Vigun09g228800.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: CRL5_ORYSJ (AP2-like ethylene-responsive transcription factor CRL5 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL5 PE=2 SV=1) HSP 1 Score: 400.979 bits (1029), Expect = 3.336e-130 Identity = 225/385 (58.44%), Postives = 262/385 (68.05%), Query Frame = 1
Query: 868 PVH-RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKDNDPRNEARDCGMXXXXXXXGVMTSEGRNSNEKDSEWKMVLFXXXXXXXXXXXXXXXKIMKCGNYRNSAFSGALQDLIGIDSVEECGKIGTHFXXXXXXXXXXXXXXXXXPEKT-----GPSLLFPKPS----------METKIV-NPISTSVTSWLPSPTVQMRPPPAISLSHLPVFAAWTD 1971
PVH RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ GGYDMEEKAARAYDLAALKYWGPSTHINF +E+Y ELEEMK+M+RQEYVAHLRRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRV+GNKDLYLGTFSTQEEAAEAYDVAAIKFRG NAVTNFDI+RYDV++IMAS LL +LARRN + V + D+ WK +Q + ++ G +AFS L DL+ +D+ + + S +SL +S S E + G S+LF KPS TK++ P+ + SW+ SP R PPA+S++H+P+FAAWTD
Sbjct: 272 PVHHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQ---GGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAIKFRGLNAVTNFDITRYDVDKIMASNTLLPADLARRNAATTTSKDDHSAAGAGAI----VSVHSAADIAVADTLWKAT------TAPRQQQQHHDDVVLSGA-DQAAFS-VLHDLVAVDAAAAHQQQQQQQHMSMSAASSLVTSLSNSREGSPDRGGGLSMLFAKPSPAVAASAQQQASTKLMAAPL--PLGSWVSSPPASAR-PPAVSIAHMPLFAAWTD 638 HSP 2 Score: 63.1586 bits (152), Expect = 5.129e-9 Identity = 49/144 (34.03%), Postives = 62/144 (43.06%), Query Frame = 1
Query: 49 WLGFSLSPHM---------------NLEXXXXXXXXXXXXXXXFYMSSPHISTSGICYGVGGN-----GNFHSPLTVMPIKSDGSLCILEALNRSQSQVMTQNSTPKLEDFLGGATMGTHEYGSHERGANAMALSLD---SIYY 411
WLGFSLSPHM + + + S + + YG+ G+ ++S L MP+KSDGSLCI+EAL R+ + PKLEDFLG A AMALSLD S YY
Sbjct: 18 WLGFSLSPHMASSTMDEHHHVHHHQQQQQQQQQQQHHQQQQHGLFFPSVTTAAAAAAYGLAGDVVAATNGYYSQLASMPLKSDGSLCIMEALRRTDQ----DHHGPKLEDFLGAAQ-------------PAMALSLDNTSSFYY 144
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: AIL1_ARATH (AP2-like ethylene-responsive transcription factor AIL1 OS=Arabidopsis thaliana OX=3702 GN=AIL1 PE=2 SV=1) HSP 1 Score: 357.451 bits (916), Expect = 3.022e-116 Identity = 169/218 (77.52%), Postives = 192/218 (88.07%), Query Frame = 1
Query: 811 DSVAVDAK-KRGHVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELAR 1461
+ V VD K KR VK K+ V RKS+D++GQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTR+GRQVYLGGYD EEKAARAYDLAALKYWGP+TH+NF + NY E+EE+ +M+RQE+VA LRR SSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYD+AAIKFRG NAVTNFDI+RYDV+RI +S ++ + A+
Sbjct: 188 EPVKVDEKRKRLVVKPQVKESVPRKSVDSYGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRRGRQVYLGGYDEEEKAARAYDLAALKYWGPTTHLNFPLSNYEKEIEELNNMNRQEFVAMLRRNSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDINRYDVKRICSSSTIVDSDQAK 405
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: AIL5_ARATH (AP2-like ethylene-responsive transcription factor AIL5 OS=Arabidopsis thaliana OX=3702 GN=AIL5 PE=2 SV=2) HSP 1 Score: 351.288 bits (900), Expect = 4.357e-112 Identity = 163/212 (76.89%), Postives = 184/212 (86.79%), Query Frame = 1
Query: 820 AVDAKKRGHVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGEL 1455
+V ++ + + + P +K++++FGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQVYLGGYD E+KAARAYDLAALKYWGP+T NF I NY ELEEMK M+RQE+VA LRRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYD+AAIKFRG NAVTNFDISRYDV+ I AS NL G L
Sbjct: 172 SVHKQQPNPLAVSEASPTPKKNVESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGPTTTTNFPISNYESELEEMKHMTRQEFVASLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYDVKSI-ASCNLPVGGL 382
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: PLET2_ARATH (AP2-like ethylene-responsive transcription factor PLT2 OS=Arabidopsis thaliana OX=3702 GN=PLT2 PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 1.678e-108 Identity = 159/200 (79.50%), Postives = 181/200 (90.50%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINL-LAGELARRNKD 1473
R++++TFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQVYLGGYD EEKAARAYDLAALKYWGPST NF I NY E+EEMK+M+RQE+VA +RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYD+AAIKFRG NAVTNF+I+RYDV+ I+ S L + G A+R K+
Sbjct: 178 RRTLETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPSTTTNFPITNYEKEVEEMKNMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESNTLPIGGGAAKRLKE 377
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: PLET1_ARATH (AP2-like ethylene-responsive transcription factor PLT1 OS=Arabidopsis thaliana OX=3702 GN=PLT1 PE=2 SV=1) HSP 1 Score: 341.273 bits (874), Expect = 6.857e-108 Identity = 158/200 (79.00%), Postives = 180/200 (90.00%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINL-LAGELARRNKD 1473
R+++DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ+RKGRQVYLGGYD E+KAAR+YDLAALKYWGPST NF I NY E+EEMK M+RQE+VA +RRKSSGFSRGAS+YRGVTRHHQHGRWQARIGRVAGNKDLYLGTFST+EEAAEAYD+AAIKFRG NAVTNF+I+RYDV+ I+ S L + G A+R K+
Sbjct: 169 RRALDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARSYDLAALKYWGPSTTTNFPITNYEKEVEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFEINRYDVKAILESSTLPIGGGAAKRLKE 368
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: BBM_ARATH (AP2-like ethylene-responsive transcription factor BBM OS=Arabidopsis thaliana OX=3702 GN=BBM PE=2 SV=2) HSP 1 Score: 339.732 bits (870), Expect = 2.875e-107 Identity = 161/203 (79.31%), Postives = 180/203 (88.67%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKD-NDP 1482
+K+I++FGQRTS YRGVTRHRWTGRYEAHLWDNSCK+EGQTRKGRQVYLGGYD EEKAARAYDLAALKYWG +T NF + Y E+EEMK M+RQEYVA LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTF TQEEAAEAYD+AAIKFRG +AVTNFD++RY+V+ I+ S +L G A+R KD N+P
Sbjct: 198 KKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPLSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLSAVTNFDMNRYNVKAILESPSLPIGSSAKRLKDVNNP 400
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: BBM2_BRANA (AP2-like ethylene-responsive transcription factor BBM2 OS=Brassica napus OX=3708 GN=BBM2 PE=2 SV=1) HSP 1 Score: 337.421 bits (864), Expect = 1.794e-106 Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKD 1473
+K+I++FGQRTS YRGVTRHRWTGRYEAHLWDNSCK+EGQTRKGRQVYLGGYD EEKAARAYDLAALKYWG +T NF + Y E+EEMK M+RQEYVA LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTF TQEEAAEAYD+AAIKFRG AVTNFD++RY+V+ I+ S +L G A+R K+
Sbjct: 198 KKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEIEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPIGSAAKRLKE 396
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: BBM1_BRANA (AP2-like ethylene-responsive transcription factor BBM1 OS=Brassica napus OX=3708 GN=BBM1 PE=2 SV=1) HSP 1 Score: 336.265 bits (861), Expect = 5.041e-106 Identity = 158/199 (79.40%), Postives = 176/199 (88.44%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNKD 1473
+K+I++FGQRTS YRGVTRHRWTGRYEAHLWDNSCK+EGQTRKGRQVYLGGYD EEKAARAYDLAALKYWG +T NF + Y E+EEMK M+RQEYVA LRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTF TQEEAAEAYD+AAIKFRG AVTNFD++RY+V+ I+ S +L G A+R K+
Sbjct: 198 KKTIESFGQRTSIYRGVTRHRWTGRYEAHLWDNSCKREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPMSEYEKEVEEMKHMTRQEYVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFGTQEEAAEAYDIAAIKFRGLTAVTNFDMNRYNVKAILESPSLPIGSAAKRLKE 396
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: AIL7_ARATH (AP2-like ethylene-responsive transcription factor AIL7 OS=Arabidopsis thaliana OX=3702 GN=AIL7 PE=2 SV=2) HSP 1 Score: 297.745 bits (761), Expect = 2.950e-92 Identity = 147/198 (74.24%), Postives = 172/198 (86.87%), Query Frame = 1
Query: 877 RKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNK 1470
+K ++T GQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQVYLGGYD E++AARAYDLAALKYWG + NF + +Y ELEEM M++QE++A LRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+T+EEAAEAYD+AAIKFRG NAVTNF+++RYD+E +M S + G A+R+K
Sbjct: 219 KKIVETLGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQVYLGGYDKEDRAARAYDLAALKYWGSTATTNFPVSSYSKELEEMNHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDIEAVMNSSLPVGGAAAKRHK 416
BLAST of Vigun09g228800.1 vs. DB:Swiss
Match: AIL6_ARATH (AP2-like ethylene-responsive transcription factor AIL6 OS=Arabidopsis thaliana OX=3702 GN=AIL6 PE=2 SV=1) HSP 1 Score: 287.345 bits (734), Expect = 3.131e-87 Identity = 153/213 (71.83%), Postives = 174/213 (81.69%), Query Frame = 1
Query: 832 KKRGHVKLGQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFSIENYHVELEEMKSMSRQEYVAHLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDVAAIKFRGANAVTNFDISRYDVERIMASINLLAGELARRNK 1470
K++ V + ++K DTFGQRTS YRGVTRHRWTGRYEAHLWDNSC++EGQ RKGRQ GGYD E+KAARAYDLAALKYW + NF I NY E+EEMK M++QE++A LRRKSSGFSRGASIYRGVTRHHQ GRWQARIGRVAGNKDLYLGTF+T+EEAAEAYD+AAIKFRG NAVTNF+++RYDVE IM S L G A+R K
Sbjct: 241 KEKAVVAVETSDCSNKKIADTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQ---GGYDKEDKAARAYDLAALKYWNATATTNFPITNYSKEVEEMKHMTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGINAVTNFEMNRYDVEAIMKSA-LPIGGAAKRLK 449 The following BLAST results are available for this feature:
BLAST of Vigun09g228800.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g228800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g228800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g228800.1; organism=Vigna unguiculata; type=mRNA; length=3351bpback to top protein sequence of Vigun09g228800.1_Vu_IT97K-499-35_v1.1 >Vigun09g228800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g228800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g228800.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=659bpback to top mRNA from alignment at Vu09:40079810..40084292- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g228800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g228800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g228800.1; organism=Vigna unguiculata; type=mRNA; length=4483bp; location=Sequence derived from: Vu09:40079810..40084292- (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:40079810..40084292- >Vigun09g228800.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g228800.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g228800.1; organism=Vigna unguiculata; type=CDS; length=1977bp; location=Sequence derived from: Vu09:40079810..40084292- (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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