Vigun09g211200.1

Transcript Overview
NameVigun09g211200.1
Unique NameVigun09g211200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length5778
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:38541570..38550659 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL377Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL109Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL494Pisum sativum Cameor genome v1aPisum sativum
psvuL644Pisum sativum Cameor genome v1aPisum sativum
pvvuL068Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL857Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0613Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL657Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0934Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0062Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0065Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0249Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0370Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL085Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL538Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL719Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR671Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR680Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR699Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL467Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL568Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL442Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL398Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL419Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL594Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR450Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL315Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL262Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL606Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
ccavuL171Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL447Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR707Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR761Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR783Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR760Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR774Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL084Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL294Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL097Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL309Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL066Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL344Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR521Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vum_02G00645.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0106700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
LR48_mrnaVigan04g220400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va04G063640.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
jg55354.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Phvul.009G091900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Cr_02976.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Ca_01745Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_06977.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-TanjilR_12489Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
XM_058925049.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-TanjilR_07868Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr09.1000590Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Ca_14762.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
rna-XM_014645558.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_012716172.2Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigst.02G060200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-KK1_009404Cajanus cajan Asha genome v1.0Cajanus cajan
rna-TanjilR_30715Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vfaba.Hedin2.R1.2g183000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat5g029560.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.02G079200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
evm.model.Chr09.1601.1.62113178Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vfaba.Tiffany.R1.2g147600.1Vicia faba cv. Tiffany genome v1.0Vicia faba

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g211200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g211200Vigun09g211200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g211200.1Vigun09g211200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g211200.1_Vu_IT97K-499-35_v1.1Vigun09g211200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g211200.1.v1.1.five_prime_UTR.1Vigun09g211200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g211200.1.v1.1.CDS.1Vigun09g211200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.2Vigun09g211200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.3Vigun09g211200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.4Vigun09g211200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.5Vigun09g211200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.6Vigun09g211200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.7Vigun09g211200.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.8Vigun09g211200.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.9Vigun09g211200.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g211200.1.v1.1.CDS.10Vigun09g211200.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g211200.1.v1.1.three_prime_UTR.1Vigun09g211200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC16_ARATH (MATH domain and coiled-coil domain-containing protein At3g58210 OS=Arabidopsis thaliana OX=3702 GN=At3g58210 PE=4 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.830e-16
Identity = 54/166 (32.53%), Postives = 80/166 (48.19%), Query Frame = 1 
Query: 1192 GKFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPLDAGK 1689
             KFTW I+NF+  +            + S +F IG    RL+VYP G ++   HLS+FLEV D R+    WS    + L++VNQ  +  S   E+   +++    WG    + LT L  +D GFLV D +   AEV +L+    + D  E   E +    P+   K
Sbjct:    7 NKFTWVIQNFSSSQ---------SRVVPSNQFVIGGCKWRLLVYPEGFNKSGDHLSLFLEVADPRSLPPGWSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVNDELKIVAEVNVLEVIGKL-DVPEESEEETQVTQPMKKVK 162

HSP 2 Score: 62.3882 bits (150), Expect = 1.341e-8
Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 1 
Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILIL 576
            W + NF   ++R + S  F +GG   RLL+YP+G +++   ++S++L++ DPR      W   A Y L IVN   D  +   ++   F+ K    G     P + +     G+L N D + I A++ +L
Sbjct:   11 WVIQNFSSSQSRVVPSNQFVIGGCKWRLLVYPEGFNKS-GDHLSLFLEVADPRSLPPG-WSRHARYLLTIVNQHSDKISKRNEATKWFNQKIPGWGLSAMIPLTKLHAKDGGFLVN-DELKIVAEVNVL 136
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: UBP12_ARATH (Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana OX=3702 GN=UBP12 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.923e-16
Identity = 45/128 (35.16%), Postives = 76/128 (59.38%), Query Frame = 1 
Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILI 573
            WT+ NF R   R  +S  F VGGY  R+LI+PKG++     ++S+YL + D   +    W  +A + LA+VN      T+ +++ H+F++++   G+  F P S ++DP  GYL N D+VL+ A++ +
Sbjct:   59 WTIPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVSD-AASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVN-DTVLVEAEVAV 181

HSP 2 Score: 87.8113 bits (216), Expect = 7.147e-16
Identity = 50/139 (35.97%), Postives = 79/139 (56.83%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            KFTW I NF+R       RK       S  F +G    R++++P+G +    HLS++L+V+D+ +    WS +    L+VVNQ     +V KE+Q++++    DWG+  F+ L+ L+D   G+LV DTV+  AEV + K
Sbjct:   56 KFTWTIPNFSRQN----TRKHY-----SDVFVVGGYKWRILIFPKGNNV--DHLSMYLDVSDAASLPYGWSRYAQFSLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVAVRK 183
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: UBP13_ARATH (Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabidopsis thaliana OX=3702 GN=UBP13 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.597e-16
Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            KFTW I  FTRL      RK       S  F +G    R++++P+G +    HLS++L+V D+ N    WS +    L+VVNQ     S+ KE+Q++++    DWG+  F+ L+ L++   G+LV DTV+  AEV + K
Sbjct:   55 KFTWTIPMFTRLN----TRKHY-----SDVFVVGGYKWRILIFPKGNNV--DHLSMYLDVADAANLPYGWSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVNDTVLIEAEVAVRK 182

HSP 2 Score: 87.4261 bits (215), Expect = 8.180e-16
Identity = 43/128 (33.59%), Postives = 77/128 (60.16%), Query Frame = 1 
Query:  190 WTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHRFSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILI 573
            WT+  F R+  R  +S  F VGGY  R+LI+PKG++     ++S+YL + D        W  ++ + LA+VN  ++  +I +++ H+F++++   G+  F P S +++P  GYL N D+VLI A++ +
Sbjct:   58 WTIPMFTRLNTRKHYSDVFVVGGYKWRILIFPKGNNV---DHLSMYLDVADAANLPYG-WSRYSQFSLAVVNQVNNRYSIRKETQHQFNARESDWGFTSFMPLSELYEPTRGYLVN-DTVLIEAEVAV 180
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC23_ARATH (MATH domain and coiled-coil domain-containing protein At3g58340 OS=Arabidopsis thaliana OX=3702 GN=At3g58340 PE=4 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 5.205e-13
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            KF W I+NF+ L         +  C  S    IG+   RL+ +P+G      +LS++LEV D ++  S W  +V  R  +VNQ  ++ SV +E+Q  + + A  WG+   + LT L  +D GFLV   V+  AEV  L+
Sbjct:    8 KFCWEIKNFSSLN--------SERC-HSVPVVIGDCKWRLVAFPKGYKAD--YLSLYLEVADFKSLPSGWRRYVKFRACIVNQLSQELSVQQETQRWFDQNAPGWGFENMLLLTELNAKDGGFLVNGQVMIVAEVEFLE 135
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC29_ARATH (MATH domain and coiled-coil domain-containing protein At3g58410 OS=Arabidopsis thaliana OX=3702 GN=At3g58410 PE=4 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 4.722e-11
Identity = 47/138 (34.06%), Postives = 72/138 (52.17%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIK--SRRFQIGNRDCRLIVYPRGQSQPPC-HLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEV 1599
            KF W I+NF+ L+           C K  S  FQIG+   RL +YP+G +   C +LS+FLEV D ++  S W  +V  RL +V Q     ++ +++   + +    WG+   + LT L D+  GFLV   ++  AEV
Sbjct:    8 KFAWVIKNFSSLQ-----------CKKFYSVPFQIGDCKWRLSIYPKGNN---CDYLSLFLEVADFKSLPSGWRRYVKLRLYIVKQL---STLIRKTHRWFDQEMWGWGFLYMLPLTKLHDEKEGFLVNGELMIVAEV 128
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC19_ARATH (MATH domain and coiled-coil domain-containing protein At3g58250 OS=Arabidopsis thaliana OX=3702 GN=At3g58250 PE=4 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.949e-11
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIM 1626
            KF+W I+NF+ L+            I S +F I     RL+ +P+G      HLS++L+V +S +    W        ++VN   E  S  KE+ + + +   DWG+   V L  L  +DSGFLV+  +    E+ +L+   ++
Sbjct:   10 KFSWVIKNFSSLQ---------SEKIYSDQFVIDGCRWRLLAFPKGNDTKSDHLSLYLDVAESESLPCGWRRHAQFSFTIVNHIPEKCSQRKETIHWFCEKVSDWGFTNLVPLIELKAEDSGFLVKGELKIVVEIEVLEVIGLL 144
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC15_ARATH (MATH domain and coiled-coil domain-containing protein At3g58200 OS=Arabidopsis thaliana OX=3702 GN=At3g58200 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.291e-10
Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFL 1566
            KF W I+NF+ L     +R  + +      F +G+   RL+ YP+G     C  S+FL VTD +    DW      RL+VVNQ  E+ S+ KE+Q  + +    WG+   + LT L  ++ GFL
Sbjct:    8 KFRWVIKNFSSLGS---ERVFSDI------FVVGSCKWRLMAYPKGVRDNRC-FSLFLVVTDFKTLPCDWKRHTRLRLNVVNQLSEELSILKETQMWFDQKTPAWGFLAMLPLTELKAENGGFL 121
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC25_ARATH (MATH domain and coiled-coil domain-containing protein At3g58360 OS=Arabidopsis thaliana OX=3702 GN=At3g58360 PE=4 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 6.996e-10
Identity = 46/139 (33.09%), Postives = 67/139 (48.20%), Query Frame = 1 
Query: 1195 KFTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPCHLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            K TW IENF+ L    KK       I S  F +G    R +VYP+G +    +L ++LEV D  + S +W     + L+VVNQ    +S   E Q  +   +  WG      L  +  +DSGFLV   +   AE+ +L+
Sbjct:    8 KITWAIENFSSLHS--KK-------IYSDPFIVGGCKWRFLVYPKGNNVD--YLFLYLEVADYESLSPEWRRHARYLLNVVNQNSVKRSKQNEEQKWFDVQSPRWGRLSMFPLNEINAKDSGFLVNGELKIVAEIEVLE 135
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: MCC20_ARATH (MATH domain and coiled-coil domain-containing protein At3g58260 OS=Arabidopsis thaliana OX=3702 GN=At3g58260 PE=1 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 7.370e-10
Identity = 44/140 (31.43%), Postives = 69/140 (49.29%), Query Frame = 1 
Query: 1198 FTWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPR-GQSQPPCHLSVFLEVTDS-RNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILK 1611
            FTW I+N + L+         GL ++S+ F +G    RLI YP    +     LSV+L V D   +  S W       L++VNQ  E  S  +E+Q  + + A  WG+   + L  + D+  GFLV D V+ +  V +++
Sbjct:    9 FTWVIKNLSTLQ---------GLEVRSKIFVVGGCKWRLIAYPEVNDADGYLSLSVYLGVPDCCESLPSGWKRHAKFSLTIVNQLSEGLSQVQETQAWFDENAPGWGFPPMLNLKDVSDKYGGFLVNDEVMVAVAVDVIE 139
[Close]
BLAST of Vigun09g211200.1 vs. DB:Swiss
Match: FNKC_DICDI (Probable inactive serine/threonine-protein kinase fnkC OS=Dictyostelium discoideum OX=44689 GN=fnkC PE=3 SV=1)

HSP 1 Score: 65.0846 bits (157), Expect = 6.419e-9
Identity = 57/251 (22.71%), Postives = 116/251 (46.22%), Query Frame = 1 
Query: 1354 LSVFLEVTDSRNTSSDWSCF----VSHRLSVVNQKMEDKSVTKESQNRYSKAAKDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDSELSSSGSPLDAGKRSSFTWKVENFLSFKEIMETRK---IFSKFFQAGGCELRIGVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPTKTV--WKESSICTKTWNNSVLQFMKVSDMLEVDAGFLVRDTVVFVCEILDCCP 2079
            LS+F+   D  N  + ++ F    +S++L+++NQK  ++S+ K S + +S    + G+  F+ L SL + ++GFLV +T+    +                 S L ++    + G   +F++ V         M ++K     S  F + G +  I +Y        Y+        + ++N  V + + +++Q  P +++  W +    +K+ +    +F+ VS +++ D GFLV DT++    IL   P
Sbjct: 1071 LSIFISNCDLLN--NPFTIFLEKSISYKLTLINQKNPNESIQKSSSHTFSIKEFNHGYGSFIGLFSLLNPNNGFLVNNTIKVRID-------------AAPTSPLVNTYDKYNIGLNQAFSYSVP--------MMSKKSEPFISPIFMSCGRKWIIKIYPMGQPSSNYMSVFLEYRDEGEEN--VHFSLELISQLYPEQSIKYWVQYRFNSKSNSFGYPKFIGVSTLMDPDMGFLVNDTIILNVSILQLKP 1296
The following BLAST results are available for this feature:
BLAST of Vigun09g211200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
MCC16_ARATH1.830e-1632.53MATH domain and coiled-coil domain-containing prot... [more]
UBP12_ARATH1.923e-1635.16Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabid... [more]
UBP13_ARATH3.597e-1636.69Ubiquitin carboxyl-terminal hydrolase 13 OS=Arabid... [more]
MCC23_ARATH5.205e-1334.53MATH domain and coiled-coil domain-containing prot... [more]
MCC29_ARATH4.722e-1134.06MATH domain and coiled-coil domain-containing prot... [more]
MCC19_ARATH7.949e-1129.17MATH domain and coiled-coil domain-containing prot... [more]
MCC15_ARATH3.291e-1034.68MATH domain and coiled-coil domain-containing prot... [more]
MCC25_ARATH6.996e-1033.09MATH domain and coiled-coil domain-containing prot... [more]
MCC20_ARATH7.370e-1031.43MATH domain and coiled-coil domain-containing prot... [more]
FNKC_DICDI6.419e-922.71Probable inactive serine/threonine-protein kinase ... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1515..1542
NoneNo IPR availableCOILSCoilCoilcoord: 1398..1507
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 858..885
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
IPR002083MATH/TRAF domainSMARTSM00061math_3coord: 569..669
e-value: 0.12
score: 13.8
coord: 402..514
e-value: 0.019
score: 22.4
coord: 234..347
e-value: 0.13
score: 13.5
coord: 61..169
e-value: 8.1E-8
score: 42.0
IPR002083MATH/TRAF domainPFAMPF00917MATHcoord: 68..191
e-value: 1.1E-8
score: 35.3
coord: 429..535
e-value: 4.5E-11
score: 42.9
coord: 577..684
e-value: 0.0024
score: 18.0
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 229..366
score: 18.652
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 564..688
score: 13.794
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 59..189
score: 25.454
IPR002083MATH/TRAF domainPROSITEPS50144MATHcoord: 397..533
score: 29.059
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 566..688
e-value: 4.20125E-15
score: 71.2562
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 63..189
e-value: 3.86609E-21
score: 88.5902
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 230..362
e-value: 3.62829E-17
score: 77.4194
IPR002083MATH/TRAF domainCDDcd00121MATHcoord: 398..533
e-value: 6.58785E-29
score: 110.932
IPR008974TRAF-likeGENE3D2.60.210.10coord: 228..373
e-value: 1.3E-23
score: 85.5
IPR008974TRAF-likeGENE3D2.60.210.10coord: 57..209
e-value: 8.5E-31
score: 108.9
IPR008974TRAF-likeGENE3D2.60.210.10coord: 388..542
e-value: 4.2E-36
score: 126.1
coord: 557..690
e-value: 1.0E-17
score: 66.4
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 398..539
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 227..372
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 58..197
IPR008974TRAF-likeSUPERFAMILY49599TRAF domain-likecoord: 565..689

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g211200.1; organism=Vigna unguiculata; type=mRNA; length=5778bp
TTGTACTAATCCGACGGATAAAAAGGGTTAGCATGAAGAAAGAAACCTAG
TTTTGCTTGCACTGTAACCTACCCTATGAAAACAGAATGAAGAAACAAAG
GCGCAAGATTATTATCATACGCCAGGAGGGATGAGGCGATAAAAGAAAGA
GGCGCACTGTGCTATCTTGCGCCCACGTTGTCCAAACCTGTTTGTGTGTG
CTTTCATTCTCTCGCTTGCACCACATCTCTCTGCCTCCTCTCTCTGCGTC
CAAGATTTCAATACTCGTGAGAAAACTACTaacacgaacaagaagaacag
gaacgaacagaaggaaaacgaaacaatgaagcaagCTTCGGCCGAGGCAG
TTCCTTCGCTATCTTCCACGCCATCGTTCACGGAGGCGACGACATCGTCG
TCATCATCCGCTGCTGCGGCGGAGGACCTGGCGGTAGGGTCACGGGACGG
TGGCGGCGGCGCTCAGGAGACGGTGGCGGTGGATCGGCGAGGCGAGTACT
CCGCTGTGTGTCGATGGACGGTGCACAATTTCCCGAGAATAAAGGCTAGG
GCACTGTGGAGCAAATACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCT
AATATATCCCAAGGGTGACTCACAGGCGCTTCCAGGGTACATCTCCATCT
ACCTCCAAATCATGGACCCTCGCGGTACCTCCTCTTCCAAATGGGACTGT
TTCGCGAGTTATAGGTTGGCAATCGTGAACGTCGCCGACGATTCCAAAAC
CATTCACCGCGATTCCTGGCACCGATTCTCCAGTAAGAAGAAATCGCACG
GGTGGTGTGATTTCACACCCTCTTCCACTGTTTTCGACCCCAAATTGGGA
TACCTGTTCAATACGGATTCCGTTTTGATCACTGCGGATATTCTCATTCT
CAATGAGTCCGTTAATTTCACCCGGGACAACAATGAGTTGCAGTCCTCCT
CTTCATCCTCGTCCTCGACAAGTTCCTCCGTTGTTGCGGGTCCTGTGTCT
GATGTGTTGAGTGGTAAGTTCACTTGGAAAGTGCATAATTTCAGTCTGTT
TAAGGAGATGATCAAAACACAGAAGATAATGAGCCCGGTGTTCCCTGCGG
GGGAGTGTAATTTGAGAATAAGTGTGTACCAAAGCTCTGTGAATGGGGTC
GAGTATTTGTCTATGTGTTTGGAGAGCAAGGACACGGATAAGACTGTGGT
GTTATCTGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTGTTGAACC
AGAGGCCTGGTTCCAATCACATGCATAGGGATTCTTATGGCCGGTTTGCG
GCTGATAATAAGAGCGGTGACAATACCAGCTTGGGATGGAATGATTACAT
GAAAATGTCAGATTTTATAGGTGTGGATTCGGGGTTTTTGGTGGATGACA
CCGCAGTTTTTAGCACCTCATTTCATGTGATCAAGGAGTTTAGCAGCTTC
TCCAAGAATGGTTCTGTGATTGCCGGGAGAAGTGGGAGTGGTGCTAGGAA
GTCTGATGGGCATATTGGAAAGTTCACTTGGAGAATTGAGAATTTTACTA
GGTTGAAGGATTTGCTAAAGAAGAGGAAAATCACGGGGCTGTGCATCAAG
AGCCGGAGGTTTCAGATTGGTAATAGGGATTGTCGACTTATTGTTTACCC
TCGAGGGCAGTCTCAGCCACCATGTCACCTTTCAGTGTTTCTTGAAGTTA
CAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTAGTCATCGT
TTATCAGTTGTGAACCAGAAGATGGAGGATAAATCTGTCACCAAGGAATC
TCAGAACCGCTACTCAAAAGCTGCAAAGGATTGGGGTTGGCGTGAATTCG
TGACTCTCACCAGTCTCTTTGATCAAGATTCAGGGTTTCTTGTCCAGGAC
ACTGTCATATTCTCTGCGGAAGTTCTTATATTGAAGGAGACATCAATAAT
GCAGGATTTTACTGAGCATGATTCTGAGTTGAGCAGCAGTGGCTCTCCTC
TGGATGCTGGCAAAAGAAGTTCATTTACATGGAAAGTTGAGAATTTCCTG
TCTTTCAAGGAAATAATGGAGACACGAAAAATCTTCAGTAAATTCTTTCA
AGCTGGTGGATGTGAACTTCGAATTGGTGTATACGAGTCGTTTGACACGA
TATGTATTTATTTAGAGAGTGACCAGGCTGTTGGTAGTGATCCAGATAAA
AATTTCTGGGTGAGATACAGGATGGCTGTTGTTAATCAAAAGAACCCAAC
CAAGACAGTTTGGAAAGAATCTTCTATCTGCACAAAGACGTGGAATAATT
CTGTTTTGCAATTCATGAAGGTGTCTGATATGTTAGAAGTGGATGCAGGA
TTTCTTGTTCGTGACACTGTTGTTTTCGTATGTGAAATATTGGATTGCTG
TCCATGGTTTGAGTTTTCCGATTTAGAGGTTTTAGCATCAGAGGATGATC
AAGATGCATTGACAACTGACCCTGATGAGCTCATTGACTCTGAAGACAGT
GAAGGGATAAGTGGAGATGAGGAAGATATTTTCAGAAATCTTCTTTCCAG
AGCTGGATTCCATTTAACATACGGAGATAATCCTTCTCAGCCACAAGTTA
CTTTAAGGGAGAAACTTCTAATGGATGCTGGTGCAATTGCAGGGTTTCTT
ACTGGTCTCCGAGTCTATCTTGACGATCCTGCAAAAGTGAAGCGCCTGCT
TCTACCTACCAAGCTGTCTGGTAGTTGTGATGGGAAGAAGGCCACCAAAG
CTGATGAATCTTCCCCAAGTTTGATGAATTTGCTGATGGGAGTTAAAGTT
TTGCAGCAAGCTATCATAGATTTACTATTAGATATAATGGTTGAGTGCTG
TCAACCTTCTGAAGTAGGCCCTGTTGCTGATTCTGTTGATGCATGTTCTA
AACCTTCTCCGGATGGAAGTGGAGCTGCTAGTCCTCTTGAGTGTGAAAGA
GAAAGTGGGGCAATGGAGTCTGCACGAGTTCCTGGTAATGAGAGATTGGA
TTCAGTTGTTGTAGAAAGCAGTAATACATCTGCTGTGCAGAGCTCTGATT
TAAAAGGGAATGGTATTCAGGAAAAAGCTGTTCCTGGACATCCCATTTGT
CCACCAGAGACATCTGCGACCGCATCAGAAAATGCATCATTTCGCTCAAA
GACCAAGTGGCCAGAACAGTCTGAGGAGCTTTTAGGTTTGATTGTAAACT
CATTAAGAGCTTTGGATGGGGCTGTTCCTCAAGGCTGTCCAGAACCAAGA
CGTCGGCCTCAATCTGCACAAAAAATTACTCTTGTATTGGACAAAGCTCC
TAAGCATTTGCAAGCTGACCTGGTTGCTTTGGTACCTAAATTGGTTGAGC
AGTCAGAACACCCACTTGCTGCCTATGCACTTCTTGAGCGTCTTCAAAAG
ACAGATGCAGAACCTGCTTTACGAATACCAGTTTTTGGGGCTCTTAGTCA
ATTGGAGTGTGGTAGTGAAGTTTGGGAACGCATTCTTTTTCAGTCATTTG
AGCTTTTGACTGACTCAAATGATGAACCCCTTGCTACAACGATAGATTTT
ATATTCAAAGCGGCATCTCAATGTCAACACCTCCCTGAAGCAGTTAGGTC
TGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCTTGCGTCC
TTGATTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCTGAAACC
ATACTTAGGGACATTGATTGCGACGATGACTATGGTGACAATTGCTCAGC
TCTTCCATGTGGGATTTTCTTATTCGGAGAACATGGCACTTCTCCCAGTG
GGCTGCATGTGATTGATGAGCAGGCTTATCAAGCTAGTCGTCATTTTTCT
GATATTTATATACTGTTTGAGATGTTATCTATTCCTTGCCTTGTTGCTGA
AGCTTCCCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATAAGTGCTC
AGTCTGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGATTGAACAAT
AATGGAAGATATGTTTCTGAAAATTTCCAACATACAGATGGTGCTACAGA
AGGAGATGCCTGTGAGCAATTGGGAGCTCAGAGGGATGATTACACTTCTG
TTCTTGGCCTTGCTGAAAATTTGGCCCTCTCTAGAGATCCATGCGTGAAA
GAATTTGTTAAACTGCTCTACATGATAATGTTTAGATGGTTTGCCAATGA
ATCTTATAGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCACTAGCA
ATACTGACAGTGGTCGTGAAGTAGATTTTGATTTGGATATATTGGTTACT
TTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTATGATGCG
TGAAGTTGCTGAACTTGCAAATGTTGATAGGGCTGCACTATGGCACCAGT
TGTGCGCTAGCGAGGATGAAATTATTCGCGTTCGTGAAGAAAGCAAAACT
GAGATTTCTAATATGGCTAAGGAAAAATCTGTTATATCACAAAAGCTAAG
TGAATCTGAAGTGACAAACAATCGATTGAAGTCTGAAATGAGGGCTGAGA
TGGATCGATTTTCTCGGGAAAAGAAGGAACTAGCTGAACAAGCTCAAGAA
GTTGAGAGTCAGCTTGAATGGCTCCGCTCAGAACGAGATGATGAAATTGC
AAAGCTCTCTGCGGAGAAAAAAGCTCTTCATGACCGTTTACATGATGCAG
AGACGCAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAAAGAAA
GTAGTCAAGGAGAAAAATGCCCTTGCTGAGAGATTGAAGAATGCTGAAGC
TGCACGCAAGAGATTTGATGAAGAACTGAAAAGATTTGCGACAGAGAATG
TGACTCGGGAGGAAATTCGGCAATCCCTTGAAGACGAAGTCCGTAGATTG
ACTCAAACGGTTGGGCAAACTGAAGGGGAAAAGCGTGAGAAGGAAGAGCA
GGTTGCTAGGTGTGAAGCATATATTGATGGCATGGAATCAAAGTTGCAAG
CTTGCCAGCAATATATTCACACACTTGAGGCCTCACTCCAGGAGGAAATG
TCAAGACATGCACCTCTATACGGCGCTGGTCTGGAGGCTTTGTCATTGAA
AGAGTTGGAAACACTATCACGTATTCATGAAGATGGGCTTAGGCAGATCC
ATGCCATTCAACAGCGTAAAGGGAGTCCTGGTGGGAGCCCTCTTGTGAGT
CCCCATGCTCTCCCTCACACCCATGGATTGTATCCAACTGCCTCCCTCCC
TATGGCTGTGGGACTGCCTCCCTCAATCATCCCAAATGGTGTGGGGATCC
ACAGCAACGGCCATGTCAATGGTGCAGTTGGACCCTGGTTTAACCACTCT
TGAATTCTCTCTCGCTCGGGTAATACAATGTTATTCTTTTCGAGTTATTT
GTTTGGTATTTTGGCCGATAGAACTGTTGGAGCTGCCTTACAACAACAAA
TGTTAATCCAGTGGAACTATCAGTTGCAAATGCCGTACTCATTTGCGCCT
ACGTCTTTTTGAGGGGGAAATTATTACTTACAGGCTTTTTCATCTTTCCA
TAGTTATAGCTTACTCTTATTACATAGTTTGGCCGTATGGTTGATTCTAT
TTTTATCCCGGGCCACAGTTTAAGCGCTGTAAGAAGTCTTAACTCACTTT
TTAATACGTAATCAACAAAGAAAATCCTTTTTCCTCTGGTTATGCGATTT
AGGTATATTTAATTTTTCTTTTCACCAGTTTTGTAGTTACAAGGTATACT
TAAATTCATTCCATTATATTGTGAAATG
back to top

protein sequence of Vigun09g211200.1_Vu_IT97K-499-35_v1.1

>Vigun09g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g211200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=1676bp
MKQASAEAVPSLSSTPSFTEATTSSSSSAAAAEDLAVGSRDGGGGAQETV
AVDRRGEYSAVCRWTVHNFPRIKARALWSKYFEVGGYDCRLLIYPKGDSQ
ALPGYISIYLQIMDPRGTSSSKWDCFASYRLAIVNVADDSKTIHRDSWHR
FSSKKKSHGWCDFTPSSTVFDPKLGYLFNTDSVLITADILILNESVNFTR
DNNELQSSSSSSSSTSSSVVAGPVSDVLSGKFTWKVHNFSLFKEMIKTQK
IMSPVFPAGECNLRISVYQSSVNGVEYLSMCLESKDTDKTVVLSDRSCWC
LFRMSVLNQRPGSNHMHRDSYGRFAADNKSGDNTSLGWNDYMKMSDFIGV
DSGFLVDDTAVFSTSFHVIKEFSSFSKNGSVIAGRSGSGARKSDGHIGKF
TWRIENFTRLKDLLKKRKITGLCIKSRRFQIGNRDCRLIVYPRGQSQPPC
HLSVFLEVTDSRNTSSDWSCFVSHRLSVVNQKMEDKSVTKESQNRYSKAA
KDWGWREFVTLTSLFDQDSGFLVQDTVIFSAEVLILKETSIMQDFTEHDS
ELSSSGSPLDAGKRSSFTWKVENFLSFKEIMETRKIFSKFFQAGGCELRI
GVYESFDTICIYLESDQAVGSDPDKNFWVRYRMAVVNQKNPTKTVWKESS
ICTKTWNNSVLQFMKVSDMLEVDAGFLVRDTVVFVCEILDCCPWFEFSDL
EVLASEDDQDALTTDPDELIDSEDSEGISGDEEDIFRNLLSRAGFHLTYG
DNPSQPQVTLREKLLMDAGAIAGFLTGLRVYLDDPAKVKRLLLPTKLSGS
CDGKKATKADESSPSLMNLLMGVKVLQQAIIDLLLDIMVECCQPSEVGPV
ADSVDACSKPSPDGSGAASPLECERESGAMESARVPGNERLDSVVVESSN
TSAVQSSDLKGNGIQEKAVPGHPICPPETSATASENASFRSKTKWPEQSE
ELLGLIVNSLRALDGAVPQGCPEPRRRPQSAQKITLVLDKAPKHLQADLV
ALVPKLVEQSEHPLAAYALLERLQKTDAEPALRIPVFGALSQLECGSEVW
ERILFQSFELLTDSNDEPLATTIDFIFKAASQCQHLPEAVRSVRVRLKNL
GLEVSPCVLDFLSKTINSWGDVAETILRDIDCDDDYGDNCSALPCGIFLF
GEHGTSPSGLHVIDEQAYQASRHFSDIYILFEMLSIPCLVAEASQTFERA
VARGAISAQSVALVLQSRLSQRLNNNGRYVSENFQHTDGATEGDACEQLG
AQRDDYTSVLGLAENLALSRDPCVKEFVKLLYMIMFRWFANESYRGRMLK
RLVDRATSNTDSGREVDFDLDILVTLVCEEQEFIRPVLSMMREVAELANV
DRAALWHQLCASEDEIIRVREESKTEISNMAKEKSVISQKLSESEVTNNR
LKSEMRAEMDRFSREKKELAEQAQEVESQLEWLRSERDDEIAKLSAEKKA
LHDRLHDAETQLSQLKSRKRDELKKVVKEKNALAERLKNAEAARKRFDEE
LKRFATENVTREEIRQSLEDEVRRLTQTVGQTEGEKREKEEQVARCEAYI
DGMESKLQACQQYIHTLEASLQEEMSRHAPLYGAGLEALSLKELETLSRI
HEDGLRQIHAIQQRKGSPGGSPLVSPHALPHTHGLYPTASLPMAVGLPPS
IIPNGVGIHSNGHVNGAVGPWFNHS*
back to top

mRNA from alignment at Vu09:38541570..38550659+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g211200.1; organism=Vigna unguiculata; type=mRNA; length=9090bp; location=Sequence derived from: Vu09:38541570..38550659+ (Vigna unguiculata
TTGTACTAATCCGACGGATAAAAAGGGTTAGCATGAAGAAAGAAACCTAG
TTTTGCTTGCACTGTAACCTACCCTATGAAAACAGAATGAAGAAACAAAG
GCGCAAGATTATTATCATACGCCAGGAGGGATGAGGCGATAAAAGAAAGA
GGCGCACTGTGCTATCTTGCGCCCACGTTGTCCAAACCTGTTTGTGTGTG
CTTTCATTCTCTCGCTTGCACCACATCTCTCTGCCTCCTCTCTCTGCGTC
CAAGATTTCAATACTCGTGAGAAAACTACTAACACGAACAAGAAGAACAG
GAACGAACAGAAGGAAAACGAAACAATGAAGCAAGCTTCGGCCGAGGCAG
TTCCTTCGCTATCTTCCACGCCATCGTTCACGGAGGCGACGACATCGTCG
TCATCATCCGCTGCTGCGGCGGAGGACCTGGCGGTAGGGTCACGGGACGG
TGGCGGCGGCGCTCAGGAGACGGTGGCGGTGGATCGGCGAGGCGAGTACT
CCGCTGTGTGTCGATGGACGGTGCACAATTTCCCGAGAATAAAGGCTAGG
GCACTGTGGAGCAAATACTTCGAGGTAGGCGGTTACGATTGTCGGTTGCT
AATATATCCCAAGGGTGACTCACAGGCGCTTCCAGGGTACATCTCCATCT
ACCTCCAAATCATGGACCCTCGCGGTACCTCCTCTTCCAAATGGGACTGT
TTCGCGAGTTATAGGTTGGCAATCGTGAACGTCGCCGACGATTCCAAAAC
CATTCACCGCGATTCCTGGCACCGATTCTCCAGTAAGAAGAAATCGCACG
GGTGGTGTGATTTCACACCCTCTTCCACTGTTTTCGACCCCAAATTGGGA
TACCTGTTCAATACGGATTCCGTTTTGATCACTGCGGATATTCTCATTCT
CAATGAGTCCGTTAATTTCACCCGGGACAACAATGAGTTGCAGTCCTCCT
CTTCATCCTCGTCCTCGACAAGTTCCTCCGTTGTTGCGGGTCCTGTGTCT
GATGTGTTGAGTGGTAAGTTCACTTGGAAAGTGCATAATTTCAGTCTGTT
TAAGGAGATGATCAAAACACAGAAGATAATGAGCCCGGTGTTCCCTGCGG
GGGAGTGTAATTTGAGAATAAGTGTGTACCAAAGCTCTGTGAATGGGGTC
GAGTATTTGTCTATGTGTTTGGAGAGCAAGGACACGGATAAGACTGTGGT
GTTATCTGATAGGAGTTGTTGGTGTTTGTTTAGGATGTCTGTGTTGAACC
AGAGGCCTGGTTCCAATCACATGCATAGGGATTCTTATGGCCGGTTTGCG
GCTGATAATAAGAGCGGTGACAATACCAGCTTGGGATGGAATGATTACAT
GAAAATGTCAGATTTTATAGGTGTGGATTCGGGGTTTTTGGTGGATGACA
CCGCAGTTTTTAGCACCTCATTTCATGTGATCAAGGAGTTTAGCAGCTTC
TCCAAGAATGGTTCTGTGATTGCCGGGAGAAGTGGGAGTGGTGCTAGGAA
GTCTGATGGGCATATTGGAAAGTTCACTTGGAGAATTGAGAATTTTACTA
GGTTGAAGGATTTGCTAAAGAAGAGGAAAATCACGGGGCTGTGCATCAAG
AGCCGGAGGTTTCAGATTGGTAATAGGGATTGTCGACTTATTGTTTACCC
TCGAGGTGTGCAATATTTTCGCTCTGCAAATCTATTTTCATTTTCTGTGA
ACTACTTTCTTAGGCTTATTAGTTAGCTATTAAATATTTGCGGTGTTTGT
GAGTCAAAACTCCATTAGATGTGATCTTGTACGCATTTTAGTGCAATTAT
TGTCTATATTGGTAGAATTGAAAGGGCATTCTTGCTGCAATTTTATCAGC
CTTTCTATCTTTGAAATTTTCATTGAATTTGATATTTCATGCTTGTAGTT
GCATATCTACTGATACCACCATTAGCTTAATTGATAATCCAGATATTGGG
TTTTGATGTGTGAATATAATAGTTACTCAGTATATTTAAAAACAGAGAAT
ACTTTTAGTTTTTTTTTGAAAAATGGAGTCTGATGAATTTTTATGTGATT
TTGATGCTATCAGGGCAGTCTCAGCCACCATGTCACCTTTCAGTGTTTCT
TGAAGTTACAGATTCAAGAAATACTTCCAGTGATTGGAGTTGTTTTGTTA
GTCATCGTTTATCAGTTGTGAACCAGAAGATGGAGGATAAATCTGTCACC
AAGGAATCTCAGAACCGCTACTCAAAAGCTGCAAAGGATTGGGGTTGGCG
TGAATTCGTGACTCTCACCAGTCTCTTTGATCAAGATTCAGGGTTTCTTG
TCCAGGACACTGTCATATTCTCTGCGGAAGTTCTTATATTGAAGGAGACA
TCAATAATGCAGGATTTTACTGAGCATGATTCTGAGTTGAGCAGCAGTGG
CTCTCCTCTGGATGCTGGCAAAAGAAGTTCATTTACATGGAAAGTTGAGA
ATTTCCTGTCTTTCAAGGAAATAATGGAGACACGAAAAATCTTCAGTAAA
TTCTTTCAAGCTGGTGGATGTGAACTTCGAATTGGTAGGTGTTCTTGCAA
ACATATATTATTTCCTGCATTTTATTCACTGGTAGTAGTAGCAGTAGTAA
ACTTTTATGTTTTTATTCGTTGATTAAGCTTACTTTTCCATGACCCAGGT
GTATACGAGTCGTTTGACACGATATGTATTTATTTAGAGAGTGACCAGGC
TGTTGGTAGTGATCCAGATAAAAATTTCTGGGTGAGATACAGGATGGCTG
TTGTTAATCAAAAGAACCCAACCAAGACAGTTTGGAAAGAATCTTCTATC
TGCACAAAGACGTGGAATAATTCTGTTTTGCAATTCATGAAGGTGTCTGA
TATGTTAGAAGTGGATGCAGGATTTCTTGTTCGTGACACTGTTGTTTTCG
TATGTGAAATATTGGATTGCTGTCCATGGTTTGAGTTTTCCGATTTAGAG
GTAAGTCCTTATGGATTGCTTGTCTTCGTGTTACATTGTACTTACAAATA
TTGTACATACAAATATCATTTAATAGAGGCCAGATATTCTTGCCCCATGT
TTTAAGACTTTCCTCCTACCATCTATAGGATGACCTATTCTTGACTTTAG
ATAAGAGACTACATGTTATCCTGTATTCATAGTTATTGATTTGAACTGGC
TCTTCTGCCTCTGACATGTCACTAATTTAACATATAATATCTTTTTTTAT
GACTCATTTTTAATGTAAGATCGGAACAAGCCAATTAGGAAATATGGCCT
CTTCCTTGGAACTTTTGCTTGTGATTAGCCTGATAAGATGCATGGAACAA
GCTGATAAGTCACGAGTTACAGAAGTTGATTAATGCTTCAGTTCATAATT
TTGCATCCCTTGAACTTCTTATTGTACAATAAAAAATTGTAAGCAGATTT
CTATCCCATACCTGAGCCATATGATATATTATGATTATGTCTTGTGTGAA
AGATAAAAAATGGTTATATGTATTACATTTTAGCTTCTCACATGTTGTAA
AATCGGGATTTTGTTATGGATTTTATAATACCTACTGGTTATATTAAATT
TTGGTTGCTCTTATCATACGGTTGCAGACATATCATCTGTTTTTTTCTTC
AATATTCAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACAACTGA
CCCTGATGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATG
AGGAAGATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTCCATTTAACA
TACGGAGATAATCCTTCTCAGCCACAAGTTACTTTAAGGGAGAAACTTCT
AATGGATGCTGGTGCAATTGCAGGGTTTCTTACTGGTCTCCGAGTCTATC
TTGACGATCCTGCAAAAGTGAAGCGCCTGCTTCTACCTACCAAGCTGTCT
GGTAGTTGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAG
TTTGATGAATTTGCTGATGGGAGTTAAAGTTTTGCAGCAAGCTATCATAG
ATTTACTATTAGATATAATGGTTGAGTGCTGTCAACCTTCTGAAGTAGGC
CCTGTTGCTGATTCTGTTGATGCATGTTCTAAACCTTCTCCGGATGGAAG
TGGAGCTGCTAGTCCTCTTGAGTGTGAAAGAGAAAGTGGGGCAATGGAGT
CTGCACGAGTTCCTGGTAATGAGAGATTGGATTCAGTTGTTGTAGAAAGC
AGTAATACATCTGCTGTGCAGAGCTCTGATTTAAAAGGGAATGGTATTCA
GGAAAAAGCTGTTCCTGGACATCCCATTTGTCCACCAGAGACATCTGCGA
CCGCATCAGAAAATGCATCATTTCGCTCAAAGGTACAACTTTTTTTAATG
TCCGTTAGAGGTGTATTCTGTTACACATATCTTTGGTTTTGATTTTTGTG
AATTTGAAACTTCAGACCAAGTGGCCAGAACAGTCTGAGGAGCTTTTAGG
TTTGATTGTAAACTCATTAAGAGCTTTGGATGGGGCTGTTCCTCAAGGCT
GTCCAGAACCAAGACGTCGGCCTCAATCTGCACAAAAAATTACTCTTGTA
TTGGACAAAGCTCCTAAGCATTTGCAAGCTGACCTGGTTGCTTTGGTACC
TAAATTGGTTGAGCAGTCAGAACACCCACTTGCTGCCTATGCACTTCTTG
AGCGTCTTCAAAAGACAGATGCAGAACCTGCTTTACGAATACCAGTGAGA
AACTAATATTTTTTTTCCAAAATACCTTACTTGAATTGTTTAATCACATG
CATTAATTAATTCAGGGAGCAATCCTAATTTAGTTACACTTGTGCTGCAT
TTCCACCTCTGTCAACGCTGAATATGGTTGCATTGGTTTTCTCCTATTGA
TGCTGTTCTATTTTTCAGGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGG
TAGTGAAGTTTGGGAACGCATTCTTTTTCAGTCATTTGAGCTTTTGACTG
ACTCAAATGATGAACCCCTTGCTACAACGATAGATTTTATATTCAAAGCG
GCATCTCAATGTCAACACCTCCCTGAAGCAGTAAGCTTTGAAGATAAATA
GTTGGGAATTGCACTATGTTACACTGTTTAGATTTTGATGCACTGTCTAT
GCAAAATTGTTCTTTACTATCATTCAATAATGCTTTGCTGCATCATTTAA
TGAGCTTTACATCTTGTGAAATTGTTAGTATTGTCAAAATCATTAAACAG
GGTGCCAACTTAAAAATGGATGTTTAGTGTGCAAAAGTTGTAAGCAGACA
AGTCATCAAATGTTTCAAGCATTTGTAACATGATTTCCCCTTATGCAGGT
TAGGTCTGTTCGTGTCAGGCTGAAAAATCTAGGTCTTGAGGTGTCACCTT
GCGTCCTTGATTTTTTGAGTAAGACTATAAATAGTTGGGGGGATGTTGCT
GAAACCATACTTAGGGACATTGATTGCGACGATGACTATGGTGACAATTG
CTCAGCTCTTCCATGTGGGATTTTCTTATTCGGAGAACATGGCACTTCTC
CCAGTGGGCTGCATGTGATTGATGAGCAGGCTTATCAAGCTAGTCGTCAT
TTTTCTGATATTTATATACTGTTTGAGATGTTATCTATTCCTTGCCTTGT
TGCTGAAGCTTCCCAAACATTTGAGAGAGCTGTAGCTCGAGGTGCAATAA
GTGCTCAGTCTGTAGCCCTGGTATTGCAAAGCCGTCTTTCCCAAAGATTG
AACAATAATGGAAGATATGTTTCTGAAAATTTCCAACATACAGATGGTGC
TACAGAAGGAGATGCCTGTGAGCAATTGGGAGCTCAGAGGGATGATTACA
CTTCTGTTCTTGGCCTTGCTGAAAATTTGGCCCTCTCTAGAGATCCATGC
GTGAAAGAATTTGTTAAACTGCTCTACATGATAATGTTTAGATGGTTTGC
CAATGAATCTTATAGGGGGAGGATGCTGAAGAGGCTTGTTGACCGTGCCA
CTAGCAATACTGACAGTGGTCGTGAAGTAGATTTTGATTTGGATATATTG
GTTACTTTGGTCTGTGAGGAGCAGGAGTTTATCAGGCCTGTTTTGAGTAT
GATGCGTGAAGTTGCTGAACTTGCAAATGTTGATAGGGCTGCACTATGGC
ACCAGTTGTGCGCTAGCGAGGATGAAATTATTCGCGTTCGTGAAGAAAGC
AAAACTGAGATTTCTAATATGGCTAAGGAAAAATCTGTTATATCACAAAA
GCTAAGTGAATCTGAAGTGACAAACAATCGATTGAAGGTATTTCATGTCT
TAGTTGATAACATACTGTGGTTACCTCATGTTAATTGCTAATGGAGAATT
TAGGTCTAACGCACTTCATGATTCAACAGTCTGAAATGAGGGCTGAGATG
GATCGATTTTCTCGGGAAAAGAAGGAACTAGCTGAACAAGCTCAAGAAGT
TGAGAGTCAGCTTGAATGGCTCCGCTCAGAACGAGATGATGAAATTGCAA
AGCTCTCTGCGGAGAAAAAAGCTCTTCATGACCGTTTACATGATGCAGAG
ACGCAACTTTCTCAGTTGAAGTCTCGGAAACGTGATGAATTAAAGGTATT
GTTCAAAAAGTTTGATTTTCTACATTGAAAAAAAAAAGATTGTGCAACTA
TGCTAATTTTAAAAGCTGTGCACTGCACAATAACTTTTATGCTTATGATG
ATTATTCTTACATTTTTTGAGTGCATCTTGAAGGAGATACCATTTAAATT
TTACTCATAGTTGGTGCATATGCATTTGCACTCTTCAGTATGAAATTGTC
TACTTTTTTTGCTTTATCTGACTCTACCTCACCTGTGATTCTTGCTATGT
TTCCCCCTCTTTCAGTCCTTCCTATAAACTCTGGTATGGGCGGATGTTAT
CCATGCTTTGTTATTGCCAATTCACGAAAGATGGTTTTAAGCTATTATTC
TACTTAGTTTTTCAGCTGACAGGTTGCTCCTGTGTTAGGAAGGAGTTTGA
TCCTACCTGGTGCCATACGTCTAATTAAATATTAGTTTCAGTACACAGTC
TGCTCTCATACTGTCCAACCTTCAAGGCCAAAGTTGTTTTTGTGTGTAAG
GGCGTATTACTGGTATAAGTCATTCCTAGGCTTCCATTAATGGGGCTGGA
TCTACTCTAGCACCATATCCCTCCAGCTTGCTCCATCCTCTTTATCTGTC
TCCTTCTTCATCTCTTTAACCTCACACTTACGCATTCTCTCCTCTCTCTC
CCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATTTTTTGCTTGCTA
CAGAGGGGATCCAACTTGCCAATTAACCACATGAGTTTTTCAAAAGAGTT
GGTCCTTGACTTGAATCATGAGCTATAAAGTTCTCTTTAGTCATACTTTA
TTTCATTTATCAAATTACTTTATAGAAAATATCATGATTAACTATTTTAT
ATTCTCTTTTACTTGGTTGTCGATTATCATCAATAATCTCATTGGTGATA
TTTATGCATCAACATGTGTTTGAAATAATCCTATGGTGATGATATCCACA
TTTTTTTTCTGTGGCACTCTTAGAAATGGTGGGCCAGTGAAAGGAGCTTC
ATTTTGGTTCTGAGTTGATTAGTGTGGTTGTTTGGTTTATAAGATTTTAC
TTTACTTTTAATTACAAAACGTTACATTTGTTTTCATTTTGGTGCCAGTG
AAATGATTTGTTTTCTATTTTCATTTCTGTTGAAAATCAATTGTTTTCAT
TTAGTGAAAACAACTTTTCATGGTTTTCTATTTTCTTTTTTCAATGTCTA
CTGTATAAACTTTGGAAAACAAGAAGAAAGTGAAAACAGCGTGGCTTTTT
GTAAATTGTATCTAATGTTAAAACAGGAAATGAAAACAAGAAGTTTTATT
TTTCAAATTAGATGACCCTTAATTTTTCATTGTGTATGATGGGCTCAAAT
TGAAAATTAATGCGAATTTTATTACATACAGAAAGTAGTCAAGGAGAAAA
ATGCCCTTGCTGAGAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTT
GATGAAGAACTGAAAAGATTTGCGACAGAGAATGTGACTCGGGAGGAAAT
TCGGCAATCCCTTGAAGACGAAGTCCGTAGATTGACTCAAACGGTTGGGC
AAACTGAAGGGGAAAAGCGTGAGAAGGAAGAGCAGGTTGCTAGGTGTGAA
GCATATATTGATGGCATGGAATCAAAGTTGCAAGCTTGCCAGGTCTGTAT
TGACATAGAATTTGTACTTTTCTTACTGTTTTTATCTTTTGATAATTGTT
TATTGCCTTATATGTTTTCATGTTGAACTTATATGATAGAGTTAATAATG
TGTTTGTGTTGGTTGTGCAGCAATATATTCACACACTTGAGGCCTCACTC
CAGGAGGAAATGTCAAGACATGCACCTCTATACGGCGCTGGTCTGGAGGC
TTTGTCATTGAAAGAGTTGGAAACACTATCACGTATTCATGAAGATGGGC
TTAGGCAGATCCATGCCATTCAACAGCGTAAAGGGAGTCCTGGTGGGAGC
CCTCTTGTGAGTCCCCATGCTCTCCCTCACACCCATGGATTGTATCCAAC
TGCCTCCCTCCCTATGGCTGTGGGACTGCCTCCCTCAATCATCCCAAATG
GTGTGGGGATCCACAGCAACGGCCATGTCAATGGTGCAGTTGGACCCTGG
TTTAACCACTCTTGAATTCTCTCTCGCTCGGGTAATACAATGTTATTCTT
TTCGAGTTATTTGTTTGGTATTTTGGCCGATAGAACTGTTGGAGCTGCCT
TACAACAACAAATGTTAATCCAGTGGAACTATCAGTTGCAAATGCCGTAC
TCATTTGCGCCTACGTCTTTTTGAGGGGGAAATTATTACTTACAGGCTTT
TTCATCTTTCCATAGTTATAGCTTACTCTTATTACATAGTTTGGCCGTAT
GGTTGATTCTATTTTTATCCCGGGCCACAGTTTAAGCGCTGTAAGAAGTC
TTAACTCACTTTTTAATACGTAATCAACAAAGAAAATCCTTTTTCCTCTG
GTTATGCGATTTAGGTATATTTAATTTTTCTTTTCACCAGTTTTGTAGTT
ACAAGGTATACTTAAATTCATTCCATTATATTGTGAAATG
back to top

Coding sequence (CDS) from alignment at Vu09:38541570..38550659+

>Vigun09g211200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g211200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g211200.1; organism=Vigna unguiculata; type=CDS; length=5028bp; location=Sequence derived from: Vu09:38541570..38550659+ (Vigna unguiculata
ATGAAGCAAGCTTCGGCCGAGGCAGTTCCTTCGCTATCTTCCACGCCATC
GTTCACGGAGGCGACGACATCGTCGTCATCATCCGCTGCTGCGGCGGAGG
ACCTGGCGGTAGGGTCACGGGACGGTGGCGGCGGCGCTCAGGAGACGGTG
GCGGTGGATCGGCGAGGCGAGTACTCCGCTGTGTGTCGATGGACGGTGCA
CAATTTCCCGAGAATAAAGGCTAGGGCACTGTGGAGCAAATACTTCGAGG
TAGGCGGTTACGATTGTCGGTTGCTAATATATCCCAAGGGTGACTCACAG
GCGCTTCCAGGGTACATCTCCATCTACCTCCAAATCATGGACCCTCGCGG
TACCTCCTCTTCCAAATGGGACTGTTTCGCGAGTTATAGGTTGGCAATCG
TGAACGTCGCCGACGATTCCAAAACCATTCACCGCGATTCCTGGCACCGA
TTCTCCAGTAAGAAGAAATCGCACGGGTGGTGTGATTTCACACCCTCTTC
CACTGTTTTCGACCCCAAATTGGGATACCTGTTCAATACGGATTCCGTTT
TGATCACTGCGGATATTCTCATTCTCAATGAGTCCGTTAATTTCACCCGG
GACAACAATGAGTTGCAGTCCTCCTCTTCATCCTCGTCCTCGACAAGTTC
CTCCGTTGTTGCGGGTCCTGTGTCTGATGTGTTGAGTGGTAAGTTCACTT
GGAAAGTGCATAATTTCAGTCTGTTTAAGGAGATGATCAAAACACAGAAG
ATAATGAGCCCGGTGTTCCCTGCGGGGGAGTGTAATTTGAGAATAAGTGT
GTACCAAAGCTCTGTGAATGGGGTCGAGTATTTGTCTATGTGTTTGGAGA
GCAAGGACACGGATAAGACTGTGGTGTTATCTGATAGGAGTTGTTGGTGT
TTGTTTAGGATGTCTGTGTTGAACCAGAGGCCTGGTTCCAATCACATGCA
TAGGGATTCTTATGGCCGGTTTGCGGCTGATAATAAGAGCGGTGACAATA
CCAGCTTGGGATGGAATGATTACATGAAAATGTCAGATTTTATAGGTGTG
GATTCGGGGTTTTTGGTGGATGACACCGCAGTTTTTAGCACCTCATTTCA
TGTGATCAAGGAGTTTAGCAGCTTCTCCAAGAATGGTTCTGTGATTGCCG
GGAGAAGTGGGAGTGGTGCTAGGAAGTCTGATGGGCATATTGGAAAGTTC
ACTTGGAGAATTGAGAATTTTACTAGGTTGAAGGATTTGCTAAAGAAGAG
GAAAATCACGGGGCTGTGCATCAAGAGCCGGAGGTTTCAGATTGGTAATA
GGGATTGTCGACTTATTGTTTACCCTCGAGGGCAGTCTCAGCCACCATGT
CACCTTTCAGTGTTTCTTGAAGTTACAGATTCAAGAAATACTTCCAGTGA
TTGGAGTTGTTTTGTTAGTCATCGTTTATCAGTTGTGAACCAGAAGATGG
AGGATAAATCTGTCACCAAGGAATCTCAGAACCGCTACTCAAAAGCTGCA
AAGGATTGGGGTTGGCGTGAATTCGTGACTCTCACCAGTCTCTTTGATCA
AGATTCAGGGTTTCTTGTCCAGGACACTGTCATATTCTCTGCGGAAGTTC
TTATATTGAAGGAGACATCAATAATGCAGGATTTTACTGAGCATGATTCT
GAGTTGAGCAGCAGTGGCTCTCCTCTGGATGCTGGCAAAAGAAGTTCATT
TACATGGAAAGTTGAGAATTTCCTGTCTTTCAAGGAAATAATGGAGACAC
GAAAAATCTTCAGTAAATTCTTTCAAGCTGGTGGATGTGAACTTCGAATT
GGTGTATACGAGTCGTTTGACACGATATGTATTTATTTAGAGAGTGACCA
GGCTGTTGGTAGTGATCCAGATAAAAATTTCTGGGTGAGATACAGGATGG
CTGTTGTTAATCAAAAGAACCCAACCAAGACAGTTTGGAAAGAATCTTCT
ATCTGCACAAAGACGTGGAATAATTCTGTTTTGCAATTCATGAAGGTGTC
TGATATGTTAGAAGTGGATGCAGGATTTCTTGTTCGTGACACTGTTGTTT
TCGTATGTGAAATATTGGATTGCTGTCCATGGTTTGAGTTTTCCGATTTA
GAGGTTTTAGCATCAGAGGATGATCAAGATGCATTGACAACTGACCCTGA
TGAGCTCATTGACTCTGAAGACAGTGAAGGGATAAGTGGAGATGAGGAAG
ATATTTTCAGAAATCTTCTTTCCAGAGCTGGATTCCATTTAACATACGGA
GATAATCCTTCTCAGCCACAAGTTACTTTAAGGGAGAAACTTCTAATGGA
TGCTGGTGCAATTGCAGGGTTTCTTACTGGTCTCCGAGTCTATCTTGACG
ATCCTGCAAAAGTGAAGCGCCTGCTTCTACCTACCAAGCTGTCTGGTAGT
TGTGATGGGAAGAAGGCCACCAAAGCTGATGAATCTTCCCCAAGTTTGAT
GAATTTGCTGATGGGAGTTAAAGTTTTGCAGCAAGCTATCATAGATTTAC
TATTAGATATAATGGTTGAGTGCTGTCAACCTTCTGAAGTAGGCCCTGTT
GCTGATTCTGTTGATGCATGTTCTAAACCTTCTCCGGATGGAAGTGGAGC
TGCTAGTCCTCTTGAGTGTGAAAGAGAAAGTGGGGCAATGGAGTCTGCAC
GAGTTCCTGGTAATGAGAGATTGGATTCAGTTGTTGTAGAAAGCAGTAAT
ACATCTGCTGTGCAGAGCTCTGATTTAAAAGGGAATGGTATTCAGGAAAA
AGCTGTTCCTGGACATCCCATTTGTCCACCAGAGACATCTGCGACCGCAT
CAGAAAATGCATCATTTCGCTCAAAGACCAAGTGGCCAGAACAGTCTGAG
GAGCTTTTAGGTTTGATTGTAAACTCATTAAGAGCTTTGGATGGGGCTGT
TCCTCAAGGCTGTCCAGAACCAAGACGTCGGCCTCAATCTGCACAAAAAA
TTACTCTTGTATTGGACAAAGCTCCTAAGCATTTGCAAGCTGACCTGGTT
GCTTTGGTACCTAAATTGGTTGAGCAGTCAGAACACCCACTTGCTGCCTA
TGCACTTCTTGAGCGTCTTCAAAAGACAGATGCAGAACCTGCTTTACGAA
TACCAGTTTTTGGGGCTCTTAGTCAATTGGAGTGTGGTAGTGAAGTTTGG
GAACGCATTCTTTTTCAGTCATTTGAGCTTTTGACTGACTCAAATGATGA
ACCCCTTGCTACAACGATAGATTTTATATTCAAAGCGGCATCTCAATGTC
AACACCTCCCTGAAGCAGTTAGGTCTGTTCGTGTCAGGCTGAAAAATCTA
GGTCTTGAGGTGTCACCTTGCGTCCTTGATTTTTTGAGTAAGACTATAAA
TAGTTGGGGGGATGTTGCTGAAACCATACTTAGGGACATTGATTGCGACG
ATGACTATGGTGACAATTGCTCAGCTCTTCCATGTGGGATTTTCTTATTC
GGAGAACATGGCACTTCTCCCAGTGGGCTGCATGTGATTGATGAGCAGGC
TTATCAAGCTAGTCGTCATTTTTCTGATATTTATATACTGTTTGAGATGT
TATCTATTCCTTGCCTTGTTGCTGAAGCTTCCCAAACATTTGAGAGAGCT
GTAGCTCGAGGTGCAATAAGTGCTCAGTCTGTAGCCCTGGTATTGCAAAG
CCGTCTTTCCCAAAGATTGAACAATAATGGAAGATATGTTTCTGAAAATT
TCCAACATACAGATGGTGCTACAGAAGGAGATGCCTGTGAGCAATTGGGA
GCTCAGAGGGATGATTACACTTCTGTTCTTGGCCTTGCTGAAAATTTGGC
CCTCTCTAGAGATCCATGCGTGAAAGAATTTGTTAAACTGCTCTACATGA
TAATGTTTAGATGGTTTGCCAATGAATCTTATAGGGGGAGGATGCTGAAG
AGGCTTGTTGACCGTGCCACTAGCAATACTGACAGTGGTCGTGAAGTAGA
TTTTGATTTGGATATATTGGTTACTTTGGTCTGTGAGGAGCAGGAGTTTA
TCAGGCCTGTTTTGAGTATGATGCGTGAAGTTGCTGAACTTGCAAATGTT
GATAGGGCTGCACTATGGCACCAGTTGTGCGCTAGCGAGGATGAAATTAT
TCGCGTTCGTGAAGAAAGCAAAACTGAGATTTCTAATATGGCTAAGGAAA
AATCTGTTATATCACAAAAGCTAAGTGAATCTGAAGTGACAAACAATCGA
TTGAAGTCTGAAATGAGGGCTGAGATGGATCGATTTTCTCGGGAAAAGAA
GGAACTAGCTGAACAAGCTCAAGAAGTTGAGAGTCAGCTTGAATGGCTCC
GCTCAGAACGAGATGATGAAATTGCAAAGCTCTCTGCGGAGAAAAAAGCT
CTTCATGACCGTTTACATGATGCAGAGACGCAACTTTCTCAGTTGAAGTC
TCGGAAACGTGATGAATTAAAGAAAGTAGTCAAGGAGAAAAATGCCCTTG
CTGAGAGATTGAAGAATGCTGAAGCTGCACGCAAGAGATTTGATGAAGAA
CTGAAAAGATTTGCGACAGAGAATGTGACTCGGGAGGAAATTCGGCAATC
CCTTGAAGACGAAGTCCGTAGATTGACTCAAACGGTTGGGCAAACTGAAG
GGGAAAAGCGTGAGAAGGAAGAGCAGGTTGCTAGGTGTGAAGCATATATT
GATGGCATGGAATCAAAGTTGCAAGCTTGCCAGCAATATATTCACACACT
TGAGGCCTCACTCCAGGAGGAAATGTCAAGACATGCACCTCTATACGGCG
CTGGTCTGGAGGCTTTGTCATTGAAAGAGTTGGAAACACTATCACGTATT
CATGAAGATGGGCTTAGGCAGATCCATGCCATTCAACAGCGTAAAGGGAG
TCCTGGTGGGAGCCCTCTTGTGAGTCCCCATGCTCTCCCTCACACCCATG
GATTGTATCCAACTGCCTCCCTCCCTATGGCTGTGGGACTGCCTCCCTCA
ATCATCCCAAATGGTGTGGGGATCCACAGCAACGGCCATGTCAATGGTGC
AGTTGGACCCTGGTTTAACCACTCTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002083MATH/TRAF_dom
IPR008974TRAF-like
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding