Vigun09g232000.1

Transcript Overview
NameVigun09g232000.1
Unique NameVigun09g232000.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1666
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:40338653..40340508 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL371Pisum sativum Cameor genome v1aPisum sativum
crvuL109Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL495Pisum sativum Cameor genome v1aPisum sativum
psvuL652Pisum sativum Cameor genome v1aPisum sativum
pvvuL067Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL448Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL460Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL284Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL387Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL349Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0608Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL649Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL695Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0929Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1039Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0538Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0704Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL086Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL538Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL654Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL714Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR698Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL460Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL574Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL434Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL533Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL122Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL459Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL421Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL593Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL747Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL832Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR449Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL315Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL603Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL261Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL566Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL605Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
carvuL612Cicer arietinum
carvuL663Cicer arietinum
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL437Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR712Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR735Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR760Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR773Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL087Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL137Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL293Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL150Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL308Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL065Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL253Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL346Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR502Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR520Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Vigst.03G166500.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Va04G067060.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_18370Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_02G00439.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Phvul.001G027300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan07g265100Vigna angularis Jingnong 6 genome v1.1Vigna angularis
PvulFLAVERTChr01.186Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
evm.model.Chr09.1428Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
evm.model.Chr08.446Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.02G042800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Cc_v2.0_10717.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vfaba.Tiffany.R1.3g180040.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Ca_14852.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Hedin2.R1.3g220400.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004498941.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Phvul.009G071200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vum_03G01849.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_01590Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
LR48_mrnaVigan04g242800Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Va07G067500.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
PvulFLAVERTChr09.541Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cr_02828.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
XM_058869137.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014647077.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004501466.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Psat6g016080.1Pisum sativum Cameor genome v1aPisum sativum
Psat06G0041100-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
jg35396.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-TanjilR_30627Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.03G263200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g030200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g232000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun08g030200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g232000Vigun09g232000_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g232000.1Vigun09g232000.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g232000.1_Vu_IT97K-499-35_v1.1Vigun09g232000.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g232000.1.v1.1.CDS.2Vigun09g232000.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g232000.1.v1.1.CDS.1Vigun09g232000.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g232000.1.v1.1.three_prime_UTR.1Vigun09g232000.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g232000.1.v1.1.five_prime_UTR.1Vigun09g232000.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB4_ARATH (U-box domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=PUB4 PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 1.040e-53
Identity = 147/308 (47.73%), Postives = 202/308 (65.58%), Query Frame = 1
Query:   76 STPSSESRRLLIACAADNSDEFIRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIELLRQPRSGNGAGR 999
            S PS+E+RR L           ++ LV  L S S++ Q+QAT E+RLL+K+  +NR+ I  +GAI  L+  L  S+D   QE  VTA+LNLS+ D NK+ I  +GA++PL+  LE G+  AKEN+A  L  LS  EE+++ IG++GAI PLV LL  G  RGKKDAATAL+ +   +ENK   V++G +R L++LM D  + MVDKAV V++ +  + EGR A+ +EGGIP+LVE+VE+G+ R KE A   LLQ+   S  +  MV +EGA+PPLVA SQS + R R KA+ L+   R  R GN AGR
Sbjct:  526 SAPSNETRRDLSEVETQ-----VKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAI-VLLVELLYSTDSATQENAVTALLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLM-DPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLSTNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHGN-AGR 825          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB2_ARATH (U-box domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=PUB2 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.809e-46
Identity = 133/283 (47.00%), Postives = 182/283 (64.31%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGT-PTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIELLRQPRSGN 987
            ++ L+ +L S S++ Q++AT  IR+L++N  +NR+ IA+  AI P +  L  S+D ++Q   VT +LNLS+ D NK LI  SGA+ PL+  L+TG    AK N+A  L  LS  EE +  IG AGAI PLV LL  G L GKKDAATAL+ +    ENK + + AG +R LVELM D    MV+KAV V++ +  V EG+ A+ EEGGIPVLVE+VE+G+ R KE A   LLQ+C  S  +   V REG IPPLVA ++S + R + KA+ L++  +  R  N
Sbjct:  423 VKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAI-PSLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVELM-DPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFKAHRQSN 703          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 1.267e-43
Identity = 123/278 (44.24%), Postives = 180/278 (64.75%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMAD-LGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIELLRQ 972
            IR LV  LSS S ED++ A  EIR LSK   +NR+ IA+AGAI P++  L +S D+  QE  +T +LNLS+ + NKELI  +GAV  +V+ L  GT  A+ENAA  L  LS  +E+++ IG +GAIP LV LLE G  RGKKDAATAL+ +C    NK RAVRAG++ ALV++++D     MVD+A+ ++SV+    + ++A+V+   +P L+ I++    R +E A  +LL +C+        + R GA+ PL+  S++ + R + KA  L+ELLR+
Sbjct:  333 IRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAI-PVLVNLLTSEDVATQENAITCVLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAKSAIVKANTLPALIGILQTDQTRNRENAAAILLSLCKRDTEKLITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLRK 609          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.538e-42
Identity = 116/273 (42.49%), Postives = 175/273 (64.10%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIE 960
            I  L+  L+  + EDQ+ A  EIRLL+K   +NRV IA+AGAI PL+  L S+ D ++QE+ VTA+LNLS+C+ NK  I S+GA+  +V+ L+ G+  A+ENAA  L  LS  +E++V IG  GAIPPLV LL  G  RGKKDAATAL+ +C  + NK +A+RAGV+  L  L+ + GS MVD+A+ +++++    EG+A +     +P LVE +  G+ R +E A  VL+ +C     +     + G + PL+  + + ++R + KA +L+E
Sbjct:  354 IEDLMWRLAYGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAI-PLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILAILSSHPEGKAIIGSSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHLVEAQKLGLMGPLIDLAGNGTDRGKRKAAQLLE 625          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.325e-42
Identity = 123/278 (44.24%), Postives = 176/278 (63.31%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSS-MXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIELLRQ 972
            IR LV  LSS SIED++ A  EIR LSK   +NR+ IA+AGAI  LV LL+S  D + QE  VT ILNLS+ + NKELI  +GAV  +V  L  G+  A+ENAA  L  LS  +E+++ IG +GAI  LV LL+ G +RGKKDAATAL+ +C  + NK RAVRAG+++ LV+++ D  S  M D+A+ ++SV+      + A++    IP L++ ++    R +E A  +LL +C+        + R GA+ PL+  S+  + R + KA  L+ELLR+
Sbjct:  343 IRALVCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSVLASNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCLCKRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRK 620          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB12_ARATH (U-box domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.074e-42
Identity = 117/281 (41.64%), Postives = 183/281 (65.12%), Query Frame = 1
Query:  124 DNSDEFIRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENK-ELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVARE--GAIPPLVAFSQSHSNRPRHKAEKLI 957
            D+    I  L+L L+S   ED++ A  EIRLL+K    NRV IA +GAI  LV+LL+ S+D + QE+ VT+ILNLS+C ENK +++ SSGAV  +V  L+ G+  A+ENAA  L  LS  +E++V IG AGAIPPLV LL  G  RGKKDAATAL+ +C  + NK +AVRAG++  L+ L+ +  S MVD+++ +++++    +G++ +     +PVLV+ +  G+ R KE +  VL+ +C  SW  + ++  +  G +  L+  +++ ++R + KA +L+
Sbjct:  351 DDEHNKIEELLLKLTSQQPEDRRSAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGMVDESLSILAILSSHPDGKSEVGAADAVPVLVDFIRSGSPRNKENSAAVLVHLC--SWNQQHLIEAQKLGIMDLLIEMAENGTDRGKRKAAQLL 629          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB3_ARATH (U-box domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=PUB3 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 1.017e-41
Identity = 140/286 (48.95%), Postives = 185/286 (64.69%), Query Frame = 1
Query:  151 LVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRA-GAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIELLRQPRSGN-GAGRS 1002
            LV +L S S + +  A  EIR L+ N  ENRV I + GAI PL+SLL S   L  QE+ VTA+LNLS+ + NK +I   GA++PLV  L TG   AKEN+A +L  LS  + +R  IG++  AI  LV LL  G  RGKKDAA+AL+ +  T +NK R V+A  ++ LVEL+ D    MVDKAV +++ +  V EGR A+V EGGIP+LVE V++G+QR KE A  VLLQ+C  S  + T+V +EGAIPPLVA SQS + R + KA++L+   R  R      GRS
Sbjct:  477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLT-QEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELL-DPDLEMVDKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLSHFRNQRDARMKKGRS 760          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: PUB12_ORYSJ (U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica OX=39947 GN=PUB12 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 5.885e-36
Identity = 116/285 (40.70%), Postives = 176/285 (61.75%), Query Frame = 1
Query:  151 LVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAI-PPLVAFSQSHSNRPRHKAEKLIELLRQPR----SGNG 990
            L+  L S + ++Q+ A  EIRLL+K    NR+ IA+AGAI PL+  L SSSD + QE+ VTA+LNLS+ + NK  I  S A+  +V  L+TG+   +ENAA  L  LS  +E++V IG AGAIPPL+ LL  G  RGKKDAATA++ +C  + NKVRAV+AG++  L+  + D    M+D+A+ ++S++ G  EG+  +     IP LVE+++ G+ R +E A  +L  +C      +T+ A+   +   L   S++ ++R + KA  ++EL+ Q       GNG
Sbjct:  328 LMNRLRSGNQDEQRAAAGEIRLLAKRNVNNRICIAEAGAI-PLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARSEPIPPLVEVIKTGSPRNRENAAAILWLLCSAD-TEQTLAAKAAGVEDALKELSETGTDRAKRKASSILELMHQANEDSLKGNG 610          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: SL11_ORYSJ (E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.986e-34
Identity = 117/275 (42.55%), Postives = 173/275 (62.91%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQIC--EESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIE 960
            I  L+  L S   E+Q+ A  E+RLL+K    NR+ IA+AGAI PL+  L SSSDL+ QE+ VTA+LNLS+ ++NK  I SSGAV  +V  L+ G+  A+ENAA  L  LS  +E +V IG  GAIP LV LL  G  RGKKDAA AL+ +C  + NK RA+RAG++  ++ L+ +   +++D+A+ ++S++    EG+AA+     +PVLVE++  GT R +E A  V+L +C  E   V+       G + PL   + + ++R + KA +L+E
Sbjct:  369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAI-PLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642          
BLAST of Vigun09g232000.1 vs. DB:Swiss
Match: SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.986e-34
Identity = 117/275 (42.55%), Postives = 173/275 (62.91%), Query Frame = 1
Query:  142 IRHLVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPXXXXXXXXXXXXXQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENAACALLRLSQREEDRVAIGRAGAIPPXXXXXXXXXXXXXXDAATALYAVCSTKENKVRAVRAGVMRALVELMADLGSSMXXXXXXXXXXXXXXXXXXXXXXXXXXIPVLVEIVEVGTQRQKEIAVGVLLQIC--EESWVYRTMVAREGAIPPLVAFSQSHSNRPRHKAEKLIE 960
            I  L+  L S   E+Q+ A  E+RLL+K    NR+ IA+AGAI PL+  L SSSDL+ QE+ VTA+LNLS+ ++NK  I SSGAV  +V  L+ G+  A+ENAA  L  LS  +E +V IG  GAIP LV LL  G  RGKKDAA AL+ +C  + NK RA+RAG++  ++ L+ +   +++D+A+ ++S++    EG+AA+     +PVLVE++  GT R +E A  V+L +C  E   V+       G + PL   + + ++R + KA +L+E
Sbjct:  369 IDALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAI-PLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLE 642          
The following BLAST results are available for this feature:
BLAST of Vigun09g232000.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PUB4_ARATH1.040e-5347.73U-box domain-containing protein 4 OS=Arabidopsis t... [more]
PUB2_ARATH4.809e-4647.00U-box domain-containing protein 2 OS=Arabidopsis t... [more]
PUB11_ARATH1.267e-4344.24U-box domain-containing protein 11 OS=Arabidopsis ... [more]
PUB13_ARATH2.538e-4242.49U-box domain-containing protein 13 OS=Arabidopsis ... [more]
PUB10_ARATH4.325e-4244.24U-box domain-containing protein 10 OS=Arabidopsis ... [more]
PUB12_ARATH8.074e-4241.64U-box domain-containing protein 12 OS=Arabidopsis ... [more]
PUB3_ARATH1.017e-4148.95U-box domain-containing protein 3 OS=Arabidopsis t... [more]
PUB12_ORYSJ5.885e-3640.70U-box domain-containing protein 12 OS=Oryza sativa... [more]
SL11_ORYSJ1.986e-3442.55E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa ... [more]
SL11_ORYSI1.986e-3442.55Protein spotted leaf 11 OS=Oryza sativa subsp. ind... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000225ArmadilloSMARTSM00185arm_5coord: 201..241
e-value: 32.0
score: 9.4
coord: 119..159
e-value: 0.0064
score: 25.7
coord: 242..282
e-value: 9.4
score: 13.5
coord: 160..200
e-value: 0.088
score: 21.9
coord: 77..118
e-value: 4.3E-5
score: 32.9
IPR000225ArmadilloPFAMPF00514Armcoord: 78..117
e-value: 6.6E-8
score: 32.3
coord: 120..158
e-value: 5.4E-6
score: 26.2
coord: 162..195
e-value: 9.8E-5
score: 22.3
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 88..131
score: 13.037
IPR000225ArmadilloPROSITEPS50176ARM_REPEATcoord: 130..172
score: 8.627
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 45..244
e-value: 3.4E-38
score: 133.1
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 245..322
e-value: 7.4E-10
score: 40.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 44..315

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g232000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g232000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g232000.1; organism=Vigna unguiculata; type=mRNA; length=1666bp
TCATTTGGGAAAAGAAGAAGAAAGTAAATTAAAGAACAATAAAAGTTGGT
TAGGAAGTATATATCATAGTGAATGAATAAACAATAAAGGAAGTTTACAT
AAAAAGAAAATGGGGATATTGGATTAAGAAGCATAGCGTGGTATTAATTA
AAATTTGTTGAAGATGAAGGTTCTGGAAATGAGGGGCCTGGGGTGTGGGT
GACCTGTAGTGTTGGGAATGATTGGTGTGAAAGCATGTGCAGAGGGGAAA
CAAAATGGTAACAGTGGAAACAAAAATGAAAAATAGAAAAATACGTGCAC
GTGTCCCTCAACACCAGACCGCCACCCAGGAAACCCCTCCCATATATTTG
GCACCGCATTCCTTCTTTTTCCTTTTTTTTTTCTTCATTCACATTCTCAG
TGTACAGGGAGGGCCATGTTAACCACCGTCAACAACGACAACTCCTTTTC
CGCTTTCAGCGACTGCAACAGCGACAGATCCGCCGAATTCTCCACGCCGT
CTTCCGAGAGCCGCCGCCTCCTCATCGCCTGCGCCGCCGACAATTCCGAC
GAATTCATTCGCCACCTCGTTCTCAACCTCAGTTCCTGTTCCATTGAGGA
CCAGAAGCAAGCCACCATGGAAATCAGGCTACTCTCCAAGAACAAGGAAG
AGAACCGCGTCAAGATCGCAAAAGCCGGCGCGATCGAACCCTTGGTTTCA
CTCCTATCGTCCTCCTCAGACCTTCAGCTTCAGGAGTACGTGGTGACCGC
GATTCTCAATCTCTCGCTCTGCGACGAGAACAAAGAGCTCATCAATTCCT
CCGGAGCGGTGAAGCCTCTTGTGAGAGCGCTggagacggggacgccgacg
gcgaaggagaacgcggcgtgcgCGCTGCTCCGGCTCTCGCAGAGAGAGGA
GGACAGGGTTGCGATAGGGAGGGCGGGGGCGATTCCGCCTCTGGTGAAGC
TTCTAGAAGGCGGGGGTTTGCGCGGGAAGAAGGACGCGGCGACAGCGCTG
TACGCGGTGTGTTCGACGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGG
GGTTATGAGGGCGCTGGTGGAGCTGATGGCGGACCTGGGATCGAGCATGG
TGGACAAGGCGGTGTACGTGGTGAGCGTGGTTGTTGGGGTGGTGGAGGGG
AGGGCGGCGCTGGTGGAAGAAGGGGGGATTCCGGTGCTGGTGGAGATAGT
GGAGGTGGGGACGCAGAGGCAGAAGGAGATCGCCGTTGGGGTTCTGTTGC
AGATTTGCGAGGAGAGTTGGGTGTACCGTACTATGGTGGCACGCGAAGGA
GCCATTCCACCCCTCGTTGCTTTCTCACAGTCACACTCCAATCGCCCCAG
ACACAAGGCTGAGAAACTCATAGAGCTTCTACGACAACCAAGATCCGGCA
ATGGCGCTGGTCGTTCCTAGGAAATGTCAGCATAAACCCTACCACCAGAC
AAACAAAAATATAGATTGGGGGCACAACTTGTAAATAAATACCTCTGTAA
TCAAAAAGCTTTCTCCTTCTGTGATCTAAATCATGCCACCCTCCTACTCT
TTTTTTTTTCTTTATACTTTCGCTCCACATATTTTCCTTTTAAAATTTTA
TATACAGCCATAATTGAAGGGGCATAATAAACCGGTTTATAACCTCTTTT
CATACATGAAAAGCCT
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protein sequence of Vigun09g232000.1_Vu_IT97K-499-35_v1.1

>Vigun09g232000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g232000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g232000.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=335bp
MLTTVNNDNSFSAFSDCNSDRSAEFSTPSSESRRLLIACAADNSDEFIRH
LVLNLSSCSIEDQKQATMEIRLLSKNKEENRVKIAKAGAIEPLVSLLSSS
SDLQLQEYVVTAILNLSLCDENKELINSSGAVKPLVRALETGTPTAKENA
ACALLRLSQREEDRVAIGRAGAIPPLVKLLEGGGLRGKKDAATALYAVCS
TKENKVRAVRAGVMRALVELMADLGSSMVDKAVYVVSVVVGVVEGRAALV
EEGGIPVLVEIVEVGTQRQKEIAVGVLLQICEESWVYRTMVAREGAIPPL
VAFSQSHSNRPRHKAEKLIELLRQPRSGNGAGRS*
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mRNA from alignment at Vu09:40338653..40340508-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g232000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g232000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g232000.1; organism=Vigna unguiculata; type=mRNA; length=1856bp; location=Sequence derived from: Vu09:40338653..40340508- (Vigna unguiculata
TCATTTGGGAAAAGAAGAAGAAAGTAAATTAAAGAACAATAAAAGTTGGT TAGGAAGTATATATCATAGTGAATGAATAAACAATAAAGGAAGTTTACAT AAAAAGAAAATGGGGATATTGGATTAAGAAGCATAGCGTGGTATTAATTA AAATTTGTTGAAGATGAAGGTTCTGGAAATGAGGGGCCTGGGGTGTGGGT GACCTGTAGTGTTGGGAATGATTGGTGTGAAAGCATGTGCAGAGGGGAAA CAAAATGGTAACAGTGGAAACAAAAATGAAAAATAGAAAAATACGTGCAC GTGTCCCTCAACACCAGACCGCCACCCAGGAAACCCCTCCCATATATTTG GCACCGCATTCCTTCTTTTTCCTTTTTTTTTTCTTCATTCACATTCTCAG TGTACAGGGAGGGCCATGTTAACCACCGTCAACAACGACAACTCCTTTTC CGCTTTCAGCGACTGCAACAGCGACAGATCCGCCGAATTCTCCACGCCGT CTTCCGAGAGCCGCCGCCTCCTCATCGCCTGCGCCGCCGACAATTCCGAC GAATTCATTCGCCACCTCGTTCTCAACCTCAGTTCCTGTTCCATTGAGGA CCAGAAGCAAGCCACCATGGAAATCAGGCTACTCTCCAAGAACAAGGAAG AGAACCGCGTCAAGATCGCAAAAGCCGGCGCGATCGAACCCTTGGTTTCA CTCCTATCGTCCTCCTCAGACCTTCAGCTTCAGGAGTACGTGGTGACCGC GATTCTCAATCTCTCGCTCTGCGACGAGAACAAAGAGCTCATCAATTCCT CCGGAGCGGTGAAGCCTCTTGTGAGAGCGCTGGAGACGGGGACGCCGACG GCGAAGGAGAACGCGGCGTGCGCGCTGCTCCGGCTCTCGCAGAGAGAGGA GGACAGGGTTGCGATAGGGAGGGCGGGGGCGATTCCGCCTCTGGTGAAGC TTCTAGAAGGCGGGGGTTTGCGCGGGAAGAAGGACGCGGCGACAGCGCTG TACGCGGTGTGTTCGACGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGG GGTTATGAGGGCGCTGGTGGAGCTGATGGCGGACCTGGGATCGAGCATGG TGGACAAGGCGGTGTACGTGGTGAGCGTGGTTGTTGGGGTGGTGGAGGGG AGGGCGGCGCTGGTGGAAGAAGGGGGGATTCCGGTGCTGGTGGAGATAGT GGAGGTGGGGACGCAGAGGCAGAAGGAGATCGCCGTTGGGGTTCTGTTGC AGATTTGCGAGGAGAGTTGGGTGTACCGTACTATGGTGGCACGCGAAGGA GCCATTCCACCCCTCGTTGCTTTCTCACAGTCACACTCCAATCGCCCCAG ACACAAGGTGAACCTCACCACCACCATGCATCACTTTTATATTTTTTTAT TAATCAAAAACTACTTTTACAGTTCTAATTTCCAACCATTATTATATTTT GTTGCAAAGTCATAGGATATGATATCACGTTGTTTCTTTGTATGGGTCTA AACTGAAGTTGTTGTTTATTTGTTATTGTTGGTGTACGTGGGAACAGGCT GAGAAACTCATAGAGCTTCTACGACAACCAAGATCCGGCAATGGCGCTGG TCGTTCCTAGGAAATGTCAGCATAAACCCTACCACCAGACAAACAAAAAT ATAGATTGGGGGCACAACTTGTAAATAAATACCTCTGTAATCAAAAAGCT TTCTCCTTCTGTGATCTAAATCATGCCACCCTCCTACTCTTTTTTTTTTC TTTATACTTTCGCTCCACATATTTTCCTTTTAAAATTTTATATACAGCCA TAATTGAAGGGGCATAATAAACCGGTTTATAACCTCTTTTCATACATGAA AAGCCT
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Coding sequence (CDS) from alignment at Vu09:40338653..40340508-

>Vigun09g232000.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g232000.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g232000.1; organism=Vigna unguiculata; type=CDS; length=1005bp; location=Sequence derived from: Vu09:40338653..40340508- (Vigna unguiculata
ATGTTAACCACCGTCAACAACGACAACTCCTTTTCCGCTTTCAGCGACTG
CAACAGCGACAGATCCGCCGAATTCTCCACGCCGTCTTCCGAGAGCCGCC
GCCTCCTCATCGCCTGCGCCGCCGACAATTCCGACGAATTCATTCGCCAC
CTCGTTCTCAACCTCAGTTCCTGTTCCATTGAGGACCAGAAGCAAGCCAC
CATGGAAATCAGGCTACTCTCCAAGAACAAGGAAGAGAACCGCGTCAAGA
TCGCAAAAGCCGGCGCGATCGAACCCTTGGTTTCACTCCTATCGTCCTCC
TCAGACCTTCAGCTTCAGGAGTACGTGGTGACCGCGATTCTCAATCTCTC
GCTCTGCGACGAGAACAAAGAGCTCATCAATTCCTCCGGAGCGGTGAAGC
CTCTTGTGAGAGCGCTGGAGACGGGGACGCCGACGGCGAAGGAGAACGCG
GCGTGCGCGCTGCTCCGGCTCTCGCAGAGAGAGGAGGACAGGGTTGCGAT
AGGGAGGGCGGGGGCGATTCCGCCTCTGGTGAAGCTTCTAGAAGGCGGGG
GTTTGCGCGGGAAGAAGGACGCGGCGACAGCGCTGTACGCGGTGTGTTCG
ACGAAGGAGAACAAGGTGAGGGCGGTGAGGGCGGGGGTTATGAGGGCGCT
GGTGGAGCTGATGGCGGACCTGGGATCGAGCATGGTGGACAAGGCGGTGT
ACGTGGTGAGCGTGGTTGTTGGGGTGGTGGAGGGGAGGGCGGCGCTGGTG
GAAGAAGGGGGGATTCCGGTGCTGGTGGAGATAGTGGAGGTGGGGACGCA
GAGGCAGAAGGAGATCGCCGTTGGGGTTCTGTTGCAGATTTGCGAGGAGA
GTTGGGTGTACCGTACTATGGTGGCACGCGAAGGAGCCATTCCACCCCTC
GTTGCTTTCTCACAGTCACACTCCAATCGCCCCAGACACAAGGCTGAGAA
ACTCATAGAGCTTCTACGACAACCAAGATCCGGCAATGGCGCTGGTCGTT
CCTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000225Armadillo
IPR011989ARM-like
IPR016024ARM-type_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding