Vigun09g214900.1

Transcript Overview
NameVigun09g214900.1
Unique NameVigun09g214900.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length3567
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:38926765..38938306 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL078Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL109Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL494Pisum sativum Cameor genome v1aPisum sativum
psvuL650Pisum sativum Cameor genome v1aPisum sativum
crvuL444Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL126Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0509Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL1327Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0370Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0769Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1018Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL538Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR699Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR712Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL329Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL460Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL434Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL041Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL419Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL315Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL168Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL262Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
carvuL532Cicer arietinum
ccavuL177Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR728Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR774Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR844Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL646Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL645Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL113Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR477Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g214900Vigun09g214900_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g214900.1Vigun09g214900.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g214900.1_Vu_IT97K-499-35_v1.1Vigun09g214900.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g214900.1.v1.1.five_prime_UTR.1Vigun09g214900.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g214900.1.v1.1.CDS.1Vigun09g214900.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.2Vigun09g214900.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.3Vigun09g214900.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.4Vigun09g214900.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.5Vigun09g214900.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.6Vigun09g214900.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.7Vigun09g214900.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.8Vigun09g214900.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.9Vigun09g214900.1.v1.1.CDS.9_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.10Vigun09g214900.1.v1.1.CDS.10_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.11Vigun09g214900.1.v1.1.CDS.11_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.12Vigun09g214900.1.v1.1.CDS.12_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.13Vigun09g214900.1.v1.1.CDS.13_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g214900.1.v1.1.CDS.14Vigun09g214900.1.v1.1.CDS.14_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g214900.1.v1.1.three_prime_UTR.1Vigun09g214900.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5_YEAST (Sister chromatid cohesion protein PDS5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=PDS5 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 3.384e-15
Identity = 41/123 (33.33%), Postives = 77/123 (62.60%), Query Frame = 1 
Query:  181 ALIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDDDQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDL-ECDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            AL++ KLL+H D  ++   A C+S+I R+ APDAPY D Q+ ++F+L++S FE L D  +  + ++T ++  + + RS V++ DL   + L++E+F  F+   + + P  +F+ +  I+  V+
Sbjct:   58 ALVSRKLLKHKDVGIRAFTACCLSDILRLYAPDAPYTDAQLTDIFKLVLSQFEQLGDQENGYHIQQTYLITKLLEYRSIVLLADLPSSNNLLIELFHIFYDPNKSF-PARLFNVIGGILGEVI 179
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PD5BB_XENLA (Sister chromatid cohesion protein PDS5 homolog B-B OS=Xenopus laevis OX=8355 GN=pds5b-b PE=2 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 5.203e-15
Identity = 41/123 (33.33%), Postives = 71/123 (57.72%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE C+ +  ++++  F  I   H + V   M  +M+ +V
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDCNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIV 185
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5A_DANRE (Sister chromatid cohesion protein PDS5 homolog A OS=Danio rerio OX=7955 GN=pds5a PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 3.977e-14
Identity = 52/179 (29.05%), Postives = 103/179 (57.54%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVVXXXXXXXXXXXXXXXXRV----KKDDEEAFPIAKKLGERVLESCATKLKPYLVQAV 702
            L ++  LR+ + DV++ VA C+++I RI AP+APY   D++KE+F  I    + L DT S  + +   +LE +A V+S  +  +LE C+ + +++F+  F  I   H + V   M  +M+ ++ E + ++ +LL T+L  +    K  +++A+ +A+ L +R +++  T +  +  Q +
Sbjct:   68 LASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDTILINLIPAHKNLNKQAYDLARTLLKRTVQTIETCIASFFNQVL 246
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PD5AB_XENLA (Sister chromatid cohesion protein PDS5 homolog A-B OS=Xenopus laevis OX=8355 GN=pds5a-b PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 5.547e-14
Identity = 41/120 (34.17%), Postives = 70/120 (58.33%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPY-DDDQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMT 537
            L +D  LR+ + DV++ VA C+++I RI AP+APY   D++KE+F  I    + L DT S  + +   +LE +A V+S  +  +LE C+ + +++F+  F  I   H + V   M  +M+
Sbjct:   65 LSSDFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKEIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFKTLFSVINNSHNQKVQMHMLDLMS 184
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5B_MOUSE (Sister chromatid cohesion protein PDS5 homolog B OS=Mus musculus OX=10090 GN=Pds5b PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.126e-13
Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE  + +  ++++  F  I   H + V   M  +M+ ++
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSII 185
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5B_HUMAN (Sister chromatid cohesion protein PDS5 homolog B OS=Homo sapiens OX=9606 GN=PDS5B PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.206e-13
Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE  + +  ++++  F  I   H + V   M  +M+ ++
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSII 185
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5B_RAT (Sister chromatid cohesion protein PDS5 homolog B OS=Rattus norvegicus OX=10116 GN=Pds5b PE=1 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 1.248e-13
Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE  + +  ++++  F  I   H + V   M  +M+ ++
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSII 185
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5B_CHICK (Sister chromatid cohesion protein PDS5 homolog B OS=Gallus gallus OX=9031 GN=PDS5B PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.431e-13
Identity = 39/123 (31.71%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE  + +  ++++  F  I   H + V   M  +M+ ++
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSII 185
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PDS5A_CHICK (Sister chromatid cohesion protein PDS5 homolog A OS=Gallus gallus OX=9031 GN=PDS5A PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.543e-13
Identity = 50/166 (30.12%), Postives = 98/166 (59.04%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVVXXXXXXXXXXXXXXXXRV----KKDDEEAFPIAKKLGERVLES 663
            L ++  LR+ + DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE C+ + +++F+  F  I   H + V   M  +M+ ++ E + ++ +LL ++L  +    K  +++AF +AK L +R +++
Sbjct:   67 LASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNQKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQAFDLAKVLLKRTVQT 232
[Close]
BLAST of Vigun09g214900.1 vs. DB:Swiss
Match: PD5BA_XENLA (Sister chromatid cohesion protein PDS5 homolog B-A OS=Xenopus laevis OX=8355 GN=pds5b-a PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 1.830e-13
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = 1 
Query:  184 LIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDD-DQMKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLE-CDALILEMFQHFFKAIREYHPENVFSSMETIMTLVV 546
            L +D  L+H D DV++ VA C+++I RI AP+APY   D++K++F  I    + L DT S  + +   +LE +A V+S  +  +LE  + +  ++++  F  I   H + V   M  +M+ +V
Sbjct:   63 LASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFISRQLKGLEDTKSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDLMSSIV 185
The following BLAST results are available for this feature:
BLAST of Vigun09g214900.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PDS5_YEAST3.384e-1533.33Sister chromatid cohesion protein PDS5 OS=Saccharo... [more]
PD5BB_XENLA5.203e-1533.33Sister chromatid cohesion protein PDS5 homolog B-B... [more]
PDS5A_DANRE3.977e-1429.05Sister chromatid cohesion protein PDS5 homolog A O... [more]
PD5AB_XENLA5.547e-1434.17Sister chromatid cohesion protein PDS5 homolog A-B... [more]
PDS5B_MOUSE1.126e-1331.71Sister chromatid cohesion protein PDS5 homolog B O... [more]
PDS5B_HUMAN1.206e-1331.71Sister chromatid cohesion protein PDS5 homolog B O... [more]
PDS5B_RAT1.248e-1331.71Sister chromatid cohesion protein PDS5 homolog B O... [more]
PDS5B_CHICK1.431e-1331.71Sister chromatid cohesion protein PDS5 homolog B O... [more]
PDS5A_CHICK1.543e-1330.12Sister chromatid cohesion protein PDS5 homolog A O... [more]
PD5BA_XENLA1.830e-1332.52Sister chromatid cohesion protein PDS5 homolog B-A... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002999Tudor domainSMARTSM00333TUDOR_7coord: 633..692
e-value: 2.8E-4
score: 30.2
NoneNo IPR availableGENE3D2.30.30.140coord: 633..681
e-value: 9.4E-10
score: 40.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 458..485
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..446
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 808..838
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 689..884
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 756..784
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 785..807
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 601..632
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 534..553
NoneNo IPR availableCDDcd04508TUDORcoord: 638..680
e-value: 5.83023E-4
score: 36.422
NoneNo IPR availableSUPERFAMILY63748Tudor/PWWP/MBTcoord: 635..676
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 49..243

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g214900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g214900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g214900.1; organism=Vigna unguiculata; type=mRNA; length=3567bp
TTATTCTATATGGGAATAGGAAAGTAGTAAATGCTAGCTTTTTGGTAGTG
AAAATATAATTCATGAGAAATCTTCCTCTCCATTTTTTTAAAACGAACTT
TACTCTCTCTCTTTAGTTTTTCTTTTATCTGTCACACACTCTCTCTTTTC
TGTTTCTCATTTTTGGCAAGGAAAAGGGGGAAAGGAAACAAAAATAATTG
AAAAAACCCTAATTTCCTTGTTCCATCCACATCTACTCTCAAATCGGGTT
GGATTGGAACCGTTTCATGGACCAAATGAAGTGAAGCAGCCGGAGTCTGT
AGAAGATCAAGAGGAAGAGACGGAAAACGACACAACCAATGGCGACTACA
GATAAAGAATTGGAAGAGCAACTTCTCGAGGCCGGTAACAAACTTGCAGA
TCCTCCGTCATCCGTGGAGGAGCTTCTCTCACTTCTAGACCAAGTAGAGA
GCTTCCTATCAAAGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCA
CTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACTTCTGAGGCACTC
AGATGATGATGTCAAAGTCGCAGTTGCCTCTTGCATCAGTGAAATAACAA
GAATCACTGCACCTGATGCTCCTTATGATGATGATCAAATGAAGGAGGTC
TTTCAATTAATAGTATCTTCATTTGAAAATCTACATGATACGTTAAGTCG
ATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTCAGAT
CATGTGTTGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGAGATG
TTTCAGCATTTCTTTAAAGCAATAAGGGAATATCATCCAGAAAATGTTTT
TTCATCCATGGAAACAATTATGACCCTTGTTGTAGAGGAAAGTGAAGATA
TATCCTTAGACCTGCTGTCTACACTTCTGACCAGAGTTAAAAAAGATGAC
GAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAGGGTCCTTGAAAG
TTGTGCTACCAAGCTTAAACCCTATTTGGTTCAAGCAGTGAAATCTTTGG
GTGTACCTATGGGTGATTATAGTTTGGTACTTTCTTCAATTTGCCAAGAC
ACATCTGATGCCTTGGAGAAAAATGATACATGTGTTACAAGTGAGCACAC
GGAAGATAAGGGCGAGTTGGCAAAACGACCACGTGAGGAGTCAGCACATG
TAGTTGAAAAGGATCCAAGGGAAGTTAGTCCCTCTCATCAAGAAAATCCT
GATGTGAATATATCTCCAAAGTCAGTCATGAGCAATGGTGTTGCATGCGT
TGAAGAAGGTACTGCTTTAACTAATTCCAAGTCCGTTAAAAAGCAAGAGG
AAGCTGAATGCTCTAATCACTCTGAAGGCTTGAATATATCTGGTCATGAG
GTGTGTAATGATGTAGACTCTGAAAAAGTTGACAATAGTAAAAGTAAGCC
AGAACAATCTACCAAGCGACGGCGGAAGAAATCAAGCTCTGCAACTAAAT
CTGCAAAGCTTTCCAAGAGTCAAGTTGCTGCTAGTGATAAGGAAACTGAG
AAAAAGCTCGACAATGAAAACAACAGCAAGAAAGTACCCAGTTCCCCTCA
TGAGGACCATTTTGTTGAAGCAGCAGGACCTTCAGAGAATGACAAAGAAG
TTGATGCTAAGACTTTATCACCAAAGGCAGACAACAATGAATCTGAAGTT
GCTTCTCCACCAAGTGAGAGCCTCCATGATGAAAATCGATCGAAGAAACT
TGGACGAACAAAAAGGAAAGATGGCCCTGTTAAAGACGTGGCTGGAGAGG
ATGTTTCTAAGGTTTCTGGAGGAGGAGCTAGTGATTCAGAAGCCAAACCT
ACGAGGCGGTCAATGAAAAAGGCACTTGGTCAGAACTCTGTGAAAAAGGC
TAGTGTTGTAGATTCAGTTAAAAAAGGAAGTGGTGCGGCAAATGATGCAG
ATGCTAAGAAGCATTCAGCGAAGAAATTAGATGAAAACAAAAAGGGTAGT
GGTGGGTCCTCTTCAAAGCAGATTGGGGACAAGAAAAAGGGAGGGAGGAC
GAAAGCTAACCCTGAAACAGATCTAGCAAAATCAACTGCTATGGATGTGG
ACAAGGAAGTGGTTTCTTCTCCAAGGCCTGGTACAAAATCAACTAAAGAT
GAAAGTTCAGAGGAGACTCCCAAGGCAAATGTGAAAAGGAAACGTGGTTC
AGGAAAAGAAAATGAGTCTGATGTGAAGGATTATGGTGAAAACCTTGTTG
GTTTACGAGTCAAAGTTTGGTGGCCTGAGGATCGTGAGTTTTACAAAGGT
GTTATTCATTCTTTTTATTCTGGGAAAAAGAAGCACAAGGTCTTGTACGA
TGATGGTGATGAAGAAACATTAAATCTCTTGAAGGAAAAGTGGAAGTTAA
TTGAAGCTGGCTCAGATGCAGATGAGGAGGGACAAAGTGATCGTGAAAGT
CTTGATGCTTCCACTGATATGCCACCGAAGAAGAAAGGGAAAACCAGTGC
TGGTGAATCAACCAAGCAAGGAAAGGTGGATGCTTCTTCCAAAAGCGGTG
GAGCAGCAGCATCCAGTAGATCAAAGGGTGCATCCATGAAGTCTAGCCAA
AAGTCCAAAGATGGGAACAAATCCAAAGATTCCAAGACTATAAGCAAATC
TGAGGACCGAGTCAGTAGAAAATCTAAGGACAGCACTCCTAAAAGTGGAA
ACAGTAAAACTGTTGCTGCAGCTGCTAAGAAAATGAGTAATAAATCCAAA
AACTCTGATACTTCCAAGGCTGGCGAATCAAAGGATGATGACACTAGCAA
GCCAAAATCTGCTGCCAAGTCTAAGCAAGAAACTCCAAAAAGTGGGAAAT
CCAAGCAAGAAACCTTGAAGTCTGCCATTTCGAAAGGAAAACCTCTTAAA
GGTGGTGGAAAGAGTGATGTTAATGGTACTGGCAAGGTGAAATCTTCTTT
ACTGAAGAGAAAACATGCGGAGGATGAAAACTCAGATGCTTAATCAAAGT
TGAAAATGCCAAGGGCATGACTTAAAGATCGTCAAAGGCAGTGAGTTAAT
GAGGGGAAAGAAGCACCAAAGAACATAGAAGTGGGTATTTATTCTCGCTG
TTTATTCCTTAACTGTATCAGGTTAGCTGTTCATCATTTTGTGGTAATCA
ATCTCGTTGTTGGTAAGTATTATTTTCTCATGTTAATTAGCTAGGCTAGT
TTAGTTGTAGTATGGGCTAGTATCCTTAATCACTTTTACATTTGTTTCTA
GACTAGAGGGGATGTTATTTTTATGGCAACACTTGAAAATATTTGGCTAG
CAACCTTCATTTCAAGAATGCTTTGGCACACTACCTGATCTCACGGTTGA
CCACTTACCACATAATTAACGTTTTTTGCATTGGTCGGTGCTGAGCTGTG
GTTGTGTTGTTTTTTTGTTGAGACAACACGTACAACATAATTGATGTGGT
GGAAGCTAATGTTTGTACTGTTTATTTGGTTTCAATTTGTATCTCTGAGC
GTTCCACATTTTAGTTTGTGAATACTGCATTACATCACTTTTCCCCCTTT
CGGTATTTTAAACTCCA
back to top

protein sequence of Vigun09g214900.1_Vu_IT97K-499-35_v1.1

>Vigun09g214900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g214900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g214900.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=885bp
MATTDKELEEQLLEAGNKLADPPSSVEELLSLLDQVESFLSKVEQSPSNS
MQIALSPSLKALIADKLLRHSDDDVKVAVASCISEITRITAPDAPYDDDQ
MKEVFQLIVSSFENLHDTLSRSYAKRTSILETVAKVRSCVVMLDLECDAL
ILEMFQHFFKAIREYHPENVFSSMETIMTLVVEESEDISLDLLSTLLTRV
KKDDEEAFPIAKKLGERVLESCATKLKPYLVQAVKSLGVPMGDYSLVLSS
ICQDTSDALEKNDTCVTSEHTEDKGELAKRPREESAHVVEKDPREVSPSH
QENPDVNISPKSVMSNGVACVEEGTALTNSKSVKKQEEAECSNHSEGLNI
SGHEVCNDVDSEKVDNSKSKPEQSTKRRRKKSSSATKSAKLSKSQVAASD
KETEKKLDNENNSKKVPSSPHEDHFVEAAGPSENDKEVDAKTLSPKADNN
ESEVASPPSESLHDENRSKKLGRTKRKDGPVKDVAGEDVSKVSGGGASDS
EAKPTRRSMKKALGQNSVKKASVVDSVKKGSGAANDADAKKHSAKKLDEN
KKGSGGSSSKQIGDKKKGGRTKANPETDLAKSTAMDVDKEVVSSPRPGTK
STKDESSEETPKANVKRKRGSGKENESDVKDYGENLVGLRVKVWWPEDRE
FYKGVIHSFYSGKKKHKVLYDDGDEETLNLLKEKWKLIEAGSDADEEGQS
DRESLDASTDMPPKKKGKTSAGESTKQGKVDASSKSGGAAASSRSKGASM
KSSQKSKDGNKSKDSKTISKSEDRVSRKSKDSTPKSGNSKTVAAAAKKMS
NKSKNSDTSKAGESKDDDTSKPKSAAKSKQETPKSGKSKQETLKSAISKG
KPLKGGGKSDVNGTGKVKSSLLKRKHAEDENSDA*
back to top

mRNA from alignment at Vu09:38926765..38938306+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g214900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g214900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g214900.1; organism=Vigna unguiculata; type=mRNA; length=11542bp; location=Sequence derived from: Vu09:38926765..38938306+ (Vigna unguiculata
TTATTCTATATGGGAATAGGAAAGTAGTAAATGCTAGCTTTTTGGTAGTG
AAAATATAATTCATGAGAAATCTTCCTCTCCATTTTTTTAAAACGAACTT
TACTCTCTCTCTTTAGTTTTTCTTTTATCTGTCACACACTCTCTCTTTTC
TGTTTCTCATTTTTGGCAAGGAAAAGGGGGAAAGGAAACAAAAATAATTG
AAAAAACCCTAATTTCCTTGTTCCATCCACATCTACTCTCAAATCGGGTT
GGATTGGAACCGTTTCATGGACCAAATGAAGTGAAGCAGCCGGAGTCTGT
AGAAGATCAAGAGGAAGAGACGGAAAACGACACAACCAATGGCGACTACA
GATAAAGAATTGGAAGAGCAACTTCTCGAGGCCGGTAACAAACTTGCAGA
TCCTCCGTCATCCGTGGAGGAGCTTCTCTCACTTCTAGACGTAATAACAT
ATCTTCGCTTTCAAAGTTATTTTAACACTTGCTTGTGATATTCGAATTTG
TTTTGTTTTTTATTGTTTGATGCATGTAGTTAACATTTTTCTTCCCTGCA
ATCTGGCCGCGGAGAATGTTTGACTTTGACGTTTGTGTGAGATTTTGATA
AGAAGGACGAGTGCATGGAATGTTTGATTCGAAATTGTTATCTTCATACC
TAGATTGTCTTGGCGGTGAAGGGATAAATGTTATGGCCTATGATTTAATA
GATATACCAATATAAGATAATATTATATGGTGTATATTATATATTATCTC
CTCTTCTGCGCATCTTAAAAAGTAATGGAGTTGTTCTAATTGGTAAGTGA
TGATGGGTAATAGAATTAATATGCTGGAATTAATTACAATCAATCTTCTT
TATTGTTTGGTTATGGATGTATGAAATAAATGGTGGTGAAGAAATTGAAT
TAGGTCTTGGATTTGTCTGGTTCAGTTTTTGTCAATTGATGGAATTATTG
ATTGTTGATTATTGGGTGTGGTGAGATTGGGAAGGAGGGTTTGAGTGGGG
CCAACAGTGACGTTAGGTCTGTGGGAGCACTGGTTTGGTGCTAGTGGTTG
TGGCATAGGGGTTGCACTCGCTTCACCATGGCAATGGTTGTCCTCCTCTG
GATATTATTGGAGCATCCTGCAATTTTCTTCATGTAAACCAGATCCAGGA
AGTCTCACCCTCCACCTTTTTGTTAATTTGATGTTGAGTATCTTGAAATT
TTTGGCTTGTTGCTTTAATTTGGGATGTTTGTGACAAGGGCATGAAAGGT
ATCCATGTGGGTTTGGAGATTTCATGTGGTACTGGCTTGGGCTACTGGTG
ACCAGTGATTCTGAGTGAAATTTAATAATGACAGATGATTTGCAAGGAGA
ATGTGTTTCAACAACACCCGCCAAGATCACAGTTTCAAATATATTATTTT
TGACAATATCCAGTGACTAATTTTTCCAGTTTCCTTCCGTGCCTCCCTTT
CCTGATCTTCACCAGACTAAAACCCATAAATCTACTATTCTCACTGGTAT
CTCTCAGAGCTGTCTTTATACACGTCTACTCCACCTTAGTCTGTTTTTCT
CACCTTTTCCTTAATTGGTGCCATACTAATCACTCTCATGTAATCATTTT
GTGTTTTGTCTTTTCTTGTGTGACTTCATATCCATCATAACATTCTCATT
TATGCCACTCTGACTTTTTTCTCTTGCTGTTTTTATAAAGTCCAACATTC
ATGACCATAGAGCATTGTCGGGACATACAGTAGTACGAAAAAAGTTGTAC
TTGAGTTCTTAGGTGCTCTATTTAGTCACAAATAACCTGTCTGTATACTA
ACATCCTAGGTGTCACGTTCCAGTTTTAATCACGCCATCCTCTTTCTTTG
TATAAGCCTTTTTCTTTGTATTTTGGTACATTTTCATCAACCTCTGTAGA
AGATAAATAAATTGCATCTATTGTAGACCTTCCTAGTAAATAACTGAACC
ATATTTTCATAGTGTTACTCGTATGTTTTATACCTCTATAATTAGCACAA
TTATGAATATATCCTTTAGTCTTGAATATAGGGCCAAAGCGCTCTTCCTC
CACTCATCTGGCATCTTCATATATATCAAAATCTTGTTGAAAGCTTAGTG
AGCAAAATGATACCTTGTTTTCCCACATTCAAAACTTCAACATGTGATCA
AACAACTATGCCATTATCTATTCCTTTTATGGATCTCTGTTTTTCTGATT
CAAATTTTTTAGTTTCTGTTCATTTTCTTATATTTCTAGTTCTTCTGTGG
TGAGAGTCAATCCTTGTTTCTATTGAAAACGTTATAAAATTAATTCCCTC
GTTGTGGTTTGACCAAACTTTACCTGATACATCTTACATTCTTACTTAAT
CCAAATATCTTGTATAACTCTTCAAAAAGCTTTTAGGTGGTTCTTCATAC
ACTGTTTTATCTCATTCCTTGCATTTTATACTTTTTCTAATTTTCAGTAC
TGTTGCACCTATGTAAGATTTTAAAGCATTTGTTCTTTACCATGACTTTG
ACATTTTCATTCCAGCACCAAAATTCTGTATCTCTTGAACCTAAATCTCT
CGTTCCACCCAAATTTATTTTTGCAACCTTCCTTATTTTCTTAGACATTT
CATCCCACTTGACGATAGCATTACCAAGTGATTCCTAATTTCCTTCCTCC
GGTGGCTTTTTTTTAAATGTTGAAATAACCATTTCCCTTAAGTTGGCACC
TATTGATACTTTTTTGACTGTGTAGTAAGGCTCCCACTTGGAATCACCTA
ATCTTTATGTTGTGAAGGATCAACATTGTTTATCCTCCTCACCTAGGCAC
TTTTTACCTTTGCAGGTGAGTAGAGAATTGTTCTGATTTAAAAAATGTCT
CTGAACTCAGGCAACATGTAGAAAGGTTGATGTTATAGTTTTAATCATGG
TAATAAGAATTGAGTGATACATTATTCATATTGTATGATACCATTCTCTA
CACCATGGTATGATTGCTGTAACACTTGATTTTTGCTCCTGGATCTATCT
TGTATCATTCAAATCTCGTTTGAATTGTGCCTTGAATCGTGGGAGAGAAA
CCGCATTCAGGTTGCACTCAAACAGGTCTCTGAAATGGGTTAGTTCGCAT
GACCCCTGTTTGAAAAAACCCTAATTTTGCTTTAATCTTTTGCGAGAATC
AGCATGGGAAGAGATGTAAAATGGTTGTTCCTTTCCATCCAGCCATGGCC
ACTGTCTTTTCCTCATGTCTACTTGGTGGTCTCTTTAATGTTCCTTTCTA
CTCAAAAACTCGATTTTCTGCTGGTCCTTTACCTTTCATTACATGTGCTA
CTTCTGAGTGAGTTTTCTGCTGTACACCTGCTTTATAGAAATAGATAAAA
AAAAGGGAGCCTGATATTACTTAGGGCTATTGTGAAACTCTTCCTACTAA
TAGACTACAAGTAAAATGTAGATTTTGTTCTCATGCTTCTTGCGGTGGCA
TAGCAAGGATGAAGCATTATCTTATTGGAACAAACAAAGATGTTATTCCT
TGTCCTAGTGTTTGAGATGAAGTGAAGGAAACAATTGTGAAGCTGCTGAA
ATGTAAAGAAAACATTAGTAAGACTAGCTGTCACATGTGTTGTTACTTTT
ACATTAAACTGTATTAAGCAACAAAAAAAATGCTACTAAAGTTGACATGC
TACTAAAGTTGAGGCTAAGCAAGTGATGAAGTAGATTTTGAAGATCAATC
ACATACTTCCTAAAATGTGTGATTCCACTTGTAAAAGTTGAGGTTTGTAG
ATGTTGGTTCAAAACCAGCCATGCCATCCATTTATGGAGCAATGGAATGG
ATTGAGCTGACGAGCAAATTGCTGAATTCTATAAGCAAGAAACAAGGTAT
AAAAAAGTGTGGAAAATTGTTGACATTACATGGAATTTAAAACTACATAG
GCTTCTCCATGCAGCAGCCTATTATCTCAATCCTAGGTAAGCTAGTTACA
TATGTCCTACTAAGTACCACTTTCTTCCTTGTTCTCATTAACTTATTTTT
ATAATGGTAGATATCATTATGACAACACTTTCAATCCACATAGTGAGGTG
TTGGTTGGTTTATGTGAAACATTTCAAAGAATGGCTTTGGCTGCAAAAAC
AGGAATTGCAATTAATCAACAACTTGAAAAGTTCAAGGGAGTAAAGGGGC
TTTTTGGAATGGACATTGCAATAGATACTAGAAACAATGAACAACCTGAT
AATTGAATTACTCATTACCATTTGTATATGACTTATACATTTTTAATTAC
ATTATAATTGCAAAAGATGGCCATGAAAATTTTGAGCCTCACATGTGGTG
CAACAGGGTGTGAAAGGAATTTGAGCATTTTTTACCTACTGCATAATAAT
AGAACAAATAGATAGGAACAATAGCGATTAAATGGTGTGGTGTATGTGAA
GGATGGTCTTCAACTTGAGATGAGACAAAAAGAATAGTGAAGGGAAGGGG
GAAGCCTATGATCCCATATGTTTGCCGGATGATGAAGGGATCACTGGAAA
ATAAAATTCCTTGCTTGCCTTTTCATTCCTCGTGGATGAATGTAGATGAG
TATTTTGATGTTGAAGAGGGAGCTCCAAGCAAAAATAGGAAGTGAGGTAG
TTATTTATACTTAGTTTTAGAAATTGGAACTTCAACGCTCAAACTATAAC
TTTTTTGTTTTTCATTTGCTCATATATATAGGTCCTAAAAACTTAAACGC
CAAGACCAATAAAAATGGAAAATCCATAGTAGGAGATGAGGAAGAAGAAC
TTTTCACAGAAGATGAAGATGACTTGAGTTATGTAGATCTTGGAGAGGAA
GAGGATTAAATATGAATGATTTGGATAGAATCTTTTTTTTGAGGCTGCTT
AGTACATGTAGCAATACAACAACCATAGTCTGAGGTAGCTATGCAGTAGC
AACAACAAATTTTTTGAATGACTATAATGCAAAAGTTGTTAGTAGCATAT
AATCATTGTTATAGGAATTTTATGCTGCAACAACAGTGTTTTTTTGGAGG
TTATGTTGCTGAAATTGTGCAGTGTAAATATACATACAACTACTATTTTT
TTAGTGGTTGTTATTAATTGTATATTTACTTGGTTATATGTCTTATATTT
AAGTGTGACTCATTTTTTAATGTTTATGAATCTTATGAATCATGGTATAA
AATGATTCAGAATTCAAAATATAACCTCTCCATACATAATTTTGTATCTC
AATTCATATGCCCATGATTTATTATCTAATAAAAATTAAAGTATACACGA
TTTTGAACTCTGAAGTGAGGTGAAGGTGAACAATTGTTTGATTATGTCTA
AAACATAGTCCTGACTAAATGGTTGGTCAAAGTACTAAATACATTTTTGT
GATTTTACATCTTTTCTCCCTTGCCATGCAGCAAGTAGAGAGCTTCCTAT
CAAAGGTTGAACAGTCACCTTCAAACTCTATGCAAATTGCACTCTCTCCA
TCATTGAAAGCATTGATTGCAGACAAACTTCTGAGGCACTCAGATGATGA
TGTCAAAGTCGCAGTTGCCTCTTGCATCAGTGAAATAACAAGAATCACTG
CACCTGATGCTCCTTATGATGATGATCAAATGAAGGTGTGCATAATTTGT
TCTGCTACAGTATACAAATGGACTTGTGAACTTACTTTTTACAAATATAT
CTGTAAAACTTTGATCAATCTGAATTTCACCAATGACATTTCTTACAGGA
GGTCTTTCAATTAATAGTATCTTCATTTGAAAATCTACATGATACGTTAA
GTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTGCAAAAGTC
AGATCATGTGTTGTAATGCTGGATCTTGAATGTGATGCCCTGATTTTGGA
GATGTTTCAGCATTTCTTTAAAGCAATAAGGTACCCTTTATGGTCAAGTT
TGGCTTCATCATGGCTTCTGTTGAAATAATTATTAAATTTATGTTAGAGT
AATTATTAAGTCTAAAATAGGGAGTTGTGTGTTGGGAACTACTTCCAGCT
GTATTTATAAATCTAGTGCACTCTATGAGTTGTACCTAGGTATTTAGGGT
AGTCTTTTGATCTTTCATCTTCCATTGTATCAGTTTTTATCATTATAAAT
AGAAGGTTATGAGAGGGATCTATTAAGACCCTCCAATTGTGTATTATCCT
TTTATTTTCACAGCTTCAAATACTTTGTCATCTGTAATTCATGGTTTAAT
TATTCTGATTTTTTACTATTTAGTCTGTTTTAACTATATTAATGTGTTTA
TTTTTTACTGCTTATTATCTTGTAAACACATATTAGTGTGATTACTGGTT
ACTTCCTTTGATATAATTTTAGAAAAATACTTTAAATTTGACTTGGTATA
CATATTTTACCTCTGGTGGATACTGACAGTCTGATACACATATATTATGA
CTCTCCCAATTAGAACTTGACTGGTTTTTATCTTCGGTCTCCTTGTGTTC
ATGTTTTCTTTGGATAATTAAAAAGATTGTTTAAATTTTGCTGCAATTAT
GCTTTTTCAATAACTTTTTAATGAGATTAAAGACCAACTTAAATATGACA
AATAAGCCATGTAGCTGTACGACCTAGTTGTTTATGTATTACTAGTGCAT
ATTTTTGGATTTTTGGAAACTCTTAATGTGGGGATGTACACCATAGTTCT
AATCATGTCTATTTGAAAATTTCAGGGAATATCATCCAGAAAATGTTTTT
TCATCCATGGAAACAATTATGACCCTTGTTGTAGAGGAAAGTGAAGATAT
ATCCTTAGACCTGCTGTCTACACTTCTGACCAGAGTTAAAAAAGATGACG
AGGTTGTAGTTTGGTAGTTTCATTTTCACTTTCATACCTTTTAGTTGATT
GCAATTTTGATGTTGAACATTGCTTTTGTTCGAATTTTATTATTGGTTTG
ACATTGATAATCATTGTGATATAGGAAGCTTTTCCAATTGCCAAAAAATT
GGGTGAGAGGGTCCTTGAAAGTTGTGCTACCAAGCTTAAACCCTATTTGG
TTCAAGCAGTGAAATCTTTGGGTGTACCTATGGGTGATTATAGTTTGGTA
CTTTCTTCAATTTGCCAAGACACATCTGATGCCTTGGAGAAAAATGATAC
ATGTGTTACAAGTGAGCACACGGTAAGTTTTCTGTTGGTCATTTGTCTAT
TAATATTTGAAACATTTCATGATAAGAGAATCCTGAAATTTTACTTTTGT
CATATTGATTTGTTTCAGGAAGATAAGGGCGAGTTGGCAAAACGACCACG
TGAGGAGTCAGCACATGTATGGCCCCACTTAAATGCTTGTTTTTTACATA
TCTTGTGGCTCTGAAGTTTTGTCATCCGAAATTGATCTCTGGAACATGTT
GATTGTGCTTTTATCAGGTAGTTGAAAAGGATCCAAGGGAAGTTAGTCCC
TCTCATCAAGAAAATCCTGATGTGAATATATCTCCAAAGTCAGTCATGAG
CAATGGTGTTGCATGCGTTGAAGAAGGTACTGCTTTAACTAATTCCAAGT
CCGTTAAAAAGCAAGAGGAAGCTGAATGCTCTAATCACTCTGAAGGCTTG
AATATATCTGGTCATGAGGTGTGTAATGATGTAGACTCTGAAAAAGTTGA
CAATAGTAAAAGTAAGCCAGAACAATCTACCAAGCGACGGCGGAAGAAAT
CAAGCTCTGCAACTAAATCTGCAAAGCTTTCCAAGAGTCAAGTTGCTGCT
AGTGATAAGGAAACTGAGAAAAAGCTCGACAATGAAAACAACAGCAAGAA
AGTACCCAGTTCCCCTCATGAGGACCATTTTGTTGAAGCAGCAGGACCTT
CAGAGAATGACAAAGAAGTTGATGCTAAGACTTTATCACCAAAGGCAGAC
AACAATGAATCTGAAGTTGCTTCTCCACCAAGTGAGAGCCTCCATGATGA
AAATCGATCGAAGAAACTTGGACGAACAAAAAGGAAAGATGGCCCTGTTA
AAGACGTGGCTGGAGAGGATGTTTCTAAGGTTTCTGGAGGAGGAGCTAGT
GATTCAGAAGCCAAACCTACGAGGCGGTCAATGAAAAAGGCACTTGGTCA
GAACTCTGTGAAAAAGGCTAGTGTTGTAGATTCAGTTAAAAAAGGAAGTG
GTGCGGCAAATGATGCAGATGCTAAGAAGCATTCAGCGAAGAAATTAGAT
GAAAACAAAAAGGGTAGTGGTGGGTCCTCTTCAAAGCAGATTGGGGACAA
GAAAAAGGGAGGGAGGACGAAAGCTAACCCTGAAACAGATCTAGCAAAAT
CAACTGCTATGGATGTGGACAAGGTATTTTTCACGCTTTATACGTGTTTG
CTTCTGTATATTATCATTATTGCTGCATGTTTTATTCTGCTTTGTTTTTG
TCAAGTAAACAAATCAATTTTAATTATGTAGGAAGTGGTTTCTTCTCCAA
GGCCTGGTACAAAATCAACTAAAGATGAAAGTTCAGAGGAGACTCCCAAG
GCAAATGTGAAAAGGAAACGTGGTTCAGGAAAAGAAAATGTATGTCCTTT
TCTCTGAATTTTTAAATTATGATACTGGAACTTCCTTGATATATTTGTAA
GGGAACCTTTGTTCTGGGAAAATCCTTTATGCAGCTTGGTCTTGCTAATT
TAAAAAGTTTCATTGTATTCTTGCTTTGATTGGTAATTATCTTTTTCCTG
TACCAGGAGTCTGATGTGAAGGATTATGGTGAAAACCTTGTTGGTTTACG
AGTCAAAGTTTGGTGGCCTGAGGATCGTGAGTAAGTACTTAGCATGACTT
CCATTTTGACTTGCTGTCACTGGAAATTTCAGTTAATAAGTTGCCAGGAA
GTGCTTGTTATTTGGCATTTACTTTGAAATTGTAATCTCTAGTTCTTTTA
TGGTTGTCTAAGCTGGCCAATATTTGTTTTTACATATCTTAATCTGGACT
AATGTTGCTTTGTGTTCATGATGTTTGCATTACAGTCGCGTTTATTACAT
GCATGATTTTGTAAACTATTCTGTTGAAGTTATTGTGGTCTTGATGGTTT
GTGTTCTAGATTTTCTTTACTAGCTTAAATGTGTTTGCGTGTGATTTACT
TGATCTGTGTGAAACTGTTTTGTAATAATTAAACTAGGGTTTACATTTGA
TGTGAAATAGTGAGGGAATGTGTTTTTATAAAACTAGGGTATATCATGCA
CATTATGTTTATGATCAGATTGCCGTGCTTTTTTATATAATAGAAATATT
TGCTACAAATTTTCACAGATATCTCACTTGTTACAGGTTTTACAAAGGTG
TTATTCATTCTTTTTATTCTGGGAAAAAGAAGCACAAGGTGATTTGACAG
TTTATTAAGTCATCTCTCTATCCTCCCCCGTTCCATTATTGATATTAAAC
TTTGTATTCTTTTTGTTCTTTTGTGTTGCTGTGCCCATGACAGAATTCGG
AACTTGTCCCTCATATTTTATCTTCTGACATATGTTCTCTATTTTAGGTC
TTGTACGATGATGGTGATGAAGAAACATTAAATCTCTTGAAGGAAAAGTG
GAAGTTAATTGAAGCTGGCTCAGATGCAGATGAGGTTGGTCTACGACATT
TCTTTATACACCAAATTTTCTCTGCACGTAAATTAATAGCAATTATTTCT
CTTGACAGGAGGGACAAAGTGATCGTGAAAGTCTTGATGCTTCCACTGAT
ATGTATGTTCTATGGTTAATGTCATTTTTTGTAGATACATCTTTTATTTG
TATTATCCTATATTTTTTACACATGTTTTTATTGGGTGTGCATATATTGC
GATGTTGCCCTTTTGCAGAAATTCTGTGCATCTGTGTGTTCTTGGTTTAG
TTTTCAAAGAATGCTACCATGGTATATGTAACATGAAAAAATCAGCGTGC
TCTTTTTGCAAATATGTATTTTTGTGAATGATGATTTGCCGAGCTTTAGA
TATGATTTGACCCCCATGGCATAATTCGGAACTTATTCCCCTACTCCTTG
TCGGTTCAGGGTAGGCATTTTTTTGTGTTGTATATTTGATGTTCCCATTT
TGTCCTGTTGAGTGCTAAAACAGATATTTTAAAAAATAAAAGTGTTTGTA
TCCTTTTATTTCACTAAGTTTTTTGACAGATATATGCCCATCTGCTCACT
AATATGTATAGATGGAAAAGTGGTCAATTGACATGGGCATTTGTATACCT
CGTGAAGCAATTAGGCTATGTGCTGCTCTGGTTTGATTTTTATTAATTAA
GAATATGTCAGTAGATTGTTTAATGTTTCCCCTCTTTTTGAAGGATTCAA
ATGAACTTGTGCTGTTTATCGCTGTATTTTTTTTTTCTTCGATGCTGTCG
CACAGTGTGGTTTCCATCTGTTTCTTTATTTGGTCTTGTTCACATTGCAT
TGTTCTATGATTCTATCTATTCAGGCCACCGAAGAAGAAAGGGAAAACCA
GTGCTGGTGAATCAACCAAGCAAGGAAAGGTGGATGCTTCTTCCAAAAGG
TTTGTGAATATCAAATAATCTATTCCATTTCCACCTTTTTTACTACTAAA
TTTTTTACTTCAATTTGTAGCGGTGGAGCAGCAGCATCCAGTAGATCAAA
GGGTGCATCCATGAAGTCTAGCCAAAAGTCCAAAGATGGGAACAAATCCA
AAGATTCCAAGACTATAAGCAAATCTGAGGACCGAGTCAGTAGAAAATCT
AAGGACAGCACTCCTAAAAGTGGAAACAGTAAAACTGTTGCTGCAGCTGC
TAAGAAAATGAGTAATAAATCCAAAAACTCTGATACTTCCAAGGCTGGCG
AATCAAAGGATGATGACACTAGCAAGCCAAAATCTGCTGCCAAGTCTAAG
CAAGAAACTCCAAAAAGTGGGAAATCCAAGCAAGAAACCTTGAAGTCTGC
CATTTCGAAAGGAAAACCTCTTAAAGGTGGTGGAAAGAGTGATGTTAATG
GTACTGGCAAGGTGAAATCTTCTTTACTGAAGAGAAAACATGCGGAGGAT
GAAAACTCAGATGCTTAATCAAAGTTGAAAATGCCAAGGGCATGACTTAA
AGATCGTCAAAGGCAGTGAGTTAATGAGGGGAAAGAAGCACCAAAGAACA
TAGAAGTGGGTATTTATTCTCGCTGTTTATTCCTTAACTGTATCAGGTTA
GCTGTTCATCATTTTGTGGTAATCAATCTCGTTGTTGGTAAGTATTATTT
TCTCATGTTAATTAGCTAGGCTAGTTTAGTTGTAGTATGGGCTAGTATCC
TTAATCACTTTTACATTTGTTTCTAGACTAGAGGGGATGTTATTTTTATG
GCAACACTTGAAAATATTTGGCTAGCAACCTTCATTTCAAGAATGCTTTG
GCACACTACCTGATCTCACGGTTGACCACTTACCACATAATTAACGTTTT
TTGCATTGGTCGGTGCTGAGCTGTGGTTGTGTTGTTTTTTTGTTGAGACA
ACACGTACAACATAATTGATGTGGTGGAAGCTAATGTTTGTACTGTTTAT
TTGGTTTCAATTTGTATCTCTGAGCGTTCCACATTTTAGTTTGTGAATAC
TGCATTACATCACTTTTCCCCCTTTCGGTATTTTAAACTCCA
back to top

Coding sequence (CDS) from alignment at Vu09:38926765..38938306+

>Vigun09g214900.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g214900.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g214900.1; organism=Vigna unguiculata; type=CDS; length=2655bp; location=Sequence derived from: Vu09:38926765..38938306+ (Vigna unguiculata
ATGGCGACTACAGATAAAGAATTGGAAGAGCAACTTCTCGAGGCCGGTAA
CAAACTTGCAGATCCTCCGTCATCCGTGGAGGAGCTTCTCTCACTTCTAG
ACCAAGTAGAGAGCTTCCTATCAAAGGTTGAACAGTCACCTTCAAACTCT
ATGCAAATTGCACTCTCTCCATCATTGAAAGCATTGATTGCAGACAAACT
TCTGAGGCACTCAGATGATGATGTCAAAGTCGCAGTTGCCTCTTGCATCA
GTGAAATAACAAGAATCACTGCACCTGATGCTCCTTATGATGATGATCAA
ATGAAGGAGGTCTTTCAATTAATAGTATCTTCATTTGAAAATCTACATGA
TACGTTAAGTCGATCATATGCAAAGAGGACCTCAATTCTTGAAACTGTTG
CAAAAGTCAGATCATGTGTTGTAATGCTGGATCTTGAATGTGATGCCCTG
ATTTTGGAGATGTTTCAGCATTTCTTTAAAGCAATAAGGGAATATCATCC
AGAAAATGTTTTTTCATCCATGGAAACAATTATGACCCTTGTTGTAGAGG
AAAGTGAAGATATATCCTTAGACCTGCTGTCTACACTTCTGACCAGAGTT
AAAAAAGATGACGAGGAAGCTTTTCCAATTGCCAAAAAATTGGGTGAGAG
GGTCCTTGAAAGTTGTGCTACCAAGCTTAAACCCTATTTGGTTCAAGCAG
TGAAATCTTTGGGTGTACCTATGGGTGATTATAGTTTGGTACTTTCTTCA
ATTTGCCAAGACACATCTGATGCCTTGGAGAAAAATGATACATGTGTTAC
AAGTGAGCACACGGAAGATAAGGGCGAGTTGGCAAAACGACCACGTGAGG
AGTCAGCACATGTAGTTGAAAAGGATCCAAGGGAAGTTAGTCCCTCTCAT
CAAGAAAATCCTGATGTGAATATATCTCCAAAGTCAGTCATGAGCAATGG
TGTTGCATGCGTTGAAGAAGGTACTGCTTTAACTAATTCCAAGTCCGTTA
AAAAGCAAGAGGAAGCTGAATGCTCTAATCACTCTGAAGGCTTGAATATA
TCTGGTCATGAGGTGTGTAATGATGTAGACTCTGAAAAAGTTGACAATAG
TAAAAGTAAGCCAGAACAATCTACCAAGCGACGGCGGAAGAAATCAAGCT
CTGCAACTAAATCTGCAAAGCTTTCCAAGAGTCAAGTTGCTGCTAGTGAT
AAGGAAACTGAGAAAAAGCTCGACAATGAAAACAACAGCAAGAAAGTACC
CAGTTCCCCTCATGAGGACCATTTTGTTGAAGCAGCAGGACCTTCAGAGA
ATGACAAAGAAGTTGATGCTAAGACTTTATCACCAAAGGCAGACAACAAT
GAATCTGAAGTTGCTTCTCCACCAAGTGAGAGCCTCCATGATGAAAATCG
ATCGAAGAAACTTGGACGAACAAAAAGGAAAGATGGCCCTGTTAAAGACG
TGGCTGGAGAGGATGTTTCTAAGGTTTCTGGAGGAGGAGCTAGTGATTCA
GAAGCCAAACCTACGAGGCGGTCAATGAAAAAGGCACTTGGTCAGAACTC
TGTGAAAAAGGCTAGTGTTGTAGATTCAGTTAAAAAAGGAAGTGGTGCGG
CAAATGATGCAGATGCTAAGAAGCATTCAGCGAAGAAATTAGATGAAAAC
AAAAAGGGTAGTGGTGGGTCCTCTTCAAAGCAGATTGGGGACAAGAAAAA
GGGAGGGAGGACGAAAGCTAACCCTGAAACAGATCTAGCAAAATCAACTG
CTATGGATGTGGACAAGGAAGTGGTTTCTTCTCCAAGGCCTGGTACAAAA
TCAACTAAAGATGAAAGTTCAGAGGAGACTCCCAAGGCAAATGTGAAAAG
GAAACGTGGTTCAGGAAAAGAAAATGAGTCTGATGTGAAGGATTATGGTG
AAAACCTTGTTGGTTTACGAGTCAAAGTTTGGTGGCCTGAGGATCGTGAG
TTTTACAAAGGTGTTATTCATTCTTTTTATTCTGGGAAAAAGAAGCACAA
GGTCTTGTACGATGATGGTGATGAAGAAACATTAAATCTCTTGAAGGAAA
AGTGGAAGTTAATTGAAGCTGGCTCAGATGCAGATGAGGAGGGACAAAGT
GATCGTGAAAGTCTTGATGCTTCCACTGATATGCCACCGAAGAAGAAAGG
GAAAACCAGTGCTGGTGAATCAACCAAGCAAGGAAAGGTGGATGCTTCTT
CCAAAAGCGGTGGAGCAGCAGCATCCAGTAGATCAAAGGGTGCATCCATG
AAGTCTAGCCAAAAGTCCAAAGATGGGAACAAATCCAAAGATTCCAAGAC
TATAAGCAAATCTGAGGACCGAGTCAGTAGAAAATCTAAGGACAGCACTC
CTAAAAGTGGAAACAGTAAAACTGTTGCTGCAGCTGCTAAGAAAATGAGT
AATAAATCCAAAAACTCTGATACTTCCAAGGCTGGCGAATCAAAGGATGA
TGACACTAGCAAGCCAAAATCTGCTGCCAAGTCTAAGCAAGAAACTCCAA
AAAGTGGGAAATCCAAGCAAGAAACCTTGAAGTCTGCCATTTCGAAAGGA
AAACCTCTTAAAGGTGGTGGAAAGAGTGATGTTAATGGTACTGGCAAGGT
GAAATCTTCTTTACTGAAGAGAAAACATGCGGAGGATGAAAACTCAGATG
CTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002999Tudor
IPR016024ARM-type_fold