Phvul.007G193700.1
Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Gene/transcripts from the same species that appear to represent the same gene Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF92_ARATH (Ethylene-responsive transcription factor 1B OS=Arabidopsis thaliana OX=3702 GN=ERF1B PE=1 SV=2) HSP 1 Score: 142.51 bits (358), Expect = 2.980e-41 Identity = 87/167 (52.10%), Postives = 116/167 (69.46%), Query Frame = 1 Query: 118 FDMVDFSTAQA--QGNHNQMVVKTEELENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVKRVKESLQEIQYSCFSGSSPALALKERHCIRRXXXXXXXXXXXXXXXEDPTQSVVVLEDLGVDYLEHLLSISDQS 612 + +++ ST Q + + +K+ E+SY+GVR+RPWGK+AAEIRD+TRNG RVWLGTF+SAE AALAYDQAAFSMRG +A+LNF +RV+ESL EI+Y+ G SP +ALK +H +RR++++K K D +VVV EDLG YLE LL S+ S Sbjct: 49 YGLIEQSTQQTYIDSDSQDLPIKSVSSRKSEKSYRGVRRRPWGKFAAEIRDSTRNGIRVWLGTFESAEEAALAYDQAAFSMRGSSAILNFSAERVQESLSEIKYTYEDGCSPVVALKRKHSMRRRMTNKKTKDSDFDHRSVKLDNVVVFEDLGEQYLEELLGSSENS 215
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF93_ARATH (Ethylene-responsive transcription factor 15 OS=Arabidopsis thaliana OX=3702 GN=ERF15 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 4.110e-30 Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 1 Query: 160 HNQMVVKTEELE----NKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVKRVKESLQEIQ-YSCFSGSSPALALKERHCIRR-------------------------XXXXXXXXXXXXXXXEDPTQSVVVLEDLGVDYLEHLL 594 N V +EE E ++ERSY+GVRKRPWGK+AAEIRD+TRNG RVWLGTFD AE AALAYDQAAF+ +G A LNFPV+ V+ESL++++ + G SP +ALK +H +R SS ++ + + + ++VV EDLG +YLE LL Sbjct: 65 QNGDVSNSEEEEKVGIDEERSYRGVRKRPWGKFAAEIRDSTRNGIRVWLGTFDKAEEAALAYDQAAFATKGSLATLNFPVEVVRESLKKMENVNLHDGGSPVMALKRKHSLRNRPRGKKRSSSSSSSSSNSSSCSSSSSTSSTSRSSSKQSVVKQESGTLVVFEDLGAEYLEQLL 239
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF94_ARATH (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 6.018e-27 Identity = 72/161 (44.72%), Postives = 98/161 (60.87%), Query Frame = 1 Query: 205 RSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVKRVKESLQEIQ-YSCFSGSSPALALKERHCIRR------------------------------XXXXXXXXXXXXXXXEDPTQSVVVLEDLGVDYLEHLL 594 +SY+GVRKRPWGK+AAEIRD+TR G RVWLGTFD+AEAAALAYDQAAF+++G AVLNFP V+ESL++++ + G SP +ALK +H +R S + + +++ ++VVLEDLG +YLE L+ Sbjct: 80 KSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFALKGSLAVLNFPADVVEESLRKMENVNLNDGESPVIALKRKHSMRNRPRGKKKSSSSSTLTSSPSSSSSYSSSSSSSSLSSRSRKQSVVMTQESNTTLVVLEDLGAEYLEELM 240
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana OX=3702 GN=ERF105 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 5.808e-20 Identity = 44/69 (63.77%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 193 ENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVKRVK 399 EN +R Y+GVR+RPWGKYAAEIRD + G RVWLGTFD+A AA YD+AAF +RG A+LNFP++ K Sbjct: 66 ENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGK 134
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: PTI5_SOLLC (Pathogenesis-related genes transcriptional activator PTI5 OS=Solanum lycopersicum OX=4081 GN=PTI5 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.032e-19 Identity = 49/79 (62.03%), Postives = 61/79 (77.22%), Query Frame = 1 Query: 205 RSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVKRVKESLQEIQYSCFSGS 441 + Y+GVR+RPWGKYAAEIRD+ R+G RVWLGTF++AE AALAYD+AAF MRG A+LNFP + V S+ + S S S Sbjct: 57 KKYRGVRRRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPSEIVNASVSVDKLSLCSNS 135
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF95_ARATH (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.553e-19 Identity = 46/69 (66.67%), Postives = 54/69 (78.26%), Query Frame = 1 Query: 178 KTEELENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFP 384 + E E Y+GVRKRPWGKYAAEIRD+ R+G RVWLGTF++AE AA AYD+AAF MRG A+LNFP Sbjct: 3 RIESYNTNEMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNFP 71
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 6.722e-19 Identity = 42/64 (65.62%), Postives = 57/64 (89.06%), Query Frame = 1 Query: 193 ENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFP 384 ++K+ ++GVR+RPWGK+AAEIRD +RNG R+WLGTF++AE AA AYD+AAF++RGH A+LNFP Sbjct: 14 DDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFP 77
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana OX=3702 GN=ERF6 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 7.471e-19 Identity = 48/88 (54.55%), Postives = 61/88 (69.32%), Query Frame = 1 Query: 127 VDFSTAQAQGNHNQMVVKTEELENKERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPVK 390 + F+T + VV EE +R Y+GVR RPWGK+AAEIRD TR GTRVWLGTF++A AA AYD+ AF +RG A+LNFP++ Sbjct: 113 IQFATGNPKPELPVPVVAAEE----KRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLE 196
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana OX=3702 GN=ERF106 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.565e-19 Identity = 45/77 (58.44%), Postives = 56/77 (72.73%), Query Frame = 1 Query: 163 NQMVVKTEELENK--ERSYKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFPV 387 +Q V K E E + R Y+GVR+RPWGK+AAEIRD + G+R+WLGTF+S AA AYD AAF +RG AVLNFP+ Sbjct: 92 DQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPL 168
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Match: ERF96_ARATH (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.082e-18 Identity = 44/58 (75.86%), Postives = 52/58 (89.66%), Query Frame = 1 Query: 211 YKGVRKRPWGKYAAEIRDTTRNGTRVWLGTFDSXXXXXXXXXXXXFSMRGHNAVLNFP 384 Y+GVR+RPWGKYAAEIRD+ ++G RVWLGTFD+AE AA AYDQAA+SMRG A+LNFP Sbjct: 15 YRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEAARAYDQAAYSMRGQAAILNFP 72 The following BLAST results are available for this feature:
BLAST of Phvul.007G193700.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot) Total hits: 10
InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
Sequences
The
following sequences are available for this feature:
protein sequence of Phvul.007G193700.1_Pv_G19833_v2.1 >Phvul.007G193700.1_Pv_G19833_v2.1 ID=Phvul.007G193700.1_Pv_G19833_v2.1; Name=Phvul.007G193700.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=212bpback to top mRNA from alignment at Chr07:31554975..31555610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>Phvul.007G193700.1_Pv_G19833_v2.1 ID=Phvul.007G193700.1_Pv_G19833_v2.1; Name=Phvul.007G193700.1; organism=Phaseolus vulgaris; type=mRNA; length=636bp; location=Sequence derived from: Chr07:31554975..31555610- (Phaseolus vulgarisback to top Coding sequence (CDS) from alignment at Chr07:31554975..31555610- >Phvul.007G193700.1_Pv_G19833_v2.1 ID=Phvul.007G193700.1_Pv_G19833_v2.1; Name=Phvul.007G193700.1; organism=Phaseolus vulgaris; type=CDS; length=636bp; location=Sequence derived from: Chr07:31554975..31555610- (Phaseolus vulgarisback to top Annotated Terms
The
following terms have been associated with
this mRNA:
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