Vigun09g217700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g217700.1 vs. DB:Swiss
Match: GDU3_ARATH (Protein GLUTAMINE DUMPER 3 OS=Arabidopsis thaliana OX=3702 GN=GDU3 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 3.314e-13 Identity = 59/93 (63.44%), Postives = 71/93 (76.34%), Query Frame = 1 Query: 76 WHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKISGALQNEEN--GERNVEKLGDSE-NKESV--TVYEEKILVIMAGDEKPTFLATPKASSVS 339 WHSPVPYLFGGLAAMLGLIAFALLILACSYW++SG L EEN ER++E +GD + +K +V EK LVIMAG+ KPT+LATP + + Sbjct: 28 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSGYLDGEENQSRERDLE-VGDVKPDKTAVKPVALPEKFLVIMAGNVKPTYLATPSVKTCT 119
BLAST of Vigun09g217700.1 vs. DB:Swiss
Match: GDU4_ARATH (Protein GLUTAMINE DUMPER 4 OS=Arabidopsis thaliana OX=3702 GN=GDU4 PE=2 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 5.426e-13 Identity = 56/85 (65.88%), Postives = 65/85 (76.47%), Query Frame = 1 Query: 76 WHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKISGALQNEENGER-NVEKLGDSENKESVTVYEEKILVIMAGDEKPTFLATPKA 327 WHSPVPYLFGGLAAMLGLIAFALLILACSYW++S +++GER + EK S K + EEK+LVIMAGD+ P FLATP A Sbjct: 33 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLS--TSGDDSGERVDEEKESRSGVKAASAACEEKVLVIMAGDDLPRFLATPAA 115
BLAST of Vigun09g217700.1 vs. DB:Swiss
Match: GDU2_ARATH (Protein GLUTAMINE DUMPER 2 OS=Arabidopsis thaliana OX=3702 GN=GDU2 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.096e-12 Identity = 53/91 (58.24%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 76 WHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKISGALQNEENGERNVEKLGDSE-----NKESVTVYEEKILVIMAGDEKPTFLATPKASS 333 WHSPVPYLFGGLAAML LI ALLILACSYW++SG+ ER++E D++ NK T EK LVIMAGD +PT+LATP S Sbjct: 28 WHSPVPYLFGGLAAMLALICVALLILACSYWRLSGS------AERDLEAGDDAKPDNDTNKTKHTEMPEKFLVIMAGDVRPTYLATPATRS 112
BLAST of Vigun09g217700.1 vs. DB:Swiss
Match: GDU1_ARATH (Protein GLUTAMINE DUMPER 1 OS=Arabidopsis thaliana OX=3702 GN=GDU1 PE=1 SV=1) HSP 1 Score: 62.7734 bits (151), Expect = 8.182e-12 Identity = 54/83 (65.06%), Postives = 65/83 (78.31%), Query Frame = 1 Query: 76 WHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKISGALQNEENGER-NVEKLGDSENKESVTVYEEKILVIMAGDEKPTFLATP 321 WHSPVPYLFGGLAAMLGLIAFALLILACSYW++S + EE+G+ + EK S +K + YEEK LVIMAG++ P +LATP Sbjct: 30 WHSPVPYLFGGLAAMLGLIAFALLILACSYWRLSSS--GEEDGQNVDEEKESRSGDKAANGAYEEKFLVIMAGEDLPRYLATP 110
BLAST of Vigun09g217700.1 vs. DB:Swiss
Match: GDU5_ARATH (Protein GLUTAMINE DUMPER 5 OS=Arabidopsis thaliana OX=3702 GN=GDU5 PE=2 SV=2) HSP 1 Score: 61.2326 bits (147), Expect = 2.023e-11 Identity = 52/88 (59.09%), Postives = 62/88 (70.45%), Query Frame = 1 Query: 76 WHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKISGALQNEENGERNVEKLGDSENKESVTVYEEKILVIMAGDEKPTFLATPKASSVS 339 W +PVPYLFGGLAAMLGLIAFALL+LACSYW++S ++EE K +S K +EEKILVIMAG PTFLATP A+ + Sbjct: 28 WRTPVPYLFGGLAAMLGLIAFALLLLACSYWRLSRQTEDEE-------KQTESGEKVVAKAFEEKILVIMAGQNNPTFLATPVAAKIC 108 The following BLAST results are available for this feature:
BLAST of Vigun09g217700.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 5 Position : 0 Zoom : x 1
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17 Position : 0 Zoom : x 1
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g217700.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g217700.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g217700.1; organism=Vigna unguiculata; type=mRNA; length=474bpback to top protein sequence of Vigun09g217700.1_Vu_IT97K-499-35_v1.1 >Vigun09g217700.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g217700.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g217700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=158bpback to top mRNA from alignment at Vu09:39131766..39132239- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g217700.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g217700.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g217700.1; organism=Vigna unguiculata; type=mRNA; length=474bp; location=Sequence derived from: Vu09:39131766..39132239- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:39131766..39132239- >Vigun09g217700.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g217700.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g217700.1; organism=Vigna unguiculata; type=CDS; length=474bp; location=Sequence derived from: Vu09:39131766..39132239- (Vigna unguiculataback to top |