTCTTCAAGAACAAGCA
GCAACAGCAACAGCAACAACAACAACAACAACAACAGTAACACCAGCAGA
AGCATAAAATTTCTGAAAAGAACACTTTCTCTGTCTGAACGTGAGGGAGG
AGGATCGAGCAGTGTTGTTCCCAAGGGCTACGTTGCTGTTTGTGTTGGCG
TGGAGCTTAGCAGGTTCGTTATACCAACCGAGTATTTGGGTCACAAAGCC
TTTCACATGTTGCTCAGAGAAGCTGAGGAAGAGTTCGGGTTTGAACAAAC
CGGGGTTCTCAGAATCCCTTGTGAAGTTTCCGTGTTCGAGAGTATCTTGA
AGATAGTGGAGCGAAAGGACAGGTTTTTCACTCAGAAATGCAGGTTTAGC
ATTGAGAAAATGATGGGTTACTGTTCCTCCAACAACCTTGCTTATTCTCA
TCAACCTCAAAGTCCAATGTGCAGATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR003676SAUR_fam
Vocabulary: Biological Process
TermDefinition
GO:0009733response to auxin