Phvul.002G053000.1
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Phvul.002G053000.1 vs. DB:Swiss
Match: FUCO2_ARATH (Alpha-L-fucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=FUC95A PE=1 SV=1) HSP 1 Score: 952.97 bits (2462), Expect = 0.000e+0 Identity = 482/822 (58.64%), Postives = 609/822 (74.09%), Query Frame = 1
Query: 16 LKIRFGEEGGKHWTDALPIGNGRLGAMICGHLHSETIHLNEDTLWTGTPADYTNSKAPQALSRVRNLVNRQQYPQATAAASALTGSNPSEAYQLLGDIKLDFDYSHLTGGQQSYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARLSFTLSLQSKMINQTYLN-GTNQIIMKGSCPGKRVSPQLQHS------PQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEASDWXXXXXXXXXXXXXXXXXXXXXXXXXTSACFSTLSSISNVSYSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQV-STSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEGNEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRLRPLYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITLEQTPALFEAAEKSLYKRGEEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMFVQSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWREGDLQEFGIWSEEQTRTTLTKRIHYKGTMVTTDLITGIFYKFNGQLKCLNSCSL 2457
LK+ FG ++WTDA+PIGNGRLGA I G + SE +++NEDT+WTG PADYTN KAP+AL+ VR LV+ + Y +AT+ A L+G PS+ YQ++GD+ L+FD SH Q SY+RELDL+TA KV+YSVG V F RE FAS PDQVI+ I A++ LSF +S S++ + + N NQI+M+GSC KR+ L+ S P D +G+QF++IL++++ G V+ L KL VE +DWAVLLL ASS+F PFT P DSK DP C + +SS+ SYSDLYA HL DYQ LF+RVSL L S S ++V Q ST++RV+SF+TD+DPSLVELLFQYGRYLLISSSRPGTQVANLQGIWN+D++P WDGAPHLNINL+MNYW +LP N+ ECQEPLFDY+S+L++NG KTA VNY ASGWVAH SDIWA+TS G+ +WALWPMGGAWLCTH WEHY YTMDK+FL+ K YP++EGC SFLL WLI+G +G+L+TNPSTSPEH F AP G+PA VS SSTMD+AII EVF+ +SA+E++G+T D ++ KV AQ +L P I++DGSI EW +DF+DPEVHHRH+SHLFGLFPGHTIT+E++P L +A E +L KRGEEGPGWSTTWK A WARL NS +AY+M+ + +LVDP +E ++GGLYSN+F AHPPFQIDANFGFAAAVAEM VQST DL+LLPALP +KWPNG + GL+ARGG TV+I W EG+L EFG+WSE+ ++ RI Y+G +L+ G + F+ L+C+ + L
Sbjct: 52 LKLTFGGPS-RNWTDAIPIGNGRLGATIWGGVSSEILNINEDTIWTGVPADYTNQKAPEALAEVRRLVDERNYAEATSEAVKLSG-QPSDVYQIVGDLNLEFDSSHRKYTQASYRRELDLETAVAKVSYSVGAVDFSREFFASNPDQVIIAKIYASKPGSLSFKVSFDSELHHHSETNPKANQILMRGSCRPKRLPVNLKKSINATNIPYDDHKGLQFASILEVRVS-NGGSVSSLGGKKLSVEKADWAVLLLAASSNFDGPFTMPVDSKIDPAKECVNRISSVQKYSYSDLYARHLGDYQKLFNRVSLHLSGS-----------------------STNETVQQATSTAERVRSFKTDQDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNRDIQPPWDGAPHLNINLQMNYWHSLPGNIRECQEPLFDYMSALAINGRKTAQVNYGASGWVAHQVSDIWAKTSPDRGEAVWALWPMGGAWLCTHAWEHYTYTMDKEFLKKKGYPLLEGCTSFLLDWLIKGKDGFLQTNPSTSPEHMFTAPIGKPASVSYSSTMDIAIIKEVFADIVSASEILGKTNDTLIGKVIAAQAKLPPTRISKDGSIREWAEDFEDPEVHHRHVSHLFGLFPGHTITVEKSPELAKAVEATLKKRGEEGPGWSTTWKAALWARLHNSEHAYRMVTHIFDLVDPLNERNYEGGLYSNMFTAHPPFQIDANFGFAAAVAEMLVQSTTKDLYLLPALPADKWPNGIVNGLRARGGVTVSIKWMEGNLVEFGLWSEQ----IVSTRIVYRGISAAAELLPGKVFTFDKDLRCIRTDKL 843
BLAST of Phvul.002G053000.1 vs. DB:Swiss
Match: AFCA_EMENI (Alpha-fucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=afcA PE=2 SV=1) HSP 1 Score: 318.161 bits (814), Expect = 6.345e-95 Identity = 243/787 (30.88%), Postives = 388/787 (49.30%), Query Frame = 1
Query: 70 IGNGRLGAMICGHLHSETIHLNEDTLWTGTP---ADYTNSKAPQALSRVRNLVNRQQYPQATAAASALTGS-NPSEAYQLLGDIKLDFDYSHLTGGQQSYQRELDLDTATVKVNYSVGD---VQFKREHFASYPDQVIVTNISATQNARL-SFTLSLQSKMINQTYLNGTNQIIMKGSCPGKRVSPQLQHS---PQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEASDWXXXXXXXXXXXXXXXXXXXXXXXXXTSAC--FSTLSSISNVS----YSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSV-NGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEG---NEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRLRP-LYIAQDGSIMEWVKDFKDPEVH-------HRHLSHLFGLFPGHTITL----EQTPALFEAAEKSLYKRG-----EEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMFV---QSTLSD-----LFLLPALPWEKWPNGSLKGLKARGGTTVNICW 2292
IGNG+LG + G +E ++LN D+LW+G P +YT + + + + T L GS N + ++LG+I + D Y+R LDL + ++++ + K F SYPDQV V ++ + +ARL T+S+++ ++NQ+ +++ SC + L+HS P+G++++A+ ++ + ++ V T L + L++ + + +++ +++ D + S +A S + I++ + Y L H+KDY+ L SL+L +T + S+D+S L++ + S + +P L LL Y R+LL+SSSRP + ANLQG W + L P+W H NINL+MNYW A L E Q L++Y++ V G++TA + Y ASGWV H++ +I+ T+ D WA +P AW+ H+W+++ YT D +L + Y +++G SF LS L E N+G L NP SP E + T +IH+VF L+A E I + V V+ A RL L+++ G + EW K P+ + HRHLSHL G +PG++I+ + + +A +++L RG + GW+ W+ ACWARL +SS AY ++ I + F G S + A PPFQIDANFGFA AV M V + SD + L PA+P W G KGL+ RGG V+ W
Sbjct: 46 IGNGKLGVIPFGPPDTEKLNLNVDSLWSGGPFEVENYTGGNPSSPIYDALPGIRERIFENGTGGMEELLGSGNHYGSSRVLGNITIALDGVE---AYSKYKRTLDLSDGVHRTSFTIANRTTAALKSSIFCSYPDQVCVYHLESASDARLPKVTISIENLLVNQS--------LLQTSCESEAKRAVLRHSGVTQAGPPEGMKYAAVAEV-VNPRSSVTTCLGEGALQISSRKKQLTIIIGAATNYDQKAGNAKSGWSFKNAKDPASIVDGIASAAGWKGYQRLLDRHVKDYKKLMGDFSLELPDTTD-SASKDTS-------------ELIEKYSYASATG---------NPYLENLLLDYARHLLVSSSRPNSLPANLQGRWTESLTPSWSADYHANINLQMNYWLADQTGLGETQHALWNYMADTWVPRGTETARLLYNASGWVVHNEINIFGFTAMKE-DAGWANYPAAAAWMMQHVWDNFDYTHDTAWLVSQGYALLKGIASFWLSSLQEDKFFNDGSLVVNPCNSP---------ETGPTTFGCTHYQQLIHQVFETVLAAQEYIHESDTKFVDSVASALERLDTGLHLSSWGGLKEW----KLPDSYGYDNMSTHRHLSHLAGWYPGYSISSFAHGYRNKTIQDAVKETLTARGMGNAADANAGWAKVWRAACWARLNDSSMAYDELRYAI-------DENFVGNGLSMYWGASPPFQIDANFGFAGAVLSMLVVDLPTPRSDPGQRTVVLGPAIP-SAWGGGRAKGLRLRGGAKVDFGW 775
BLAST of Phvul.002G053000.1 vs. DB:Swiss
Match: AFCA_ASPNC (Probable alpha-fucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=afcA PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 3.636e-88 Identity = 242/794 (30.48%), Postives = 365/794 (45.97%), Query Frame = 1
Query: 55 TDALPIGNGRLGAMICGHLHSETIHLNEDTLWTGTPAD---YT----NSKAPQALSRVRNLVNRQQYPQATAAASALTGSNPS-EAYQLLGDIKLDF-DYSHLTGGQQSYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARL-SFTLSLQSKMINQTYLNGTNQIIMKGSCPGKRVSPQLQHSPQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEASDWXXXXXXXXXXXXXXXXXXXXXXXXXTSACFS------------TLSSISNVSYSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSV-NGSKTAYVNYQAS-GWVAHSKSDIWARTSAGHGDVL-WALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEG---NEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRLRP-LYIAQDGSIMEWVKDFKDPEVHHRHLSHLFGLFPGHTITL--EQTPALFEAAEKSLYKRG----EEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQGGLYSNLFAAHPPFQIDANFGFAAAVAEMFVQST-----------LSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICWRE 2298
T A P+GNGRLGAM G E ++LN D+LW G P + Y+ N AL +R + + T SAL G P +YQ+L ++ +D + S + G Y+R LDLD+A ++S G+ +RE F SYPD V V +S+ N+ L T L++++ + SC G +S Q P G+ ++A + + + G + + + +KV + ++ + A FS T ++ + SYS L + H+KDYQ +F++ +L L N S D T++ + S+ DP + LLF YGRYL ISSSRPG+ NLQG+W + P W G H NINL+MN+W L E EPL+ Y++ + G++TA + Y S GWV H + + + T+ DV WA +P AW+ H+W+H+ Y+ D + YPI++G F LS L++ +G L NP SPEH P P T +I E+F L G + ++ L P ++I G I EW D HRHLS+L+G +PG+ I+ + +A E +LY RG + GW+ W++ACWA L + AY + I D E F ++++ PPFQIDANFG A+ +M ++ + D+ L PA+P W GS+ GL+ RGG V+ W +
Sbjct: 36 TTAFPLGNGRLGAMPIGSYDKEIVNLNVDSLWRGGPFESPTYSGGNPNVSKAGALPGIREWI----FQNGTGNVSALLGEYPYYGSYQVLANLTIDMGELSDIDG----YRRNLDLDSAVYSDHFSTGETYIEREAFCSYPDNVCVYRLSS--NSSLPEITFGLENQLTSPA---------PNVSCHGNSISLYGQTYPV---IGMIYNARVTVVVPGSSNTTDLCSSSTVKVPEGE-------KEVFLVFAADTNYEASNGNSKASFSFKGENPYMKVLQTATNAAKKSYSALKSSHVKDYQGVFNKFTLTL---PDPNGSADR-----------------------PTTELLSSYSQPGDPYVENLLFDYGRYLFISSSRPGSLPPNLQGLWTESYSPAWSGDYHANINLQMNHWAVDQTGLGELTEPLWTYMAETWMPRGAETAELLYGTSEGWVTHDEMNTFGHTAM--KDVAQWADYPATNAWMSHHVWDHFDYSQDSAWYRETGYPILKGAAQFWLSQLVKDEYFKDGTLVVNPCNSPEH---GPTLTPQTF--GCTHYQQLIWELFDHVLQGWTASGDDDTSFKNAITSKFSTLDPGIHIGSWGQIQEWKLDIDVKNDTHRHLSNLYGWYPGYIISSVHGSNKTITDAVETTLYSRGTGVEDSNTGWAKVWRSACWALLNVTDEAYSELSLAIQ--DNFAENGF------DMYSGSPPFQIDANFGLVGAMVQMLIRDSDRSSADASAGKTQDVLLGPAIP-AAWGGGSVGGLRLRGGGVVSFSWND 758
BLAST of Phvul.002G053000.1 vs. DB:Swiss
Match: AFCA_ASPOR (Probable alpha-fucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=afcA PE=3 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 2.224e-57 Identity = 213/791 (26.93%), Postives = 319/791 (40.33%), Query Frame = 1
Query: 58 DALPIGNGRLGAMICGHLHSETIHLNEDTLWTGTPADYT-------NSKAPQALSRVRNLVNRQQYPQATAAASALTG-SNPSEAYQLLGDIKLDFDYSHLTGGQQSYQRELDLDTATVKVNYSVGDVQFKREHFASYPDQVIVTNISATQNARLSFTLSLQSKMINQTYLNGTNQIIMKGSCPGK--RVSPQLQHSPQDTPQGIQFSAILDLKIGGKNGVVTVLDDNKLKVEA-------------SDWXXXXXXXXXXXXXXXXXXXXXXXXXTSACFSTLSSISNVSYSDLYAHHLKDYQDLFHRVSLKLMRSTQLNISEDSSLELKKLVPTVANLSLVDSVTQVSTSDRVKSFQTDEDPSLVELLFQYGRYLLISSSRPGTQVANLQGIWNKDLEPTWDGAPHLNINLEMNYWPALPCNLSECQEPLFDYLSSLSVNGSKTAYVNYQASGWVAHSKSDIWARTSAGHGDVLWALWPMGGAWLCTHLWEHYAYTMDKDFLEYKAYPIMEGCVSFLLSWLIEGNEGYLETNPSTSPEHNFIAPNGEPACVSQSSTMDVAIIHEVFSKFLSAAEVIGRTKDNIVRKVSEAQPRL-RPLYIAQDGSIMEW----VKDFKDPEVHHRHLSHLFGLFPGHTITLE----QTPALFEAAEKSLYKRG---EEGPGWSTTWKTACWARLQNSSNAYKMIKRLINLVDPDHEIPFQG-GLYSNLFAAHPPFQIDANFGFAAAVAEMFV----------QSTLSDLFLLPALPWEKWPNGSLKGLKARGGTTVNICW 2292
+A +GNG+LG M G +E ++LN D LW G P + NS + LS VR+ + + + T S L G ++ ++ L ++ + D Y R LDL T YS G ++ + + SYP QV + +++T A LS +++ ++ L +C R+ Q P P+G+ + I I G+ T KL + A +D+ A++ ++ P++ + TS+ S S S L H++DY L +L L + + + EL L+ + +TD DP L +LLF YGR+L ISSSR + NLQG+W+ W G H NINL+MN W A L E +F NY W+ A ++L+ GGA TH D + I G+ G L NP TSPE + T +IH+V+ + AE+ G T +++ + + PRL + L+I G I EW D++ HRHLSHL G +PG +++ + A SL RG GW W++ACWARL N+ A+ ++ I D I G LYS FQIDANFG+ AV M V + + + L PA+P W GS+KGL+ RGG +V+ W
Sbjct: 31 EAYTLGNGKLGVMPFGEPGAEKLNLNHDELWEGGPFEVNGYRGGNPNSSMTEILSEVRDEI----WKKGTGNDSRLHGDTDGYGSFHSLANLTIAIDGIDKV---SDYTRSLDLGTGIHTTTYSTGKGKYTTDVYCSYPAQVCIYKLNST--ATLSKVTIYFDQLVEESSL-------WNATCDSDFARLRGVTQEGP---PRGMTYDTIARSSIPGRCDSST----GKLAINARNSSSLTIVIGAGTDFDGTKGTAATDYTFKGEDPAEYVEKITSSALSQ-------SESKLRTEHIEDYSGLMSAFTLDLP-----DTQDSTGTELSTLIT------------------NYNANKTDGDPYLEKLLFDYGRHLFISSSRANSLPPNLQGVWSPTKNAAWSGDYHANINLQMNLWGAEATGLGELTVAVF----------------NYMEQNWMPRG---------AETAELLY-----GGAGWVTH-----------DEMN------------------IFGHTGSLVVNPCTSPEQ---------GPTTFGCTHWQQLIHQVYENAIQGAEIAGETDSTLLKDIKDQLPRLDKGLHIGTWGQIKEWKLPDSYDYEKEGNEHRHLSHLVGWYPGWSLSSYFNGYNNATIQSAVNTSLISRGVGLYTNAGWEKVWRSACWARLNNTEKAHYELRLTI-----DQNIGQSGLSLYSGGDTPSGAFQIDANFGYLGAVLSMLVVDMPLDSTHSEDDVRTVVLGPAIP-AAWAGGSVKGLRLRGGGSVDFSW 694 The following BLAST results are available for this feature:
BLAST of Phvul.002G053000.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 4
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.002G053000.1_Pv_G19833_v2.1 >Phvul.002G053000.1_Pv_G19833_v2.1 ID=Phvul.002G053000.1_Pv_G19833_v2.1; Name=Phvul.002G053000.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=826bpback to top mRNA from alignment at Chr02:4828039..4833990- Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.002G053000.1_Pv_G19833_v2.1 ID=Phvul.002G053000.1_Pv_G19833_v2.1; Name=Phvul.002G053000.1; organism=Phaseolus vulgaris; type=mRNA; length=5952bp; location=Sequence derived from: Chr02:4828039..4833990- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr02:4828039..4833990- >Phvul.002G053000.1_Pv_G19833_v2.1 ID=Phvul.002G053000.1_Pv_G19833_v2.1; Name=Phvul.002G053000.1; organism=Phaseolus vulgaris; type=CDS; length=2478bp; location=Sequence derived from: Chr02:4828039..4833990- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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