Phvul.004G101900.1

Transcript Overview
NamePhvul.004G101900.1
Unique NamePhvul.004G101900.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr04supercontigChr04:34848674..34850814 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR235Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL626Pisum sativum Cameor genome v1aPisum sativum
pvvuR460Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
capvL299Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL351Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
aspvL297Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL303Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL432Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR428Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR456Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR451Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR403Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR434Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR370Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR402Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR502Vicia sativa cv. Studenica genome v1.0Vicia sativa
carpvL329Cicer arietinum
carpvL788Cicer arietinum
pvvumR474Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR482Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR458Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR481Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR516Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR476Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR519Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR389Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR415Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR423Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.004G101900Phvul.004G101900_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G101900.1Phvul.004G101900.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.004G101900.1_Pv_G19833_v2.1Phvul.004G101900.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.004G101900.1.v2.1.CDS.1Phvul.004G101900.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.004G101900.1.v2.1.CDS.2Phvul.004G101900.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.004G101900.1.v2.1.CDS.3Phvul.004G101900.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.004G101900.1.v2.1.CDS.4Phvul.004G101900.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS


Homology
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY4_ARATH (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 6.329e-34
Identity = 78/191 (40.84%), Postives = 102/191 (53.40%), Query Frame = 1
Query:  157 ITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTI-GNKEVTWRKGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVLR 687
            + Q+ H+ IDH  L  C DGL DV   ST VTISNN+F   DKVMLLGHDD Y+ D+ M+VT+ +N F P   +             +N Y+ W  Y IG S    + SE N FVAP    +K+VT R     +  +WK+ + RDVF NG +F    G  V+ L    E  F+V     V  +T S+G LR
Sbjct:  173 VFQSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDMRVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEKRSSKQVTKRMMAGPDSKRWKWGTSRDVFMNGAFFG-PPGVIVRPLYKGGE-GFRVAHGSLVPSLTSSAGPLR 361          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY1_HESAR (Pectate lyase 1 OS=Hesperocyparis arizonica OX=49011 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 1.129e-33
Identity = 80/184 (43.48%), Postives = 99/184 (53.80%), Query Frame = 1
Query:  181 IDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIG-NKEVTWRKGNDKNE--DKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVL 684
            IDHN+L DC DGL DVT GST +TISNN F N  KVMLLGHDD Y  D++MKVTV +N F PN  Q             +N Y  W  Y IG S   ++ SE N F AP     KEVT R G +       W + S RD F NG YF  +   +   + +S E  FKV +      +T ++GV+
Sbjct:  184 IDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDQWNIYAIGGSSNPTILSEGNSFTAPNESYKKEVTKRIGCETTSACANWVWRSTRDAFTNGAYFVSSGKAEDTNIYNSNEA-FKVENGNAAPQLTQNAGVV 366          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY2_ARATH (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.142e-33
Identity = 78/192 (40.62%), Postives = 104/192 (54.17%), Query Frame = 1
Query:  157 ITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVA---PTIGNKEVTWRKGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVL 684
            I  + H+ IDH     CQDGL DV   ST VTISNN+F   DKVMLLGH+D  V D+ M+VT+ +NHF P   +             +N Y+ W  Y IG S + ++ SE N FVA   P+   K+VT R  +  +  +WK+ + +DVF+NG YF  +  G V  L    ER F V     V  +T S+G L
Sbjct:  188 IFDSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHDKVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSADPTIFSEGNYFVASDDPS--KKQVTKRIDSGYDWKRWKWRTSKDVFKNGAYFVPSGYGTVTPLYGRAER-FPVSHGSLVPLLTSSAGPL 376          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY1_JUNAS (Pectate lyase 1 OS=Juniperus ashei OX=13101 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 3.417e-33
Identity = 80/184 (43.48%), Postives = 100/184 (54.35%), Query Frame = 1
Query:  181 IDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIG-NKEVTWRKGNDKNE--DKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVL 684
            IDHN+L DC DGL DVT GST +TISNN F N  KVMLLGHDD Y  D++MKVTV +N F PN  Q             +N Y  W  Y IG S   ++ SE N F AP+    KEVT R G +       W + S RD F NG YF  +   +   + +S E  FKV +      +T ++GV+
Sbjct:  184 IDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPSESYKKEVTKRIGCESPSACANWVWRSTRDAFINGAYFVSSGKTEETNIYNSNEA-FKVENGNAAPQLTKNAGVV 366          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY1_JUNVI (Pectate lyase 1 OS=Juniperus virginiana OX=39584 PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 4.674e-33
Identity = 82/186 (44.09%), Postives = 101/186 (54.30%), Query Frame = 1
Query:  181 IDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIG-NKEVTWRKGNDKNE--DKWKFHSIRDVFENGPYFNVTKGGDVKKLN--DSKERNFKVVDAKFVRFITHSSGVL 684
            IDHN+L DC DGL DVT GST +TISNN F N  KVMLLGHDD Y  D++MKVTV +N F PN  Q             +N Y  W  Y IG S   ++ SE N F AP     KEVT R G +       W + S RD F NG YF     G +++ N  +S E  FKV +      +T ++GV+
Sbjct:  184 IDHNSLSDCSDGLIDVTLGSTGITISNNHFFNHHKVMLLGHDDTYDDDKSMKVTVAFNQFGPNAGQRMPRARYGLVHVANNNYDPWNIYAIGGSSNPTILSEGNSFTAPNENYKKEVTKRIGCESTSACANWVWRSTRDAFSNGAYF--VSSGKIEETNIYNSNEA-FKVENGNAAPQLTKNAGVV 366          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana OX=3702 GN=At3g24670 PE=2 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 5.087e-33
Identity = 81/218 (37.16%), Postives = 115/218 (52.75%), Query Frame = 1
Query:  109 GNDLIHYKVSH------SSDDPIT--QTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHF-------EPNCNQSNF------YQGWLQYGIGRSMERSLKSEANPFVAPTIGN---KEVTWRKGNDKNE-DKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVLR 687
            GN ++    SH      +  D I+   + H+ IDHN+L +C DGL D   GST +TISNN+  + ++VML+GH D Y RD+ M+VT+ YNHF        P C    F      Y  W+ Y IG S   ++ S+ N F+AP  GN   KEVT R G+ + E  +W + S  D+  NG YF  TK G     + ++  +     A  V  +T+SSG L+
Sbjct:  220 GNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYMTHHNEVMLMGHSDSYTRDKLMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRFLAP--GNPFAKEVTKRVGSWQGEWKQWNWRSQGDLMLNGAYF--TKSGAAAPASYARASSLGAKPASVVSMLTYSSGALK 433          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY9_ARATH (Probable pectate lyase 9 OS=Arabidopsis thaliana OX=3702 GN=At3g24230 PE=2 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.834e-32
Identity = 78/191 (40.84%), Postives = 100/191 (52.36%), Query Frame = 1
Query:  157 ITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFE-------PNCNQSNF------YQGWLQYGIGRSMERSLKSEANPFVAP-TIGNKEVTWRKGNDKNE-DKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVL 684
            I  + H+ IDHN+L +C DGL DV  GST +TISNN F + D+VMLLGH+D Y RD+ M+VTV YNHF        P C    F      Y  W  Y IG S   ++ S+ N F AP     KEVT R     NE  +W + S +D+  NG +F  +  G      DS+  +     A  V  IT S+G L
Sbjct:  256 IFGSSHIWIDHNSLSNCTDGLVDVVNGSTAITISNNHFTHHDEVMLLGHNDSYTRDKMMQVTVAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWKMYAIGGSANPTINSQGNRFAAPKNHSAKEVTKRLDTKGNEWMEWNWRSEKDLLVNGAFFTPSGEG---ASGDSQTLSLPAKPASMVDAITASAGAL 443          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY16_ARATH (Probable pectate lyase 16 OS=Arabidopsis thaliana OX=3702 GN=At4g22080 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 5.946e-32
Identity = 82/217 (37.79%), Postives = 112/217 (51.61%), Query Frame = 1
Query:   94 MINNIGNDLIHYKVSHSSDDPITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIGN-KEVTWR--KGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVLRYNK 696
            M+ +    + H K S      I  + ++ IDH  L  C DGL DV   ST +TISNN+F   DKVMLLGH+D +V+D  MKVTV +NHF P   +             +N Y  W+ Y IG S + ++ SE N F+A    N KEVT R  KG   N   W++ + +DVF+NG YF  +  G +     S +R F V     V  +T  +G L  N+
Sbjct:  177 MVRSSPTHVGHRKGSDGDAIAIFGSSNIWIDHCYLASCTDGLIDVIHASTGITISNNYFTQHDKVMLLGHNDDFVQDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSNSKEVTKREVKGGWNN---WRWRTSKDVFKNGAYFVPSGYGSISLPYSSAQR-FTVAPGNLVPSLTADAGPLNCNR 389          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY1_CRYJA (Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE=1 SV=3)

HSP 1 Score: 120.168 bits (300), Expect = 8.435e-31
Identity = 78/187 (41.71%), Postives = 100/187 (53.48%), Query Frame = 1
Query:  181 IDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIG-NKEVTWRKG--NDKNEDKWKFHSIRDVFENGPYFNVT---KGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVL 684
            IDHN+  +  DGL DVT  ST VTISNN F N  KVMLLGHDD Y  D++MKVTV +N F PNC Q             +N Y  W  Y IG S   ++ SE N F AP     K+VT R G     +   W + S +DVF NG YF  +   +GG++     +K+  F V +      +T ++GVL
Sbjct:  184 IDHNSFSNSSDGLVDVTLTSTGVTISNNLFFNHHKVMLLGHDDAYSDDKSMKVTVAFNQFGPNCGQRMPRARYGLVHVANNNYDPWTIYAIGGSSNPTILSEGNSFTAPNESYKKQVTIRIGCKTSSSCSNWVWQSTQDVFYNGAYFVSSGKYEGGNIY----TKKEAFNVENGNATPQLTKNAGVL 366          
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Match: PLY17_ARATH (Putative pectate lyase 17 OS=Arabidopsis thaliana OX=3702 GN=At4g22090 PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.532e-30
Identity = 79/207 (38.16%), Postives = 107/207 (51.69%), Query Frame = 1
Query:  124 HYKVSHSSDDPITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLGHDDRYVRDETMKVTVVYNHFEPNCNQ-------------SNFYQGWLQYGIGRSMERSLKSEANPFVAPTIG-NKEVTWR--KGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVKKLNDSKERNFKVVDAKFVRFITHSSGVLRYNK 696
            H K S      I  + ++ IDH  L  C DGL DV   ST +TISNN+F   DKVMLLGH+D +V+D  MKVTV +NHF P   +             +N Y  W+ Y IG S + ++ SE N F+A     +KEVT R  KG   N   W++ +  DVF+NG +F  +  G +     S +R F V     V  +T  +G L  N+
Sbjct:  187 HRKGSDGDAITIFGSSNVWIDHCYLASCTDGLIDVIHASTAITISNNYFTQHDKVMLLGHNDNFVKDVKMKVTVAFNHFGPGLVERMPRVRRGYAHVANNRYDKWIMYAIGGSADPTIFSEGNYFIASDKSYSKEVTKREVKGGWNN---WRWRTSNDVFKNGAFFVPSGYGSIPLPYSSAQR-FTVAPGNLVPSLTADAGPLNCNR 389          
The following BLAST results are available for this feature:
BLAST of Phvul.004G101900.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
PLY4_ARATH6.329e-3440.84Probable pectate lyase 4 OS=Arabidopsis thaliana O... [more]
PLY1_HESAR1.129e-3343.48Pectate lyase 1 OS=Hesperocyparis arizonica OX=490... [more]
PLY2_ARATH1.142e-3340.63Putative pectate lyase 2 OS=Arabidopsis thaliana O... [more]
PLY1_JUNAS3.417e-3343.48Pectate lyase 1 OS=Juniperus ashei OX=13101 PE=1 S... [more]
PLY1_JUNVI4.674e-3344.09Pectate lyase 1 OS=Juniperus virginiana OX=39584 P... [more]
PLY10_ARATH5.087e-3337.16Probable pectate lyase 10 OS=Arabidopsis thaliana ... [more]
PLY9_ARATH1.834e-3240.84Probable pectate lyase 9 OS=Arabidopsis thaliana O... [more]
PLY16_ARATH5.946e-3237.79Probable pectate lyase 16 OS=Arabidopsis thaliana ... [more]
PLY1_CRYJA8.435e-3141.71Pectate lyase 1 OS=Cryptomeria japonica OX=3369 PE... [more]
PLY17_ARATH2.532e-3038.16Putative pectate lyase 17 OS=Arabidopsis thaliana ... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018082AmbAllergenPRINTSPR00807AMBALLERGENcoord: 136..155
score: 40.48
coord: 207..230
score: 23.02
coord: 176..200
score: 32.57
IPR002022Pectate lyaseSMARTSM00656amb_allcoord: 2..159
e-value: 8.7E-7
score: 23.4
IPR002022Pectate lyasePFAMPF00544Pec_lyase_Ccoord: 53..121
e-value: 2.8E-8
score: 33.6
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 32..229
e-value: 7.0E-35
score: 122.6
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..30
score: 5.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 45..192

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.004G101900.1_Pv_G19833_v2.1

>Phvul.004G101900.1_Pv_G19833_v2.1 ID=Phvul.004G101900.1_Pv_G19833_v2.1; Name=Phvul.004G101900.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=237bp
MNVIDRCWGQNPEWWRHQSQLAISFVTCACKMINNIGNDLIHYKVSHSSD
DPITQTKHLKIDHNTLYDCQDGLFDVTRGSTDVTISNNWFKNQDKVMLLG
HDDRYVRDETMKVTVVYNHFEPNCNQSNFYQGWLQYGIGRSMERSLKSEA
NPFVAPTIGNKEVTWRKGNDKNEDKWKFHSIRDVFENGPYFNVTKGGDVK
KLNDSKERNFKVVDAKFVRFITHSSGVLRYNKHSIY*
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mRNA from alignment at Chr04:34848674..34850814+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.004G101900.1_Pv_G19833_v2.1 ID=Phvul.004G101900.1_Pv_G19833_v2.1; Name=Phvul.004G101900.1; organism=Phaseolus vulgaris; type=mRNA; length=2141bp; location=Sequence derived from: Chr04:34848674..34850814+ (Phaseolus vulgaris
ATGAATGTTATTGATCGTTGTTGGGGACAAAATCCTGAATGGTGGAGACA CCAATCTCAGTTAGCCATAAGTTTTGTGACTTGTGCTTGCAAGATGATAA ATAACATTGGTAATGACCTTATTCATTATAAAGTTAGTCACTCTAGTGAT GATCCTATAACCCAAACCAAACACCTTAAGGTATGAGTTCATCATTGTAT GTGATCCGGTCGGTCATCGGTAGTCGGTGACATCAGCAACAGATAGCCAC GTGGACCATTCTTAGTGGGACGCGTGGGCTAGGGAAGCAGATGTTTCATT GAGAGGGTCACCCAGGGGTGATCGGTGATTAGGGGTGGTGATCAGAGAGG ATCGCGATCAGCGCCTAGATAAGCACCTGGAAGCAGAAGGCATGGCACTA TGGTGTACCGATCGGTCATCTGGTGTGAGCGATGATTATCGGTCATCGGT GTATTGTCATCGGGTCTTCGTGTTACACGCAGTTAAGCTGGGGACAAAGG GTGATTCCTAGCGAGAGCGTTGCATGCGAAACCTTGCGTGACAGAGTGTC AGAGAAAGGAGAAGTTATGTGCCTTGTAGTGTCGTGCACGAGAGTGGCCT AAGATAGCTGGTAAGCCAGTCGGTGAGTGGTGCTCTCTCAACCCATAACG TGCATGGTGCAAAGCAGAGGTGATCGTTCACACTGAGGTTGCACGAGCCA CCTAGTTGAAGAAACGCGCTAAGTTACTTCATGCACGGATAACTTAGGCG TGCAACAGAGGTGCGCTTGGACCCTCAGATGGTGCCACGTGTAAGGTGAG ATGTGAGTCACATGTCTCCACGCGTTACCATCTGGAGAGAGGTTCGGCCA AAAGTATATAAAGGACATTCCGCGCTCATGCAGGGAAGGTAAGATTCATT CTTGCAAGTTACTCGTTACACACAGAGAGAAAGAGAATCACAGAGTGCAC ACGGGTCTCGCTGAGATTCTTAGTTTGTAGTTCTTTGGTGGTTTTGCAAG GCTGACTTGAGCGTCGGAGTGGAATCGGCCGCTAGAGGCGCCGTTTGGTG TGTTTTGCAGGTTGGCTTGGAGTTCTTGTGGAGTTCTTGGAGTGTTCTTG CACTTGTCGCGGTCGAGGAGGAGGAGGATAGAGTTTGACGTGGCGAATCC TTCGACGTTCGAATCCCCTGCGAGATCAGTATGCATTGCATATTTAATGA TTATAGGCCATAACATAATTATCCATGGAATTCGAGTTCATCATTGAACA CCTCAAGCTCCCGGGATCGTAATGGGGCCTGAAGGAAAGGTGATTCCTTT AGGCCATGTAGACAGGGATGCAATAAGATTGGTAATGACTTCAAAGATTT AGATTGACCATAATACACTTTATGATTGTCAAGATGGTTTGTTTGATGTA ACAAGAGGTTCCACTGATGTGACTATCTCCAATAATTGGTTCAAAAACCA AGATAAAGTTATGCTTCTTGGACATGATGATAGGTATGTGAGAGACGAGA CTATGAAGGTTACTGTGGTGTATAACCATTTTGAACCTAATTGTAATCAA TGTATACCAAGGTAAATAGTTGTTAGAATAAGTAGTTAAAAATAAACAAA GTAATAAGCAATCTTATATGCTCTTACTAATAAACAAATTAATTTTCTAG GATTTGCTATGGATATGCACACGTAGCAAGCAAATTTTTATCAAGGATGG CTTCAATATGGCATTGGTAGAAGCATGGAACGTAGTCTTAAAAGTGAAGC TAACCCCTTTGTAGCACCGACAATAGGAAATAAAGAGGTAATAAATTTTA GAAATTTCATTTTGATGTATTTGATATTCAATTGATGATTAATCACTTAA GTATTTATATATATATATATTATAAAGATATTATTAACTGTTATGCTAAT GATTTTTTATGTGTAGGTGACGTGGAGAAAGGGTAATGATAAAAATGAAG ATAAATGGAAATTTCATTCGATAAGGGACGTTTTTGAAAATGGACCTTAC TTTAATGTAACAAAAGGAGGAGATGTGAAAAAATTGAATGATAGCAAAGA ACGAAATTTTAAAGTTGTTGATGCCAAATTCGTGAGATTTATAACACATT CATCTGGTGTTCTGCGATACAATAAACATTCTATATATTGA
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Coding sequence (CDS) from alignment at Chr04:34848674..34850814+

>Phvul.004G101900.1_Pv_G19833_v2.1 ID=Phvul.004G101900.1_Pv_G19833_v2.1; Name=Phvul.004G101900.1; organism=Phaseolus vulgaris; type=CDS; length=711bp; location=Sequence derived from: Chr04:34848674..34850814+ (Phaseolus vulgaris
ATGAATGTTATTGATCGTTGTTGGGGACAAAATCCTGAATGGTGGAGACA
CCAATCTCAGTTAGCCATAAGTTTTGTGACTTGTGCTTGCAAGATGATAA
ATAACATTGGTAATGACCTTATTCATTATAAAGTTAGTCACTCTAGTGAT
GATCCTATAACCCAAACCAAACACCTTAAGATTGACCATAATACACTTTA
TGATTGTCAAGATGGTTTGTTTGATGTAACAAGAGGTTCCACTGATGTGA
CTATCTCCAATAATTGGTTCAAAAACCAAGATAAAGTTATGCTTCTTGGA
CATGATGATAGGTATGTGAGAGACGAGACTATGAAGGTTACTGTGGTGTA
TAACCATTTTGAACCTAATTGTAATCAATCAAATTTTTATCAAGGATGGC
TTCAATATGGCATTGGTAGAAGCATGGAACGTAGTCTTAAAAGTGAAGCT
AACCCCTTTGTAGCACCGACAATAGGAAATAAAGAGGTGACGTGGAGAAA
GGGTAATGATAAAAATGAAGATAAATGGAAATTTCATTCGATAAGGGACG
TTTTTGAAAATGGACCTTACTTTAATGTAACAAAAGGAGGAGATGTGAAA
AAATTGAATGATAGCAAAGAACGAAATTTTAAAGTTGTTGATGCCAAATT
CGTGAGATTTATAACACATTCATCTGGTGTTCTGCGATACAATAAACATT
CTATATATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR018082AmbAllergen
IPR002022Pec_lyase
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence