Phvul.007G160700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP107_MOUSE (Protein GPR107 OS=Mus musculus OX=10090 GN=Gpr107 PE=1 SV=2) HSP 1 Score: 234.958 bits (598), Expect = 3.513e-70 Identity = 125/293 (42.66%), Postives = 185/293 (63.14%), Query Frame = 1 Query: 400 YSLFFANCA-----PETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLALWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 YSL+F C+ P S +++ + +P++ YLSAG+ LP L+ ++ +F +W ++ R + +IH LM AL K+L+L+ A D HY+ S G P GW V++YI ++ LLF I L+GTGW+F+K L +++KK+ MIVIPLQ+LANVA ++I T ++ W LVD++CC AI+FP+VWSIR L+E S TDGKAA NLAKL LFR +Y++++ Y+YFTRI+ F LK ++++W+ L +ETA+L F+V+ Y FRP N Y L Sbjct: 219 YSLYFHKCSGNNVKPGEQASFSLNIAITEKNPNS---YLSAGEIPLPKLYVSMALFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKAAINLAKLRLFRHYYVLIVCYIYFTRIIAFLLKFAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPYLQL 508
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP107_HUMAN (Protein GPR107 OS=Homo sapiens OX=9606 GN=GPR107 PE=1 SV=1) HSP 1 Score: 215.698 bits (548), Expect = 2.211e-62 Identity = 130/342 (38.01%), Postives = 188/342 (54.97%), Query Frame = 1 Query: 400 YSLFFANCA----PETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLA--LWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGK------------------------------------------------AARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 YSL+F C P + ++ E+ +PD+ YLSAG+ LP L+ S+A+F FL+ +W ++ R + +IH LM AL K+L+L+ A D HY+ S G P GW V++YI ++ LLF I L+GTGW+F+K L +++KK+ MIVIPLQ+LANVA ++I T ++ W LVD++CC AI+FP+VWSIR L+E S TDGK AA NLAKL LFR +Y++++ Y+YFTRI+ F LK ++++W+ L +ETA+L F+V+ Y FRP N Y L Sbjct: 221 YSLYFHKCLGKELPSDKFTFSLDIEITEKNPDS---YLSAGEIPLPKLYI--SMAFFFFLSGTIWIHILRKRRNDVFKIHWLMAALPFTKSLSLVFHAIDYHYISSQGFPIEGWAVVYYITHLLKGALLFITIALIGTGWAFIKHILSDKDKKIFMIVIPLQVLANVAYIIIESTEEGTTEYGLWKDSLFLVDLLCCGAILFPVVWSIRHLQEASATDGKGDSMGPLQQRANLRAGSRIESHHFAQADLELLASSCPPASVSQRAGITAAINLAKLKLFRHYYVLIVCYIYFTRIIAFLLKLAVPFQWKWLYQLLDETATLVFFVLTGYKFRPASDNPYLQL 557
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP108_HUMAN (Protein GPR108 OS=Homo sapiens OX=9606 GN=GPR108 PE=2 SV=3) HSP 1 Score: 210.305 bits (534), Expect = 6.574e-61 Identity = 124/309 (40.13%), Postives = 182/309 (58.90%), Query Frame = 1 Query: 361 SINRTFPVTIANE-----YSLFFANC---APETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLALWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 S N +F V I ++ YSL F NC P + + +PD +LSA + L L+ V S + A W + N S+ +IH LM AL K+++LL + + +++ S G P G V++YI ++ LLF I L+G+GW+F+K L ++EKKV IVIP+Q+LANVA ++I D+V W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y+YFTRI+ L+ +++QW+ L E ++LAF+V+ Y F+P N Y L Sbjct: 202 SYNFSFHVVIGSQAEEGQYSLNFHNCNNSVPGKEHPFDITVMIREKNPD---GFLSAAEMPLFKLYMVMSACFLAAGIFWVSILCRNTYSVFKIHWLMAALAFTKSISLLFHSINYYFINSQGHPIEGLAVMYYIAHLLKGALLFITIALIGSGWAFIKYVLSDKEKKVFGIVIPMQVLANVAYIIIESREEGASDYVLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYVYFTRIIAILLQVAVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPTGNNPYLQL 507
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP108_RAT (Protein GPR108 OS=Rattus norvegicus OX=10116 GN=Gpr108 PE=2 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 9.074e-59 Identity = 121/309 (39.16%), Postives = 181/309 (58.58%), Query Frame = 1 Query: 361 SINRTFPVTIAN-----EYSLFFANC---APETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLALWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 S N +F + I + +YSL F NC P + + +P+ +LSA + L L+ + S + A W + N S+ +IH LM AL K+++LL + + +++ S G P G V+ YI ++ LLF I L+G+GW+F+K L ++EKK+ IVIPLQ+LANVA +VI D+ W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y+YFTRI+ L+ +++QW+ L E+++LAF+V+ Y F+P N Y L Sbjct: 235 SYNFSFHIVIGSRAEEGQYSLNFHNCYNTIPGQEQPFDLTVMIREKNPE---GFLSAAEIPLFKLYLIMSACFLAAGIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAMNLAKLKLFRHYYVMVICYIYFTRIIAILLRVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPYLQL 540
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP108_BOVIN (Protein GPR108 OS=Bos taurus OX=9913 GN=GPR108 PE=2 SV=1) HSP 1 Score: 202.601 bits (514), Expect = 5.462e-58 Identity = 119/309 (38.51%), Postives = 179/309 (57.93%), Query Frame = 1 Query: 361 SINRTFPVTIAN-----EYSLFFANC---APETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLALWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 S N +F V I + +Y+L F NC P + + +P+ YLSA + L L+ V S + W + N ++ +IH LM AL K+++LL + + +++ S G P G V+ YI ++ LLF I L+G+GW+F+K L ++EKK+ IVIPLQ+LANVA +V+ D+ W ++ LVD+ICC I+FP+VWSIR L++ S TDGK A NLAKL LFR +Y++VI Y+YFTRI+ L+ + +++QW+ L E ++LAF+V+ Y F+P N Y L Sbjct: 207 SYNFSFHVVIGSRAEEGQYNLNFHNCDNSVPGREQPFDITVMIREKNPE---GYLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDNPYLQL 512
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Match: GP108_MOUSE (Protein GPR108 OS=Mus musculus OX=10090 GN=Gpr108 PE=1 SV=1) HSP 1 Score: 202.986 bits (515), Expect = 6.164e-58 Identity = 120/309 (38.83%), Postives = 182/309 (58.90%), Query Frame = 1 Query: 361 SINRTFPVTIAN-----EYSLFFANCA---PETSVSMAVHTELYNLDPDTSRDYLSAGQTQLPSLFFVFSVAYFAFLALWFYLCHSNRRSLHRIHXXXXXXXXXXXXXXXXXXEDKHYVKSTGTP-HGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVL 1260 S N +F + I++ +YSL F NC P + + +P+ +LSA + L L+ + S + A W + N S+ +IH LM AL K+++LL + + +++ S G P G V+ YI ++ LLF I L+G+GW+F+K L ++EKK+ IVIPLQ+LANVA +VI D+ W ++ LVD+ICC AI+FP+VWSIR L++ S TDGK A NLA+L LFR +Y++VI Y+YFTRI+ L+ +++QW+ L E+++LAF+V+ Y F+P N Y L Sbjct: 228 SYNFSFHIVISSRAEEGQYSLNFHNCHNSIPGQEQPFDLTVMIREKNPE---GFLSAAEIPLFKLYLIMSACFLAADIFWVSVLCKNTYSVFKIHWLMAALAFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYMLSDKEKKIFGIVIPLQVLANVAYIVIESREEGASDYGLWKEILFLVDLICCGAILFPVVWSIRHLQDASGTDGKVAVNLARLKLFRHYYVMVICYIYFTRIIAILLQVAVPFQWQWLYQLLVESSTLAFFVLTGYKFQPAGDNPYLQL 533 The following BLAST results are available for this feature:
BLAST of Phvul.007G160700.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 6
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.007G160700.1_Pv_G19833_v2.1 >Phvul.007G160700.1_Pv_G19833_v2.1 ID=Phvul.007G160700.1_Pv_G19833_v2.1; Name=Phvul.007G160700.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=440bpback to top mRNA from alignment at Chr07:27177125..27179717+ Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.007G160700.1_Pv_G19833_v2.1 ID=Phvul.007G160700.1_Pv_G19833_v2.1; Name=Phvul.007G160700.1; organism=Phaseolus vulgaris; type=mRNA; length=2593bp; location=Sequence derived from: Chr07:27177125..27179717+ (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr07:27177125..27179717+ >Phvul.007G160700.1_Pv_G19833_v2.1 ID=Phvul.007G160700.1_Pv_G19833_v2.1; Name=Phvul.007G160700.1; organism=Phaseolus vulgaris; type=CDS; length=1320bp; location=Sequence derived from: Chr07:27177125..27179717+ (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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