Vigun09g240200.1

Transcript Overview
NameVigun09g240200.1
Unique NameVigun09g240200.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length1966
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu09supercontigVu09:41014053..41018145 +Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL376Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL109Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL495Pisum sativum Cameor genome v1aPisum sativum
pvvuL067Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
crvuL452Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crvuL926Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL801Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL346Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL434Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0621Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL562Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
cavuL694Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0055Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1130Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1304Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0122Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0321Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0372Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0761Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0921Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1019Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL079Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL203Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR672Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR698Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR711Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL332Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL308Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL460Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL434Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vrvvuL397Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL459Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL421Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL589Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL593Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR449Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR463Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL315Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL403Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL531Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL478Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL605Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL331Cicer arietinum
carvuL418Cicer arietinum
carvuL531Cicer arietinum
carvuL661Cicer arietinum
ccavuL067Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL437Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL554Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR734Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR750Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR760Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR773Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR785Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR815Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR836Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL247Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL293Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL265Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL308Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL065Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL707Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR520Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR527Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
jg29272.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
jg54894.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004505139.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vigst.02G035200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
XM_058927185.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Phvul.001G019600.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
PvulFLAVERTChr01.1000155Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Vfaba.Hedin2.R1.3g225760.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat07G0316700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Ca_06431Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vum_02G00362.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan09g018600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vigan.03G275000.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigan.02G042400.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vfaba.Hedin2.R1.2g164000.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-TanjilR_30581Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cr_09392.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Va07G069130.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_020572Cajanus cajan Asha genome v1.0Cajanus cajan
Ca_19242Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Cc_v2.0_00939.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
XM_058874759.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vum_03G01935.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat05G0151000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Cr_02770.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
XM_058866258.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Vfaba.Tiffany.R1.2g132200.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_014649074.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-TanjilR_14666Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
rna-KK1_019135Cajanus cajan Asha genome v1.0Cajanus cajan
Phvul.009G063200.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
evm.model.Chr09.1357Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va04G068380.3Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
LR48_mrnaVigan01g330400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_004501532.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_15134.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vfaba.Tiffany.R1.3g184600.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-XM_004499027.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
jg35280.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Ca_01529Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr08.523Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.03G175000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-XM_014646559.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-KK1_027300Cajanus cajan Asha genome v1.0Cajanus cajan
Psat06G0029700-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
rna-TanjilR_24485Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
PvulFLAVERTChr09.1000414Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_15286.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun08g021200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun08g021200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun09g240200.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun09g240200Vigun09g240200_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g240200.1Vigun09g240200.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun09g240200.1_Vu_IT97K-499-35_v1.1Vigun09g240200.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g240200.1.v1.1.five_prime_UTR.1Vigun09g240200.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g240200.1.v1.1.CDS.1Vigun09g240200.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g240200.1.v1.1.CDS.2Vigun09g240200.1.v1.1.CDS.2_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g240200.1.v1.1.CDS.3Vigun09g240200.1.v1.1.CDS.3_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g240200.1.v1.1.CDS.4Vigun09g240200.1.v1.1.CDS.4_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g240200.1.v1.1.CDS.5Vigun09g240200.1.v1.1.CDS.5_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS
Vigun09g240200.1.v1.1.CDS.6Vigun09g240200.1.v1.1.CDS.6_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun09g240200.1.v1.1.three_prime_UTR.1Vigun09g240200.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RB47C_ARATH (Polyadenylate-binding protein RBP47C OS=Arabidopsis thaliana OX=3702 GN=RBP47C PE=2 SV=1)

HSP 1 Score: 422.165 bits (1084), Expect = 9.937e-145
Identity = 220/313 (70.29%), Postives = 250/313 (79.87%), Query Frame = 1
Query:  229 PHVSHAHHQGS--------SAENKTVWVGDLHHWMDENYLHRCFATTGE--ISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKR-SDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXX--XXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRGELGSPW 1128
            P+  H HHQ          + ENKT+WVGDLHHWMDE YL+  FA+  E  I S+KVIRNK  GLSEGYGFVEF SH  A+KVL+ +    MPNT+QPFRLNWASFSTG+KR  +N PDLSIFVGDL+ DV+D++LHETFS +YPSVKAAKVV DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATPRKT+GYQQ      NGT  + E D  NTTIFVGGLD +VT EDL+QPF+++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQ VRLSWGRNPANKQ R + G+ W
Sbjct:   78 PNHHHLHHQSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEGYGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 390          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RBP47_NICPL (Polyadenylate-binding protein RBP47 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP47 PE=1 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 2.241e-144
Identity = 200/305 (65.57%), Postives = 242/305 (79.34%), Query Frame = 1
Query:  253 QGSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRK-------------XXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRGELGSPW 1128
            Q SS +NKT+W+GDL  WMDE+YLH CF+  GE+ S+K+IRNKQTG SE YGFVEF +H  AEKVLQ+Y   +MPNTEQPFRLNWA FSTG+KR++   D SIFVGDLA+DVTD+ML +TF++RYPS+K AKVV DANTG SKGYGFVRFGD++ERS+AMTEMNGVYCSSR MRIG ATP+K              SG    + +    +QS+ DS+NTTIFVGGLD  VT E+LRQ F+Q+GE+VSVKIP GKGCGFVQF++R++A+EA+QKL+G  IGKQ VRLSWGR+PANKQ R + GS W
Sbjct:   77 QSSSEDNKTIWIGDLQQWMDESYLHSCFSQAGEVISVKIIRNKQTGQSERYGFVEFNTHAAAEKVLQSYNGTMMPNTEQPFRLNWAGFSTGEKRAETGSDFSIFVGDLASDVTDTMLRDTFASRYPSLKGAKVVVDANTGHSKGYGFVRFGDESERSRAMTEMNGVYCSSRAMRIGVATPKKPSAHEQYSSQAVILSGGYASNGAATHGSQSDGDSSNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGAIIGKQAVRLSWGRSPANKQMRTDSGSQW 381          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: R47CP_ARATH (Polyadenylate-binding protein RBP47C' OS=Arabidopsis thaliana OX=3702 GN=RBP47C' PE=2 SV=1)

HSP 1 Score: 418.313 bits (1074), Expect = 3.396e-143
Identity = 219/313 (69.97%), Postives = 248/313 (79.23%), Query Frame = 1
Query:  229 PHVSHAHHQGS--------SAENKTVWVGDLHHWMDENYLHRCF--ATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKR-SDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXX--XXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRGELGSPW 1128
            P+  H HHQ          + ENKT+WVGDL +WMDE YL+  F  A   EI S+KVIRNK  G SEGYGFVEF SH  A+KVLQ +    MPNT+QPFRLNWASFSTG+KR  +N PDLSIFVGDLA DV+D++LHETFS +YPSVKAAKVV DANTGRSKGYGFVRFGD+NER++AMTEMNGV CSSR MRIG ATPRKT+GYQQ      +G   +SE D+ NTTIFVGGLD +VT EDL+QPFS++GEIVSVKIPVGKGCGFVQF NR NAEEAL+KLNGT IGKQ VRLSWGRNPANKQ R + G+ W
Sbjct:   80 PNHHHFHHQSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRDKYGNQW 392          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RB47B_ARATH (Polyadenylate-binding protein RBP47B OS=Arabidopsis thaliana OX=3702 GN=RBP47B PE=2 SV=1)

HSP 1 Score: 410.994 bits (1055), Expect = 2.192e-140
Identity = 201/307 (65.47%), Postives = 243/307 (79.15%), Query Frame = 1
Query:  253 QGSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKRS-DNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXX--------------XXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRGELGSPW 1128
            +GS  + KT+WVGDL HWMDE YLH CF+ TGE+SS+KVIRNK T  SEGYGFVEF S   AE+VLQ Y   +MPN++QPFR+NWASFSTG+KR+ +N PDLS+FVGDL+ DVTD +LHETFS+RYPSVK+AKVV D+NTGRSKGYGFVRFGD+NERS+A+TEMNG YCS+R MR+G ATP++    QQ   S                  +QS+ +STN TIFVGG+DP+V  EDLRQPFSQ+GE+VSVKIPVGKGCGFVQFA+R +AE+A++ LNGT IGK  VRLSWGR+P NKQ+RG+ G  W
Sbjct:  101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQHSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGRSP-NKQWRGDSGQQW 406          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RB47A_ARATH (Polyadenylate-binding protein RBP47A OS=Arabidopsis thaliana OX=3702 GN=RBP47A PE=2 SV=1)

HSP 1 Score: 400.593 bits (1028), Expect = 5.032e-136
Identity = 198/295 (67.12%), Postives = 235/295 (79.66%), Query Frame = 1
Query:  274 KTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKR-SDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXX---------XXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRGELGSPW 1128
            KT+WVGDL HWMDE YLH CF+ T E+SS+KVIRNKQT  SEGYGFVEF S   AE+ LQ++  + MPN EQPFRLNWASFSTG+KR S+N PDLSIFVGDLA DV+D++L ETF+ RYPSVK AKVV D+NTGRSKGYGFVRFGD+NERS+AMTEMNG +CSSR MR+G ATP++ + Y Q + S   +         + S+ +S N+TIFVGGLD +VT EDL QPFS +GE+VSVKIPVGKGCGFVQFANR +AEEA+  LNGT IGK  VRLSWGR+P NKQ+R + G+ W
Sbjct:  119 KTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIATPKRAAAYGQQNGSQALTLAGGHGGNGSMSDGESNNSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSP-NKQWRSDSGNQW 412          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RBP45_NICPL (Polyadenylate-binding protein RBP45 OS=Nicotiana plumbaginifolia OX=4092 GN=RBP45 PE=1 SV=1)

HSP 1 Score: 345.125 bits (884), Expect = 7.377e-115
Identity = 172/283 (60.78%), Postives = 209/283 (73.85%), Query Frame = 1
Query:  256 GSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKXXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQ 1101
            G+  E +++W+GDL +WMDENYL  CF  TGE+ S KVIRNKQTG SEGYGF+EF SH  AE +LQTY   LMPN EQ FR+NWAS   G++R D+  + +IFVGDLAADVTD +L ETF + Y SV+ AKVV D  TGRSKGYGFV+F D++E+ +AMTEMNGV CS+RPMRIG AA  +     Q+ +  N  + Q E+D  NTTIFVGGLDP V  E LRQ FS YGE+V VKI  GK CGFVQF  R +AE+AL  LNGT +G Q +RLSWGR+P++KQ
Sbjct:   78 GNPNEVRSLWIGDLQYWMDENYLSTCFYHTGELVSAKVIRNKQTGQSEGYGFLEFRSHAAAETILQTYNGTLMPNVEQNFRMNWASLGAGERRDDSA-EHTIFVGDLAADVTDYILQETFKSVYSSVRGAKVVTDRITGRSKGYGFVKFADESEQLRAMTEMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTIFVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGGQSIRLSWGRSPSSKQ 359          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RP45C_ARATH (Polyadenylate-binding protein RBP45C OS=Arabidopsis thaliana OX=3702 GN=RBP45C PE=2 SV=1)

HSP 1 Score: 344.739 bits (883), Expect = 1.427e-114
Identity = 169/282 (59.93%), Postives = 204/282 (72.34%), Query Frame = 1
Query:  256 GSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQ 1101
            GS+ E +++W+GDL  WMDENYL   F  TGE ++ KVIRNKQ G SEGYGF+EF +H TAE+ LQTY    MP++EQ FRLNWA    G++R    P+ ++FVGDLA DVTD ML ETF   Y SVK AKVV D  TGRSKGYGFVRF D++E+ +AMTEMNG YCSSRPMR G A  +K    Q  S  N   N  E+D TNTTIFVG +D +VT +DL+  F Q+GE+V VKIP GK CGFVQ+ANR  AE+AL  LNGT +G Q +RLSWGR+P+NKQ
Sbjct:   74 GSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQ 355          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RB45B_ARATH (Polyadenylate-binding protein RBP45B OS=Arabidopsis thaliana OX=3702 GN=RBP45B PE=1 SV=1)

HSP 1 Score: 341.658 bits (875), Expect = 1.777e-113
Identity = 173/280 (61.79%), Postives = 213/280 (76.07%), Query Frame = 1
Query:  268 ENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPN-TEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRK-XXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQ 1101
            E +T+W+GDL +WMDEN+L+ CFA TGE+ S KVIRNKQTG  EGYGF+EF SH  AE+VLQT+    +P+  +Q FRLNWAS S+GDKR D+ PD +IFVGDLAADVTD +L ETF   YPSVK AKVV D  TGR+KGYGFVRF D++E+ +AMTEMNGV CS+RPMRIG A  +K  +G +   QS+     ++ D  NTT+FVGGLD +VT + L+  FSQYGEIV VKIP GK CGFVQF+ ++ AEEAL+ LNG  +G   VRLSWGR+P+NKQ
Sbjct:   60 EIRTLWIGDLQYWMDENFLYGCFAHTGEMVSAKVIRNKQTGQVEGYGFIEFASHAAAERVLQTFNNAPIPSFPDQLFRLNWASLSSGDKRDDS-PDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQIRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLSWGRSPSNKQ 338          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: RB45A_ARATH (Polyadenylate-binding protein RBP45A OS=Arabidopsis thaliana OX=3702 GN=RBP45A PE=2 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 3.648e-111
Identity = 170/284 (59.86%), Postives = 205/284 (72.18%), Query Frame = 1
Query:  256 GSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKR-SDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIG-AATPRKXXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNPANKQ 1101
            GS+++ K++W+GDL  WMDENY+   FA +GE +S KVIRNK TG SEGYGF+EF SH  AE+VLQTY    MP+TEQ FRLNWA    G+KR     PD +IFVGDLA +VTD ML +TF N Y SVK AKVV D  TGRSKGYGFVRF D+NE+ +AMTEMNG YCS+RPMRIG AA            Q+   +N  + D  NTTIFVGGLD NVT ++L+  F Q+GE++ VKIP GK CGFVQ+AN+ +AE AL  LNGT +G Q +RLSWGR+P NKQ
Sbjct:   54 GSASDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTYNGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSP-NKQ 336          
BLAST of Vigun09g240200.1 vs. DB:Swiss
Match: R47BP_ARATH (Polyadenylate-binding protein RBP47B' OS=Arabidopsis thaliana OX=3702 GN=RBP47B' PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 1.108e-107
Identity = 162/297 (54.55%), Postives = 201/297 (67.68%), Query Frame = 1
Query:  247 HHQGSSAENKTVWVGDLHHWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQTYGAILMPNTEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRK----------------XXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRNP 1089
            HH  +  E +T+W+GDL +W+DENYL  CF+ TGE+ S+KVIRNK TG  EGYGF+EF SH  AE+ LQTY    MP TE  FRLNWASF +G K  D  PD SIFVGDLA DVTD +L ETF   Y SV+ AKVV D +TGRSKGYGFV+F +++ER++AM EMNG+YCS+RPMRI AATP+K                T      +         E+D T TTI V  LD NVT E+L++ FSQ GE++ VKIP  KG G+VQF  R +AEEA+Q++ G  IG+Q VR+SW +NP
Sbjct:   15 HHPQTLEEVRTLWIGDLQYWVDENYLTSCFSQTGELVSVKVIRNKITGQPEGYGFIEFISHAAAERTLQTYNGTQMPGTELTFRLNWASFGSGQK-VDAGPDHSIFVGDLAPDVTDYLLQETFRVHYSSVRGAKVVTDPSTGRSKGYGFVKFAEESERNRAMAEMNGLYCSTRPMRISAATPKKNVGVQQQYVTKAVYPVTVPSAVAAPVQAYVAPPESDVTCTTISVANLDQNVTEEELKKAFSQLGEVIYVKIPATKGYGYVQFKTRPSAEEAVQRMQGQVIGQQAVRISWSKNP 310          
The following BLAST results are available for this feature:
BLAST of Vigun09g240200.1 vs. DB:Swiss
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
RB47C_ARATH9.937e-14570.29Polyadenylate-binding protein RBP47C OS=Arabidopsi... [more]
RBP47_NICPL2.241e-14465.57Polyadenylate-binding protein RBP47 OS=Nicotiana p... [more]
R47CP_ARATH3.396e-14369.97Polyadenylate-binding protein RBP47C' OS=Arabidops... [more]
RB47B_ARATH2.192e-14065.47Polyadenylate-binding protein RBP47B OS=Arabidopsi... [more]
RB47A_ARATH5.032e-13667.12Polyadenylate-binding protein RBP47A OS=Arabidopsi... [more]
RBP45_NICPL7.377e-11560.78Polyadenylate-binding protein RBP45 OS=Nicotiana p... [more]
RP45C_ARATH1.427e-11459.93Polyadenylate-binding protein RBP45C OS=Arabidopsi... [more]
RB45B_ARATH1.777e-11361.79Polyadenylate-binding protein RBP45B OS=Arabidopsi... [more]
RB45A_ARATH3.648e-11159.86Polyadenylate-binding protein RBP45A OS=Arabidopsi... [more]
R47BP_ARATH1.108e-10754.55Polyadenylate-binding protein RBP47B' OS=Arabidops... [more]
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InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 186..260
e-value: 7.9E-18
score: 75.2
coord: 93..168
e-value: 2.2E-12
score: 57.1
coord: 291..358
e-value: 3.5E-22
score: 89.7
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 187..256
e-value: 2.9E-15
score: 55.9
coord: 94..154
e-value: 1.1E-11
score: 44.4
coord: 292..353
e-value: 3.5E-19
score: 68.4
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 185..264
score: 16.773
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 290..362
score: 18.581
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 92..172
score: 13.652
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 91..171
e-value: 1.1E-21
score: 78.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 266..374
e-value: 5.1E-27
score: 96.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 184..260
e-value: 2.1E-21
score: 77.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 261..293
NoneNo IPR availableCDDcd12345RRM2_SECp43_likecoord: 184..263
e-value: 1.58503E-49
score: 160.522
NoneNo IPR availableCDDcd12344RRM1_SECp43_likecoord: 93..173
e-value: 4.62232E-44
score: 146.254
NoneNo IPR availableCDDcd12346RRM3_NGR1_NAM8_likecoord: 289..360
e-value: 3.416E-39
score: 133.198
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 64..153
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 279..390
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 167..279

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun09g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g240200.1; organism=Vigna unguiculata; type=mRNA; length=1966bp
GTGAGGAGTGAGGGAAAGAAAGGAAGAGGTGGCGGCGGATCCTGGAGAGA
GAGGGAAGCGAAGTTAGCGAAGCATAGTAGGAGTGTTATGCATATCCCTG
ATTAATAGATCCAATGGTTGAGATGGCGTCCCACCATTTGATCCAAGGGT
CGAAAGGGGAACCGCGTTCACGAAGCCAACCCAAGAATCCGTCATCCTCa
tcataaatcataaatcataaatcataaatcatCATCTTCTCTTAGACCCT
CACCACCGCGACCTTTCTCGAAATCCAGATTCAACCCTTCTCTCTCACTC
TTCACACATACTCGCGTAACCAACTCGCCTCGTTCCTATTTTTATTTATT
TATTTAGGGTGAAAGAAGGAAGAAGGAACAGCCGAGAGAGGCGCTTGCCG
TAACGGTAATTGAGAGAAAAGATGCAACCAACATCCAACGGCTCTGATTC
GCAAGCCACGGAGCAGAACCACCAGAcgccaccgccgccgccgccgcagc
ctgtgcccgtcccgccgcAGTGGCTCCCGATGCAGTACCCAGCGGCTGCC
ATGGTAATGCAGCACCACATGATGCCGCCTCAGCATTATgccgcgccgcc
gccgcctccgcagccCTACGTCGCCTATCACCAGTACCAGCAGCAGCTCC
CGCACGTGTCGCACGCGCACCATCAGGGATCCAGCGCCGAGAACAAGACC
GTATGGGTCGGGGATTTGCATCACTGGATGGATGAAAATTATCTCCACCG
CTGTTTCGCTACTACCGGCGAGATTTCCTCCATTAAGGTTATTCGAAATA
AGCAGACTGGTCTATCAGAGGGTTATGGATTTGTGGAATTCTATTCGCAT
GGCACAGCTGAGAAAGTTTTGCAGACTTATGGTGCGATATTGATGCCCAA
CACAGAGCAACCTTTCCGCCTGAACTGGGCATCATTTAGCACAGGAGACA
AGCGTTCAGATAATGTCCCTGATCTTTCTATTTTTGTAGGAGATTTAGCT
GCTGATGTTACAGATAGCATGTTGCATGAAACTTTTTCTAATAGATACCC
ATCTGTTAAAGCTGCAAAAGTTGTTTTTGATGCCAATACTGGCCGTTCAA
AGGGTTATGGTTTCGTCAGGTTTGGAGATGATAATGAGAGGTCTCAAGCT
ATGACTGAAATGAATGGAGTTTACTGCTCTAGCAGGCCTATGCGTATTGG
TGCTGCAACTCCTAGGAAAACGTCTGGCTATCAACAAGGAAGTCAGTCAA
ATGGCACCTCAAACCAATCTGAAGCTGATTCGACGAACACAACTATATTT
GTTGGAGGTCTTGACCCTAATGTCACTGCTGAAGATCTTAGGCAGCCATT
CTCCCAGTATGGTGAGATAGTCTCTGTTAAGATCCCTGTTGGAAAAGGAT
GTGGTTTTGTACAATTTGCAAACAGAAATAATGCTGAAGAGGCATTGCAG
AAGCTAAATGGGACAACTATTGGCAAGCAAATGGTTCGTCTTTCGTGGGG
CCGCAATCCAGCAAATAAGCAGTTTAGAGGAGAATTGGGGAGTCCTTGGA
GTGGGGCGTATTACGGAGGAACTGTTTATGATGGTTATGGGTATGCTTTA
CCAGCTCCTCATGACCCGAGTATCTATGCTGCTGCTTATGGGGCATACCC
TATTTATGGAGGACATCAGCAGCAAGTAAGTTAAGTGCGTGCATGGCAGG
AGTAGGACTTACCAACAGCATCTCGCCCTTGAACAACCACATTAACATTC
TCCCTTGTAACTTTCTGAAGAATCCCTCCTAATTCTGGAGTGGACTTGAA
TTTTGATAACCAGAGCTAGGAATTCAATTAAATCATTTGTTTACACTCCT
AGGAGTAATGGGGATATTTAAACTTGTTTGTTCGAATAATTAACTATGCT
TAAGTTTGTCCTCTTCCTTGCACTTGAATTCTTTATGCAATTTTATAGTT
TGATTGATTTTTTTTT
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protein sequence of Vigun09g240200.1_Vu_IT97K-499-35_v1.1

>Vigun09g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g240200.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=421bp
MQPTSNGSDSQATEQNHQTPPPPPPQPVPVPPQWLPMQYPAAAMVMQHHM
MPPQHYAAPPPPPQPYVAYHQYQQQLPHVSHAHHQGSSAENKTVWVGDLH
HWMDENYLHRCFATTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVL
QTYGAILMPNTEQPFRLNWASFSTGDKRSDNVPDLSIFVGDLAADVTDSM
LHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGV
YCSSRPMRIGAATPRKTSGYQQGSQSNGTSNQSEADSTNTTIFVGGLDPN
VTAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTI
GKQMVRLSWGRNPANKQFRGELGSPWSGAYYGGTVYDGYGYALPAPHDPS
IYAAAYGAYPIYGGHQQQVS*
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mRNA from alignment at Vu09:41014053..41018145+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun09g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g240200.1; organism=Vigna unguiculata; type=mRNA; length=4093bp; location=Sequence derived from: Vu09:41014053..41018145+ (Vigna unguiculata
GTGAGGAGTGAGGGAAAGAAAGGAAGAGGTGGCGGCGGATCCTGGAGAGA GAGGGAAGCGAAGTTAGCGAAGCATAGTAGGAGTGTTATGCATATCCCTG ATTAATAGATCCAATGGTTGAGATGGCGTCCCACCATTTGATCCAAGGGT CGAAAGGGGAACCGCGTTCACGAAGCCAACCCAAGAATCCGTCATCCTCA TCATAAATCATAAATCATAAATCATAAATCATCATCTTCTCTTAGACCCT CACCACCGCGACCTTTCTCGAAATCCAGATTCAACCCTTCTCTCTCACTC TTCACACATACTCGCGTAACCAACTCGCCTCGTTCCTATTTTTATTTATT TATTTAGGGTGAAAGAAGGAAGAAGGAACAGCCGAGAGAGGCGCTTGCCG TAACGGTAATTGAGAGAAAAGATGCAACCAACATCCAACGGCTCTGATTC GCAAGCCACGGAGCAGAACCACCAGACGCCACCGCCGCCGCCGCCGCAGC CTGTGCCCGTCCCGCCGCAGTGGCTCCCGATGCAGTACCCAGCGGCTGCC ATGGTAATGCAGCACCACATGATGCCGCCTCAGCATTATGCCGCGCCGCC GCCGCCTCCGCAGCCCTACGTCGCCTATCACCAGTACCAGCAGCAGCTCC CGCACGTGTCGCACGCGCACCATCAGGGATCCAGCGCCGAGAACAAGACC GTATGGGTCGGGGATTTGCATCACTGGATGGATGAAAATTATCTCCACCG CTGTTTCGCTACTACCGGCGAGGTCCTTCTTTCTCTCTCTCTCTCTCTGT ATATATGTTTTCTCGCACAACATGTTAACGCACACTCGTACTAGTGTGTT CTTTTACTGATTGTTCTGATGTTTTTTTTTTCAAACGTAAAAACTGTTCC TGTTCGGTTTCTTTGTTTAAAGAGGTTGTCCAAATCATCATTATTGTGAG ATGATGAGTCTAACGTGGGTTTTTGACAATTGGATTGAGCTTTCTTTGTT ATGATGTGGTATGTGAAGTTTTTTGCATGGTTTCGTTTTGGTTCAGTGTC AACCTCGGCAATGTAAGAAGAAAGGATAATCCCTTGTTTTTTCCTTTTTG TTTTCTTTTTGTAATCTTGTGATAAAAAAAGGTGATATACTTTTTGTTTT TTATAAACATGCTAATTGAAGTTTAGAAATTGAGTAGAGTTTCAAATTGG TTTTTGTGTTATTTGAAAAATTATTCTGTTTGCAAATCCTTCAGGCAACC TCAACCTGTTTAATTTAATTAAGGTTTTATTGGTTTTTCTTTTTGTGTTA CTTGAAATTGTGTCTGAAACCTTATACATAAGGAGTATAACGAGGAAATA TTGTGTCACAGTGACTAGTGAACAGTTATGATAGTTTTTTTTCATCTGCA TTATGTTGCTATGAAGCACAGGTAAAACCCCTTTTCCGTTTTGCTTTCTG TGTCTTACTTGTTCAATTAGCTTCTCTCTAATTTGATTTTCTGGCATTTC AAGCTATGATACATTTAGGTGGTGCCATTTGTTTCAATTTAATTAAATTT GAATCGGTTGGAAGTTGGAGGGTTAAGTGCCTGTGTGCAAAAATCTGTAA TCTGTATGAAAAATTAGGATTTAAGCGAATTTGAAGGTTTTTGTCTCTGT TATCTGGGTTGGGCTTAAGCATTAATGGTTTTAGATTAGACACAGGTGGA GTTGATGCAGGTAAAGTAGTTTTATTTGAACTAAAAAAAAGTGATTTCAG TGTCATTCATCTGCTAGTGGCATTTGAAGTATAAATGATGAAAACTGGTT CCTGAGCTTTTGGTATAATTTAGTATTGTACATTTCTGCAGATTTCCTCC ATTAAGGTTATTCGAAATAAGCAGACTGGTCTATCAGAGGGTTATGGATT TGTGGAATTCTATTCGCATGGCACAGCTGAGAAAGTTTTGCAGACTTATG GTGCGATATTGATGCCCAACACAGAGCAACCTTTCCGCCTGAACTGGGCA TCATTTAGCACAGGAGACAAGCGTTCAGATAATGTCCCTGATCTTTCTAT TTTTGTAGGAGATTTAGCTGCTGATGTTACAGATAGCATGTTGCATGAAA CTTTTTCTAATAGATACCCATCTGTTAAAGCTGCAAAAGTTGTTTTTGAT GCCAATACTGGCCGTTCAAAGGGTTATGGTTTCGTCAGGTTTGGAGATGA TAATGAGAGGTCTCAAGCTATGACTGAAATGAATGGAGTTTACTGCTCTA GCAGGCCTATGCGTATTGGTGCTGCAACTCCTAGGAAAACGTCTGGCTAT CAACAAGGTACGCCAAATCCCACCCATTACGTCTAGTATCTCAAATTAAA TTATCTTCTTTAAATGGAATACCAGCAAAAGATATTATTATACATTCAAT TTAGAGAAAAATATTTTTAGAGGTTTGTTTCCTGTTGTACGTGTCTTGGA TCATGTTACTGCTGATAAACATTGAAGCTCATGTGAGCTATATGCATGGA TTCATTGTTGGAGTGGTTATTTCAGCATGATGTTATCTGTTCATAAGTAT GCAAGTAGCTGATTGATAAAAAATATTGAATCTTTGTTTTCCTAATAAGC TTTTTGTTTTAAAAGTTGTTTTCTAAAACAATTCTATACTCGGATATCTT GCAATCAATTTCATACCTAGAATCTATAAAATTTTGAAAATTGTTTTCTA GTGTTTTAGAAAGCAAAAAAAAACATAAACAATTGGAACTTTTTTCTCAC TCTCTCTTCTGTCATCTTTCTTTACCGTTACATACATTCAAGTGACAAAG AGTAAACCTTTAGAGAACAGGAATGTGTACAGGAACAAACACTGGTAGAT GTAGTCAGAAACAAACAAAATTTAGAAAACATGTATGTTTCAGAAAACAG TAAACAAACAAAGCCTATGTCACTCAAATTTAACTTTTATATTTTGTCCC GTGCTTGGTGCTGCAAAAGTCTGAAATAACTGTACTGGTTGAGCTTTGAT TTTGTCCCTTTATTTGTATAGGAAGTCAGTCAAATGGCACCTCAAACCAA TCTGAAGCTGATTCGACGAACACAACTGTAAGCTTTTCAGCTTTTCATTA TTAGGTTTTTTTCACCCAAAAAATAAAATTGATTTGTCACTGTATTTTCT GTTGGTGGATTCGATTATAGATATTTGTTGGAGGTCTTGACCCTAATGTC ACTGCTGAAGATCTTAGGCAGCCATTCTCCCAGTATGGTGAGATAGTCTC TGTTAAGATCCCTGTTGGAAAAGGATGTGGTTTTGTACAATTTGCAAACA GGTAGGAGTGCTGATCCTGTCATTTAAATCTTAACATAAGTATTCACAGA TATCATGGTTTTTAATTAAAATGTGTGTCCACTGCATCAACCTTTCCAGA AATAATGCTGAAGAGGCATTGCAGAAGCTAAATGGGACAACTATTGGCAA GCAAATGGTTCGTCTTTCGTGGGGCCGCAATCCAGCAAATAAGCAGGTAA CCTCTGTTATATGTATTCTTAATTATGATTATTTAATGTTAGAAGTTTGT CATATGTTGTCATTTGAATGGAGATATGAATAGTATAATTATAAACTTTC TGGTTTTGATAGATTTGGTAGTGTCTAACATAAATTGTATGGGTAGCAGT TTAGAGGAGAATTGGGGAGTCCTTGGAGTGGGGCGTATTACGGAGGAACT GTTTATGATGGTTATGGGTATGCTTTACCAGCTCCTCATGACCCGAGTAT CTATGCTGCTGCTTATGGGGCATACCCTATTTATGGAGGACATCAGCAGC AAGTAAGTTAAGTGCGTGCATGGCAGGAGTAGGACTTACCAACAGCATCT CGCCCTTGAACAACCACATTAACATTCTCCCTTGTAACTTTCTGAAGAAT CCCTCCTAATTCTGGAGTGGACTTGAATTTTGATAACCAGAGCTAGGAAT TCAATTAAATCATTTGTTTACACTCCTAGGAGTAATGGGGATATTTAAAC TTGTTTGTTCGAATAATTAACTATGCTTAAGTTTGTCCTCTTCCTTGCAC TTGAATTCTTTATGCAATTTTATAGTTTGATTGATTTTTTTTT
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Coding sequence (CDS) from alignment at Vu09:41014053..41018145+

>Vigun09g240200.1_Vu_IT97K-499-35_v1.1 ID=Vigun09g240200.1_Vu_IT97K-499-35_v1.1; Name=Vigun09g240200.1; organism=Vigna unguiculata; type=CDS; length=1263bp; location=Sequence derived from: Vu09:41014053..41018145+ (Vigna unguiculata
ATGCAACCAACATCCAACGGCTCTGATTCGCAAGCCACGGAGCAGAACCA
CCAGACGCCACCGCCGCCGCCGCCGCAGCCTGTGCCCGTCCCGCCGCAGT
GGCTCCCGATGCAGTACCCAGCGGCTGCCATGGTAATGCAGCACCACATG
ATGCCGCCTCAGCATTATGCCGCGCCGCCGCCGCCTCCGCAGCCCTACGT
CGCCTATCACCAGTACCAGCAGCAGCTCCCGCACGTGTCGCACGCGCACC
ATCAGGGATCCAGCGCCGAGAACAAGACCGTATGGGTCGGGGATTTGCAT
CACTGGATGGATGAAAATTATCTCCACCGCTGTTTCGCTACTACCGGCGA
GATTTCCTCCATTAAGGTTATTCGAAATAAGCAGACTGGTCTATCAGAGG
GTTATGGATTTGTGGAATTCTATTCGCATGGCACAGCTGAGAAAGTTTTG
CAGACTTATGGTGCGATATTGATGCCCAACACAGAGCAACCTTTCCGCCT
GAACTGGGCATCATTTAGCACAGGAGACAAGCGTTCAGATAATGTCCCTG
ATCTTTCTATTTTTGTAGGAGATTTAGCTGCTGATGTTACAGATAGCATG
TTGCATGAAACTTTTTCTAATAGATACCCATCTGTTAAAGCTGCAAAAGT
TGTTTTTGATGCCAATACTGGCCGTTCAAAGGGTTATGGTTTCGTCAGGT
TTGGAGATGATAATGAGAGGTCTCAAGCTATGACTGAAATGAATGGAGTT
TACTGCTCTAGCAGGCCTATGCGTATTGGTGCTGCAACTCCTAGGAAAAC
GTCTGGCTATCAACAAGGAAGTCAGTCAAATGGCACCTCAAACCAATCTG
AAGCTGATTCGACGAACACAACTATATTTGTTGGAGGTCTTGACCCTAAT
GTCACTGCTGAAGATCTTAGGCAGCCATTCTCCCAGTATGGTGAGATAGT
CTCTGTTAAGATCCCTGTTGGAAAAGGATGTGGTTTTGTACAATTTGCAA
ACAGAAATAATGCTGAAGAGGCATTGCAGAAGCTAAATGGGACAACTATT
GGCAAGCAAATGGTTCGTCTTTCGTGGGGCCGCAATCCAGCAAATAAGCA
GTTTAGAGGAGAATTGGGGAGTCCTTGGAGTGGGGCGTATTACGGAGGAA
CTGTTTATGATGGTTATGGGTATGCTTTACCAGCTCCTCATGACCCGAGT
ATCTATGCTGCTGCTTATGGGGCATACCCTATTTATGGAGGACATCAGCA
GCAAGTAAGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding