Phvul.006G087800.1

Transcript Overview
NamePhvul.006G087800.1
Unique NamePhvul.006G087800.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:19982244..19984992 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR253Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL233Pisum sativum Cameor genome v1aPisum sativum
pspvL630Pisum sativum Cameor genome v1aPisum sativum
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR555Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0295Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL235Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL360Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0911Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0959Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL215Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL437Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR510Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR532Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR582Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR573Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR483Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR523Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR649Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR663Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL403Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL225Cicer arietinum
carpvL338Cicer arietinum
ccapvL290Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL381Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR581Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR617Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR584Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR631Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR620Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR640Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR613Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR627Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR640Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR480Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR510Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR512Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
XM_058884559.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat03G0060900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.05G124300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
jg3291.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_014661847.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004495631.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Cc_v2.0_08290.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_08G01400.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Psat06G0409900-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigun06g097500.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Cc_v2.0_03912.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
LR48_mrnaVigan02g164600Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-TanjilR_01047Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigan.05G156700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigun06g097500.2Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
evm.model.Chr06.1112Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vum_05G01269.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Va09G045360.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Ca_07958.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Psat6g151440.1Pisum sativum Cameor genome v1aPisum sativum
Ca_01127Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
evm.model.Chr07.1380Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Va02G051840.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
Vfaba.Hedin2.R1.5g177080.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
rna-XM_004494514.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Ca_03652Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
LR48_mrnaVigan09g147400Vigna angularis Jingnong 6 genome v1.1Vigna angularis
XM_058887198.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat3g011880.1Pisum sativum Cameor genome v1aPisum sativum
Vigan.08G175200.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Vigst.08G136200.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vfaba.Tiffany.R1.5g138920.1Vicia faba cv. Tiffany genome v1.0Vicia faba
rna-KK1_010420Cajanus cajan Asha genome v1.0Cajanus cajan
rna-XM_014657510.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
jg31068.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
Vigun07g143000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Vigun07g143000.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr06.1475Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
PvulFLAVERTChr07.1001268Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Phvul.007G198400.1Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G087800Phvul.006G087800_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G087800.1_Pv_G19833_v2.1Phvul.006G087800.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide
Phvul.006G087800.1Phvul.006G087800.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G087800.1.v2.1.five_prime_UTR.1Phvul.006G087800.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G087800.1.v2.1.CDS.1Phvul.006G087800.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G087800.1.v2.1.CDS.2Phvul.006G087800.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G087800.1.v2.1.CDS.3Phvul.006G087800.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G087800.1.v2.1.three_prime_UTR.1Phvul.006G087800.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 2.288e-69
Identity = 130/283 (45.94%), Postives = 164/283 (57.95%), Query Frame = 1
Query:    7 VLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCNPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVG----KQRSLGTVCIHSCRKTNTTTSFPFPR-----------------KLEDEEWSEIELGSFYTHY----SNEEVRMCLKEVKGAHLKGGLIVDGIEIRPKHLE 780
            +LP  C A ILSFT+P D   S+ VSS+ +   DSD VWEKFLP++Y  ++SR        SSKK L+  LC    ID+G KIF IEK SGKI Y+LS+R LSI W +   YWSW P   SRF E  +L    WLEI G I +G LS NT YGAYL +K   RAYGLDL+P+E S++VG    K +S    C+ + +K      F   R                 ++ D+ W EIELG F T       ++EV M L EVKG  LKGG+ +DGIE+RPK L+
Sbjct:    2 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDN-KKQQMERVFYGQREQRMATHEVVRSHRREPEVRDDGWMEIELGEFETGSGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPKPLK 283          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: VBF_ARATH (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.307e-61
Identity = 125/281 (44.48%), Postives = 161/281 (57.30%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCNPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVGK---QRSLGTVCIHSCRKTNTTTSFPFPR--------------------KLEDEEWSEIELGSFYTHYS-NEEVRMCLKEVKGAHLKGGLIVDGIEIRPK 771
            M +LP  C A+IL+FTSP D   SS VSS+ +   DSD VWEKFLPS+Y  ++S+     ++ SSKK ++  LC+   ID+  K+F I K SGKI Y+LSAR +SI   +   YWSW     SRF ESAEL     LEI+G I + +LSANT YGAYL VK    AYGLDL+P+E S++       +S   +C    +K      F   R                    K  D+ W EIELG F T    ++EV M L EVKG  LKGG+++DGIE+RPK
Sbjct:    1 MMMLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKNGQISKSATYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKCRDDGWMEIELGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 3.011e-60
Identity = 123/280 (43.93%), Postives = 159/280 (56.79%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCNPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVG---KQRSLGTVCIHSCRKTNTTTSFPFPR--------------------KLEDEEWSEIELGSFYTHYS-NEEVRMCLKEVKGAHLKGGLIVDGIEIRP 768
            M +LP  C A+IL+FTSP D   SS VSS+ +   DSD VWEKFLPS+Y  ++S+        SSKK ++  LC+   ID+  K+F I K SGKI Y+LSAR +SI + +   Y SW     SRF ESAEL T   LEIKG I + +LS NT YGAYL +K  + AYGLDL+P+E SV+       ++   +C    +K      F   R                    K  D+ W EIELG F T    ++EV M L EVKG  LKGG+++DGIE+RP
Sbjct:    1 MMMLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKNGQNNKNTTYLCCLDEKKQQMKRLFYGNREERMAMTVEAVGGDGKRREPKARDDGWLEIELGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 2.165e-57
Identity = 113/261 (43.30%), Postives = 154/261 (59.00%), Query Frame = 1
Query:   10 LPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLC-NPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADR-AYGLDLLPSEVSVEVGKQRSLGTVCIHSCR---KTNTTTSFPFPRKLEDEEWSEIELGSFYTHYSNEEVRMCLKEVKGAHLKGGLIVDGIEIRPKHL 777
            LP +C A ++SFTSP D CR S VS +++S ADS+  WE+FLPS+Y      ++ +S S  S K LF   C +P  I+DG   F +EKRSGK C++LSAR+L I W +SP +W W     SRFEE A L  + W EI+G I++ +LS  T Y AYL  K  +  ++G + LP EVS      RS  T   ++ R   K+ T  S        ++ W EIELG +Y  + +EE+ M + E +    KGG+IV GIEIRPK L
Sbjct:    6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRM----YIDNSLSRFSNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVSF-----RSTRTEVYNNRRVFLKSGTQES-------REDGWLEIELGEYYVGFDDEEIEMSVLETREGGWKGGIIVQGIEIRPKEL 250          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 1.767e-56
Identity = 105/262 (40.08%), Postives = 146/262 (55.73%), Query Frame = 1
Query:   10 LPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCN-PRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVE-VGKQRSLGTVCI-HSCRKTNTTTSFPFPRKLEDEEWSEIELGSFYTH---YSNEEVRMCLKEVKGAHLKGGLIVDGIEIRPKHL 777
             P DC ++I+SFT+P+D C ++ VS   +S   SD +WEKFLP++Y  ++      S     KK L+  LCN P   DD  K   +EK SGK C +LSA  LSI WG++P YW W P   SRFE+ A+LR + W EI+G  N+ +LS  T Y AY+  K  D+ YG   +  E +V  VG++ S   +C   + R+       P   K  ++ W EIELG F+       N+E+ M   E K  + K GLI+ GIEIRP  +
Sbjct:   17 FPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPSRVFSS----KKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSRRLICFSEAIRRGRRNVVKP---KQREDGWMEIELGEFFNDGGIMDNDEIEMSALETKQLNRKCGLIIQGIEIRPAKI 271          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 7.216e-53
Identity = 108/260 (41.54%), Postives = 144/260 (55.38%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCNPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVGKQRSLGTVC---IHSCRKTNTTTSFPFPRKLEDEEWSEIELGSFYTHYSN-EEVRMCLKEVKGAHLKGGLIVDGIEIRP 768
            M  LP DC A ILS T+P DVCR S VSSI +S A SD VW  FLP+++    + F + +   + K+  FS++ NP  I+     FS+E++SG  CY+++AR L+I WG+   YW W     +RF E AEL  +WWLEI G IN  +LS +TLY AY   K     YG    P E S+ +    S   V    + S  + +       P  L  + W E+ELG F+    +  E+ M LKE KG + K GLIV GIEIRP
Sbjct:    1 MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADF---PAGFAAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYGFR-QPVETSLVLADTESTDNVVQPSMISLMQDSGGEEGQSP-VLRRDGWYEVELGQFFKRRGDLGEIEMSLKETKGPYEKKGLIVYGIEIRP 255          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana OX=3702 GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 7.791e-53
Identity = 110/264 (41.67%), Postives = 147/264 (55.68%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLC-NPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVGKQRS-------LGTVCIHSCRKTNTTTSFPFPRKLEDEEWSEIELGSFYTHYSNEEVRMCLKEVKGAHLKGGLIVDGIEIRP 768
             +VLP DC ++I+SFTSP+D C ++ VS   +S   SD VW+KFLP  Y  +VSR    +     KK L+  LC NP  I+DG K F +EK SGK C +LS+++L I WG+SP YW W     SRF + AEL  + W EI+G  ++ +LS  T Y AY+  KT DR  GL  LP EV + +  Q S       +G       R+T   T    P + ED  W E ELG F+     +E+   + E+K    K GLI+ GIE RP
Sbjct:   61 FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSRVFAS----KKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIYFIGPRDRRGRRETRDVTK---PDQRED-GWMEAELGEFFNEERCDEIEFSVIEIKSPSWKSGLIIQGIEFRP 316          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 4.114e-51
Identity = 110/307 (35.83%), Postives = 157/307 (51.14%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLF-SMLCNPRPIDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTAD-RAYGLDLLPSEVSVE-VGKQRSLGTVCIHSCRKTN--------------TTTSFPFPR--------------------------KLEDEEWSEIELGSFYTHY------SNEEVRMCLKEVKGAHLKGGLIVDGIEIRPKH 774
             + LP DC + ++S TSP+D C  + VS  V+S A SD VWE FLPS Y  +V +  +       KK +F S+  N   +++G K F +EK SGK CY+LSA +L+I WG+SP YW W     S+FE+ AELR + W E++G I+ GMLS  T Y  Y+  KTA+ R+YG DL+P E  V  VGK  +  +V   S    +               + +F   R                          K   + WSE+ELG FY +        ++E+ + + E +  + K GLI+ GIEIRP+ 
Sbjct:   32 FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSANHLS----KKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRSATSHYSGISYAMVSRAFRMRRPWMQVQREEEEEVEGERERGMNVVGPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPER 334          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 166.777 bits (421), Expect = 7.985e-49
Identity = 100/259 (38.61%), Postives = 145/259 (55.98%), Query Frame = 1
Query:   10 LPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLC-NPRPIDDGNKIFSIEKRSGKICYLLSARQ-LSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVE-VGK---QRSLGTVCIHSCRKTNTTTSFPFPRKLEDEEWSEIELGSFYTHYSNEEVRMCLKEVKGAHLKGGLIVDGIEIRP 768
            LP DC ++I+SFTSP+D C ++ VS   +S  +SD+VW+KFLPS+Y  +V      S     KK L+  +C NP  ++DG K F +EK +GK C++LS ++ + I W ++P YW W     +RFEE  EL  + W E++G +N+  LS  T Y AY+  KT +    L  +P E +V  VG+   QR +  V     R+   T     P K +D  W E ELG F+     + V   + E+K  + K GLI+ GIE RP
Sbjct:   50 LPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPSRVFSS----KKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQESSQRHIYFVGPSDQRRDRETRDVTRPTKRKD-GWMEAELGQFFNESGCDVVDTSILEIKTPYWKRGLIIQGIEFRP 303          
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Match: PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.517e-45
Identity = 103/272 (37.87%), Postives = 146/272 (53.68%), Query Frame = 1
Query:    1 MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYHQIXXXXXXXXXXXXXKKHLFSMLCNPRP-IDDGNKIFSIEKRSGKICYLLSARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSANTLYGAYLKVKTADRAYGLDLLPSEVSVEVGKQRSLGTVCIHSC---------RKTNTTTSFPFPRKLEDEEWSEIELGSFYTH---YSNEEVRMCLKEVKGAHLKGGLIVDGIEIRPKHL 777
            ++ LP +C + I+SFTSPQD C  + VS    S   SD VWEKF+P  Y  ++S+  +  F    KK L+  LC+    IDDG K   IEK + K C ++SA  L+IAWGNSP  W W P   +RFE  AEL  +   EI+G INS ++S  T Y AY+  K  +  YG + +  EV V V  Q    +   + C         R+ +   +   P + +D  W EI++G F+      +++E+ M   E K  H K GLI+ GIEIRP ++
Sbjct:   36 LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFKFLS--KKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWRWIPDPQARFETVAELLEVCLFEIRGRINSRVISPKTRYSAYIVYKKLNICYGFENVAVEVVVGVVGQDLEESCRRYICFDETMDEQFRRRDRGKNLVKPERRKD-GWMEIKIGEFFNEGGLLNDDEIEMVALEAKQRHWKRGLIIQGIEIRPTNI 304          
The following BLAST results are available for this feature:
BLAST of Phvul.006G087800.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
P2B15_ARATH2.288e-6945.94F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3... [more]
VBF_ARATH2.307e-6144.48F-box protein VBF OS=Arabidopsis thaliana OX=3702 ... [more]
P2B13_ARATH3.011e-6043.93F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3... [more]
P2B12_ARATH2.165e-5743.30Putative F-box protein PP2-B12 OS=Arabidopsis thal... [more]
P2B10_ARATH1.767e-5640.08F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3... [more]
P2B11_ARATH7.216e-5341.54F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3... [more]
FB95_ARATH7.791e-5341.67F-box protein At2g02240 OS=Arabidopsis thaliana OX... [more]
PP2B1_ARATH4.114e-5135.83F-box protein PP2-B1 OS=Arabidopsis thaliana OX=37... [more]
PP2B2_ARATH7.985e-4938.61Putative F-box protein PP2-B2 OS=Arabidopsis thali... [more]
PP2B8_ARATH1.517e-4537.87Putative F-box protein PP2-B8 OS=Arabidopsis thali... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainSMARTSM00256fbox_2coord: 4..44
e-value: 0.0054
score: 25.9
IPR001810F-box domainPFAMPF00646F-boxcoord: 4..44
e-value: 1.0E-5
score: 25.3
IPR001810F-box domainPROSITEPS50181FBOXcoord: 1..44
score: 10.133
NoneNo IPR availableGENE3D1.20.1280.50coord: 1..72
e-value: 3.2E-7
score: 32.2
IPR025886Phloem protein 2-likePFAMPF14299PP2coord: 94..256
e-value: 8.6E-50
score: 168.6
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 2..74

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G087800.1_Pv_G19833_v2.1

>Phvul.006G087800.1_Pv_G19833_v2.1 ID=Phvul.006G087800.1_Pv_G19833_v2.1; Name=Phvul.006G087800.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=268bp
MEVLPYDCFAHILSFTSPQDVCRSSLVSSIVQSMADSDAVWEKFLPSNYH
QIVSRFVSSSFSCSSKKHLFSMLCNPRPIDDGNKIFSIEKRSGKICYLLS
ARQLSIAWGNSPLYWSWKPTQGSRFEESAELRTIWWLEIKGSINSGMLSA
NTLYGAYLKVKTADRAYGLDLLPSEVSVEVGKQRSLGTVCIHSCRKTNTT
TSFPFPRKLEDEEWSEIELGSFYTHYSNEEVRMCLKEVKGAHLKGGLIVD
GIEIRPKHLEKASAYGP*
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mRNA from alignment at Chr06:19982244..19984992+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G087800.1_Pv_G19833_v2.1 ID=Phvul.006G087800.1_Pv_G19833_v2.1; Name=Phvul.006G087800.1; organism=Phaseolus vulgaris; type=mRNA; length=2749bp; location=Sequence derived from: Chr06:19982244..19984992+ (Phaseolus vulgaris
TGTGCATTGAGAATTTTTATTTTGCTACTCTTTTTCCGTAAATTGTTTTC ATAAGATGGAAGTTTTGCCCTACGATTGCTTTGCACACATTTTATCGTTC ACTTCTCCGCAGGACGTGTGCAGGTCCTCTCTCGTCTCCTCCATTGTGCA GTCCATGGCAGATTCAGATGCTGTGTGGGAGAAGTTTTTGCCATCCAATT ATCATCAAATTGTTTCTAGGTTCGTCTCCTCCTCATTCTCCTGTTCTTCG AAGAAGCACTTGTTTTCCATGTTATGTAACCCGCGACCCATTGACGATGG TAACAAGGTAATGATTTTCTTCCGTGTTTCTCCCTTTCTTTCTCAATGCA TGATTGCAAATGGTAAAGGCTCATAGCAAAACCACAATTTGGTCGAATGT AAATTCTCATCCAAGAGGTTGCATAATCTACCAAAACCTTGTGCACTTGC TAGAGTCTTTATAAGTGGCAACCTCTCGTGCAAAACGTTGTATTTGGAAA TTTAATGTCGTTTGGGTAATGTCATTGTTATTTATAATGATGGATAAAAT GATCACACCCTACCCCACCACTGACACACACACACCCCACATGGCCCTTT TATACTTACAGTGGCAATTGTGTTTGACTATGCAAATGCATAATAATGAT GGCAACTGGCATTGGCAAGAAGGGCCCTGTGATTTTTATTTTTTTTTATG TTTAAAACTGTAAATCTCTAAATGATTAGTAGCATTCTAGTAGAACAAAT GTGTTTTTTTAACAAATTAAAGTAACTTTATAGGTTAATTATTAAAATTG ATAAAAAAAATTAAAAATTATTAAAATAAATAAATTATAACAATTTAATA CAATTTAATTAAAAATGCAATTGTTAATCTCTTAAAAATGTGTTTATGAA AAAGTTAAAATGCAATTGTTAATCTAGTAAAAATGCTTAAATTACAAGAA AGATAGTAGTATAGTATTAACAAATCAATGCAGCACCCAAATTTAACATA AAAGTGAAAATATTGCAAATAAATACAATTGTTGGTAAAGTTTAAGGTTG ATGAGGTATCCTCAGGCGGTGGAGCAAATATGAATTATTTAAATATTGAT AATTCATATTTGTGGCACTGTCTGTGGTTGCTAAATCACCTTTTTTTATA TTTTTAATAAATATCTATCATATTTTTTAAAAGATAAATTATTAAAATAT ATTACAACAACAAAGAAATATGACGACGGTTTCCCATTGGAAGGATATAC AGAAGGTACGAGCATTTAATTAAAATTTACGTATTTATACAATAAATAAA CCATACATGTTCTTTTCCTAATGTAAGTTTAATATTTGATCCATTACTAA AAAAACCTTACTTTTAATTCCTATATATATAGTTAAAAATATGTTATTTT AATCTCTACCCGTATAATTTATAATTTTTGTAGTCCTTGTTGTAAAGTTA AAATTTATTAAATGGCATTTGAGTCTAAAGAAGGTATGAAATGGTTGTGA GGAATACAGATATTCTCCATTGAGAAGAGAAGTGGGAAAATATGTTACCT GTTGAGCGCAAGACAACTTTCAATTGCATGGGGAAACAGCCCTCTCTATT GGTCCTGGAAACCCACCCAAGGTTCAAGGTTTGTTTCTTTCTTCTTAATC ATCATCATCATCATCCCAATTCTCTACCACTTTTTCTTTTCTTTTCTCTT TTCACTGTAACTTTCCACTTTAACGTCTTCATAAGGTGTCATTGTCAAGT CCTAACACTATCAATATTTTTTTTCTAATAATAATAAAGTAAAATTGTTT ATTTAATTAGAGTTAAATAGTGTTTGTCAAGTGAAAATAATTGACAAAAA ATTATTTCAACAAACTTTTAATATTATTATTATTATAACGAGTCATCATT ACTAATTGCAAATTCATTTGATATTTGCGTGCAGATTTGAAGAATCAGCA GAACTGAGAACCATATGGTGGCTGGAAATAAAGGGCAGCATTAACAGCGG AATGTTATCTGCCAATACTTTATACGGAGCCTACTTGAAAGTGAAAACCG CGGATCGTGCTTATGGGTTGGACTTGTTACCGTCGGAGGTGTCGGTAGAA GTTGGCAAACAAAGATCACTAGGAACTGTTTGCATACATTCATGTCGCAA AACAAACACCACAACCTCTTTTCCTTTTCCTCGTAAGCTTGAAGATGAAG AATGGTCGGAGATTGAGTTGGGGAGTTTCTACACCCATTATTCAAATGAA GAGGTCAGAATGTGTCTCAAGGAAGTCAAAGGTGCGCACTTAAAAGGTGG CCTCATAGTTGATGGAATTGAAATAAGGCCCAAACACTTGGAAAAGGCCT CGGCTTATGGGCCCTAACCAGTTTATATTTTTTTTCAATTTTGTGCGTTG TGGGCCGAACCGGATACTTGTTTTCTTGCTTTTTCCCGTGTAGCCCTACT ACCAATACTGTAGGCGCTCTCTTTAAAAACCTCGTATGCGGTTTCGCAAT TGCAATTCTCACTACGCGCCGTGGTGGTGTTCTTCTTCCTTGTATAAGGT TTTTCACTTGGTTCTTTCAGATTGGTTTTTTATTATGTGTTTACTCAACC CTAATCTTTCGATGTGTCTTCTTTGTTATTATGCTTCCATTTTGTTCATT CGCAATGATGAGAAATGTGATTCCCAGCTCATTATGAGACCTTTTTAAGG TCTGGGAATGGAATTTTCCACATCTATCTGAGCTTCTATGAGAACAATT
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Coding sequence (CDS) from alignment at Chr06:19982244..19984992+

>Phvul.006G087800.1_Pv_G19833_v2.1 ID=Phvul.006G087800.1_Pv_G19833_v2.1; Name=Phvul.006G087800.1; organism=Phaseolus vulgaris; type=CDS; length=804bp; location=Sequence derived from: Chr06:19982244..19984992+ (Phaseolus vulgaris
ATGGAAGTTTTGCCCTACGATTGCTTTGCACACATTTTATCGTTCACTTC
TCCGCAGGACGTGTGCAGGTCCTCTCTCGTCTCCTCCATTGTGCAGTCCA
TGGCAGATTCAGATGCTGTGTGGGAGAAGTTTTTGCCATCCAATTATCAT
CAAATTGTTTCTAGGTTCGTCTCCTCCTCATTCTCCTGTTCTTCGAAGAA
GCACTTGTTTTCCATGTTATGTAACCCGCGACCCATTGACGATGGTAACA
AGATATTCTCCATTGAGAAGAGAAGTGGGAAAATATGTTACCTGTTGAGC
GCAAGACAACTTTCAATTGCATGGGGAAACAGCCCTCTCTATTGGTCCTG
GAAACCCACCCAAGGTTCAAGATTTGAAGAATCAGCAGAACTGAGAACCA
TATGGTGGCTGGAAATAAAGGGCAGCATTAACAGCGGAATGTTATCTGCC
AATACTTTATACGGAGCCTACTTGAAAGTGAAAACCGCGGATCGTGCTTA
TGGGTTGGACTTGTTACCGTCGGAGGTGTCGGTAGAAGTTGGCAAACAAA
GATCACTAGGAACTGTTTGCATACATTCATGTCGCAAAACAAACACCACA
ACCTCTTTTCCTTTTCCTCGTAAGCTTGAAGATGAAGAATGGTCGGAGAT
TGAGTTGGGGAGTTTCTACACCCATTATTCAAATGAAGAGGTCAGAATGT
GTCTCAAGGAAGTCAAAGGTGCGCACTTAAAAGGTGGCCTCATAGTTGAT
GGAATTGAAATAAGGCCCAAACACTTGGAAAAGGCCTCGGCTTATGGGCC
CTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR025886PP2-like
IPR036047F-box-like_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding