Phvul.002G039232.1

Transcript Overview
NamePhvul.002G039232.1
Unique NamePhvul.002G039232.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr02supercontigChr02:3756479..3757928 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL098Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL110Pisum sativum Cameor genome v1aPisum sativum
pvvuR207Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR210Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0790Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL1031Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL696Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL930Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL589Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL780Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0989Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL1030Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0328Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0534Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0580Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1104Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1287Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL151Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR196Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR270Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR222Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR310Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR218Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR303Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR197Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR219Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR182Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR185Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR277Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR347Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL570Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL751Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL084Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL718Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL574Cicer arietinum
carpvL774Cicer arietinum
ccapvL472Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL578Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR271Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR335Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR253Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR310Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR266Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR260Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvasR329Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR325Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR193Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR197Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR191Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR192Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.002G039232Phvul.002G039232_Pv_G19833_v2.1Phaseolus vulgarisgene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G039232.1.v2.1.five_prime_UTR.1Phvul.002G039232.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G039232.1.v2.1.CDS.1Phvul.002G039232.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.002G039232.1.v2.1.CDS.2Phvul.002G039232.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G039232.1.v2.1.three_prime_UTR.1Phvul.002G039232.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.002G039232.1Phvul.002G039232.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.002G039232.1_Pv_G19833_v2.1Phvul.002G039232.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


Homology
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris OX=3885 GN=CHS17 PE=2 SV=1)

HSP 1 Score: 801.971 bits (2070), Expect = 0.000e+0
Identity = 384/389 (98.71%), Postives = 386/389 (99.23%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMS ACVLFILDEMRRKS E GLKTTGEGLEWGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSGACVLFILDEMRRKSAEKGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHSY_PUEML (Chalcone synthase OS=Pueraria montana var. lobata OX=3893 GN=CHS PE=2 SV=1)

HSP 1 Score: 781.171 bits (2016), Expect = 0.000e+0
Identity = 372/389 (95.63%), Postives = 381/389 (97.94%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSV+EIRQAQRAEGPATILAIGTA P NCVDQSTYPDYYFRITNSEHMT+LKEKFQRMCDKSMIKKRYM+L EEILKENPNMCAYMAPSLDARQD+VVVEVPKLGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTK LGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQ+EKPL+ELVWTAQTIAPDS+GAIDGHLREVGLTFHLLKDVPGIVSKNI KALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKS ENGLKTTGEGLEWGVLFGFGPGLTIETVVL SVA+
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNCVDQSTYPDYYFRITNSEHMTELKEKFQRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max OX=3847 GN=CHS7 PE=3 SV=1)

HSP 1 Score: 775.393 bits (2001), Expect = 0.000e+0
Identity = 370/389 (95.12%), Postives = 381/389 (97.94%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSV+EIRQAQRAEGPATILAIGTA P N VDQSTYPDYYFRITNS+HMT+LKEKFQRMCDKSMIK RYM+LNEEILKENPNMCAYMAPSLDARQD+VVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTK LGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQ+EKPL+ELVWTAQTIAPDS+GAIDGHLREVGLTFHLLKDVPGIVSKNI KALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLS+YGNMSSACVLFILDEMRRKS ENG KTTGEGLEWGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVAEIRQAQRAEGPATILAIGTANPPNRVDQSTYPDYYFRITNSDHMTELKEKFQRMCDKSMIKTRYMYLNEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKQLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSEYGNMSSACVLFILDEMRRKSAENGHKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata OX=3917 GN=CHS PE=2 SV=1)

HSP 1 Score: 768.459 bits (1983), Expect = 0.000e+0
Identity = 369/389 (94.86%), Postives = 380/389 (97.69%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIRQAQRAEGPATILAIGTATP NCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMH+ EEILKENP+MCAYMAPSLDARQDIVVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDS+GAIDGHLREVGLTFHLLKDVPGIVSKNIGKAL EAF+PLNISDYNSIFWIAHPGGPAILDQV QKLGLKPEKMKATRDVLSDYGNMSSACV F LDE+  KSVENGLKTTG+ LEWGVLFGFGPGL++ETVVLHSVA+
Sbjct:    1 MVSVSEIRQAQRAEGPATILAIGTATPPNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHVTEEILKENPSMCAYMAPSLDARQDIVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALSEAFDPLNISDYNSIFWIAHPGGPAILDQVAQKLGLKPEKMKATRDVLSDYGNMSSACVTFHLDEI-EKSVENGLKTTGKDLEWGVLFGFGPGLSLETVVLHSVAI 388
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa OX=3879 GN=CHS9 PE=2 SV=1)

HSP 1 Score: 753.436 bits (1944), Expect = 0.000e+0
Identity = 353/389 (90.75%), Postives = 378/389 (97.17%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIRQAQRAEGPATI+AIGTA P+NCV+QSTYPD+YF+ITNSEH  +LKEKFQRMCDKSMIK+RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDPIP+IEKP+FE+VWTAQTIAPDS+GAIDGHLRE GLTFHLLKDVPGIVSKNI KAL EAF PLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATR+VLS+YGNMSSACVLFILDEMR+KS + GLKTTGEGL+WGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum OX=3888 GN=CHS5 PE=3 SV=1)

HSP 1 Score: 753.051 bits (1943), Expect = 0.000e+0
Identity = 353/389 (90.75%), Postives = 377/389 (96.92%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIR+AQRAEGPATILAIGTA P+NCV+QSTYPD+YFRITNSEH T+LK+KFQRMCDKSMI +RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDPIP+IEKP+FE+VWTAQTIAPDS+GAIDGHLRE GLTFHLLKDVP IVSKNI KAL EAF PL ISDYNSIFWIAHPGGPAILDQVEQKL LKPEKMKATR+VLS+YGNMSSACVLFILDEMRRKS++NGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPAIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRRKSIQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum OX=3888 GN=CHS6 PE=2 SV=1)

HSP 1 Score: 751.51 bits (1939), Expect = 0.000e+0
Identity = 352/389 (90.49%), Postives = 378/389 (97.17%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIR+AQRAEGPATILAIGTATP+NCV+QSTYPD+YF+ITNSEH T LKEKFQRMCDKSMIK+RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDP+P+IEKP+FE+VWTAQTIAPDS+GAIDGHLRE GLTFHLLKDVPGIVSKNI KAL EAF PLNI DYNSIFWIAHPGGPAILDQVE+KLGLKPEKMKATR+VLS+YGNMSSACVLFILDEMR+KS + GLKTTGEGL+WGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPLPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFQPLNIDDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum OX=3900 GN=CHS6 PE=2 SV=1)

HSP 1 Score: 750.355 bits (1936), Expect = 0.000e+0
Identity = 351/389 (90.23%), Postives = 377/389 (96.92%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSV+EIR+AQRAEGPATILAIGTA P+N V+Q+TYPD+YF+ITNSEH T+LKEKFQRMCDKSMIK RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDP+P+IEKP+FE+VWTAQTIAPDS+GAIDGHLRE GLTFHLLKDVPGIVSKNI KAL EAF PLNISDYNSIFWIAHPGGPAILDQVEQKL LKPEKMKATRDVLS+YGNMSSACVLFILDEMR+KS +NGLKTTGEGL+WGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATRDVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa OX=3879 GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 750.355 bits (1936), Expect = 0.000e+0
Identity = 352/389 (90.49%), Postives = 377/389 (96.92%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIRQAQRAEGPATI+AIGTA PSNCV+QSTYPD+YF+ITNSEH  +LKEKFQRMCDKSMIK+RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDPIP+IEKP+FE+VWTAQTIAPDS+GAIDGHL E GLTFHLLKDVPGIVSKNI KAL EAF PLNISDYNSIFWIAHPGGPAILDQVE+KLGLKPEKMKATR+VLS+YGNMSSACVLFILDEMR+KS + GLKTTGEGL+WGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPIPEIEKPIFEMVWTAQTIAPDSEGAIDGHLVEAGLTFHLLKDVPGIVSKNIDKALIEAFQPLNISDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQAGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389
[Close]
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum OX=3888 GN=CHS3 PE=3 SV=1)

HSP 1 Score: 749.969 bits (1935), Expect = 0.000e+0
Identity = 351/389 (90.23%), Postives = 376/389 (96.66%), Query Frame = 1 
Query:    1 MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMTDLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV 1167
            MVSVSEIR+AQRAEGPATILAIGTA P+NCV+QSTYPD+YFRITNSEH T+LK+KFQRMCDKSMI +RYM+L EEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLR+AKDLAENNKGARVLVVCSE+TAVTFRGPSDTHLDSLVGQALFGDGAAA+IVGSDP+P+IE P+FE+VWTAQTIAPDS+GAIDGHLRE GLTFHLLKDVP IVSKNI KAL EAF PL ISDYNSIFWIAHPGGPAILDQVEQKL LKPEKMKATR+VLS+YGNMSSACVLFILDEMRRKS++NGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVA+
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEVTAVTFRGPSDTHLDSLVGQALFGDGAAALIVGSDPLPEIENPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPAIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRRKSIQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389
The following BLAST results are available for this feature:
BLAST of Phvul.002G039232.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
CHSY_PHAVU0.000e+098.71Chalcone synthase 17 OS=Phaseolus vulgaris OX=3885... [more]
CHSY_PUEML0.000e+095.63Chalcone synthase OS=Pueraria montana var. lobata ... [more]
CHS7_SOYBN0.000e+095.12Chalcone synthase 7 OS=Glycine max OX=3847 GN=CHS7... [more]
CHSY_VIGUN0.000e+094.86Chalcone synthase OS=Vigna unguiculata OX=3917 GN=... [more]
CHS9_MEDSA0.000e+090.75Chalcone synthase 9 OS=Medicago sativa OX=3879 GN=... [more]
CHS5_PEA0.000e+090.75Chalcone synthase 5 OS=Pisum sativum OX=3888 GN=CH... [more]
CHS6_PEA0.000e+090.49Chalcone synthase 6 OS=Pisum sativum OX=3888 GN=CH... [more]
CHS6_TRISU0.000e+090.23Chalcone synthase 6 OS=Trifolium subterraneum OX=3... [more]
CHS3_MEDSA0.000e+090.49Chalcone synthase 4-1 OS=Medicago sativa OX=3879 G... [more]
CHS3_PEA0.000e+090.23Chalcone synthase 3 OS=Pisum sativum OX=3888 GN=CH... [more]
back to top
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 236..389
e-value: 1.2E-54
score: 185.7
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 1..235
e-value: 3.8E-94
score: 316.5
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 235..386
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 1..233
IPR012328Chalcone/stilbene synthase, C-terminalPFAMPF02797Chal_sti_synt_Ccoord: 238..387
e-value: 8.0E-68
score: 227.2
IPR001099Chalcone/stilbene synthase, N-terminalPFAMPF00195Chal_sti_synt_Ncoord: 5..228
e-value: 4.6E-125
score: 415.4
IPR011141Polyketide synthase, type IIIPIRSFPIRSF000451PKS_IIIcoord: 2..389
e-value: 4.1E-137
score: 455.0
IPR018088Chalcone/stilbene synthase, active sitePROSITEPS00441CHALCONE_SYNTHcoord: 156..172
NoneNo IPR availableCDDcd00831CHS_likecoord: 16..384
e-value: 1.9593E-174
score: 488.658

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.002G039232.1_Pv_G19833_v2.1

>Phvul.002G039232.1_Pv_G19833_v2.1 ID=Phvul.002G039232.1_Pv_G19833_v2.1; Name=Phvul.002G039232.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=390bp
MVSVSEIRQAQRAEGPATILAIGTATPSNCVDQSTYPDYYFRITNSEHMT
DLKEKFQRMCDKSMIKKRYMHLNEEILKENPNMCAYMAPSLDARQDIVVV
EVPKLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGL
RPYVKRYMMYQQGCFAGGTVLRMAKDLAENNKGARVLVVCSEITAVTFRG
PSDTHLDSLVGQALFGDGAAAVIVGSDPIPQIEKPLFELVWTAQTIAPDS
DGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFW
IAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMR
RKSVENGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAV*
back to top

mRNA from alignment at Chr02:3756479..3757928+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.002G039232.1_Pv_G19833_v2.1 ID=Phvul.002G039232.1_Pv_G19833_v2.1; Name=Phvul.002G039232.1; organism=Phaseolus vulgaris; type=mRNA; length=1450bp; location=Sequence derived from: Chr02:3756479..3757928+ (Phaseolus vulgaris
AAACACACAACTTCAGCAACCAAACCAACAACCCTCTCTACCATCGAAAA
CATCACCACTTCATTACTTCTATTCAAGAAAACTGAGATGGTGAGTGTAT
CCGAGATCCGCCAGGCTCAAAGGGCAGAAGGCCCAGCAACCATCCTTGCC
ATTGGAACTGCAACCCCATCGAACTGTGTTGATCAGAGCACATATCCTGA
TTACTACTTCAGAATCACAAACAGTGAGCACATGACCGACCTCAAAGAGA
AGTTCCAGCGCATGTGTAAGTCCTCTCATCTTCTCATATCTACAAAAATC
AGAAATCTAACAAGTTTATGATGTTGAATGAAGGTGATGATTAACATTGA
TATTGGTTTACAATGTTTCAGGTGATAAGTCGATGATAAAGAAGAGATAT
ATGCACCTCAACGAGGAGATACTGAAGGAGAATCCTAACATGTGTGCTTA
CATGGCACCTTCTTTAGATGCGAGGCAAGACATAGTTGTGGTAGAGGTAC
CAAAGCTAGGGAAAGAGGCTGCAGTGAAGGCCATAAAGGAGTGGGGACAG
CCAAAGTCAAAGATTACACACTTGATATTTTGCACCACTAGTGGCGTGGA
CATGCCTGGTGCTGATTACCAGCTCACAAAACTCTTGGGACTTCGACCCT
ATGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCAGGAGGCACG
GTTCTTCGAATGGCCAAGGATTTGGCTGAGAACAACAAGGGTGCCCGTGT
GCTTGTGGTGTGTTCTGAGATCACTGCAGTGACTTTCCGTGGGCCAAGTG
ACACCCACCTAGACAGTCTTGTGGGACAGGCATTGTTTGGAGATGGAGCA
GCTGCAGTGATTGTTGGTTCTGACCCAATTCCACAGATTGAGAAGCCTTT
GTTTGAGCTGGTTTGGACTGCACAGACCATTGCTCCAGACAGTGATGGTG
CTATTGATGGCCACCTTCGTGAAGTTGGACTCACGTTTCACCTCCTTAAG
GATGTTCCTGGGATTGTCTCAAAGAACATTGGAAAGGCACTTTTTGAGGC
CTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGGATTGCAC
ACCCTGGTGGACCTGCAATTCTGGACCAAGTTGAGCAAAAGTTGGGTCTG
AAACCTGAAAAGATGAAGGCCACTAGAGATGTGCTTAGTGATTATGGGAA
CATGTCAAGTGCATGTGTGCTTTTCATCTTGGATGAGATGAGGAGGAAAT
CAGTTGAAAATGGACTTAAAACAACAGGTGAAGGACTTGAATGGGGTGTT
TTGTTTGGTTTTGGACCTGGTCTTACCATCGAGACTGTTGTTCTCCACAG
TGTTGCAGTCTAACACCCACACCGTACCCTATTCTATTGTTTTATTATGT
ACCAATTTTAAAACTTGTTGAAGGTTGTAATTTGCATTAAAATGATACAC
back to top

Coding sequence (CDS) from alignment at Chr02:3756479..3757928+

>Phvul.002G039232.1_Pv_G19833_v2.1 ID=Phvul.002G039232.1_Pv_G19833_v2.1; Name=Phvul.002G039232.1; organism=Phaseolus vulgaris; type=CDS; length=1170bp; location=Sequence derived from: Chr02:3756479..3757928+ (Phaseolus vulgaris
ATGGTGAGTGTATCCGAGATCCGCCAGGCTCAAAGGGCAGAAGGCCCAGC
AACCATCCTTGCCATTGGAACTGCAACCCCATCGAACTGTGTTGATCAGA
GCACATATCCTGATTACTACTTCAGAATCACAAACAGTGAGCACATGACC
GACCTCAAAGAGAAGTTCCAGCGCATGTGTGATAAGTCGATGATAAAGAA
GAGATATATGCACCTCAACGAGGAGATACTGAAGGAGAATCCTAACATGT
GTGCTTACATGGCACCTTCTTTAGATGCGAGGCAAGACATAGTTGTGGTA
GAGGTACCAAAGCTAGGGAAAGAGGCTGCAGTGAAGGCCATAAAGGAGTG
GGGACAGCCAAAGTCAAAGATTACACACTTGATATTTTGCACCACTAGTG
GCGTGGACATGCCTGGTGCTGATTACCAGCTCACAAAACTCTTGGGACTT
CGACCCTATGTGAAGAGGTACATGATGTACCAACAAGGGTGCTTTGCAGG
AGGCACGGTTCTTCGAATGGCCAAGGATTTGGCTGAGAACAACAAGGGTG
CCCGTGTGCTTGTGGTGTGTTCTGAGATCACTGCAGTGACTTTCCGTGGG
CCAAGTGACACCCACCTAGACAGTCTTGTGGGACAGGCATTGTTTGGAGA
TGGAGCAGCTGCAGTGATTGTTGGTTCTGACCCAATTCCACAGATTGAGA
AGCCTTTGTTTGAGCTGGTTTGGACTGCACAGACCATTGCTCCAGACAGT
GATGGTGCTATTGATGGCCACCTTCGTGAAGTTGGACTCACGTTTCACCT
CCTTAAGGATGTTCCTGGGATTGTCTCAAAGAACATTGGAAAGGCACTTT
TTGAGGCCTTCAACCCATTGAACATCTCTGATTACAACTCCATCTTCTGG
ATTGCACACCCTGGTGGACCTGCAATTCTGGACCAAGTTGAGCAAAAGTT
GGGTCTGAAACCTGAAAAGATGAAGGCCACTAGAGATGTGCTTAGTGATT
ATGGGAACATGTCAAGTGCATGTGTGCTTTTCATCTTGGATGAGATGAGG
AGGAAATCAGTTGAAAATGGACTTAAAACAACAGGTGAAGGACTTGAATG
GGGTGTTTTGTTTGGTTTTGGACCTGGTCTTACCATCGAGACTGTTGTTC
TCCACAGTGTTGCAGTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR016039Thiolase-like
IPR012328Chalcone/stilbene_synt_C
IPR001099Chalcone/stilbene_synt_N
IPR011141Polyketide_synthase_type-III
IPR018088Chalcone/stilbene_synthase_AS
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0016747acyltransferase activity, transferring groups other than amino-acyl groups
GO:0016746acyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process