Vigun09g231500.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: ACSA1_ARATH (WD repeat-containing protein ATCSA-1 OS=Arabidopsis thaliana OX=3702 GN=ATCSA-1 PE=1 SV=1) HSP 1 Score: 604.364 bits (1557), Expect = 0.000e+0 Identity = 299/449 (66.59%), Postives = 357/449 (79.51%), Query Frame = 1 Query: 13 VWKQIRDREDGKVRAKHFANRIKSYRISQLQLANHKDIVSPHKGAVNSLQIDSTEGRXXXXXXXXXXXXXXXXQRXXXXXXXXXFCKHRCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSA----------KLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPARSIDDEMGEGP-AEDQDNWS 1326 +W+ I+DRE G++R+ FANR KS RI LQL+N KD VSPH+G+VNSLQ+D TEGRYLLS A+D S AV+DVQR+ EA+ KH+C+F VDKQH+ HKYA+S+AIWYPIDTGLF+TGS+DH++ VWDTNT Q VV+FKMPGKV+RTAMS+++ SH LIAAGTEDVQVRLCDIASGAF+HTLSGHRDGVM+VEWS SSEWVL TGGCDGAIRFWDIRRAGCF+VLDQSQTQLG RPPILKR+ + S+ +L+ Q K + + + ++R+HPGMLST DRATAHYGAVTGLKAT DGMYLLSAGSDSR+RLWD++SG NTLVNFET R+Q NK +QL T+ D ALVFVPCM++VKAF MWSG T +LRGHYE VN+C FN DQELYT G+DRQILVWSP +++DEM + AED+DNWS Sbjct: 1 MWEAIKDRETGRIRSNSFANRFKSRRILSLQLSNRKDFVSPHRGSVNSLQVDLTEGRYLLSGAADGSAAVFDVQRATDYEASGLIAKHKCIFTVDKQHENGHKYAISSAIWYPIDTGLFITGSFDHYLKVWDTNTAQAVVDFKMPGKVYRTAMSSMAMSHTLIAAGTEDVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFWDIRRAGCFRVLDQSQTQLGFRPPILKRTAVGSKLSSVAKSSLGGQNRLKTLQSKQTGSQSVKGSSSAKASVEKSRQKRIHPGMLSTLDRATAHYGAVTGLKATNDGMYLLSAGSDSRIRLWDIESGRNTLVNFETGRIQTNKGIQLDTSDDPALVFVPCMKTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWSPGGTVEDEMVQDEVAEDKDNWS 449
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: ERCC8_HUMAN (DNA excision repair protein ERCC-8 OS=Homo sapiens OX=9606 GN=ERCC8 PE=1 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 2.440e-65 Identity = 136/397 (34.26%), Postives = 199/397 (50.13%), Query Frame = 1 Query: 88 RISQLQLANHKDIVSPHKGAVNSLQIDSTEGRXXXXXXXXXXXXXXXXQRXXXXXXXXXFCKHRCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRA-GCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATT--QDSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPA 1269 R+ L+L +D+ H G +N+L I+ EGRY+LS SD + +YD++ S+ CK C + + H H+Y+V T WYP DTG+F + S+D + VWDTNT Q F V+ MS +ST H L+A GT +V+LCD+ SG+ +H L GHR ++ V WS +++L T D ++ WD+RRA GC LDQ +G + Q + + TAH G V GL T DG++LL+ G+D+R+RLW+ +G NTLVN+ V K L+ + S VFVP ++ + ++SG T+L+GHY+ V+ C F QELY+G D IL W P+ Sbjct: 26 RVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYT--CKAVC--SIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQH----------------------------------NGKKSQAV--------------------ESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPS 364
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: ERCC8_BOVIN (DNA excision repair protein ERCC-8 OS=Bos taurus OX=9913 GN=ERCC8 PE=2 SV=1) HSP 1 Score: 207.608 bits (527), Expect = 3.045e-61 Identity = 142/425 (33.41%), Postives = 203/425 (47.76%), Query Frame = 1 Query: 88 RISQLQLANHKDIVSPHKGAVNSLQIDSTEGRXXXXXXXXXXXXXXXXQRXXXXXXXXXFCKHRCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRA-GCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATTQ--DSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPA--RSIDDEMGEGPAEDQ------DNWSS 1329 R+ L+L +D+ H VN+L I+ EGRY+LS SD + +YD++ S+ CK C V + H HKY+V T WYP DTG+F + S+D + VWDTNT Q+ F V+ MS ++T H L+A GT +V+LCD+ SG+ +H L GHR ++ V WS E++L T D + WD+RRA GC LDQ NG S+ G + G+ T D G++LL+ G+D+R+RLW+ +G NTLVN+ V K L+ + S VFVP ++ + ++SG T+L+GHY+ V+ C F QELY+G D IL W P+ S+ D+ E Q D WSS Sbjct: 26 RVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQPYYT--CKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQH--------------------------------NGKKSQAAESANTAHNGKVN-----GLCFTSD-----------------GLHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGLKFTVSSGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRDCNILAWVPSLCESVPDDDDETSTRSQLNPAFEDAWSS 392
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: ERCC8_MOUSE (DNA excision repair protein ERCC-8 OS=Mus musculus OX=10090 GN=Ercc8 PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 3.143e-61 Identity = 144/425 (33.88%), Postives = 202/425 (47.53%), Query Frame = 1 Query: 88 RISQLQLANHKDIVSPHKGAVNSLQIDSTEGRXXXXXXXXXXXXXXXXQRXXXXXXXXXFCKHRCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRA-GCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATT--QDSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPA--RSIDDEMGEGPAEDQ------DNWSS 1329 R+ L+L +D+ H VN+L I+ EGRY+LS SD V +YD++ ++ CK C V + H HKY+V T WYP DTG+F + S+D + VWDTNT Q F V+ MS +T H L+A GT +V+LCD+ SG+ +H L GHR ++ V WS +++L T D ++ WD+RRA GC LDQ NG S+ G + G+ T D G++LL+ G+D+R+RLW+ SG NTLVN+ V K LQ A + S VFVP ++ + + SG +L+GHY+ V+ C F QELY+G D IL W P + D+ E PA+ Q D WSS Sbjct: 26 RVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYMLSGGSDGVVVLYDLENASRQPHYT--CKAVC--SVGRSHPDVHKYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQH--------------------------------NGKKSQAAESANTAHNGKVN-----GLCFTSD-----------------GLHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGLQFAVSCGCSSEFVFVPHGSTIAVYAVHSGERLAMLKGHYKSVDCCVFQPNFQELYSGSRDCNILAWVPPSYEPVPDDDDEAPAKSQLNPAFADAWSS 392
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: CKN1_SCHPO (DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ckn1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.515e-26 Identity = 51/131 (38.93%), Postives = 78/131 (59.54%), Query Frame = 1 Query: 313 AHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRR-AGCFQVLD 702 +HK+ ++ W+P D G+F + S+DH + VWD +T Q F M ++ A S ++ SH LIA +RLCD+ SG++ H+LSGH V+ V+W +E+VL +G DG R WDIR+ + F +D Sbjct: 101 SHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIA-SHCLIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMD 230 HSP 2 Score: 60.8474 bits (146), Expect = 8.683e-9 Identity = 77/323 (23.84%), Postives = 138/323 (42.72%), Query Frame = 1 Query: 364 LFVTGSYDHHINVWDTNTTQ------VVVNF--KMPGKV-HRTAMSNL---STSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLI-TGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNF------ETVRLQINKPLQLATTQDS-ALVFVPCMR-SVKAFDMWSGNTYTVLRGH-YECVNSCWFNQQDQELYTGGNDRQILVWSP 1266 L V+G + INVWD ++++ +P + H+ +++L + + + + D +++ D+++ A+T + D + + WS + LI T +IR D++ L G +L K+ G+ A+G+ R I +V S LH L + +HYG V GL T D YL S G+D R+R+W+++SG NTL F +T ++ P + + DS V P S+ ++ G+ L H + +N + ++ +TG + I +WSP Sbjct: 62 LMVSGGANSSINVWDLQNIDQKEDEDLILDTLNAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFT-MEDMIYSHAWSPIASHCLIATAYRSSSIRLCDMQSGSYTHSLS------GHTGNVLAVDWCPKNEFVLASGS----ADGT-CRLWDIRKVSSSFACMD-LHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVH-PCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFVRRLSTHSLKRINCAAYRPDFEQCFTGDMNGNIYMWSP 370
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: YY46_NOSS1 (Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=alr3466 PE=4 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 4.711e-16 Identity = 81/316 (25.63%), Postives = 133/316 (42.09%), Query Frame = 1 Query: 337 AIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSG--CNTLVNFET-VRLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPARS 1275 ++ + D + +GS D + +WD ++ Q + FK G R S + +++A+G+ D VRL DI+SG + GH V +V + N +L TG D +R WDI + CF + Q T RS++ A L A+GS + + + S + H V + + DG L S G D +RLWD+ SG TL + + VR + P + S+ + V+ +D+ S L+GH VN+ F+ L +G D+ + +W + S Sbjct: 911 SVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK--GHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAF-NLDGSMLATGSGDQTVRLWDISSSQCFYIF-QGHTS-------CVRSVVFSSDGAML-------ASGSDDQTVRLWDISSGNCLYT------------LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSS------DQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSS 1190 HSP 2 Score: 84.7297 bits (208), Expect = 5.432e-16 Identity = 83/342 (24.27%), Postives = 142/342 (41.52%), Query Frame = 1 Query: 277 RCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATTQDSALVFVP---------CMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPARS 1275 CL++ Q Y+V+ + +D + TGS D + +WD +++Q F+ R+ + S+ ++A+G++D VRL DI+SG +TL GH V +V +S +L +GG D +R WDI C L + + R ++ + L ANGS + + + SK + H V + + DG L S D +RLWD+ S + LQ T+ +++VF P ++V+ +++ S +GH VNS FN L +G +D+ + +W + S Sbjct: 981 ECLYIF--QGHTGWVYSVA----FNLDGSMLATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVV--FSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDISSGNCLYTLQGYTSWV--------RFLVFSPNGVTL-------ANGSSDQIVRLWDISSKKCLYT------------LQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYI------------LQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSS 1274 HSP 3 Score: 70.4774 bits (171), Expect = 1.748e-11 Identity = 76/330 (23.03%), Postives = 134/330 (40.61%), Query Frame = 1 Query: 277 RCLFVVDKQHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSG-CNTLVNFETVRLQINKPLQLATTQDSALVFVPC-MRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVW 1260 +CL+++ Q H V++ ++ P D +GS D + +W+ N+++ + F+ + + N S ++A+G+ D VRL DI+S HT GH + V +V + N +L +G D +R W+I + C + + SS A+GS + + + S + L H V + + DG L S D +RLW + SG C T++ N + + D L+ ++V+ +++ SG L GH V S F+ L +G +D I +W Sbjct: 1191 KCLYIL-----QGHTSWVNSVVFNP-DGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGS--MLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAF-NPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWV---------------SSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFL------------GHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKC-----LYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479 HSP 4 Score: 59.3066 bits (142), Expect = 5.298e-8 Identity = 38/137 (27.74%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 313 AHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLG 723 H V + I+ P D + +GS D + +W ++ + + + + G + S L+A+G++D VRL +I+SG +TL GH + V +V +S S +L +G D I+ WD++ C + L + G Sbjct: 1366 GHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISSGKCL--YTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFS-SDGLILASGSDDETIKLWDVKTGECIKTLKSEKIYEG 1498 HSP 5 Score: 58.9214 bits (141), Expect = 6.247e-8 Identity = 73/316 (23.10%), Postives = 124/316 (39.24%), Query Frame = 1 Query: 367 FVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSS-----------AKLRGAQKKHANGSGSRQ-QPIGRVPSKGPMKQRLHPGMLSTQD---RATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSG-CNTLVNFETVRLQINKPLQLATTQDSALVFVPCM-RSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWS 1263 GS D + +WD ++ + + + + G + S +A+G+ D VRL DI+S + L GH V +V + N L +G D +R W+I + C + + SML SS +K + H N S P G + + G Q + +S+ H V+ + + DG L S D +RLW + SG C T N + + D A++ ++V+ + + SG L+GH V S F+ L +G +D+ + +W+ Sbjct: 1131 LANGSSDQIVRLWDISSKKCL--YTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVF-NPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGEC-----LYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWN 1438
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: DAW1_CHLRE (Dynein assembly factor with WDR repeat domains 1 OS=Chlamydomonas reinhardtii OX=3055 GN=DAW1 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.762e-12 Identity = 76/302 (25.17%), Postives = 126/302 (41.72%), Query Frame = 1 Query: 367 FVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTS--HMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLDQSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGC--NTLVNFETVRLQINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVW 1260 VTGS+D +WD T Q+ K H+T + LS + +IA G+ D +L D+ +G TL+GHR ++++ ++ + +++TG D R WD+R C VL G R + SS + A +GS + V S + + H V + G ++SA +D RL+ +G +TLV E +I+K Q + L+ ++ + +D +G VL GH + + SC FN + + TG D +W Sbjct: 152 IVTGSFDKTCKLWDAYTGQLYYTLKG----HQTEIVCLSFNPQSTIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGD-LIVTGSFDHDSRLWDVRTGQCVHVLS------GHRGEV---------SSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVK------------QGHTDEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEG---EISKV--AFNPQGTRLITASSDKTCRLWDCDTGECLQVLEGHTDEIFSCAFNYEGDFIITGSKDNTCRIW 416
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: NLE1_YEAST (Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RSA4 PE=1 SV=3) HSP 1 Score: 70.0922 bits (170), Expect = 1.322e-11 Identity = 79/345 (22.90%), Postives = 150/345 (43.48%), Query Frame = 1 Query: 310 QAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLS--TSHML-------IAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAG-CFQVLD-------------QSQTQLGRRPPILKRSMLTKDSSAKLRGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQD--RATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATTQDSALVFVPCMR--SVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWS 1263 + H V W P D + TGS D+ I +WD + Q + + + H +++LS H++ +A+ ++D +++ D S +T+SGH + V V+W +L +G D +R WDI G C +L ++G K+ +++ K +K +G+ ++ + V + L + ST+ R T H V + + DG Y++SA D+ ++LWD + G T R + Q+A + D L V C + ++K +D+ + L GH + V + ++ + + +GG D+ + +W+ Sbjct: 183 KGHYNWVLCVSWSP-DGEVIATGSMDNTIRLWDPKSGQCLGDAL---RGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWGGQG--LLYSGSHDRTVRVWDINSQGRCINILKSHAHWVNHLSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMM--VTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDG----KFISTFRGHVASVYQVAWSSDCRL-LVSCSKDTTLKVWDVRTRKLSVDLPGHKDEVYTVDWSVDGKRVCSGGKDKMVRLWT 514
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: RAD28_YEAST (Radiation-sensitive protein 28 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RAD28 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.382e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 1 Query: 316 HKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDI---ASGAFAHTLSGH---RDGVMTVEWSNSSEWVLITGGCDGAIRFWDIR 675 HKY ++T WY D G+F TGS D + +WDTN + V + + K+++ + + S +L+ A +ED RL D+ SG A + + ++ +++ E ++ G +G ++ WD+R Sbjct: 194 HKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDINLGYKINQIDNNVVDDSSLLVVA-SEDYYPRLIDLRTMNSGVTALGMGNQTRMQSEILCCKFNPVREQIIACGDMEGGVKLWDLR 318
BLAST of Vigun09g231500.1 vs. DB:Swiss
Match: HETE1_PODAS (Vegetative incompatibility protein HET-E-1 OS=Podospora anserina OX=5145 GN=HET-E1 PE=4 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 2.351e-10 Identity = 84/356 (23.60%), Postives = 139/356 (39.04%), Query Frame = 1 Query: 301 QHQQAHKYAVSTAIWYPIDTGLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRTAMSNLSTSHMLIAAGTEDVQVRLCDIASGAFAHTLSGHRDGVMTVEWSNSSEWVLITGGCDGAIRFWDIRRAGCFQVLD---QSQTQLGRRPPILKRSMLTKDSSAKL----RGAQKKHANGSGSRQQPIGRVPSKGPMKQRLHPGMLSTQDRATAHYGAVTG---------------LKATEDGMYLLSAGSDSRLRLWDVQSGCNTLVNFETVRLQINKPLQLATTQDSALVFVPCMR-SVKAFDMWSGNTYTVLRGHYECVNSCWFNQQDQELYTGGNDRQILVWSPARSIDDEMGEG 1299 Q + H +V + + P D +GS D I +WD + + G R S +A+G++D +++ D ASG TL GH V++V +S + V +G D I+ WD C Q L+ S + P + + + D + K+ G + G G Q + P QR+ G + D + AV+G + + DG + S D +++WD SG T +T+ +A + D V + ++K +D SG L GH V S F+ Q + +G +D+ I +W A + EG Sbjct: 877 QTLEGHGGSVWSVAFSP-DRERVASGSDDKTIKIWDAASGTCTQTLE--GHGGRVQSVAFSPDGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRV-ASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPD----GQRVASG---SDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCT----QTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEG 1217 The following BLAST results are available for this feature:
BLAST of Vigun09g231500.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Vigun09g231500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g231500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g231500.1; organism=Vigna unguiculata; type=mRNA; length=1747bpback to top protein sequence of Vigun09g231500.1_Vu_IT97K-499-35_v1.1 >Vigun09g231500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g231500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g231500.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=444bpback to top mRNA from alignment at Vu09:40293456..40297082+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Vigun09g231500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g231500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g231500.1; organism=Vigna unguiculata; type=mRNA; length=3627bp; location=Sequence derived from: Vu09:40293456..40297082+ (Vigna unguiculataback to top Coding sequence (CDS) from alignment at Vu09:40293456..40297082+ >Vigun09g231500.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g231500.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g231500.1; organism=Vigna unguiculata; type=CDS; length=1332bp; location=Sequence derived from: Vu09:40293456..40297082+ (Vigna unguiculataback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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