Phvul.006G103100.1

Transcript Overview
NamePhvul.006G103100.1
Unique NamePhvul.006G103100.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr06supercontigChr06:21257514..21264116 +Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvR252Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL233Pisum sativum Cameor genome v1aPisum sativum
pspvL630Pisum sativum Cameor genome v1aPisum sativum
pvvuR536Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR554Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0294Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0430Cicer arietinum ICC 4958 genome v2Cicer arietinum
crpvL276Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
crpvL390Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
capvL235Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL360Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0730Cajanus cajan Asha genome v1.0Cajanus cajan
ccpvL0913Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0491Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0781Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0961Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1308Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL314Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR510Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR532Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR572Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR582Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR563Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR573Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR523Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR470Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR488Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR649Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR663Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL217Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL328Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL133Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL403Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL225Cicer arietinum
carpvL338Cicer arietinum
ccapvL290Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL381Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR581Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR582Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR617Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR583Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvvaR631Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR620Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR640Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR641Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR627Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR640Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR642Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR501Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR508Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR494Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR511Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
Ca_07598.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Va09G047850.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-KK1_011057Cajanus cajan Asha genome v1.0Cajanus cajan
jg30844.t1Vicia sativa cv. Studenica genome v1.0Vicia sativa
rna-XM_004494658.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
Vum_08G01748.1Vigna umbellata FF25 genome v1.0Vigna umbellata
LR48_mrnaVigan10g154200Vigna angularis Jingnong 6 genome v1.1Vigna angularis
Vfaba.Hedin2.R1.5g185960.1Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
Ca_01245Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Vigun06g114100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
Cr_07533.1Cicer reticulatum L. PI489777 genome v1Cicer reticulatum
Vigan.05G137700.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Cc_v2.0_08441.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Vum_05G01113.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vfaba.Tiffany.R1.5g145960.1Vicia faba cv. Tiffany genome v1.0Vicia faba
Vigan.08G226800.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
XM_058884619.1Vicia villosa cv. AU Merit genome v1.0Vicia villosa
Psat03G0030800-T1Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
Vigst.05G109300.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
evm.model.Chr06.1250Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Vigst.08G191800.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
rna-TanjilR_10846Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Vigun06g114100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr06.1569Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.006G103100Phvul.006G103100_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G103100.1Phvul.006G103100.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.006G103100.1_Pv_G19833_v2.1Phvul.006G103100.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G103100.1.v2.1.five_prime_UTR.1Phvul.006G103100.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR
Phvul.006G103100.1.v2.1.five_prime_UTR.2Phvul.006G103100.1.v2.1.five_prime_UTR.2_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G103100.1.v2.1.CDS.1Phvul.006G103100.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G103100.1.v2.1.CDS.2Phvul.006G103100.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G103100.1.v2.1.CDS.3Phvul.006G103100.1.v2.1.CDS.3_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G103100.1.v2.1.CDS.4Phvul.006G103100.1.v2.1.CDS.4_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G103100.1.v2.1.CDS.5Phvul.006G103100.1.v2.1.CDS.5_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.006G103100.1.v2.1.CDS.6Phvul.006G103100.1.v2.1.CDS.6_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.006G103100.1.v2.1.three_prime_UTR.1Phvul.006G103100.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


Homology
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: FLK_ARATH (Flowering locus K homology domain OS=Arabidopsis thaliana OX=3702 GN=FLK PE=1 SV=1)

HSP 1 Score: 498.049 bits (1281), Expect = 3.311e-172
Identity = 284/421 (67.46%), Postives = 326/421 (77.43%), Query Frame = 1
Query:   76 EEAVVA--EKRWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINMQIANPHHPEHM-PPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSYYPPAEI---PVERQPHQGISAYGRDASIGVHASSNAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFMXXXXXXXXXXXXXXXXXXXXXXXXYNSYPAHASVYASPPSNPGHAGGYSSVYGANYGY 1320
            E+A V   EKRWPGWPGE+VFRMLVPAQKVG IIGRKG+ IKKIVEETRAR+KILDGPPGT +RAVM+SGK++P+SSLPP++DGLLRVH RI+DGL+ + +  P     KVST+LLV ASQAGSLIGKQGGTVK+IQEAS CIVRVLG+EDLP+FALQDDRVVEVVG+   VH+ALELIASHLRKFLVDRS+IP FE  MQ       +HM PPHQSWGPPQG  P+ GGG     P  YM PP + DSYYPP E+   P+E+QPHQGISAYGR+  + VH SS   + P V  Q+TQQMQIPLSYADAVIGT+G++ISY RR SGATVTIQE RGVPGEMTVE+SGT SQVQTA QLIQNFM    A AG             +QGYN Y  H SVYA+ P+NP   GGY++ Y + YGY
Sbjct:  169 EDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAP--PPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDRSIIPFFENQMQKPT-RQMDHMPPPHQSWGPPQGHAPSVGGGGYGHNPPPYMQPPPRHDSYYPPPEMRQPPMEKQPHQGISAYGREPPMNVHVSS---APPMVAQQVTQQMQIPLSYADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM----AEAGAPAPAQPQTVAPEQQGYNPYATHGSVYAAAPTNP--PGGYATDYSSGYGY 577          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PEP_ARATH (RNA-binding KH domain-containing protein PEPPER OS=Arabidopsis thaliana OX=3702 GN=PEP PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 1.598e-92
Identity = 168/393 (42.75%), Postives = 240/393 (61.07%), Query Frame = 1
Query:    4 AEVDQNTSAE---NDTEETVEAELQGGEEAVVAEKRWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINM--QIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSYYPP------AEIPVERQPHQGISAYGRDASIGV-HASSNAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQNFM 1146
            A +D+N+ A    N  +    AE    +    AE+RWPGWPG+ VFRM+VP  KVG IIGRKG+FIKK+ EETRAR+K+LDGP  T  R V+ISGK++P++ + PA+D +LRV +R+    ++D     +  +   S +LLVA++QA +LIGKQG  +KSI E S   VR+L  E+ P +A QD+R+V++ G+A  + KALE I  HLR+FLVD +V+P+FE     +++     E +   +S                    S  M P   L +   P      + +    QP  G+S Y +D  +   H+   A+ + + VTQ++Q MQIP SYA+ +IG  GA+I+YIRR SGAT+TI+E+   P ++TVEI GT SQVQTA+QLIQ F+
Sbjct:   31 ALLDENSGAFPELNQPDSLAAAETTFPDTNDSAEERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDHTVVPLFEKQYLARVSQTRQEEPLAESKS--------------SLHTISSNLMEPDFSLLARREPLFLERDSRVDSRVQP-SGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANIAYIRRRSGATITIKESPH-PDQITVEIKGTTSQVQTAEQLIQEFI 407          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP3_HUMAN (Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606 GN=PCBP3 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 5.990e-19
Identity = 93/357 (26.05%), Postives = 153/357 (42.86%), Query Frame = 1
Query:  127 VFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESD----FTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPI----------------FEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSYYPPAEIPVERQPHQGISAYGRDASIGVHASSNAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQ 1137
              R+L+  ++VG IIG+KGE +KK+ EE+ AR+ I +G     +R V I+G            D + +    I    E D     +++P+ +   V+ +L+V ASQ GSLIGK G  +K I+E++   V+V G + LP      +R V + G  + + + ++ I   + +     + IP                 + I  Q A PH  +    HQ                         PP  Q +  +P  ++P+     +  +  G+ +  G+ AS  A          T ++ IP      +IG  G  I+ IR+ SGA + I  A     E  + I+GT + +  AQ LI 
Sbjct:   47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG-DMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQ-----------------LAMQQTPFPPLGQTNPAFPGEKLPLHSS-EEAQNLMGQSS--GLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP3_MOUSE (Poly(rC)-binding protein 3 OS=Mus musculus OX=10090 GN=Pcbp3 PE=1 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 6.104e-19
Identity = 91/357 (25.49%), Postives = 151/357 (42.30%), Query Frame = 1
Query:  127 VFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESD----FTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPI----------------FEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSYYPPAEIPVERQPHQGISAYGRDASIGVHASSNAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQEARGVPGEMTVEISGTASQVQTAQQLIQ 1137
              R+L+  ++VG IIG+KGE +KK+ EE+ AR+ I +G     +R V I+G            D + +    I    E D     +++P+ +   V+ +L+V ASQ GSLIGK G  +K I+E++   V+V G     +     +R V + G  + + + ++ I   + +     + IP                 + I  Q A PH  +    HQ                         PP  Q +  +P  ++P+     +  +  G+ +  G+ AS  A          T ++ IP      +IG  G  I+ IR+ SGA + I  A     E  + I+GT + +  AQ LI 
Sbjct:   47 TIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG----------PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD----MLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQ-----------------LAMQQTPFPPLGQTNPAFPGEKLPLHSS-EEAQNLMGQSS--GLDASPPAS---------THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLIN 358          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP1_RABIT (Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus OX=9986 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.468e-18
Identity = 100/356 (28.09%), Postives = 160/356 (44.94%), Query Frame = 1
Query:  130 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDF--THTPSGAAGK--VSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSY-------YPPAEIP----VERQPHQGISAYGRDASIGVHASS----NAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQE-ARGVPGEMTVEISGTASQVQTAQQLIQ 1137
             R+L+  ++VG IIG+KGE +K+I EE+ AR+ I +G     +R + ++G            + + +    IID LE D   + T S AA +  V+ +L+V A+Q GSLIGK G  +K I+E++   V+V G + LP      +R + + G    V + ++ I   + + L       +  I      P+ P  MP         G    +              PP  LD+Y         P ++     V RQ       +G     G+ +SS       ++    TQ T ++ IP +    +IG  GA+I+ IR+ SGA + I     G  G   V I+G+A+ +  AQ LI 
Sbjct:   16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGP----------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTI------PYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPP--LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN 344          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP1_MOUSE (Poly(rC)-binding protein 1 OS=Mus musculus OX=10090 GN=Pcbp1 PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.468e-18
Identity = 100/356 (28.09%), Postives = 160/356 (44.94%), Query Frame = 1
Query:  130 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDF--THTPSGAAGK--VSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSY-------YPPAEIP----VERQPHQGISAYGRDASIGVHASS----NAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQE-ARGVPGEMTVEISGTASQVQTAQQLIQ 1137
             R+L+  ++VG IIG+KGE +K+I EE+ AR+ I +G     +R + ++G            + + +    IID LE D   + T S AA +  V+ +L+V A+Q GSLIGK G  +K I+E++   V+V G + LP      +R + + G    V + ++ I   + + L       +  I      P+ P  MP         G    +              PP  LD+Y         P ++     V RQ       +G     G+ +SS       ++    TQ T ++ IP +    +IG  GA+I+ IR+ SGA + I     G  G   V I+G+A+ +  AQ LI 
Sbjct:   16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGP----------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTI------PYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPP--LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN 344          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP1_HUMAN (Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606 GN=PCBP1 PE=1 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.468e-18
Identity = 100/356 (28.09%), Postives = 160/356 (44.94%), Query Frame = 1
Query:  130 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDF--THTPSGAAGK--VSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSY-------YPPAEIP----VERQPHQGISAYGRDASIGVHASS----NAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQE-ARGVPGEMTVEISGTASQVQTAQQLIQ 1137
             R+L+  ++VG IIG+KGE +K+I EE+ AR+ I +G     +R + ++G            + + +    IID LE D   + T S AA +  V+ +L+V A+Q GSLIGK G  +K I+E++   V+V G + LP      +R + + G    V + ++ I   + + L       +  I      P+ P  MP         G    +              PP  LD+Y         P ++     V RQ       +G     G+ +SS       ++    TQ T ++ IP +    +IG  GA+I+ IR+ SGA + I     G  G   V I+G+A+ +  AQ LI 
Sbjct:   16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGP----------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTI------PYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPP--LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN 344          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: PCBP1_BOVIN (Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 GN=PCBP1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.468e-18
Identity = 100/356 (28.09%), Postives = 160/356 (44.94%), Query Frame = 1
Query:  130 FRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDF--THTPSGAAGK--VSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRKFLVDRSVIPIFEINMQIANPHHPEHMPPHQSWXXXXXXXXXXXXXXXXXXXSQYMPPPRQLDSY-------YPPAEIP----VERQPHQGISAYGRDASIGVHASS----NAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTIQE-ARGVPGEMTVEISGTASQVQTAQQLIQ 1137
             R+L+  ++VG IIG+KGE +K+I EE+ AR+ I +G     +R + ++G            + + +    IID LE D   + T S AA +  V+ +L+V A+Q GSLIGK G  +K I+E++   V+V G + LP      +R + + G    V + ++ I   + + L       +  I      P+ P  MP         G    +              PP  LD+Y         P ++     V RQ       +G     G+ +SS       ++    TQ T ++ IP +    +IG  GA+I+ IR+ SGA + I     G  G   V I+G+A+ +  AQ LI 
Sbjct:   16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGP----------TNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAG-DMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMTI------PYQP--MPASSPVICAGGQDRCSDAAGYPHATHDLEGPP--LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQ-VTITGSAASISLAQYLIN 344          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: RCF3_ARATH (RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana OX=3702 GN=RCF3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 4.253e-16
Identity = 59/194 (30.41%), Postives = 99/194 (51.03%), Query Frame = 1
Query:   97 KRWPGWPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISG--KDDPDSSLP---PAVDGLLRVHKRIIDGLESDFTH------------TPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAE-DLPIFALQDDRVVEVVGDANGVHKALELIASHLRK 624
            K  P     + +R+L    K GG+IG+ G  IK I + T A + + +  PG A+R + IS   + DPD  +P   PA + L  VH RI++  E+ F +                  G+V T+L+V+    G L+GK G  ++ ++  +   +R+L  E +LP      + +V++VG+ N V  AL +++S LR+
Sbjct:   59 KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRRRDPDGRMPSFSPAQEALFSVHDRILES-EAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAIVSSRLRE 251          

HSP 2 Score: 69.3218 bits (168), Expect = 2.876e-11
Identity = 50/184 (27.17%), Postives = 89/184 (48.37%), Query Frame = 1
Query:  112 WPGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKAL----ELIASHLRKFLVDRSVIP 651
            +  E VF++L PA K+  ++G     I  +  E    V++ D   G+ ++ + IS ++ PD    PA + LL +  +IID +              ++T+LLV +  +  L GK  G+V  I   +   V++L  E++P  A  +D V+++ G+     +AL     L+ SH+ K L  +   P
Sbjct:  321 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLI--------PDKDNLITTRLLVPSRDSICLEGK-AGSVSEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPP 495          
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Match: Y4837_ARATH (KH domain-containing protein At4g18375 OS=Arabidopsis thaliana OX=3702 GN=At4g18375 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 9.132e-15
Identity = 56/185 (30.27%), Postives = 94/185 (50.81%), Query Frame = 1
Query:  127 VFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMI--------------SGKDDPDSSLPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLP----IFALQDDRVVEVVGDANGVHKALELIASHLRKF 627
            V+R+L P   VGG+IG+ G+ I  I   T+A++K+ D   G +QR + I                +++P   L  A D LL+V+  I+   E + T T          +LLV  SQ+ SLIGK G  +K I+  +   V+V+ ++D+     + A++ D VV + G+   V +AL  +++ + K 
Sbjct:   37 VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEP---LCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVV-SKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKI 217          

HSP 2 Score: 57.7658 bits (138), Expect = 1.167e-7
Identity = 45/170 (26.47%), Postives = 81/170 (47.65%), Query Frame = 1
Query:  121 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDG--PPGTAQRAVMISGKDDPDSSLPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALELIASHLRK 624
            E VF++L P   +  +IG+ G  IK+I E + + +++ D     G  +  ++++  + PD     AV+ +L + + I D             A  V  +LLV++   G +IGK G  +  I++ +N         ++ I   + D +VEV G+ + V  AL  I   LR+
Sbjct:  311 ELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYIND-----------EDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTN--------ANICISKGKKDDLVEVSGEVSSVRDALIQIVLRLRE 461          
The following BLAST results are available for this feature:
BLAST of Phvul.006G103100.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
FLK_ARATH3.311e-17267.46Flowering locus K homology domain OS=Arabidopsis t... [more]
PEP_ARATH1.598e-9242.75RNA-binding KH domain-containing protein PEPPER OS... [more]
PCBP3_HUMAN5.990e-1926.05Poly(rC)-binding protein 3 OS=Homo sapiens OX=9606... [more]
PCBP3_MOUSE6.104e-1925.49Poly(rC)-binding protein 3 OS=Mus musculus OX=1009... [more]
PCBP1_RABIT3.468e-1828.09Poly(rC)-binding protein 1 OS=Oryctolagus cuniculu... [more]
PCBP1_MOUSE3.468e-1828.09Poly(rC)-binding protein 1 OS=Mus musculus OX=1009... [more]
PCBP1_HUMAN3.468e-1828.09Poly(rC)-binding protein 1 OS=Homo sapiens OX=9606... [more]
PCBP1_BOVIN3.468e-1828.09Poly(rC)-binding protein 1 OS=Bos taurus OX=9913 G... [more]
RCF3_ARATH4.253e-1630.41RNA-binding KH domain-containing protein RCF3 OS=A... [more]
Y4837_ARATH9.132e-1530.27KH domain-containing protein At4g18375 OS=Arabidop... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 132..207
e-value: 2.2E-12
score: 57.2
coord: 313..383
e-value: 4.8E-9
score: 46.1
coord: 40..120
e-value: 2.6E-8
score: 43.6
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10coord: 301..388
e-value: 1.3E-17
score: 65.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 134..209
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 304..385
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 35..94
NoneNo IPR availableGENE3D3.30.310.210coord: 41..212
e-value: 3.2E-35
score: 123.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 235..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..267
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 41..108
score: 14.886
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 314..378
score: 14.886
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 133..202
score: 14.99
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 135..203
e-value: 6.14256E-18
score: 75.5907
NoneNo IPR availableCDDcd00105KH-Icoord: 316..379
e-value: 7.20306E-13
score: 61.0367
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 43..112
e-value: 5.12011E-16
score: 70.1979
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 44..95
e-value: 2.1E-12
score: 46.7
coord: 136..203
e-value: 4.5E-14
score: 52.0
coord: 316..379
e-value: 6.7E-12
score: 45.1

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.006G103100.1_Pv_G19833_v2.1

>Phvul.006G103100.1_Pv_G19833_v2.1 ID=Phvul.006G103100.1_Pv_G19833_v2.1; Name=Phvul.006G103100.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=441bp
MAEVDQNTSAENDTEETVEAELQGGEEAVVAEKRWPGWPGESVFRMLVPA
QKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTAQRAVMISGKDDPDSS
LPPAVDGLLRVHKRIIDGLESDFTHTPSGAAGKVSTKLLVAASQAGSLIG
KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDANGVHKALE
LIASHLRKFLVDRSVIPIFEINMQIANPHHPEHMPPHQSWGPPQGLPPNA
GGGPGFGPPSQYMPPPRQLDSYYPPAEIPVERQPHQGISAYGRDASIGVH
ASSNAQSAPSVVTQITQQMQIPLSYADAVIGTAGASISYIRRASGATVTI
QEARGVPGEMTVEISGTASQVQTAQQLIQNFMAEAAAAAGGAPAQPQAGG
PAVEQGYNSYPAHASVYASPPSNPGHAGGYSSVYGANYGY*
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mRNA from alignment at Chr06:21257514..21264116+

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.006G103100.1_Pv_G19833_v2.1 ID=Phvul.006G103100.1_Pv_G19833_v2.1; Name=Phvul.006G103100.1; organism=Phaseolus vulgaris; type=mRNA; length=6603bp; location=Sequence derived from: Chr06:21257514..21264116+ (Phaseolus vulgaris
ATCGATCTAACTATCTTTCTGCTCCATCAGTTTCTGATATATAAGACTGT TTCCTTTCATTCATCACAGTTTTTCTGTTCTCTCACACTTGCCTTTCTTC TTCTTCTTCTTCTCCTCAACTCAAAACCCTAGATTCGTAACTGTTCCTCT TCGTCCTTCCAATCAAGGTAATTTCGCACACTATGCTCACTTGTTTAATA ATTTATTAATCATTTCTCATGGCAATTAGGTGCTTCCCCTTTAGATCCAG TTGATTTGAATCATCCTTCGTGCTATGCAGTTCCTTCGAGATAGCATGTG ATGTTTTGTTTGTAGTATCTGTAATTTGCTTGCTGTGTGTTTTTGCAGTG AAAACCTCGATGGCTGAAGTGGATCAGAACACGAGCGCTGAGAATGATAC GGAGGAAACAGTTGAGGCGGAATTGCAGGGTGGCGAGGAGGCGGTTGTTG CTGAGAAGAGGTGGCCGGGGTGGCCTGGGGAGAGTGTGTTTCGGATGTTA GTTCCTGCGCAGAAGGTTGGGGGCATAATCGGACGTAAAGGAGAGTTCAT TAAGAAAATTGTGGAGGAGACTCGAGCTCGCGTTAAAATTCTTGATGGTC CTCCTGGAACTGCGCAAAGGGCTGTAAGTCTCTTCTACTTCACTTCTCGT GATTCTCATACACTCTAACTTCTTCAATTCCGCTTATGTGTATCTTGCTG TCTAGTTACTTGCAACTTTGTTTCTTTTTTCTTTTGTTGAGGGAATACGG TTTGATATTATTTTGTTGTTCATATTCCAGCTGCTTGTTGTTGGGCTAGT ATTTATCTGGAATCTTTAACGTGCTCTTGTGCTTTTTTTTTTCTTTCTGT AATGCATTTATTTTATATTATGACCGAGAGGTTTTGATTGAGCTTCTCGG AGATTGGAATAGTGGAAATGTTGATGCTATTTGCTTTTCCTTGGAGGTAC ATGGGATAGCATTGAGTTATATGTTTTATCCATAGTTTAACAATTATTGA ATTAGATATCAGAAATGAACAGAAACTGAGAAACTGTTTGAACTCATGCG GTCTCCTTTTCTGAATTTAGGGCTAATGTGGTAGATGTTTACCTTATACG TATGCATTGGGGTATTCTCTATTTAGTCTTTGTCCTAATTGCTTATAATA TTTACATTAGAAAACATTAGGAGAGTCAACGTTCCTTTGCATATATTGGA GGTTTGATTCCTCTTGAAGAACTGGAATTTATGTTTCGTGCATCACTTCA GAGTAGCTCTAGTGGTGCTAATTTTCTAGTGGAATTGAGATTGTTGTTGG TCAATGATGTTATGATGGATAACAGATAGTGGTTGTGTTTCCTTCAGCTA TCTTTCATGACATTTCCAGTGTCCACTTGGTTGTACCCAGAATTTTTAAT TAAAAATATTACAGCAATAAAAGATATAGCTTTTTCATGGTCTAAAAGTC TAAAGTGGGACCTTACTCATGTGCTACAGTAAAAAAGAAAAAAAAACTAA GGTGAAGAAGATGAAGCTAATTCGAAATGAAGACTAATGGCAAGAATCCA CAGAATATGAATATAATTCTAACGGGAAATGAATCTGTGCAGGGTCAATG TTCCAATTTTAAAGGCAACGACTCAATCATCAATTAGGTCCCAATATTGA AGAACCAAAGTTCCAGATGCAGGGATCAGCATTGAGCATTGCAAAGTGCT GAAAAGTTTGTTAACATGTACCACGAAGCTCTGCATTCCATCTGGTAAAT TCAAAACCTGGATGATTGATGTCTTGCCGCAGATTGCAAGCAATGAAAAG AAGCTTATAACCAAATCTAATACTATACTTAAACCATCAAAACTGAAGTA TTTTTTATTGTTATACATGTTATGGAAAAAAAGGATACCGAAAACTACTT AAGTATCAATCAACTCAATCATAGCACATGGAGCTTCTCCGTATTAAATG ATAGTTATCATAGTAGTTCTTTACTAGATAATCTTGACCATACTGTTATG TAATTAGCTAAATGCACTCTCGTAAACTGAGATTCAAATATTAAGGAGTT AGAAGACACTTCCACTGTGACGTGCATCTTACATCTTGTGACATGTTATA AAAGTTATTGCTCAATTAAAGTTATTATGTTTCAGCTTGAGACTTCCATT GTTGCAAGCAATTCTTAAATCTGTTTTAGTTGGTTTAATAAAAGCAGCGA GGAGGACTTTTTTGTGGTATATGTAATTTATGGAGCTATTCATATATTGG TAGAAGAGGGCTTGGAAGGGAAATTTAAGGTGATATGCTTATAGATCACT ACTCAAGTAAGAAAAATGGGGGGAATGCCTAGGAAACTGTATATAAGGTG TAGAAACGGGGGAGGAAGGAAAGGTGGTTCTTGGTCAGGTGAAGAATTAG GGCTGTGCAAGCTTTAAATTATACCTTAGATTTCCATGATTAAGTCTAAA CTCACATTTTGAGGTTTATTGAAGATGCTCATTAAGGTCTCATCTGAATC ACGTTCCATCTATTCATCCTACTTGCTTCTAATGAACATTGTGCTTCCAT GGCTGGCACTTAACCAAAAGTTGTTTAACATTTTAATTTTCAGATTTTAC TATCTGGTAAGGTTAAATTATTAAGAAGGACCTGATGGTGAATAAATACA CTTGAGCATTTGGGTATTAGTAAGCTTAATGGTATGTGATTCCTGTAGCC GATCTCACTTAGTGGGCTGAGACAATTATTGCTATTGTACCATCAGATCA GGTTGTTATGTAGATTAATTAGGTGAAGAGTTATTGTGATAAGGTCTTGA TCACAATGAGCTGTGGAACTGTTAGAAAACTGTCTGATGGTGAATGATTT CTTCTGGCATCTTGTTGATAAGTAAGGATATAGAGATTAATTGCGCGAAG AAAATATCACAAAGAGGATTTAAATTATTACATTTTGAAATATTCAAAAT TGCTTGCTTGTTTGCTCTCTTGCTGAGCTTGACATTATATGTGGCATGTA ATATCATGGTAATTAATGTTTTTGTTTGGTGTATTATTGCCAGTTAAAGT TAAATTATTTTTTGTTTTCCACCCTAATTAATGTTTATGTATTATTGTGA TACATAGATATTAGAGATATTGTGCTGATGGTTGATACTGTTATTTGTTC ATTTTGATTAGGTAATGATATCTGGTAAAGACGATCCTGATTCCTCTCTT CCTCCTGCTGTGGATGGCTTATTGAGGGTTCATAAGAGGATTATTGATGG TTTGGAGAGTGATTTTACCCACACACCTTCAGGTGCAGCCGGGAAGGTTT CTACTAAACTTCTAGTGGCAGCCTCTCAAGCGGGAAGTTTAATTGGGAAG CAAGGAGGAACTGTAAAATCTATCCAAGAAGCGTCCAATTGTATTGTTAG AGTTCTTGGAGCAGGTTCTTACTCTTTTTTATATAACATTTTCCCATGTA GTTGTTACTTTTGCGTTATTGTCTTTATTCATTATTTTAGAATTCGGTAT TTTCATGGATTTCATTTTGGTTTTTATTATTTGAACATGATTTTAAGCCA TGATTTACAATCTAATTATAGATTAAGCCATGATTTTGGTTTCAAAAGAT TGTTACAATCTAATTATAGTTTTCAAAACATTCTGGAATCTTCGTTGTCT ATCCTTAACTGAACATTATTGCAGGAACAGTTTACTGGAGTGGTATGAAC GAATTATGGAGAAAATAATATCTATTACTATGTTCTGATTTATGCTTTCA AATATAGTATTTTTGAAGATTTGAAGCTCTTTTCCAATCTTTGCATTTTG GTCCGTTGGTGGGCTGTTTGACATTCTGTAGTTGATAACCATCTGCATCG TCTTTCTCTTCTGCAGAAGACCTCCCAATTTTTGCACTTCAAGATGACAG GGTGGTTGAAGTAGTAGGGGATGCTAATGGAGTACATAAGGCACTAGAGT TAATTGCTTCCCACCTAAGGAAGTTTTTAGTTGATCGTAGTGTAATTCCA ATTTTCGAAATAAATGTAAGTGTGATTTAACCTTACACTCGTGAAGAATA TTTCTTTATAATAAGACGCTAAATGCTTCTAAGAGCCTGTTTGTTTACAT TTTTTGAAGTAAAAATCTTTTTTAAAAATTTAGTGCTTGTTGAAAGTTTT GAAAGAATAGACGTTGAATAAATCAATTTTTTTTTATTATTTTGAGTAGC TTGTGAACAAAAGCTAACTATTTAAAATAAAAAAGTTCTTTTTATATTGT TACCAAATAGAAATAGCTTATACTTCACAAAATAATTCTAAACAAAAAAT TATTTTTTAATACATCCTTAAAATCACCTTTTTATTATAAAAATAACAAG CCATAAATTATTATTTCTCCAGATGCAAATAGCCAATCCCCATCACCCCG AGCACATGCCACCCCACCAATCTTGGGGTCCACCTCAGGGCCTTCCTCCA AATGCTGGTGGAGGTCCTGGTTTTGGACCTCCTTCTCAATACATGCCACC TCCAAGACAACTTGATAGTTATTATCCACCAGCCGAGATCCCTGTTGAAA GACAGCCCCATCAAGGTATATCTGCCTATGGAAGAGATGCTTCAATAGGC GTTCATGCATCTTCAAATGCTCAATCTGCACCTTCCGTAGTCACACAGGT ACTTGTGCTTCTTGGAAAATTGTATTGTAGTAATTCTCATAGAAAGCTGT AATTGTTCTTAGAAATTGTGGGTTTGTATTTGGTGGAAATTTGTTGACTG CCGTTTCTTCTATAACTGTTGTAAACCTAGCTGGTTAGTCACAATTTCCC ATTTAAGTTGATATGTAGCATTTCTTTTCAGGTTAGATTTAAGATAGCTG AAGATGATGCAAAATGCACAAAAACTTGGTTTTTTTGCTTAAATATTTAG CTAAACGAAGTATGTGAAATATCTTCTTCAGTTGTTTATTAGACATGGTT TCCTGTTTGGTTAGTAGTTTATGTTTGACATTAGATGGAACTGTGGGTGC AGGCAAACACTATTTGTGTAGCTATGTATTCTCGCATTTGGGGTTGGAGA ATATGCAATATATAAATATTACTTAGACTTGAGTTCCTGTTCTTTATAAA ATGTATTACTTTTTAATCACGATGAATTTTTTTTGCTATTTTGGCAGATC ACGCAGCAAATGCAAATTCCTCTATCGTATGCTGATGCTGTCATTGGAAC AGCAGGAGCAAGTATAAGCTACATCAGAAGAGCTAGTGGGGCTACTGTTA CCATACAAGAAGCAAGAGGTGTTCCTGGGGAGATGACAGTTGAAATCAGT GGAACTGCGTCTCAAGTCCAAACTGCTCAGCAACTGATACAGGTATTCTG ATCTTGGTCTTTTGATCAACATAAAAAAAATAATCTGTGCGATGCTGCAC GTCACGTAAAAATTCTATCTTATTAGTAGTGTGAAATTATTTTGTGAAAA GCTGTTTGCAGTGTTCATAGGGGACATAAAAATATTCATTGCGTTTGAGT TTCATCAAGATTAATCTTTATAACTAAAAGTGGAGAAAACTAGAAGCTGG TTAAATTTCAAAATTACAGTTATCGGTCACAAAGTATCGTCTCAATAAAA AATTGGGAGTAAAATTCTAATATATATTTTTCTTCCAATCTTCCTGTTCA CGCTCTCATTTCATTTTCAATCTTATTTTTGTTTCTGAAGAGAGGCTAAA GGTTTTTCTTAGTTTAATGCTAATCTTGCTGTATGTATTATAAGTCTGTT TGTGTTTTTAAGAAAAAAAGTATTTTGTAATAACGTAATTATTTATTTGC AAAATTTACATGTTTGGATAAACTTATTTAGAAAAGCAGAAGCAGGAAAA AAATAGAAAATTGTTTTGCTGCTGCTTCTTTTTTACATTCACTTTTTTAA TCACAAACAAATTCTATGTGATTGTTTGAACTGATTTAATGCATGTCTGG TAATACTTAAATTTAGGTAACAGTCGTTTATTTTTCAAAATTTCTCCCTG AGAAAGTTAAAATAAGTTCTCTTAAAAGAGTTGAACCAAACTTGCATTTG CCTCACGTGATTAGTCTGCATGGTAATCAAGCAATACAATTAATGAATGC CAATGTGGTGCAGAATTTCATGGCTGAAGCTGCAGCTGCAGCTGGTGGAG CACCGGCACAGCCGCAAGCAGGTGGGCCTGCTGTAGAGCAAGGATACAAT TCTTATCCTGCCCATGCTTCTGTCTATGCTTCTCCTCCTTCCAATCCAGG ACATGCTGGAGGCTATAGCTCCGTTTATGGTGCAAACTATGGCTACTAAG CTGGACAGTGCAACTAATGCTTCCACTATTTCAATGTAAAATTCTGGTAA CAGAATTAATGTAATAATTGATCAAATCTTAGATTCTTGTGTGACCCTTG TATTGTGTTGTACTCTTAGTCATTTGAAAGATTAAACATGCCACTGATGT ATCATCTACTTCTATGATTTTGTCTGATTGGTGCACCTACGTAGCGTCTT TGTTTTCTGAATTACTTGCTAAAGGAACTGCTAACAAGAGCTCAATTTAG TGTGTGGAGGATGTTATTTGTGAATGCCTACCAGACTTGGATTGCCTTAA ATC
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Coding sequence (CDS) from alignment at Chr06:21257514..21264116+

>Phvul.006G103100.1_Pv_G19833_v2.1 ID=Phvul.006G103100.1_Pv_G19833_v2.1; Name=Phvul.006G103100.1; organism=Phaseolus vulgaris; type=CDS; length=1323bp; location=Sequence derived from: Chr06:21257514..21264116+ (Phaseolus vulgaris
ATGGCTGAAGTGGATCAGAACACGAGCGCTGAGAATGATACGGAGGAAAC
AGTTGAGGCGGAATTGCAGGGTGGCGAGGAGGCGGTTGTTGCTGAGAAGA
GGTGGCCGGGGTGGCCTGGGGAGAGTGTGTTTCGGATGTTAGTTCCTGCG
CAGAAGGTTGGGGGCATAATCGGACGTAAAGGAGAGTTCATTAAGAAAAT
TGTGGAGGAGACTCGAGCTCGCGTTAAAATTCTTGATGGTCCTCCTGGAA
CTGCGCAAAGGGCTGTAATGATATCTGGTAAAGACGATCCTGATTCCTCT
CTTCCTCCTGCTGTGGATGGCTTATTGAGGGTTCATAAGAGGATTATTGA
TGGTTTGGAGAGTGATTTTACCCACACACCTTCAGGTGCAGCCGGGAAGG
TTTCTACTAAACTTCTAGTGGCAGCCTCTCAAGCGGGAAGTTTAATTGGG
AAGCAAGGAGGAACTGTAAAATCTATCCAAGAAGCGTCCAATTGTATTGT
TAGAGTTCTTGGAGCAGAAGACCTCCCAATTTTTGCACTTCAAGATGACA
GGGTGGTTGAAGTAGTAGGGGATGCTAATGGAGTACATAAGGCACTAGAG
TTAATTGCTTCCCACCTAAGGAAGTTTTTAGTTGATCGTAGTGTAATTCC
AATTTTCGAAATAAATATGCAAATAGCCAATCCCCATCACCCCGAGCACA
TGCCACCCCACCAATCTTGGGGTCCACCTCAGGGCCTTCCTCCAAATGCT
GGTGGAGGTCCTGGTTTTGGACCTCCTTCTCAATACATGCCACCTCCAAG
ACAACTTGATAGTTATTATCCACCAGCCGAGATCCCTGTTGAAAGACAGC
CCCATCAAGGTATATCTGCCTATGGAAGAGATGCTTCAATAGGCGTTCAT
GCATCTTCAAATGCTCAATCTGCACCTTCCGTAGTCACACAGATCACGCA
GCAAATGCAAATTCCTCTATCGTATGCTGATGCTGTCATTGGAACAGCAG
GAGCAAGTATAAGCTACATCAGAAGAGCTAGTGGGGCTACTGTTACCATA
CAAGAAGCAAGAGGTGTTCCTGGGGAGATGACAGTTGAAATCAGTGGAAC
TGCGTCTCAAGTCCAAACTGCTCAGCAACTGATACAGAATTTCATGGCTG
AAGCTGCAGCTGCAGCTGGTGGAGCACCGGCACAGCCGCAAGCAGGTGGG
CCTGCTGTAGAGCAAGGATACAATTCTTATCCTGCCCATGCTTCTGTCTA
TGCTTCTCCTCCTTCCAATCCAGGACATGCTGGAGGCTATAGCTCCGTTT
ATGGTGCAAACTATGGCTACTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003723RNA binding