Vigun11g125700.1

Transcript Overview
NameVigun11g125700.1
Unique NameVigun11g125700.1_Vu_IT97K-499-35_v1.1
TypemRNA
OrganismVigna unguiculata (cowpea)
Sequence length2598
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vu11supercontigVu11:33304088..33306685 -Vigna unguiculata L. Walp IT97K-499-35 genome v1.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-15
InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.12019-10-17
BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot2019-10-17
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
vuvuL003Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
vuvuR094Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
crvuL016Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
psvuL408Pisum sativum Cameor genome v1aPisum sativum
crvuL243Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
pvvuL016Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
psvuL679Pisum sativum Cameor genome v1aPisum sativum
psvuL686Pisum sativum Cameor genome v1aPisum sativum
pvvuL156Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pvvuL481Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
cavuL012Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0015Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL177Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
caivuL0268Cicer arietinum ICC 4958 genome v2Cicer arietinum
cavuL485Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccvuL0993Cajanus cajan Asha genome v1.0Cajanus cajan
ccvuL1107Cajanus cajan Asha genome v1.0Cajanus cajan
anvuL0263Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0553Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL0931Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1041Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anvuL1084Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
asvuL094Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL430Vigna angularis Jingnong 6 genome v1.1Vigna angularis
asvuL582Vigna angularis Jingnong 6 genome v1.1Vigna angularis
vuzwsR111Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR133Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
vuzwsR144Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
tifvuL126Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL119Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
tifvuL604Vicia faba cv. Tiffany genome v1.0Vicia faba
tifvuL685Vicia faba cv. Tiffany genome v1.0Vicia faba
vfhvuL562Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vfhvuL642Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
vssvuL024Vicia sativa cv. Studenica genome v1.0Vicia sativa
vrvvuL198Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vrvvuL242Vigna radiata cv. VC1973A genome v6.0Vigna radiata
vssvuL182Vicia sativa cv. Studenica genome v1.0Vicia sativa
vssvuL450Vicia sativa cv. Studenica genome v1.0Vicia sativa
vuvuaR070Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR075Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
vuvuaR081Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
canvuL010Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL159Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canvuL451Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjvuL046Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL359Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjvuL505Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carvuL016Cicer arietinum
carvuL178Cicer arietinum
carvuL448Cicer arietinum
ccavuL090Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL197Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL272Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccavuL371Cajanus cajan cv. Asha genome v2.0Cajanus cajan
vuvumR130Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR136Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvumR156Vigna umbellata FF25 genome v1.0Vigna umbellata
vuvvaR134Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR158Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vuvvaR170Vicia villosa cv. AU Merit genome v1.0Vicia villosa
vstvuL325Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL454Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vstvuL502Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
vasvuL344Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL473Vigna angularis cv. Shumari genome v1.a1Vigna angularis
vasvuL518Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvfvuL011Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL141Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvfvuL412Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
vuvunR076Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR078Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
vuvunR086Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Phvul.005G122700.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Vigst.04G225700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Hedin2.R1.5g151240.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Psat05G0722600-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vum_06G01075.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Ca_00817Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vfaba.Tiffany.R1.5g120560.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Cr_05414.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
PvulFLAVERTChr11.560Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Cc_v2.0_07932.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Va03G075540.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_07870.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va08G058780.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_022778578.1Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Vum_04G02541.1Vigna umbellata FF25 genome v1.0Vigna umbellata
jg31718.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
evm.model.Chr01.1680Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Phvul.001G191900.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
LR48_mrnaVigan08g136200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-KK1_022353Cajanus cajan Asha genome v1.0Cajanus cajan
rna-KK1_034628Cajanus cajan Asha genome v1.0Cajanus cajan
Cr_01351.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Phvul.011G095300.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Ca_00690.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Cc_v2.0_09570.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
rna-XM_004487430.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
rna-XM_014639961.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
XM_058917703.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat03G0129000-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigan.04G348300.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
rna-XM_004494153.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
evm.model.Chr11.1212Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Cc_v2.0_23769.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vigan.06G163900.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
LR48_mrnaVigan03g245200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_23663Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigst.06G147700.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
Vigun01g175900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun01g175900.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Vigun11g125700.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Vigun11g125700Vigun11g125700_Vu_IT97K-499-35_v1.1Vigna unguiculatagene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g125700.1Vigun11g125700.1_Vu_IT97K-499-35_v1.1-proteinVigna unguiculatapolypeptide
Vigun11g125700.1_Vu_IT97K-499-35_v1.1Vigun11g125700.1_Vu_IT97K-499-35_v1.1Vigna unguiculatapolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g125700.1.v1.1.five_prime_UTR.1Vigun11g125700.1.v1.1.five_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatafive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g125700.1.v1.1.CDS.1Vigun11g125700.1.v1.1.CDS.1_Vu_IT97K-499-35_v1.1Vigna unguiculataCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Vigun11g125700.1.v1.1.three_prime_UTR.1Vigun11g125700.1.v1.1.three_prime_UTR.1_Vu_IT97K-499-35_v1.1Vigna unguiculatathree_prime_UTR


Homology
The following BLAST results are available for this feature:
BLAST of Vigun11g125700.1 vs.
Analysis Date: 2019-10-17 (BLAST: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1 vs. Swissprot)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan: Vigna unguiculata L. Walp IT97K-499-35 genome v1.1
Date Performed: 2019-10-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007608Senescence regulator S40PFAMPF04520Senescence_regcoord: 39..234
e-value: 2.3E-43
score: 148.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..135
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 120..151

Sequences
The following sequences are available for this feature:

mRNA sequence

>Vigun11g125700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125700.1; organism=Vigna unguiculata; type=mRNA; length=2598bp
ATTTTTTGTTAAAAGGAAAGAAAAAGCTTAGCCATTAGCCCCTTCAGTCT
CGTCACCGTTCACCACTCAGTGCTCTGTTATTCCTATTTTCTTTCCGTTT
CTCTCGGTGTTCCAAACCGAACAGACATGGATCCATTCGGCCCGAACCGT
CTCCCGAACCGAAAGCCCTCCGCCACAGAGCGCTACCTTGGCGTTCCATC
TCACGCGCCGCCGCCCTCCCCGTTCGTCGCCACCAACGTTGAGCTCCAAG
AGGATGACGTAGTTTTCTTCAACGGCGACTACCACACGGATTTAAACCAC
TACCAGGCCTCCACTCCTTCCTCTTCCACGTCCTCCTCTGTCTccgccac
acccaaccaccaccacctccatcaccaccacaaccacagccaccacTCTC
ATGGCATACTCGCCGCACTTCCCGAGAACGAAACCTCCCGCAGCCTCCGA
AACGTTTCGCAGCACTTCCACAAGGCCTCAATCTCCTCCATATCCTCCGC
TTCCTCTTCTTCCTCTTCCTCGCGCGTCATTCCCGCCATCCCGCGGCCTC
CACCTCCGGCGCAACCATCCTCCTTCAAGTTTCACCAGTCCGCGCCGGTG
AACGTCCCGATCTTGCCGGTGAAGGCACGGCGGAGGCAGTGTGAGTTtga
tgatgacgaggaggaggatgaagatgaggagatggtgCCGCCGCACGAAA
TCGTGGCAAGGAACTCAGCGCAATCCCCGATTCTTGCTTATTCGGTTATG
GAAGGGATAGGGAGAACGCTGAAAGGGAGGGACCTGCGTCAGGTTCGAAA
TGCTGTTTGGCGCCAAACAGGTTTCCTCGGTTGATTCATTCAATTCAAAT
TGTTCGATTAGTGTTTAATTTTAACTTATTGATTGAATTCTATTCTACTG
AATCTGGATTTGTCCTGAACTAGTGAATCTCTTTATCTATCGCAACTCCT
AGGTTCCTCACTTCCTCTTTTCGTTTCGCTTTGTTTGCCTGAGAAAATGT
GAATCATGCGCTTACCTACAGAATGAAAAAATAATTAATTAACGATGGTG
AAGTATATAGAGAAAATGAATTTTAGTTTGTCTAAGAACGAGAGTGTGTA
ACCCCGGACCATCTATTCTCTCATGGAACTGTTGAAGCTCTGGTGTCATG
CTGTGATCTGACTATTTCAAAAGTTGTAAGTAATTATGTTAAGATTAGGG
AATAATTTTATATTCACATCTACTTTCTAGAATGAGTTATATTGACATCT
ACTTTCTAGAATGAGTTATGTAAAATTGGGCATTTAGATGTTGTGGAATG
CTGATGATTTAAGGAGGTTATGCAAATGTAGTAATGGACTATGTAATCTC
TGACATACTATGACTTCTTGGATGATTTAATGCATCTATCTTCCTAGGGT
TGAGTGTGGTTTATTTCTCTGCTTTAAACATGTGACCATGGAATTGGAAG
CTCCAACTGGACCCTAAATCTAATGAATATTGTTGGTACATTCAAGCTGT
CATGCTCAGATTTGGTCTAGCTCCCCTTTTCAGGGTTAATGGTAAATGGA
TAACTTCTCCTTTAACCTGTAGTTCCATTGAATTTCAATGTTTGGTCATC
TAGTAAAAAACAGATTGGTCAGGGCATTGATTACCCAACGTTGCTTTGCC
CCCACAGTGAACAGTGAGATATATGTATCTGGCAAATTCGGATATGGTGG
TTCTGTTTGGTCTTGTTTATTGGGGACCTGATTTATTTCAGTGTTGATGA
CACTGATTTGTATTATCGGCAATAATTTACAGACTAAAAACAGGTAGGGG
TGGAAATATTGTTACTCTGGTTACGTAGGTTAGCAACTATGAAGAAAACT
TAATCTGTGCTTATGAATGAAAGAATGGAATGGAAATAGGGATGACAATC
AAACCCAAATTTGATGAGTATTAATATAAGTTTCTTGCAATGGATCTGAT
CCTGTATAGATATTTACCAAGACTTTTTTCGTGTATGGATACAACATTAT
AGGTGTTATAGTACTTAAACTTGCGAAAACCTGCATAATGTATTTATGAT
TAGAAGATGAAAGATTTTTATGTATTTTGGAATATTTTATAAGTAGAAAT
GAATTATCATTGAATATATTTGAATGAAGAGAATGTACTTCAATttatat
tttcttttattggcttattattattattaatgtattattatAGTAACATT
TGTTCTTTGCTAGTTGGTTGAACAAATGCATTATGTTATTTTGAAATACC
ATATTCAAGTTTAACTGTGATATGTAGATGGTTTCGGGTCTGAGTATATG
AATACTTAAGGTTACAGATACAATAGCAATGTCGATATGGGAACATTCTC
TTAAGTACCAATCTATTCTCGTCCTTAAATAGACGAGAAAAGATGAGGGA
TGGTTTAGAGCTTTTGGACATACATTTTAACTtctatatctgtgtttctc
tctctccctctctctctattcctatctcactTAAACGTAAAAGGATAACC
TAAAGTCAGACAAATGTGATAATAAGAGTCTTGTTTTTGTGGCCATTATA
TGAAATTCTGTTTGAAGATGTTCTTAATACCTTCTATCTTCTTTAGTA
back to top

protein sequence of Vigun11g125700.1_Vu_IT97K-499-35_v1.1

>Vigun11g125700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125700.1_Vu_IT97K-499-35_v1.1; organism=Vigna unguiculata; type=polypeptide; length=236bp
MDPFGPNRLPNRKPSATERYLGVPSHAPPPSPFVATNVELQEDDVVFFNG
DYHTDLNHYQASTPSSSTSSSVSATPNHHHLHHHHNHSHHSHGILAALPE
NETSRSLRNVSQHFHKASISSISSASSSSSSSRVIPAIPRPPPPAQPSSF
KFHQSAPVNVPILPVKARRRQCEFDDDEEEDEDEEMVPPHEIVARNSAQS
PILAYSVMEGIGRTLKGRDLRQVRNAVWRQTGFLG*
back to top

mRNA from alignment at Vu11:33304088..33306685-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Vigun11g125700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125700.1; organism=Vigna unguiculata; type=mRNA; length=2598bp; location=Sequence derived from: Vu11:33304088..33306685- (Vigna unguiculata
ATTTTTTGTTAAAAGGAAAGAAAAAGCTTAGCCATTAGCCCCTTCAGTCT CGTCACCGTTCACCACTCAGTGCTCTGTTATTCCTATTTTCTTTCCGTTT CTCTCGGTGTTCCAAACCGAACAGACATGGATCCATTCGGCCCGAACCGT CTCCCGAACCGAAAGCCCTCCGCCACAGAGCGCTACCTTGGCGTTCCATC TCACGCGCCGCCGCCCTCCCCGTTCGTCGCCACCAACGTTGAGCTCCAAG AGGATGACGTAGTTTTCTTCAACGGCGACTACCACACGGATTTAAACCAC TACCAGGCCTCCACTCCTTCCTCTTCCACGTCCTCCTCTGTCTCCGCCAC ACCCAACCACCACCACCTCCATCACCACCACAACCACAGCCACCACTCTC ATGGCATACTCGCCGCACTTCCCGAGAACGAAACCTCCCGCAGCCTCCGA AACGTTTCGCAGCACTTCCACAAGGCCTCAATCTCCTCCATATCCTCCGC TTCCTCTTCTTCCTCTTCCTCGCGCGTCATTCCCGCCATCCCGCGGCCTC CACCTCCGGCGCAACCATCCTCCTTCAAGTTTCACCAGTCCGCGCCGGTG AACGTCCCGATCTTGCCGGTGAAGGCACGGCGGAGGCAGTGTGAGTTTGA TGATGACGAGGAGGAGGATGAAGATGAGGAGATGGTGCCGCCGCACGAAA TCGTGGCAAGGAACTCAGCGCAATCCCCGATTCTTGCTTATTCGGTTATG GAAGGGATAGGGAGAACGCTGAAAGGGAGGGACCTGCGTCAGGTTCGAAA TGCTGTTTGGCGCCAAACAGGTTTCCTCGGTTGATTCATTCAATTCAAAT TGTTCGATTAGTGTTTAATTTTAACTTATTGATTGAATTCTATTCTACTG AATCTGGATTTGTCCTGAACTAGTGAATCTCTTTATCTATCGCAACTCCT AGGTTCCTCACTTCCTCTTTTCGTTTCGCTTTGTTTGCCTGAGAAAATGT GAATCATGCGCTTACCTACAGAATGAAAAAATAATTAATTAACGATGGTG AAGTATATAGAGAAAATGAATTTTAGTTTGTCTAAGAACGAGAGTGTGTA ACCCCGGACCATCTATTCTCTCATGGAACTGTTGAAGCTCTGGTGTCATG CTGTGATCTGACTATTTCAAAAGTTGTAAGTAATTATGTTAAGATTAGGG AATAATTTTATATTCACATCTACTTTCTAGAATGAGTTATATTGACATCT ACTTTCTAGAATGAGTTATGTAAAATTGGGCATTTAGATGTTGTGGAATG CTGATGATTTAAGGAGGTTATGCAAATGTAGTAATGGACTATGTAATCTC TGACATACTATGACTTCTTGGATGATTTAATGCATCTATCTTCCTAGGGT TGAGTGTGGTTTATTTCTCTGCTTTAAACATGTGACCATGGAATTGGAAG CTCCAACTGGACCCTAAATCTAATGAATATTGTTGGTACATTCAAGCTGT CATGCTCAGATTTGGTCTAGCTCCCCTTTTCAGGGTTAATGGTAAATGGA TAACTTCTCCTTTAACCTGTAGTTCCATTGAATTTCAATGTTTGGTCATC TAGTAAAAAACAGATTGGTCAGGGCATTGATTACCCAACGTTGCTTTGCC CCCACAGTGAACAGTGAGATATATGTATCTGGCAAATTCGGATATGGTGG TTCTGTTTGGTCTTGTTTATTGGGGACCTGATTTATTTCAGTGTTGATGA CACTGATTTGTATTATCGGCAATAATTTACAGACTAAAAACAGGTAGGGG TGGAAATATTGTTACTCTGGTTACGTAGGTTAGCAACTATGAAGAAAACT TAATCTGTGCTTATGAATGAAAGAATGGAATGGAAATAGGGATGACAATC AAACCCAAATTTGATGAGTATTAATATAAGTTTCTTGCAATGGATCTGAT CCTGTATAGATATTTACCAAGACTTTTTTCGTGTATGGATACAACATTAT AGGTGTTATAGTACTTAAACTTGCGAAAACCTGCATAATGTATTTATGAT TAGAAGATGAAAGATTTTTATGTATTTTGGAATATTTTATAAGTAGAAAT GAATTATCATTGAATATATTTGAATGAAGAGAATGTACTTCAATTTATAT TTTCTTTTATTGGCTTATTATTATTATTAATGTATTATTATAGTAACATT TGTTCTTTGCTAGTTGGTTGAACAAATGCATTATGTTATTTTGAAATACC ATATTCAAGTTTAACTGTGATATGTAGATGGTTTCGGGTCTGAGTATATG AATACTTAAGGTTACAGATACAATAGCAATGTCGATATGGGAACATTCTC TTAAGTACCAATCTATTCTCGTCCTTAAATAGACGAGAAAAGATGAGGGA TGGTTTAGAGCTTTTGGACATACATTTTAACTTCTATATCTGTGTTTCTC TCTCTCCCTCTCTCTCTATTCCTATCTCACTTAAACGTAAAAGGATAACC TAAAGTCAGACAAATGTGATAATAAGAGTCTTGTTTTTGTGGCCATTATA TGAAATTCTGTTTGAAGATGTTCTTAATACCTTCTATCTTCTTTAGTA
back to top

Coding sequence (CDS) from alignment at Vu11:33304088..33306685-

>Vigun11g125700.1_Vu_IT97K-499-35_v1.1 ID=Vigun11g125700.1_Vu_IT97K-499-35_v1.1; Name=Vigun11g125700.1; organism=Vigna unguiculata; type=CDS; length=708bp; location=Sequence derived from: Vu11:33304088..33306685- (Vigna unguiculata
ATGGATCCATTCGGCCCGAACCGTCTCCCGAACCGAAAGCCCTCCGCCAC
AGAGCGCTACCTTGGCGTTCCATCTCACGCGCCGCCGCCCTCCCCGTTCG
TCGCCACCAACGTTGAGCTCCAAGAGGATGACGTAGTTTTCTTCAACGGC
GACTACCACACGGATTTAAACCACTACCAGGCCTCCACTCCTTCCTCTTC
CACGTCCTCCTCTGTCTCCGCCACACCCAACCACCACCACCTCCATCACC
ACCACAACCACAGCCACCACTCTCATGGCATACTCGCCGCACTTCCCGAG
AACGAAACCTCCCGCAGCCTCCGAAACGTTTCGCAGCACTTCCACAAGGC
CTCAATCTCCTCCATATCCTCCGCTTCCTCTTCTTCCTCTTCCTCGCGCG
TCATTCCCGCCATCCCGCGGCCTCCACCTCCGGCGCAACCATCCTCCTTC
AAGTTTCACCAGTCCGCGCCGGTGAACGTCCCGATCTTGCCGGTGAAGGC
ACGGCGGAGGCAGTGTGAGTTTGATGATGACGAGGAGGAGGATGAAGATG
AGGAGATGGTGCCGCCGCACGAAATCGTGGCAAGGAACTCAGCGCAATCC
CCGATTCTTGCTTATTCGGTTATGGAAGGGATAGGGAGAACGCTGAAAGG
GAGGGACCTGCGTCAGGTTCGAAATGCTGTTTGGCGCCAAACAGGTTTCC
TCGGTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR007608Senescence_reg_S40