Vigun09g234100.1

Transcript Overview
NameVigun09g234100.1
Unique NameVigun09g234100.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2131
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:40481812..40484602 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL161Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL287Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuL376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
psvuL371Pisum sativum Cameor genome v1aPisum sativum
crvuL109Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL495Pisum sativum Cameor genome v1aPisum sativum
psvuL652Pisum sativum Cameor genome v1aPisum sativum
pvvuL067Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL448Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL452Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL284Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL387Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
caivuL0120Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL349Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0608Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL1042Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL649Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL695Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0947Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1039Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0383Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0538Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0704Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0765Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1023Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL086Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL203Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL654Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL714Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR656Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR698Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL460Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL574Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL434Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL533Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL122Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL459Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL567Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL421Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL593Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL832Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR426Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR434Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR449Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL315Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL603Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL653Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL261Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL566Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL605Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
carvuL612Cicer arietinum
carvuL663Cicer arietinum
ccavuL175Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL336Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL437Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL500Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR712Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR735Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR760Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR748Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR773Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR785Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL087Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL137Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL293Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL098Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL150Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL308Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL065Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL253Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL346Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR502Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR520Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.009G068900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr09.521Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vigst.02G040800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058930184.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
rna-XM_014644756.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vigan.02G049700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan09g012500Vigna angularis Jingnong 6 genome v1.1Vigna angularis

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun09g234100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g234100Vigun09g234100_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g234100.1Vigun09g234100.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g234100.1_Vu_IT97K-499-35_v1.1Vigun09g234100.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g234100.1.v1.1.CDS.8Vigun09g234100.1.v1.1.CDS.8_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.7Vigun09g234100.1.v1.1.CDS.7_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.6Vigun09g234100.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.5Vigun09g234100.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.4Vigun09g234100.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.3Vigun09g234100.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.2Vigun09g234100.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g234100.1.v1.1.CDS.1Vigun09g234100.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g234100.1.v1.1.three_prime_UTR.1Vigun09g234100.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g234100.1.v1.1.five_prime_UTR.1Vigun09g234100.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


Homology
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA31_ARATH (Putative cyclin-A3-1 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 7.306e-115
Identity = 190/348 (54.60%), Postives = 243/348 (69.83%), Query Frame = 1
Query:    7 TRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEKSRGV-----KNLNAXXXXXXXXXXXXFHIDESIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            TRAA+KRKA+    + K+   + RV L ELPNL N I    +  +K+K + V     + LN+   +   D      +    V+ ++EYL ++E+  K RP+VDY+EK+QK VT  MR +LVDWLVEV EEYKLL DTL+L+VSYIDRFLS+  V K +LQLLGV+SMLIASKYEE+ PP V+DFC ITD TY K E+VKMEADIL +L FE+GNPT NTFLRRF  VA ++   ++ Q+EFL  YL+ELS+LDY  ++FLPS VAASAVFL+RFI+ P+ HPW   L E + YK  +LKECV  +HDLYL RK  + +A+R KYKQ KFKCVA +P  P +    FED
Sbjct:   12 TRAATKRKASMEAAIDKERINKKRVVLGELPNLSN-IKKSRKATTKQKKKSVSIPTIETLNSDIDTRSDDP----QMCGPYVTSIFEYLRQLEV--KSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVAEEYKLLSDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYITDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHDLYLSRKCGALEAIREKYKQHKFKCVATMPVSPELPLTVFED 352          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA34_ARATH (Cyclin-A3-4 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-4 PE=1 SV=1)

HSP 1 Score: 324.324 bits (830), Expect = 2.424e-108
Identity = 183/354 (51.69%), Postives = 243/354 (68.64%), Query Frame = 1
Query:    7 TRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEKSRGVKNLN------AXXXXXXXXXXXXFHID----ESIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIAS-KYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            TRAA+KRKA++M L +    K+ RV L ELPN+ N++    Q     K++   N +      A      S    S  +D    E   SD+  YL EME + K RP+ DY+EKVQ  +TP MRA+LVDWLVEV EEYKL+ DTL+L++SY+DRFLS+ P+ + KLQL+GVS+MLIAS KYEE+ PP V DFC ITD T+ K EVV MEADIL +L FE+G+PT+ TFLRRF  VA ++   +  QIEFL  YL+ELS+LDY  +++LPS+++ASAVFL+RFI+ P+ HPW   L E + YK ++L+ CV  +HDLYL R+  + +AVRNKYKQ K+KCVA +P  P +   +FED
Sbjct:   11 TRAAAKRKASSMALDENPVSKK-RVVLGELPNMSNVVAVPNQERETLKAKTSVNTSKRQMKKALMIPEASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLSRRGNTLEAVRNKYKQHKYKCVATMPVSPELPLAFFED 363          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA32_ARATH (Cyclin-A3-2 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 1.578e-106
Identity = 177/359 (49.30%), Postives = 240/359 (66.85%), Query Frame = 1
Query:    7 TRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEKSRGVKNLNAXXXXXXXXXXXXFHIDES----------------IVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            TRAA+KRKA+  + +      + RV L EL N+ N+ +    N  KE  +  +NL             +    ES                 V+D+YEYL ++E++ K+RP+ DY+EKVQK VTP+MR +LVDWLVEV EEYKL  +TL+L+VS+IDRFLS+  V K KLQL+GVS+MLIASKYEE+ PP V+DFC ITD T+ K +VVKMEADIL +L FE+G PT+NTF+RRF  VA D+    + Q+E L  YL+ELS+LDY  ++F+PS++AASAVFL+RFI+ P+ HPW   L E + YK ++L+ CV  +HDLYL R+  + +AVR KYK  KF+CVA +P  P +   ++ED
Sbjct:   11 TRAAAKRKASTAMGIDGDRVNKKRVVLGELLNVSNVNLLANLNQKKETQKPKRNLKPPPAKQIKSAPVAIIDLESKSDIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEYKLGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFCYITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCYLSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLSRRGGALQAVREKYKHHKFQCVATMPVSPELPVTFWED 369          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCNAL_DAUCA (G2/mitotic-specific cyclin C13-1 (Fragment) OS=Daucus carota OX=4039 PE=2 SV=1)

HSP 1 Score: 298.901 bits (764), Expect = 8.308e-99
Identity = 158/267 (59.18%), Postives = 198/267 (74.16%), Query Frame = 1
Query:  235 VSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            VSD+YEYL +MEM+ KRRPM++Y+E+VQK VT  MR +LVDWLVEV  EYKLLP+TL+L++SY+DR+LS+N + + KLQLLGVSS LIASKYEE+ P  V DF  ITD TY + EVVKMEAD+LK+L FEMG+PTV TFL  F     +N      + EFL  YLAELSLLDY  L F+PS++AAS  FL+RF + P V+PW+ +L +CSGYK  +LKECVL LHDL + R+  S  AVR+KYK+ KFKCV+ L   P +    F D
Sbjct:   75 VSDVYEYLKQMEMETKRRPMMNYIEQVQKDVTSNMRGVLVDWLVEVSLEYKLLPETLYLAISYVDRYLSVNVLNRQKLQLLGVSSFLIASKYEEIKPKNVADFVDITDNTYSQQEVVKMEADLLKTLKFEMGSPTVKTFL-GFIRAVQENPDVPKLKFEFLANYLAELSLLDYGCLEFVPSLIAASVTFLARFTIRPNVNPWSIALQKCSGYKSKDLKECVLLLHDLQMGRRGGSLSAVRDKYKKHKFKCVSTLSPAPEIPESIFND 340          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA32_ORYSJ (Cyclin-A3-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-2 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 2.433e-89
Identity = 169/340 (49.71%), Postives = 225/340 (66.18%), Query Frame = 1
Query:   67 KRHRVALAELPNLPNLIVPGTQNP---------SKEKSRGVKNLNAXXXXXXXXXXXXFHI--------DESIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            KR RVAL++LP L N +V   + P         SK+     +          S  SS+           D    SD+Y YL  ME++ +R+   DY+E VQ  VT  MRAILVDWLVEV +EYKL+ DTL+L+VSY+DR+LS +P+ +++LQLLGV +MLIA+KYEE+ PP V DFC ITD TY + EVVKME+DILK L FEMGNPT+ TFLRRF     ++K  ++  +EF+G YLAELSLLDY  LRFLPSVVAAS VF+++  + P  +PW+  + + +GYK SELK+C+L +HDL L +K ++  A+R+KYKQ KFKCV+ L  P  +   Y +D
Sbjct:   43 KRKRVALSDLPTLSNAVVVAPRQPHHPVVIKPSSKQPEPAAEAAAPSGGGGGSPVSSASTSTASPSSGWDPQYASDIYTYLRSMEVEARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLYLAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEVVKMESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCLRFLPSVVAASVVFVAKLNIDPYTNPWSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNLTAIRDKYKQHKFKCVSTLLPPVDIPASYLQD 382          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA33_ARATH (Cyclin-A3-3 OS=Arabidopsis thaliana OX=3702 GN=CYCA3-3 PE=2 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 1.978e-88
Identity = 147/267 (55.06%), Postives = 196/267 (73.41%), Query Frame = 1
Query:  235 VSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            VSD+YEYL E+E++ K RP+ DY+EK+Q+ +TP+ R +LVDWLVEV EE++L+ +TL+L+VSYIDRFLS+  V +  LQL+GVS+M IASKYEE   P V DFC IT  TY K +V+KME DIL +L FE+G PT NTFLRRF  VA ++    N Q+E L  YL+ELS+LDY  ++F+PS++AASAVFL+RFI+ P  HPW+  L EC+ YK ++L+ CV  + DLYL R   + KAVR KYKQ KF+ VA +P    +   ++ED
Sbjct:   57 VSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLVEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIMLDLYLSRSEGASKAVREKYKQHKFQYVAAIPVYQELPVTFWED 323          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA31_ORYSJ (Cyclin-A3-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA3-1 PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 1.655e-86
Identity = 154/267 (57.68%), Postives = 189/267 (70.79%), Query Frame = 1
Query:  235 VSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
             SD+  YL  ME+Q KRRP  DY+E VQ  VT  MR ILVDWLVEV EEYKL+ DTL+L+VSYIDRFLS   + + KLQLLGVS+MLIASKYEE+ PP V DFC ITD TY K EVVKME DIL  L FEMGNPT  TFLR F   + ++    +  +EF+  YLAELSLL+Y  +R LPSVVAAS VF++R  +  + +PW+  L E +GY+ SELK+C+  +HDL L RK +S  A+R+KYKQ +FK V+ L  P  +   YFED
Sbjct:  104 ASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYLTVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMKQEVVKMERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLLPSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSLMAIRDKYKQHRFKGVSTLLPPVEIPASYFED 370          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA11_ORYSJ (Cyclin-A1-1 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-1 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 2.748e-80
Identity = 137/269 (50.93%), Postives = 188/269 (69.89%), Query Frame = 1
Query:  229 SIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            ++ SD+Y +L E E +K  RP  D++E +QK V P+MRAIL+DWLVEV EEY+L+PDTL+L+V+YIDR+LS N + + +LQLLGV+ MLIA+KYEE+  P V +FC ITD TY + EV++MEA +L  L FE+  PT   FLRRF  VA  +       +EFL  Y+AELSLL+Y+LL + PS+VAASA+FL++FI+ P  HPW  +L+  + YK SEL +CV  LH L+ +   ++  A+R KY Q K+K VA  P PP +   +F D
Sbjct:  239 TLASDIYMHLREAETRK--RPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFRD 505          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA13_ORYSJ (Cyclin-A1-3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-3 PE=2 SV=2)

HSP 1 Score: 253.447 bits (646), Expect = 3.760e-79
Identity = 136/269 (50.56%), Postives = 187/269 (69.52%), Query Frame = 1
Query:  229 SIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            ++ SD+Y +L E E +K   P  D++E +QK V P+MRAIL+DWLVEV EEY+L+PDTL+L+V+YIDR+LS N + + +LQLLGV+ MLIA+KY+E+  P V +FC ITD TY + EV++MEA +L  L FEM  PT   FLRRF  VA  +       +EFL  Y+AELSLL+Y+LL + PS+VAASA+FL++FI+ P  HPW  +L+  + YK SEL +CV  LH L+ +   ++  A+R KY Q K+K VA  P PP +   +F D
Sbjct:  222 TLASDIYMHLREAETRK--HPSTDFMETLQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYKEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEMTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPAKHPWNSTLAHYTQYKSSELSDCVKALHRLFCVGPGSNLPAIREKYTQHKYKFVAKKPCPPSIPTEFFRD 488          
BLAST of Vigun09g234100.1 vs. DB:Swiss
Match: CCA12_ORYSJ (Cyclin-A1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCA1-2 PE=3 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 8.180e-77
Identity = 137/269 (50.93%), Postives = 187/269 (69.52%), Query Frame = 1
Query:  229 SIVSDLYEYLHEMEMQKKRRPMVDYLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINPVTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEADILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYXXXXXXXXXXXXXXXPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVLTLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFED 1035
            ++ SD+Y +L E E +K  RP  D++E +QK V P+MRAIL+DWLVEV EEY+L+PDTL+L+V+YIDR+LS N + + +LQLLGV+ MLIA+KYEE+  P V +FC ITD TY + EV++MEA +L  L FE+  PT   FLRRF  VA  +       +EFL  Y+AELSLL+Y+LL + PS+VAASA+FL++FI+ P  HPW  +L+  + YK SEL +CV  LH L+ +   ++  A+R KY Q K K VA    PP V + +F D
Sbjct:  209 TLASDIYMHLREAETRK--RPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHPWNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHK-KFVAKKHCPPSVPSEFFRD 474          
The following BLAST results are available for this feature:
BLAST of Vigun09g234100.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CCA31_ARATH7.306e-11554.60Putative cyclin-A3-1 OS=Arabidopsis thaliana OX=37... [more]
CCA34_ARATH2.424e-10851.69Cyclin-A3-4 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCA32_ARATH1.578e-10649.30Cyclin-A3-2 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCNAL_DAUCA8.308e-9959.18G2/mitotic-specific cyclin C13-1 (Fragment) OS=Dau... [more]
CCA32_ORYSJ2.433e-8949.71Cyclin-A3-2 OS=Oryza sativa subsp. japonica OX=399... [more]
CCA33_ARATH1.978e-8855.06Cyclin-A3-3 OS=Arabidopsis thaliana OX=3702 GN=CYC... [more]
CCA31_ORYSJ1.655e-8657.68Cyclin-A3-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCA11_ORYSJ2.748e-8050.93Cyclin-A1-1 OS=Oryza sativa subsp. japonica OX=399... [more]
CCA13_ORYSJ3.760e-7950.56Cyclin-A1-3 OS=Oryza sativa subsp. japonica OX=399... [more]
CCA12_ORYSJ8.180e-7750.93Cyclin-A1-2 OS=Oryza sativa subsp. japonica OX=399... [more]
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 216..304
e-value: 8.0E-18
score: 75.2
coord: 119..203
e-value: 1.1E-25
score: 101.3
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 113..202
e-value: 2.77142E-23
score: 89.9904
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 212..303
e-value: 2.23695E-14
score: 65.7228
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 212..335
e-value: 7.4E-40
score: 148.4
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 212..334
e-value: 3.5E-32
score: 111.0
NoneNo IPR availableGENE3D1.10.472.10coord: 83..330
e-value: 1.3E-93
score: 314.7
NoneNo IPR availableGENE3D1.10.472.10coord: 97..210
e-value: 1.3E-93
score: 314.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 38..52
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 81..209
e-value: 9.4E-41
score: 138.5
IPR006671Cyclin, N-terminalPROSITEPS00292CYCLINScoord: 114..145
IPR039361CyclinPIRSFPIRSF001771Cyclin_A_B_D_Ecoord: 2..341
e-value: 1.9E-100
score: 335.1
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 212..336
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 79..209

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g234100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g234100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g234100.1; organism=Vigna unguiculata; type=mRNA; length=2131bp
AAAGAAGCGTCCCTTCCCGCCATGTGAAAATTCTCTTCTTTTTCTACGCA
AACCCTAAACCACACTATACCTTTTGAATTTGGAACCAAAACGAAATCTC
AAAATTTTCACCCACGCCAACTCCCAAAATTTTCAGACACACTAATTCAT
TTTGGAAACCCTCCAATCTCTATTCCCATTATACATAAACATGGCACCAA
TCTCTCTTCCCCACCAAAAACTCCAAGTCCATCTTCTTCCTTCTGTCTGT
TCTCTCCCTCTCTTCCAAATTCATACCACAGAAGGAACAAGATGGAGACT
CGTGCTGCCTCAAAGAGAAAGGCAAATGCAATGGTCTTGGTCCAAAAACA
ACACCCCAAAAGGCATAGGGTTGCGTTGGCTGAACTCCCCAATTTACCAA
ATCTTATTGTCCCAGGAACTCAGAATCCTTCCAAAGAGAAATCGCGAGGT
GTGAAGAATCTCAATGCGAAGAAGCCATCTCCCAAATCTGACCACTCTTC
TTCCTTCCATATAGATGAATCCATTGTTTCCGATCTCTATGAGTATCTTC
ATGAAATGGAGATGCAGAAAAAGAGGAGACCAATGGTTGACTACCTTGAG
AAAGTGCAGAAACTAGTTACACCTACCATGAGAGCAATCTTGGTGGATTG
GTTAGTAGAAGTGGGTGAGGAGTACAAACTTCTTCCGGACACTCTTCATC
TCTCTGTTTCATACATTGATAGGTTTTTGTCCATTAATCCTGTGACTAAA
TCGAAACTTCAGTTACTTGGTGTTTCCTCCATGCTCATTGCATCCAAATA
CGAGGAAATGGATCCACCTTGTGTGAATGATTTTTGCAGTATCACTGATT
ACACATATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGACATACTAAAG
TCACTAAACTTTGAAATGGGAAATCCTACTGTGAATACCTTTCTCAGGAG
GTTTGCTGATGTTGCTTCTGATAACAAATTGACTACAAATTCACAGATTG
AATTTTTGGGACGCTATCTGGCTGAGCTAAGTTTGCTGGACTATGATTTG
TTGAGATTTTTGCCTTCTGTTGTGGCAGCGTCAGCTGTATTTCTTTCCAG
ATTTATTGTCTCGCCTGAAGTGCATCCATGGACCCCTTCTTTGAGTGAAT
GCTCGGGTTACAAACCATCTGAATTGAAAGAATGTGTCCTAACCTTGCAT
GACCTATACTTGTTACGAAAAGCAGCGTCTTTCAAAGCTGTCCGGAATAA
GTACAAGCAGCAAAAGTTTAAATGTGTTGCAAACCTGCCTTCCCCTCCTT
ATGTACTGAATTGTTACTTTGAAGACCAGTGATGCAGCAAATTTCATGAT
GAATATATATCTCAGTTGCTATCTCTTAAATCATGTTTGATAGAGCACAT
GTCAAAAGTGTGGTTAGTTTGATCATTGTTTGAACACACCTGGCGTTAGA
AATTTTATGCATAGATTTGTCTTTAAAGTGCAAGATCGGCAGGTAGATAA
GATATCAATGCTCAATTGCCTTTTCTGTTGAACAACCATGGAGAAGACCT
CTAAAGATGCAAACGGCTTCATTAACATCGTAGATTGTACAGCTTCTTTG
TCATCATTGATGCTTACTGCTGAACAATCATGATAGTTTTTCAATAGTAT
GATTTAGGAGGATGAGGCTAAACTTGTGTAGTTCATTGCATAGAATTTTA
TATGAACAAAGTCCCCATGTCAAAAATCGTCATTGGGATCTTGCGAGATG
TCTTTGGTATCATTAATCCGAGAAATGGCTGCAATCTTGAGAGTTTGTGC
TTCAATCAATAAAGAATGAGGGTTTTACTGTGCTTCTAGACAGCAAACCA
GGAGTGTTGATCTTGGGATTTAGGGATGTTGTCAGCAATAAATTTGAATT
TTGTTCATCATCTATCAAGCTGTGGTCATGGCGCGAAGGAGTTTTAGATG
AAGAGAAAGTAGCGAAAACAAACATTAGAATTTTTGTTTAGAATATCTTT
CTGGTTGGTTGAAAATGTCCTATTCTTTAGGGATATTTATTAATATTTGT
TTTTTATCATTTTTTTTTTGTTAACATTCACATTTACATTTGTTTATCCA
AGCATACTCTAATAAAAGTGTCATTCATTCT
back to top

protein sequence of Vigun09g234100.1_Vu_IT97K-499-35_v1.1

>Vigun09g234100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g234100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g234100.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=347bp
METRAASKRKANAMVLVQKQHPKRHRVALAELPNLPNLIVPGTQNPSKEK
SRGVKNLNAKKPSPKSDHSSSFHIDESIVSDLYEYLHEMEMQKKRRPMVD
YLEKVQKLVTPTMRAILVDWLVEVGEEYKLLPDTLHLSVSYIDRFLSINP
VTKSKLQLLGVSSMLIASKYEEMDPPCVNDFCSITDYTYDKAEVVKMEAD
ILKSLNFEMGNPTVNTFLRRFADVASDNKLTTNSQIEFLGRYLAELSLLD
YDLLRFLPSVVAASAVFLSRFIVSPEVHPWTPSLSECSGYKPSELKECVL
TLHDLYLLRKAASFKAVRNKYKQQKFKCVANLPSPPYVLNCYFEDQ*
back to top

mRNA from alignment at Vu09:40481812..40484602-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g234100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g234100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g234100.1; organism=Vigna unguiculata; type=mRNA; length=2791bp; location=Sequence derived from: Vu09:40481812..40484602- (Vigna unguiculata
AAAGAAGCGTCCCTTCCCGCCATGTGAAAATTCTCTTCTTTTTCTACGCA AACCCTAAACCACACTATACCTTTTGAATTTGGAACCAAAACGAAATCTC AAAATTTTCACCCACGCCAACTCCCAAAATTTTCAGACACACTAATTCAT TTTGGAAACCCTCCAATCTCTATTCCCATTATACATAAACATGGCACCAA TCTCTCTTCCCCACCAAAAACTCCAAGTCCATCTTCTTCCTTCTGTCTGT TCTCTCCCTCTCTTCCAAATTCATACCACAGAAGGAACAAGATGGAGACT CGTGCTGCCTCAAAGAGAAAGGCAAATGCAATGGTCTTGGTCCAAAAACA ACACCCCAAAAGGCATAGGGTTGCGTTGGCTGAACTCCCCAATTTACCAA ATCTTATTGTCCCAGGAACTCAGAATCCTTCCAAAGAGAAATCGCGAGGT GTGAAGAATCTCAATGCGAAGAAGCCATCTCCCAAATCTGACCACTCTTC TTCCTTCCATATAGATGAATCCATTGTTTCCGATCTCTATGAGTATCTTC ATGAAATGGAGGTAATTTTGATTTCTTCACATTAACAAACTCTTAATCTT GTTTTTGAGAATTTCAGGTATCTCAGTTTTAAATTTCGTTTTTCTCAGAT GCAGAAAAAGAGGAGACCAATGGTTGACTACCTTGAGAAAGTGCAGAAAC TAGTTACACCTACCATGAGAGCAATCTTGGTGGATTGGTTAGTAGAAGTG GGTGAGGAGTACAAACTTCTTCCGGACACTCTTCATCTCTCTGTTTCATA CATTGATAGGTTTTTGTCCATTAATCCTGTGACTAAATCGAAACTTCAGT TACTTGGTGTTTCCTCCATGCTCATTGCATCGTAAGGCTGCTGCTGATAC TTTTTTTTTTATGTTGTTCAATATTTGTTCTCTTTAACTTACTTCAAAAT TACAATTGTGTCTTTTTAATGTGTAGCAAATACGAGGAAATGGATCCACC TTGTGTGAATGATTTTTGCAGTATCACTGATTACACATATGACAAGGCAG AGGTAAAGATACAATGCTATTCTATTTTTGAGAGCACCAAATTGATTTCT TGTTTGTGATTTGTCTTTTTTATAACTCTTTGGTTTTCATGGCTACTGAT TATATATATTCATATATGTATATATAGGTTGTTAAGATGGAAGCTGACAT ACTAAAGTCACTAAACTTTGAAATGGGAAATCCTACTGTGAATACCTTTC TCAGGTAAGGACTGAGAATTGTGAATATGAATATTTCACCTCTTTTGACA TGAAATTAATTAAGTGTTTATTTATTCAGGAGGTTTGCTGATGTTGCTTC TGATAACAAATTGGTAAGTTAAACTGCTCCACCAATTGTTATTCATTGAC TTAAAAGCTTCATTGTGTTGTTTACTAATTGCTTTCCTTTTATTTGTTAT TTCAGACTACAAATTCACAGATTGAATTTTTGGGACGCTATCTGGCTGAG CTAAGTTTGCTGGACTATGATTTGTTGAGATTTTTGCCTTCTGTTGTGGC AGCGTCAGCTGTATTTCTTTCCAGATTTATTGTCTCGCCTGAAGTGCATC CATGGGTTAGTATTTTCATGTTATGACTAGTTATACGGGGATCTTTGAAA TAATTTGAGCTATTAGCCTTTATTCAAGATACTTACAGTTGAAAACCTAT TCCAGACCCCTTCTTTGAGTGAATGCTCGGGTTACAAACCATCTGAATTG AAAGAATGTGTCCTAACCTTGCATGACCTATACTTGTTACGAAAAGCAGC GTCTTTCAAAGCTGTCCGGAATAAGTACAAGCAGCAAAAGGTGATTATTT TTGTATTTGTTTAGTTATTAAGTATCTAATTCTCATTGTAACAAATGGAT TGACCTGAAATATTTTACTGGAACAGTTTAAATGTGTTGCAAACCTGCCT TCCCCTCCTTATGTACTGAATTGTTACTTTGAAGACCAGTGATGCAGCAA ATTTCATGATGAATATATATCTCAGTTGCTATCTCTTAAATCATGTTTGA TAGAGCACATGTCAAAAGTGTGGTTAGTTTGATCATTGTTTGAACACACC TGGCGTTAGAAATTTTATGCATAGATTTGTCTTTAAAGTGCAAGATCGGC AGGTAGATAAGATATCAATGCTCAATTGCCTTTTCTGTTGAACAACCATG GAGAAGACCTCTAAAGATGCAAACGGCTTCATTAACATCGTAGATTGTAC AGCTTCTTTGTCATCATTGATGCTTACTGCTGAACAATCATGATAGTTTT TCAATAGTATGATTTAGGAGGATGAGGCTAAACTTGTGTAGTTCATTGCA TAGAATTTTATATGAACAAAGTCCCCATGTCAAAAATCGTCATTGGGATC TTGCGAGATGTCTTTGGTATCATTAATCCGAGAAATGGCTGCAATCTTGA GAGTTTGTGCTTCAATCAATAAAGAATGAGGGTTTTACTGTGCTTCTAGA CAGCAAACCAGGAGTGTTGATCTTGGGATTTAGGGATGTTGTCAGCAATA AATTTGAATTTTGTTCATCATCTATCAAGCTGTGGTCATGGCGCGAAGGA GTTTTAGATGAAGAGAAAGTAGCGAAAACAAACATTAGAATTTTTGTTTA GAATATCTTTCTGGTTGGTTGAAAATGTCCTATTCTTTAGGGATATTTAT TAATATTTGTTTTTTATCATTTTTTTTTTGTTAACATTCACATTTACATT TGTTTATCCAAGCATACTCTAATAAAAGTGTCATTCATTCT
back to top

Coding sequence (CDS) from alignment at Vu09:40481812..40484602-

>Vigun09g234100.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g234100.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g234100.1; organism=Vigna unguiculata; type=CDS; length=1041bp; location=Sequence derived from: Vu09:40481812..40484602- (Vigna unguiculata
ATGGAGACTCGTGCTGCCTCAAAGAGAAAGGCAAATGCAATGGTCTTGGT
CCAAAAACAACACCCCAAAAGGCATAGGGTTGCGTTGGCTGAACTCCCCA
ATTTACCAAATCTTATTGTCCCAGGAACTCAGAATCCTTCCAAAGAGAAA
TCGCGAGGTGTGAAGAATCTCAATGCGAAGAAGCCATCTCCCAAATCTGA
CCACTCTTCTTCCTTCCATATAGATGAATCCATTGTTTCCGATCTCTATG
AGTATCTTCATGAAATGGAGATGCAGAAAAAGAGGAGACCAATGGTTGAC
TACCTTGAGAAAGTGCAGAAACTAGTTACACCTACCATGAGAGCAATCTT
GGTGGATTGGTTAGTAGAAGTGGGTGAGGAGTACAAACTTCTTCCGGACA
CTCTTCATCTCTCTGTTTCATACATTGATAGGTTTTTGTCCATTAATCCT
GTGACTAAATCGAAACTTCAGTTACTTGGTGTTTCCTCCATGCTCATTGC
ATCCAAATACGAGGAAATGGATCCACCTTGTGTGAATGATTTTTGCAGTA
TCACTGATTACACATATGACAAGGCAGAGGTTGTTAAGATGGAAGCTGAC
ATACTAAAGTCACTAAACTTTGAAATGGGAAATCCTACTGTGAATACCTT
TCTCAGGAGGTTTGCTGATGTTGCTTCTGATAACAAATTGACTACAAATT
CACAGATTGAATTTTTGGGACGCTATCTGGCTGAGCTAAGTTTGCTGGAC
TATGATTTGTTGAGATTTTTGCCTTCTGTTGTGGCAGCGTCAGCTGTATT
TCTTTCCAGATTTATTGTCTCGCCTGAAGTGCATCCATGGACCCCTTCTT
TGAGTGAATGCTCGGGTTACAAACCATCTGAATTGAAAGAATGTGTCCTA
ACCTTGCATGACCTATACTTGTTACGAAAAGCAGCGTCTTTCAAAGCTGT
CCGGAATAAGTACAAGCAGCAAAAGTTTAAATGTGTTGCAAACCTGCCTT
CCCCTCCTTATGTACTGAATTGTTACTTTGAAGACCAGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR006670Cyclin
IPR036915Cyclin-like_sf
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus