Vigun09g200800.1

Transcript Overview
NameVigun09g200800.1
Unique NameVigun09g200800.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length544
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:37507175..37507718 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g200800Vigun09g200800_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g200800.1Vigun09g200800.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g200800.1_Vu_IT97K-499-35_v1.1Vigun09g200800.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g200800.1.v1.1.five_prime_UTR.1Vigun09g200800.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g200800.1.v1.1.CDS.1Vigun09g200800.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g200800.1.v1.1.three_prime_UTR.1Vigun09g200800.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Vigun09g200800.1 vs.
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008480Protein of unknown function DUF761, plantPFAMPF05553DUF761coord: 77..100
e-value: 2.5E-7
score: 30.1

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g200800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g200800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g200800.1; organism=Vigna unguiculata; type=mRNA; length=544bp
GTAGCTTCTACGTGAGCAAATGAAGAGACAGAAATCTACACCACTCATTA
GACAAATACACAGGTCTATAAAGAAACTGAAGACTCTGATGCACTCTTGG
CGAGTGCATTCCACTGTATCCTCAAGTTTAAAACAAAGATGGTGCAGTTT
GTTCCACAAACGAATGAACCAGCAAAGGTTCCTTGTGGATGAAGAAATCA
CTGAGGATTATATGCTTCGATGTAGAACAACAATGGCGTGTGCTTCAGAA
GATGATATTGATAAAAGGGCTGAGATTTTTATCGCAAAATTCCGGCGACA
ACTAAGCTTGGAGAGTATAGCTTATTCTGAAACAAAGTATATTATATAAG
AGATAGTTTTTATGTGACTAACTATAATAAAGTGATTCAATGGttatttt
ttcaagttttttttttttttttATGTGTGAAATTTGTGTGTTGGGGTTTT
TATTAAATAAGTCGACATTGTTTGAAGTACATGTTGTATTGTATTACGTG
TTTTTTTTTTTCCTTTTCTGGTCGATTATGGACTTGTAGGAACT
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protein sequence of Vigun09g200800.1_Vu_IT97K-499-35_v1.1

>Vigun09g200800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g200800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g200800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=110bp
MKRQKSTPLIRQIHRSIKKLKTLMHSWRVHSTVSSSLKQRWCSLFHKRMN
QQRFLVDEEITEDYMLRCRTTMACASEDDIDKRAEIFIAKFRRQLSLESI
AYSETKYII*
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mRNA from alignment at Vu09:37507175..37507718+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g200800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g200800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g200800.1; organism=Vigna unguiculata; type=mRNA; length=544bp; location=Sequence derived from: Vu09:37507175..37507718+ (Vigna unguiculata
GTAGCTTCTACGTGAGCAAATGAAGAGACAGAAATCTACACCACTCATTA
GACAAATACACAGGTCTATAAAGAAACTGAAGACTCTGATGCACTCTTGG
CGAGTGCATTCCACTGTATCCTCAAGTTTAAAACAAAGATGGTGCAGTTT
GTTCCACAAACGAATGAACCAGCAAAGGTTCCTTGTGGATGAAGAAATCA
CTGAGGATTATATGCTTCGATGTAGAACAACAATGGCGTGTGCTTCAGAA
GATGATATTGATAAAAGGGCTGAGATTTTTATCGCAAAATTCCGGCGACA
ACTAAGCTTGGAGAGTATAGCTTATTCTGAAACAAAGTATATTATATAAG
AGATAGTTTTTATGTGACTAACTATAATAAAGTGATTCAATGGTTATTTT
TTCAAGTTTTTTTTTTTTTTTTATGTGTGAAATTTGTGTGTTGGGGTTTT
TATTAAATAAGTCGACATTGTTTGAAGTACATGTTGTATTGTATTACGTG
TTTTTTTTTTTCCTTTTCTGGTCGATTATGGACTTGTAGGAACT
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Coding sequence (CDS) from alignment at Vu09:37507175..37507718+

>Vigun09g200800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g200800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g200800.1; organism=Vigna unguiculata; type=CDS; length=330bp; location=Sequence derived from: Vu09:37507175..37507718+ (Vigna unguiculata
ATGAAGAGACAGAAATCTACACCACTCATTAGACAAATACACAGGTCTAT
AAAGAAACTGAAGACTCTGATGCACTCTTGGCGAGTGCATTCCACTGTAT
CCTCAAGTTTAAAACAAAGATGGTGCAGTTTGTTCCACAAACGAATGAAC
CAGCAAAGGTTCCTTGTGGATGAAGAAATCACTGAGGATTATATGCTTCG
ATGTAGAACAACAATGGCGTGTGCTTCAGAAGATGATATTGATAAAAGGG
CTGAGATTTTTATCGCAAAATTCCGGCGACAACTAAGCTTGGAGAGTATA
GCTTATTCTGAAACAAAGTATATTATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR008480DUF761_pln