Phvul.007G222600.1

Transcript Overview
NamePhvul.007G222600.1
Unique NamePhvul.007G222600.1_Pv_G19833_v2.1
TypemRNA
OrganismPhaseolus vulgaris (Common bean)
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr07supercontigChr07:34595136..34596523 -Phaseolus vulgaris G19833 genome v2.1n/a
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Phaseolus vulgaris G19833 genome v2.12019-09-17
InterProScan: Phaseolus vulgaris G19833 genome v2.12019-10-18
BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot2019-10-18
Orthologs

Syntenic blocks
Syntentic blockAssemblySpecies
pvpvL033Phaseolus vulgaris G19833 genome v2.1Phaseolus vulgaris
pspvL237Pisum sativum Cameor genome v1aPisum sativum
pspvL241Pisum sativum Cameor genome v1aPisum sativum
pspvL673Pisum sativum Cameor genome v1aPisum sativum
pvvuR580Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
pvvuR627Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
caipvL0313Cicer arietinum ICC 4958 genome v2Cicer arietinum
caipvL0486Cicer arietinum ICC 4958 genome v2Cicer arietinum
capvL248Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
capvL389Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
ccpvL0768Cajanus cajan Asha genome v1.0Cajanus cajan
anpvL0789Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL0808Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1047Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1054Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1315Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
anpvL1395Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
aspvL169Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL463Vigna angularis Jingnong 6 genome v1.1Vigna angularis
aspvL545Vigna angularis Jingnong 6 genome v1.1Vigna angularis
pvzwsR547Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvzwsR603Pisum sativum cv. Zhongwan6 genome v1.0Pisum sativum
pvvfhR638Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvvfhR676Vicia faba inbred line Hedin/2 genome v1.0Vicia faba
pvtifR627Vicia faba cv. Tiffany genome v1.0Vicia faba
pvtifR664Vicia faba cv. Tiffany genome v1.0Vicia faba
pvvrvR552Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvrvR603Vigna radiata cv. VC1973A genome v6.0Vigna radiata
pvvuaR510Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvuaR551Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
pvvssR694Vicia sativa cv. Studenica genome v1.0Vicia sativa
pvvssR726Vicia sativa cv. Studenica genome v1.0Vicia sativa
canpvL078Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL234Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
canpvL358Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
avjpvL103Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL428Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
avjpvL517Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
carpvL080Cicer arietinum
carpvL241Cicer arietinum
carpvL371Cicer arietinum
ccapvL147Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL322Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL400Cajanus cajan cv. Asha genome v2.0Cajanus cajan
ccapvL497Cajanus cajan cv. Asha genome v2.0Cajanus cajan
pvvumR643Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvumR716Vigna umbellata FF25 genome v1.0Vigna umbellata
pvvvaR665Vicia villosa cv. AU Merit genome v1.0Vicia villosa
pvvasR672Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvasR691Vigna angularis cv. Shumari genome v1.a1Vigna angularis
pvvstR676Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvvstR692Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
pvpvfR535Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvpvfR570Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
pvvunR535Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
pvvunR578Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata

Orthologs
Gene/TranscriptAssemblySpecies
evm.model.Chr07.2192Vigna unguiculata subsp. sesquipedalis line A147 genome v1.0Vigna unguiculata subsp. sesquipedalis
Ca_07831.1Cicer arietinum ICC 4958 genome v2Cicer arietinum
Vigun07g068100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.2Vigna unguiculata
rna-KK1_006466Cajanus cajan Asha genome v1.0Cajanus cajan
Vigun07g068100.1Vigna unguiculata L. Walp IT97K-499-35 genome v1.1Vigna unguiculata
Psat3g035520.1Pisum sativum Cameor genome v1aPisum sativum
Vigst.08G200000.01Vigna stipulacea acc. JP252948 genome v2.a1Vigna stipulacea
Vum_08G02115.1Vigna umbellata FF25 genome v1.0Vigna umbellata
Vigan.08G282100.01Vigna angularis cv. Shumari genome v1.a1Vigna angularis
Ca_00768Cicer arietinum CDC Frontier genome v1.0Cicer arietinum
Va03G074490.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-XM_014640171.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
rna-XM_004494851.3Cicer arietinum CDC Frontier NCBI RefSeq v1Cicer arietinum
LR48_mrnaVigan02g082000Vigna angularis Jingnong 6 genome v1.1Vigna angularis
rna-XM_014657754.2Vigna radiata cv. VC1973A genome v6.0Vigna radiata
Va02G020730.1Vigna angularis cv. Jingnong6 genome v1.7.1Vigna angularis
rna-TanjilR_20479Lupinus angustifolius L. Tanjil genome v1.0Lupinus angustifolius
Cc_v2.0_02988.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan
Cc_v2.0_07873.1Cajanus cajan cv. Asha genome v2.0Cajanus cajan

Gene/transcripts from the same species that appear to represent the same gene
Gene/TranscriptAssemblySpecies
PvulFLAVERTChr07.1001393Phaseolus vulgaris cv. Flavert genome v1.0Phaseolus vulgaris
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Phvul.007G222600Phvul.007G222600_Pv_G19833_v2.1Phaseolus vulgarisgene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G222600.1Phvul.007G222600.1_Pv_G19833_v2.1-proteinPhaseolus vulgarispolypeptide
Phvul.007G222600.1_Pv_G19833_v2.1Phvul.007G222600.1_Pv_G19833_v2.1Phaseolus vulgarispolypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G222600.1.v2.1.CDS.2Phvul.007G222600.1.v2.1.CDS.2_Pv_G19833_v2.1Phaseolus vulgarisCDS
Phvul.007G222600.1.v2.1.CDS.1Phvul.007G222600.1.v2.1.CDS.1_Pv_G19833_v2.1Phaseolus vulgarisCDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G222600.1.v2.1.three_prime_UTR.1Phvul.007G222600.1.v2.1.three_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgaristhree_prime_UTR


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
Phvul.007G222600.1.v2.1.five_prime_UTR.1Phvul.007G222600.1.v2.1.five_prime_UTR.1_Pv_G19833_v2.1Phaseolus vulgarisfive_prime_UTR


Homology
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: ERF24_ARATH (Ethylene-responsive transcription factor ERF024 OS=Arabidopsis thaliana OX=3702 GN=ERF024 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.139e-31
Identity = 104/173 (60.12%), Postives = 123/173 (71.10%), Query Frame = 1
Query:  139 YRGVRRRSNG-KWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYNSSGLQENQAGMSNQ----FVDEDLIFDMPNVLVNMAQGMLLSPP---PFDIGLEPNS-PENIEHETSLWNFP 630
            YRGVR+R N  KWVSEIREP+KPNRIWLGTF TPEMAA+AYDVAA ALKG  AELNFP+S SSLP P S+S  DIQ AAA+AA A GAA+DA+     N  +SG+    +   N     F+DEDL+FDMPNVL+NMA+GMLLSPP    FD   + +  P   ++   LWNFP
Sbjct:   15 YRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDY---LWNFP 184          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: ERF25_ARATH (Ethylene-responsive transcription factor ERF025 OS=Arabidopsis thaliana OX=3702 GN=ERF025 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 4.501e-25
Identity = 84/177 (47.46%), Postives = 108/177 (61.02%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYNSSGLQENQAG------------MSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDI--GLEPNSPENIEHETSLWNF 627
            +RG+R R NGKWVSEIREP+K  RIWLGT+P PEMAA AYDVAA ALKG DA LNFP  A +   P S SA DI+ AA+ AA         M+ P    +   L+  Q G             S +F+DE+ + +MP +L  MA+GML+SPP   I   +E +SPEN E + +LW++
Sbjct:   65 FRGIRLR-NGKWVSEIREPRKTTRIWLGTYPVPEMAAAAYDVAALALKGPDAVLNFPGLALTYVAPVSNSAADIRAAASRAAE--------MKQPDQGGDEKVLEPVQPGKEEELEEVSCNSCSLEFMDEEAMLNMPTLLTEMAEGMLMSPPRMMIHPTMEDDSPENHEGD-NLWSY 231          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: ERF26_ARATH (Ethylene-responsive transcription factor ERF026 OS=Arabidopsis thaliana OX=3702 GN=ERF026 PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 8.883e-24
Identity = 86/163 (52.76%), Postives = 109/163 (66.87%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYNSSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNF 627
            YRG+R RS GKWVSEIREPKK  R+WLGT+PTPEMAA AYDVAA ALKG D  LNFPDS  S P+P S SA  I+ AAAAAA   GAA  A++   G      + +     +  FVDE+ + +MP +L +MA+GM+++PP        +SPEN + E SLW++
Sbjct:   90 YRGIRCRS-GKWVSEIREPKKTTRVWLGTYPTPEMAAAAYDVAALALKGGDTLLNFPDSLGSYPIPLSSSAAHIRCAAAAAAATRGAAGAAVK--VGQKKEDKVYDTAESSTMGFVDEEELLNMPGLLADMAKGMMVAPPWMGSPPSDDSPENSDGE-SLWSY 248          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1F_ORYSJ (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. japonica OX=39947 GN=DREB1F PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.553e-23
Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 1
Query:  139 YRGVRRRSNG-KWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKG-KDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTG---NYNSSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPP 558
            YRGVR R+ G +WV E+REP+   RIWLGT+PTPEMAA A+DVAA AL+G + AELNFPDS S+LP   + S  DI++AAA AA         +  P       +  G        +  FVDED IFDMP ++ +MA+GM+L+PP
Sbjct:   47 YRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLTPP 191          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1F_ORYSI (Dehydration-responsive element-binding protein 1F OS=Oryza sativa subsp. indica OX=39946 GN=DREB1F PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.553e-23
Identity = 72/145 (49.66%), Postives = 93/145 (64.14%), Query Frame = 1
Query:  139 YRGVRRRSNG-KWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKG-KDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTG---NYNSSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPP 558
            YRGVR R+ G +WV E+REP+   RIWLGT+PTPEMAA A+DVAA AL+G + AELNFPDS S+LP   + S  DI++AAA AA         +  P       +  G        +  FVDED IFDMP ++ +MA+GM+L+PP
Sbjct:   47 YRGVRARAGGSRWVCEVREPQAQARIWLGTYPTPEMAARAHDVAAIALRGERGAELNFPDSPSTLPRARTASPEDIRLAAAQAAELYRRPPPPLALPEDPQEGTSGGGATATSGRPAAVFVDEDAIFDMPGLIDDMARGMMLTPP 191          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1B_ARATH (Dehydration-responsive element-binding protein 1B OS=Arabidopsis thaliana OX=3702 GN=DREB1B PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.668e-23
Identity = 76/170 (44.71%), Postives = 100/170 (58.82%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYN-------SSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNF 627
            YRGVR+R++GKWVSE+REP K  RIWLGTF T EMAA A+DVAA AL+G+ A LNF DSA  L +P S  A+DIQ   AAA  A     +   T T N+           +   +      ++DE+ +F MP +L NMA+GMLL PP   +    N     + + SLW++
Sbjct:   48 YRGVRQRNSGKWVSEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQ--KAAAEAALAFQDETCDTTTTNHGLDMEETMVEAIYTPEQSEGAFYMDEETMFGMPTLLDNMAEGMLLPPP--SVQWNHNYDGEGDGDVSLWSY 213          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1D_ARATH (Dehydration-responsive element-binding protein 1D OS=Arabidopsis thaliana OX=3702 GN=DREB1D PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.184e-22
Identity = 75/172 (43.60%), Postives = 104/172 (60.47%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPT----GNYNSSGLQENQAGMSNQ-----FVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNF 627
            YRGVR+R++GKWV E+REP K +RIWLGTFPT EMAA A+DVAA AL+G+ A LNF DSA  L +P +   ++IQ AA+ AA A         + T          G++E +     Q     ++D++ +  MPN   NMA+GMLL PP  ++G   N  + +  + SLW+F
Sbjct:   54 YRGVRQRNSGKWVCEVREPNKKSRIWLGTFPTVEMAARAHDVAALALRGRSACLNFADSAWRLRIPETTCPKEIQKAASEAAMAFQNETTTEGSKTAAEAEEAAGEGVREGERRAEEQNGGVFYMDDEALLGMPNFFENMAEGMLLPPP--EVGWNHNDFDGV-GDVSLWSF 222          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1A_ARATH (Dehydration-responsive element-binding protein 1A OS=Arabidopsis thaliana OX=3702 GN=DREB1A PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 1.872e-21
Identity = 74/170 (43.53%), Postives = 103/170 (60.59%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYN-------SSGLQENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNF 627
            YRGVRRR++GKWV E+REP K  RIWLGTF T EMAA A+DVAA AL+G+ A LNF DSA  L +P S  A+DIQ    AAA AA A +D M   T ++           +   +   +  ++ ++ +F+MP++L NMA+GMLL  P        +  +  + + SLW++
Sbjct:   51 YRGVRRRNSGKWVCEVREPNKKTRIWLGTFQTAEMAARAHDVAALALRGRSACLNFADSAWRLRIPESTCAKDIQ---KAAAEAALAFQDEMCDATTDHGFDMEETLVEAIYTAEQSENAFYMHDEAMFEMPSLLANMAEGMLLPLPSVQWN-HNHEVDGDDDDVSLWSY 216          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: ERF27_ARATH (Ethylene-responsive transcription factor ERF027 OS=Arabidopsis thaliana OX=3702 GN=ERF027 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 2.316e-20
Identity = 75/177 (42.37%), Postives = 104/177 (58.76%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDX--------XXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYNSSGLQENQAGMSN----QFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEP--NSPENIEHETSLWNF 627
            YRG+R RS GKWVSEIREP+K  RIWLGT+P  EMAA AYDVAA ALKG++A LNFP S        ++S     + +A    M           AK+   + + +       +N  G S+    +F+DE+ + +MPN+L NMA+GM+++PP + +G  P  +SPEN   E  LW +
Sbjct:   19 YRGIRCRS-GKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSW-MGSRPSDDSPENSNDE-DLWGY 192          
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Match: DRE1C_ARATH (Dehydration-responsive element-binding protein 1C OS=Arabidopsis thaliana OX=3702 GN=DREB1C PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.302e-19
Identity = 73/171 (42.69%), Postives = 101/171 (59.06%), Query Frame = 1
Query:  139 YRGVRRRSNGKWVSEIREPKKPNRIWLGTFPTPEMXXXXXXXXXXXLKGKDAELNFPDXXXXXXXXXXXXXRDIQMXXXXXXXXXXXXKDAMQTPTGNYNSSGLQEN--------QAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENIEHETSLWNF 627
            YRGVR+R++GKWV E+REP K  RIWLGTF T EMAA A+DVAA AL+G+ A LNF DSA  L +P S  A++IQ    AAA AA   +D M   T + +   ++E         +      ++DE+ +  M ++L NMA+GMLL  P   +    N     + + SLW++
Sbjct:   51 YRGVRQRNSGKWVCELREPNKKTRIWLGTFQTAEMAARAHDVAAIALRGRSACLNFADSAWRLRIPESTCAKEIQ---KAAAEAALNFQDEMCHMTTDAHGLDMEETLVEAIYTPEQSQDAFYMDEEAMLGMSSLLDNMAEGMLLPSP--SVQWNYNFDVEGDDDVSLWSY 216          
The following BLAST results are available for this feature:
BLAST of Phvul.007G222600.1 vs. DB:Swiss
Analysis Date: 2019-10-18 (BLAST: Phaseolus vulgaris G19833 genome v2.1 vs. Swissprot)
Total hits: 10
Match NameE-valueIdentityDescription
ERF24_ARATH1.139e-3160.12Ethylene-responsive transcription factor ERF024 OS... [more]
ERF25_ARATH4.501e-2547.46Ethylene-responsive transcription factor ERF025 OS... [more]
ERF26_ARATH8.883e-2452.76Ethylene-responsive transcription factor ERF026 OS... [more]
DRE1F_ORYSJ3.553e-2349.66Dehydration-responsive element-binding protein 1F ... [more]
DRE1F_ORYSI3.553e-2349.66Dehydration-responsive element-binding protein 1F ... [more]
DRE1B_ARATH6.668e-2344.71Dehydration-responsive element-binding protein 1B ... [more]
DRE1D_ARATH2.184e-2243.60Dehydration-responsive element-binding protein 1D ... [more]
DRE1A_ARATH1.872e-2143.53Dehydration-responsive element-binding protein 1A ... [more]
ERF27_ARATH2.316e-2042.37Ethylene-responsive transcription factor ERF027 OS... [more]
DRE1C_ARATH1.302e-1942.69Dehydration-responsive element-binding protein 1C ... [more]
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InterPro
Analysis Name: InterProScan: Phaseolus vulgaris G19833 genome v2.1
Date Performed: 2019-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001471AP2/ERF domainPRINTSPR00367ETHRSPELEMNTcoord: 47..58
score: 64.85
coord: 85..105
score: 54.2
IPR001471AP2/ERF domainSMARTSM00380rav1_2coord: 46..109
e-value: 1.2E-33
score: 127.8
IPR001471AP2/ERF domainPFAMPF00847AP2coord: 46..95
e-value: 3.9E-10
score: 39.8
IPR001471AP2/ERF domainPROSITEPS51032AP2_ERFcoord: 46..103
score: 23.117
IPR001471AP2/ERF domainCDDcd00018AP2coord: 46..105
e-value: 4.41625E-21
score: 80.7787
IPR036955AP2/ERF domain superfamilyGENE3D3.30.730.10coord: 45..105
e-value: 6.9E-28
score: 98.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..52
IPR016177DNA-binding domain superfamilySUPERFAMILY54171DNA-binding domaincoord: 46..105

Sequences
The following sequences are available for this feature:

protein sequence of Phvul.007G222600.1_Pv_G19833_v2.1

>Phvul.007G222600.1_Pv_G19833_v2.1 ID=Phvul.007G222600.1_Pv_G19833_v2.1; Name=Phvul.007G222600.1_Pv_G19833_v2.1; organism=Phaseolus vulgaris; type=polypeptide; length=211bp
MASLNCHQLSLATHTFTHHIDNTTTTTAMYSNNATGSSRASSGTGRYRGV
RRRSNGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAAYALKGKDAEL
NFPDSASSLPVPASLSARDIQMAAAAAAGAAGAAKDAMQTPTGNYNSSGL
QENQAGMSNQFVDEDLIFDMPNVLVNMAQGMLLSPPPFDIGLEPNSPENI
EHETSLWNFP*
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mRNA from alignment at Chr07:34595136..34596523-

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>Phvul.007G222600.1_Pv_G19833_v2.1 ID=Phvul.007G222600.1_Pv_G19833_v2.1; Name=Phvul.007G222600.1; organism=Phaseolus vulgaris; type=mRNA; length=1388bp; location=Sequence derived from: Chr07:34595136..34596523- (Phaseolus vulgaris
AACACGCTCTCCGACCCAGATATCAATCGTTGGCAAAGCCAAGCTGGATT ACACCCCAACCATTCACAGGCCGCAATTCAGAAACAACTGGTTTGCACTT TCCGCTACTTCTTCTCCAACCTTCGTTAAACTCACCTCCATAAATGGCTT CACTCAATTGCCATCAACTTTCACTCGCAACACACACCTTCACACACCAC ATAGACAATACCACCACTACCACCGCCATGTATTCTAATAATGCAACCGG CAGCAGCAGAGCCTCTTCCGGAACCGGCCGCTACCGCGGTGTCCGCCGTA GGAGCAACGGGAAATGGGTGTCTGAGATTCGTGAGCCCAAAAAGCCTAAC AGGATTTGGTTAGGCACATTCCCTACACCTGAAATGGCCGCAGTGGCTTA TGACGTGGCAGCTTATGCTCTCAAGGGTAAGAATATCATCAAAGGAAAAA TGTTTTTTTCTTTAACATTTTTTCATATTTAATTTTAGTATCTGTATATT CAGATTAAATACTTTTCAAATTTTAAAACGTACCTATATTTTAATTTTTT AAAAATATTAAATATTAAGTTGATGTGGAAAAAAAAGTCTAAATCAATCA TTTGAATGTATAAGAAATAAAACTAAGTTTGACAACAAATATTTTGGTTC ATTTCATTATTGTCTATACTATATCAATGTTTTCATGTGATACACCTTTT AGAAATATTATTATACATCTTCTAACAAAACATGATCTCAACTAAAAAAT GAAACTTAATTAGATTTATAATAATCATAATGTAGTTTATAATTTTTATT TTGTTTTCCTTAATGTCAATGTATTTACATACATATTGTATCTAATACAC GTATATATCATATCTGATACTAGGTAAGGACGCTGAGCTCAATTTCCCTG ACTCCGCTTCTTCCCTTCCTGTCCCCGCTTCACTCTCGGCGCGTGACATT CAGATGGCGGCAGCCGCTGCGGCGGGGGCTGCTGGAGCTGCGAAGGATGC TATGCAGACGCCAACAGGGAATTATAACTCTTCAGGGTTACAAGAGAACC AAGCAGGGATGAGTAACCAGTTCGTGGACGAGGATTTGATCTTTGACATG CCGAATGTTCTTGTCAATATGGCTCAAGGAATGCTGCTTAGTCCTCCTCC TTTTGACATTGGTTTGGAACCCAATAGCCCAGAAAACATCGAACATGAAA CAAGCCTGTGGAATTTCCCTTAACATATTCTAATTAAACCCTTTTATTAA ATTCAGCACTAGTATATATACAAGTTAAAGCTCTATATTAATGCTTGAAA TGCTAAAAAAGAGTGAAAAAGAGAGCAGAAAAGGTATCCTGTTATGAATT ATATGGGCGAACTCTCACATCAAATCTTTTGCTTGGCC
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Coding sequence (CDS) from alignment at Chr07:34595136..34596523-

>Phvul.007G222600.1_Pv_G19833_v2.1 ID=Phvul.007G222600.1_Pv_G19833_v2.1; Name=Phvul.007G222600.1; organism=Phaseolus vulgaris; type=CDS; length=633bp; location=Sequence derived from: Chr07:34595136..34596523- (Phaseolus vulgaris
ATGGCTTCACTCAATTGCCATCAACTTTCACTCGCAACACACACCTTCAC
ACACCACATAGACAATACCACCACTACCACCGCCATGTATTCTAATAATG
CAACCGGCAGCAGCAGAGCCTCTTCCGGAACCGGCCGCTACCGCGGTGTC
CGCCGTAGGAGCAACGGGAAATGGGTGTCTGAGATTCGTGAGCCCAAAAA
GCCTAACAGGATTTGGTTAGGCACATTCCCTACACCTGAAATGGCCGCAG
TGGCTTATGACGTGGCAGCTTATGCTCTCAAGGGTAAGGACGCTGAGCTC
AATTTCCCTGACTCCGCTTCTTCCCTTCCTGTCCCCGCTTCACTCTCGGC
GCGTGACATTCAGATGGCGGCAGCCGCTGCGGCGGGGGCTGCTGGAGCTG
CGAAGGATGCTATGCAGACGCCAACAGGGAATTATAACTCTTCAGGGTTA
CAAGAGAACCAAGCAGGGATGAGTAACCAGTTCGTGGACGAGGATTTGAT
CTTTGACATGCCGAATGTTCTTGTCAATATGGCTCAAGGAATGCTGCTTA
GTCCTCCTCCTTTTGACATTGGTTTGGAACCCAATAGCCCAGAAAACATC
GAACATGAAACAAGCCTGTGGAATTTCCCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR001471AP2/ERF_dom
IPR036955AP2/ERF_dom_sf
IPR016177DNA-bd_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of DNA-templated transcription